Journal of General and Applied Microbiology最新文献

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Extracellular ligninases production and lignin degradation by Paenibacillus polymyxa. 多粘菌(Paenibacillus polymyxa)产生胞外木质素酶并降解木质素。
IF 0.8 4区 生物学
Journal of General and Applied Microbiology Pub Date : 2024-07-20 Epub Date: 2023-12-15 DOI: 10.2323/jgam.2023.12.001
Ana Edith Ayala-Rodríguez, Silvia Valdés-Rodríguez, Víctor Enrique Olalde-Mathieu, María Arias-Padró, Cuauhtémoc Reyes-Moreno, Víctor Olalde-Portugal
{"title":"Extracellular ligninases production and lignin degradation by Paenibacillus polymyxa.","authors":"Ana Edith Ayala-Rodríguez, Silvia Valdés-Rodríguez, Víctor Enrique Olalde-Mathieu, María Arias-Padró, Cuauhtémoc Reyes-Moreno, Víctor Olalde-Portugal","doi":"10.2323/jgam.2023.12.001","DOIUrl":"10.2323/jgam.2023.12.001","url":null,"abstract":"<p><p>Bacteria represent an attractive source for the isolation and identification of potentially useful microorganisms for lignin depolymerization, a process required for the use of agricultural waste. In this work, ten autochthonous bacteria isolated from straw, cow manure, and composts were characterized for potential use in the biodelignification of the waste. A comparison of the ability to degrade lignin and the efficiency of ligninolytic enzymes was performed in bacteria grown in media with lignin as a sole carbon source (LLM, 3.5g/L lignin-alkali) and in complex media supplemented with All-Ban fiber (FLM, 1.5g/L). Bacterial isolates showed different abilities to degrade lignin, they decreased the lignin concentration from 7.6 to 18.6% in LLM and from 11.1 to 44.8% in FLM. They also presented the activity of manganese peroxidase, lignin peroxidases, and laccases with different specific activities. However, strain 26 identified as Paenibacillus polymyxa by sequencing the 16S rRNA showed the highest activity of lignin peroxidase and the ability to degrade efficiently lignocellulose. In addition, P. polymyxa showed the highest potential (desirability ≥ 0.795) related to the best combination of properties to depolymerize lignin from biomass. The results suggest that P. polymyxa has a coordinated lignin degradation system constituted of lignin peroxidase, manganese peroxidase, and laccase enzymes.</p>","PeriodicalId":15842,"journal":{"name":"Journal of General and Applied Microbiology","volume":" ","pages":""},"PeriodicalIF":0.8,"publicationDate":"2024-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138805167","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Impact of salinity and time on structure and functional potential of wastewater treatment biofilms in intermittent sand bioreactors. 盐度和时间对间歇式沙生物反应器中污水处理生物膜的结构和功能潜力的影响。
IF 0.8 4区 生物学
Journal of General and Applied Microbiology Pub Date : 2024-07-20 Epub Date: 2024-01-18 DOI: 10.2323/jgam.2023.12.003
Kristen Conroy, Jelmer Poelstra, Karen Mancl
{"title":"Impact of salinity and time on structure and functional potential of wastewater treatment biofilms in intermittent sand bioreactors.","authors":"Kristen Conroy, Jelmer Poelstra, Karen Mancl","doi":"10.2323/jgam.2023.12.003","DOIUrl":"10.2323/jgam.2023.12.003","url":null,"abstract":"<p><p>High salt wastewater is produced in industries, including seafood and pickling processing. The salinity in such wastewaters has been shown to negatively impact biological treatment efficacy. Little is known about the changes in the microbial community structure in the mature biological 2 treatment systems, the impacts of salinity on community composition, and the shifts over time during operation. This study aimed to identify the changes in the microbial community due to both salt and days of operation through 16s rRNA sequencing and KEGG functional predictions. Intermittent sand bioreactors (ISBs) with a focus on ammonia treatment were utilized. Results showed that the overall community structure and diversity were distinct as wastewater salinity varied from 0%-1.3%. At 1.3% salinity Zoogloea, a common genus in wastewater treatment plants, was not present and Aequorovita, Thauera and Dokdonella became the dominant genera. Nitrosomonas, an important ammonia oxidizing bacteria, increased in abundance with days of operation but was not significantly impacted by an increase in salinity. This finding was further supported by an increase in predicted nitrification potential with time of operation within all intermittent sand bioreactors tested. These results provide a deeper understanding of the impacts of salinity on microbial community development in biological treatment systems and elucidate the shifts in community structure occurring during early operations and into system maturity.</p>","PeriodicalId":15842,"journal":{"name":"Journal of General and Applied Microbiology","volume":" ","pages":""},"PeriodicalIF":0.8,"publicationDate":"2024-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139485646","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Systematic promoter design for plasmid-encoded S-adenosylmethionine sensing systems. 质粒编码的 S-腺苷蛋氨酸传感系统的系统性启动子设计。
IF 0.8 4区 生物学
Journal of General and Applied Microbiology Pub Date : 2024-07-20 Epub Date: 2024-01-29 DOI: 10.2323/jgam.2024.01.002
Taro Watanabe, Yuki Kimura, Daisuke Umeno
{"title":"Systematic promoter design for plasmid-encoded S-adenosylmethionine sensing systems.","authors":"Taro Watanabe, Yuki Kimura, Daisuke Umeno","doi":"10.2323/jgam.2024.01.002","DOIUrl":"10.2323/jgam.2024.01.002","url":null,"abstract":"<p><p>S-adenosylmethionine (SAM) is an important biomolecule that mainly acts as a methyl donor and plays many roles in a variety of biological functions. SAM is also required for the biosynthesis of valuable methylated compounds, but its supply is a bottleneck for these biosynthetic pathways. To overcome this bottleneck and to reconfigure SAM homeostasis, a high-throughput sensing system for changes in intracellular SAM availability is required. We constructed a plasmid that can detect the factors that can alter SAM availability using minimal components. It does so by placing a fluorescent protein under a promoter controlled by endogenous MetJ, a transcription factor that represses its own regulons upon binding with SAM. Next, to validate SAM-responsive behavior, we systematically reconstructed 10 synthetic promoters with different positions and with different number of metbox sites. We found that a position between the -35 box and the -10 box was the most effective for repression and that this setup was suitable for detecting the genetic or environmental factors that can deplete and recover the intracellular SAM availability. Overall, the response patterns of the synthetic MetJ-regulated promoters characterized in this study may be useful for the development of better SAM biosensing systems.</p>","PeriodicalId":15842,"journal":{"name":"Journal of General and Applied Microbiology","volume":" ","pages":""},"PeriodicalIF":0.8,"publicationDate":"2024-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139570013","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of the Csr global regulatory system mediated by small RNA decay in Aeromonas salmonicida. 鉴定沙门氏菌中由小 RNA 降解介导的 Csr 全局调控系统。
IF 0.8 4区 生物学
Journal of General and Applied Microbiology Pub Date : 2024-07-20 Epub Date: 2024-01-18 DOI: 10.2323/jgam.2023.12.004
Olga Gladyshchuk, Masaki Yoshida, Koume Togashi, Hayuki Sugimoto, Kazushi Suzuki
{"title":"Identification of the Csr global regulatory system mediated by small RNA decay in Aeromonas salmonicida.","authors":"Olga Gladyshchuk, Masaki Yoshida, Koume Togashi, Hayuki Sugimoto, Kazushi Suzuki","doi":"10.2323/jgam.2023.12.004","DOIUrl":"10.2323/jgam.2023.12.004","url":null,"abstract":"<p><p>We investigated the presence and functionality of the carbon storage regulator (Csr) system in Aeromonas salmonicida SWSY-1.411. CsrA, an RNA-binding protein, shared 89% amino acid sequence identity with Escherichia coli CsrA. CsrB/C sRNAs exhibited a typical stem-loop structure, with more GGA motifs, which bind CsrA, than E. coli. CsrD had limited sequence identity with E. coli CsrD; however, it contained the conserved GGDEF and EAL domains. Functional analysis in E. coli demonstrated that the Csr system of A. salmonicida influences glycogen biosynthesis, biofilm formation, motility, and stability of both CsrB and CsrC sRNAs. These findings suggest that in A. salmonicida, the Csr system affects phenotypes like its E. coli counterpart. In A. salmonicida, defects in csr homologs affected biofilm formation, motility, and chitinase production. However, glycogen accumulation and protease production were unaffected. The expression of flagellar-related genes and chitinase genes was suppressed in the csrA-deficient A. salmonicida. Northern blot analysis indicated the stabilization of CsrB and CsrC in the csrD-deficient A. salmonicida. Similar to that in E. coli, the Csr system in A. salmonicida comprises the RNA-binding protein CsrA, the sRNAs CsrB and CsrC, and the sRNA decay factor CsrD. This study underscores the conservation and functionality of the Csr system and raises questions about its regulatory targets and mechanisms in A. salmonicida.</p>","PeriodicalId":15842,"journal":{"name":"Journal of General and Applied Microbiology","volume":" ","pages":""},"PeriodicalIF":0.8,"publicationDate":"2024-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139485641","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Biodegradation of phthalic acid esters (PAEs) by Janthinobacterium sp. strain E1 under stress conditions. Janthinobacterium sp. 菌株 E1 在压力条件下对邻苯二甲酸酯 (PAE) 的生物降解。
IF 0.8 4区 生物学
Journal of General and Applied Microbiology Pub Date : 2024-07-20 Epub Date: 2024-01-15 DOI: 10.2323/jgam.2023.12.002
Kailu Zhang, Hui Zhou, Juntao Ke, Hongli Feng, Cunlong Lu, Shaoxing Chen, Aimin Liu
{"title":"Biodegradation of phthalic acid esters (PAEs) by Janthinobacterium sp. strain E1 under stress conditions.","authors":"Kailu Zhang, Hui Zhou, Juntao Ke, Hongli Feng, Cunlong Lu, Shaoxing Chen, Aimin Liu","doi":"10.2323/jgam.2023.12.002","DOIUrl":"10.2323/jgam.2023.12.002","url":null,"abstract":"<p><p>Phthalates esters (PAEs) are a kind of polymeric material additives widely been added into plastics to improve products' flexibility. It can easily cause environmental pollution which are hazards to public health. In this study, we isolated an efficient PAEs degrading strain, Janthinobacterium sp. E1, and determined its degradation effect of di-2-ethylhexyl phthalate (DEHP) under stress conditions. Strain E1 showed an obvious advantage in pollutants degradation under various environmental stress conditions. Degradation halo clearly occurred around the colony of strain E1 on agar plate supplemented with triglyceride. Strain E1's esterase is a constitutively expressed intracellular enzyme. The esterase purified from strain E1 showed a higher catalytic effect on short-chain PAEs than long-chain PAEs. The input of DEHP, DBP (dibutyl phthalate) and DMP (dimethyl phthalate) into the tested soil did not change the species composition of soil prokaryotic community, but altered the dominant species in specific environmental conditions. And the community diversity and richness decreased to a certain extent. However, the diversity and richness of the microbial community were improved after the contaminated soil was treated with the strain E1. Our results also suggested that strain E1 exhibited a tremendous potential in environmental bioremediation in the real environment, which provides a new insight into the elimination of the pollutants contamination in the urban environment.</p>","PeriodicalId":15842,"journal":{"name":"Journal of General and Applied Microbiology","volume":" ","pages":""},"PeriodicalIF":0.8,"publicationDate":"2024-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139466704","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Zn solubilizing bacteria (ZSB) mitigate toxicity of silver and Titanium dioxide nanoparticles in Mung bean by increasing photosynthetic pigment content. 锌溶解菌(ZSB)通过增加光合色素含量来减轻纳米银和二氧化钛对绿豆的毒性。
IF 0.8 4区 生物学
Journal of General and Applied Microbiology Pub Date : 2024-06-27 DOI: 10.2323/jgam.2024.05.005
Mahvash Haroon, Shams Tabrez Khan, Abdul Malik
{"title":"Zn solubilizing bacteria (ZSB) mitigate toxicity of silver and Titanium dioxide nanoparticles in Mung bean by increasing photosynthetic pigment content.","authors":"Mahvash Haroon, Shams Tabrez Khan, Abdul Malik","doi":"10.2323/jgam.2024.05.005","DOIUrl":"https://doi.org/10.2323/jgam.2024.05.005","url":null,"abstract":"<p><p>Zn-deficiency, a global health challenge affects one-third of the world population. Zn-biofertilizer offer an efficient and cost-effective remedy. As Zn-biofertilizer can improve plant growth and grain's Zn-content ensuring improved dietary Zn-supply. This study sought to understand how silver and TiO<sub>2</sub> nanoparticles in the rhizosphere affect the activity of Zn-solubilization bacteria (ZSB) and plant growth. Two ZSB strains Bacillus sp. D-7 and Pseudomonas sp. D-117 with excellent Zn-solubilization efficiency of 254 and 260%, respectively were isolated and characterized using polyphasic characterization including 16S rRNA gene sequencing to formulate an effective Zn-biofertilizer. The plant growth promoting activity of this biofertilizer in Mung bean was checked in the presence and absence of various doses of TiO<sub>2</sub> and Ag-NPs and was compared with plant grown without biofertilizer. The change in rate of seed germination, vegetative growth (shoot and root length, fresh and dry weight), photosynthetic pigment and Zn-content was checked. Lower doses of nanomaterials (50 and 100 mg kg⁻¹ soil) slightly promoted the plant growth compared to control. While, higher doses (200 and 400 mg kg⁻¹ soil) inhibited the growth. A maximum decrease of shoot length, root length, fresh-weight, and dry-weight of 57.1, 53.9, 53.1, and 10.4% respectively was observed with 400 mg kg⁻¹ of Ag-NPs. However, in the presence of ZSB, the decrease at the same Ag-NP concentration was 41.6, 31.5, 27.4, and 6.6, respectively. These results strongly suggest that Zn-solubilizing bacteria improve resilience to nanoparticles toxicity and helps in Zn fortification in Mung bean even under nanomaterial stress.</p>","PeriodicalId":15842,"journal":{"name":"Journal of General and Applied Microbiology","volume":" ","pages":""},"PeriodicalIF":0.8,"publicationDate":"2024-06-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141457388","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development of conjugation-mediated versatile site-specific single-copy luciferase fusion system. 偶联介导的多功能位点特异性单拷贝萤光素酶融合系统的开发。
IF 1.2 4区 生物学
Journal of General and Applied Microbiology Pub Date : 2024-05-02 Epub Date: 2023-11-07 DOI: 10.2323/jgam.2023.10.001
Akinori Kato
{"title":"Development of conjugation-mediated versatile site-specific single-copy luciferase fusion system.","authors":"Akinori Kato","doi":"10.2323/jgam.2023.10.001","DOIUrl":"10.2323/jgam.2023.10.001","url":null,"abstract":"<p><p>There are a number of reporter systems that are useful for gene expression analysis in bacteria. However, at least in Salmonella, a versatile and simple luciferase reporter system that can be integrated precisely behind a promoter or gene of interest on a chromosome is not currently available. The luciferase operon luxCDABE from Photorhabdus luminescens has several advantages, including brightness, wide linear range, absence in most bacteria, stability at high temperature, and no substrate addition required for the assay. Here, a conjugation-mediated site-specific single-copy luciferase fusion system is developed. A reporter plasmid containing the conditional replication origin R6Kgγ, FRT-luxCDABE, and Km<sup>R</sup> marker was designed to be incorporated into the FRT site behind the promoter or gene of interest on the chromosome in cells expressing FLP. However, when this reporter plasmid was electroporated directly into such a S. enterica strain, no colonies appeared, likely due to the low transformation efficiency of this relatively large plasmid DNA. Meanwhile, the same reporter plasmid was successfully introduced and launched as an insert of an FRT-containing conjugative transfer plasmid from a mating E. coli strain to the same recipient S. enterica strain, as well as Citrobacter koseri. RcsB-dependent inducible luminescence from the constructed wzc-luxCDABE strains was confirmed. This system is feasible for detecting very low levels of transcription, even in Gram-negative bacterial species that are relatively difficult to genetically manipulate.</p>","PeriodicalId":15842,"journal":{"name":"Journal of General and Applied Microbiology","volume":" ","pages":"318-326"},"PeriodicalIF":1.2,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71521730","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Heterologous expression and characterization of an M4 family extracellular metalloprotease for detergent application. 用于洗涤剂应用的M4家族胞外金属蛋白酶的异源表达和表征。
IF 1.2 4区 生物学
Journal of General and Applied Microbiology Pub Date : 2024-05-02 Epub Date: 2023-10-26 DOI: 10.2323/jgam.2023.09.002
Man Hao, Chaoshuo Shi, Weifeng Gong, Jia Liu, Xiangxin Meng, Fufeng Liu, Fuping Lu, Huitu Zhang
{"title":"Heterologous expression and characterization of an M4 family extracellular metalloprotease for detergent application.","authors":"Man Hao, Chaoshuo Shi, Weifeng Gong, Jia Liu, Xiangxin Meng, Fufeng Liu, Fuping Lu, Huitu Zhang","doi":"10.2323/jgam.2023.09.002","DOIUrl":"10.2323/jgam.2023.09.002","url":null,"abstract":"<p><p>Proteolytic enzymes stand out as the most widely employed category utilized in manufacturing industry. A new protease was separated from Planococcus sp.11815 strain and named as nprS-15615 in this research. The gene of this protease has not been reported, and its enzymatic properties have been studied for the first time. To enhance enzyme production, the Planococcus sp. protease gene was expressed in Bacillus licheniformis 2709. The expression level of nprS-15615 was observed under the control of regulatory elements P<sub>aprE</sub>. nprS-15615 protease activity reached 1186.24±32.87 U/mL after 48 hours of cultivation in shake flasks which was nearly four times the output of the original bacteria (291.38±25.73U/mL). The optimum temperature and pH of the recombinant protease were 30 ℃ and 8.0, respectively.The enzyme exhibited the highest capacity for hydrolyzing casein and demonstrated resilience towards a NaCl concentration of 10.0% (wt/v). Furthermore, in the presence of 0.5% surfactants, the recombinant protease activity can maintain above 75%, and with the existence of 0.5% liquid detergents, there was basically no loss of enzyme activity which indicated that nprS-15615 had good compatibility with surfactants and liquid detergents. In addition, npS-15615 performed well in the washing experiment, and the washing effect at 20 ℃ can be significantly improved by adding crude enzyme solution in the washing process.</p>","PeriodicalId":15842,"journal":{"name":"Journal of General and Applied Microbiology","volume":" ","pages":"309-317"},"PeriodicalIF":1.2,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50161838","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metarhizium robertsii COH1 functionally complements Schizosaccharomyces pombe Ecl family proteins. 罗伯特绿僵菌COH1在功能上与pombe裂殖酵母Ecl家族蛋白互补。
IF 1.2 4区 生物学
Journal of General and Applied Microbiology Pub Date : 2024-05-02 Epub Date: 2023-10-06 DOI: 10.2323/jgam.2023.09.001
Hokuto Ohtsuka, Sawa Kawai, Yoko Otsubo, Takafumi Shimasaki, Akira Yamashita, Hirofumi Aiba
{"title":"Metarhizium robertsii COH1 functionally complements Schizosaccharomyces pombe Ecl family proteins.","authors":"Hokuto Ohtsuka, Sawa Kawai, Yoko Otsubo, Takafumi Shimasaki, Akira Yamashita, Hirofumi Aiba","doi":"10.2323/jgam.2023.09.001","DOIUrl":"10.2323/jgam.2023.09.001","url":null,"abstract":"<p><p>The fission yeast Schizosaccharomyces pombe ecl family genes respond to various starvation signals and induce appropriate intracellular responses, including the extension of chronological lifespan and induction of sexual differentiation. Herein, we propose that the colonization of hemocoel 1 (COH1) protein of Metarhizium robertsii, an insect-pathogenic fungus, is a functional homolog of S. pombe Ecl1 family proteins.</p>","PeriodicalId":15842,"journal":{"name":"Journal of General and Applied Microbiology","volume":" ","pages":"335-338"},"PeriodicalIF":1.2,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41182753","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Purification and characterization of moderately thermostable raw-starch digesting α-amylase from endophytic Streptomyces mobaraensis DB13 associated with Costus speciosus. 从内生链霉菌(Streptomyces mobaraensis DB13)中纯化和表征与木薯(Costus speciosus)相关的中等恒温生淀粉消化α-淀粉酶。
IF 1.2 4区 生物学
Journal of General and Applied Microbiology Pub Date : 2024-05-02 Epub Date: 2023-08-25 DOI: 10.2323/jgam.2023.08.001
Dina Barman, Mamtaj S Dkhar
{"title":"Purification and characterization of moderately thermostable raw-starch digesting α-amylase from endophytic Streptomyces mobaraensis DB13 associated with Costus speciosus.","authors":"Dina Barman, Mamtaj S Dkhar","doi":"10.2323/jgam.2023.08.001","DOIUrl":"10.2323/jgam.2023.08.001","url":null,"abstract":"<p><p>Endophytic actinobacteria are known to produce various enzymes with potential industrial applications. Alpha-amylase is an important class of industrial enzyme with a multi-dimensional utility. The present experiment was designed to characterize a moderately thermostable α-amylase producing endophytic Streptomyces mobaraensis DB13 isolated from Costus speciosus (J. Koenig) Sm. The enzyme was purified using 60% ammonium sulphate precipitation, dialysis, and Sephadex G-100 column chromatography. Based on 12% SDS-PAGE, the molecular weight of the purified α-amylase was estimated to be 55 kDa. The maximum α-amylase activity was achieved at pH 7.0, 50°C and it retained 80% of its activity at both pH 7.0 and 8.0 after incubation for 2 h. The α-mylase activity is strongly enhanced by Ca<sup>2+</sup>, Mg<sup>2+</sup>, and inhibited by Ba<sup>2+</sup>. The activity remains stable in the presence of Tween-80, SDS, PMSF, and Triton X-100; however, β-mercaptoethanol, EDTA, and H<sub>2</sub>O<sub>2</sub> reduced the activity. The kinetic parameters K<sub>m</sub> and V<sub>max</sub> values for this α-amylase were calculated as 2.53 mM and 29.42 U/mL respectively. The α-amylase had the ability to digest various raw starches at a concentration of 10 mg/mL at pH 7.0, 50°C, where maize and rice are the preferred substrates. The digestion starts after 4 h of incubation, which reaches maximum after 48 h of incubation. These results suggest that S. mobaraensis DB13 is a potential source of moderately thermostable α-amylase enzyme, that effciently hydrolyzes raw starch. It suggesting that this α-amylase is a promising candidate to be use for industrial purposes.</p>","PeriodicalId":15842,"journal":{"name":"Journal of General and Applied Microbiology","volume":" ","pages":"293-300"},"PeriodicalIF":1.2,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10074957","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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