发布求助
文献互助 智能选刊 最新文献

Genome Announcements最新文献

筛选
英文 中文
Draft Genome Sequence of the Yeast Nadsonia starkeyi-henricii UCD142, Isolated from Forest Soil in Ireland. 从爱尔兰森林土壤中分离的Nadsonia starkeyi-henricii UCD142基因组序列草图
Genome Announcements Pub Date : 2018-06-21 DOI: 10.1128/genomeA.00549-18
Sinéad O'Boyle, Sean A Bergin, Éabha E Hussey, Aaron D McLaughlin, Luan R Riddell, Kevin P Byrne, Kenneth H Wolfe, Caoimhe E O'Brien, Geraldine Butler
{"title":"Draft Genome Sequence of the Yeast Nadsonia starkeyi-henricii UCD142, Isolated from Forest Soil in Ireland.","authors":"Sinéad O'Boyle,&nbsp;Sean A Bergin,&nbsp;Éabha E Hussey,&nbsp;Aaron D McLaughlin,&nbsp;Luan R Riddell,&nbsp;Kevin P Byrne,&nbsp;Kenneth H Wolfe,&nbsp;Caoimhe E O'Brien,&nbsp;Geraldine Butler","doi":"10.1128/genomeA.00549-18","DOIUrl":"https://doi.org/10.1128/genomeA.00549-18","url":null,"abstract":"<p><p>We report a draft genome sequence of a strain of the nonfermentative yeast <i>Nadsonia starkeyi-henricii</i>, isolated from soil in a forest in Ireland. Comparison to <i>Nadsonia fulvescens</i> shows few rearrangements and a level of divergence similar to that of <i>Saccharomyces cerevisiae</i> versus <i>Saccharomyces paradoxus</i> Its mitochondrial genome lacks <i>NAD</i> genes.</p>","PeriodicalId":12619,"journal":{"name":"Genome Announcements","volume":"6 25","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1128/genomeA.00549-18","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36246850","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Draft Genome Sequence of Paraburkholderia sp. Strain C35, Isolated from a Malaysian Tropical Peat Swamp Forest. 马来西亚热带泥炭沼泽森林中分离的Paraburkholderia sp.菌株C35的基因组序列草图
Genome Announcements Pub Date : 2018-06-21 DOI: 10.1128/genomeA.00561-18
Chin Chin Too, Kuan Shion Ong, Markus J Ankenbrand, Sui Mae Lee, Catherine M Yule, Alexander Keller
{"title":"Draft Genome Sequence of Paraburkholderia sp. Strain C35, Isolated from a Malaysian Tropical Peat Swamp Forest.","authors":"Chin Chin Too,&nbsp;Kuan Shion Ong,&nbsp;Markus J Ankenbrand,&nbsp;Sui Mae Lee,&nbsp;Catherine M Yule,&nbsp;Alexander Keller","doi":"10.1128/genomeA.00561-18","DOIUrl":"https://doi.org/10.1128/genomeA.00561-18","url":null,"abstract":"<p><p>We report the draft genome sequence of a bacterial isolate, <i>Paraburkholderia</i> sp. strain C35, which was isolated from a Malaysian tropical peat swamp forest. The putative genes for the biogeochemical processes were annotated and are publicly available in the online databases.</p>","PeriodicalId":12619,"journal":{"name":"Genome Announcements","volume":"6 25","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1128/genomeA.00561-18","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36246858","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome Sequences of Shewanella baltica and Shewanella morhuae Strains Isolated from the Gastrointestinal Tract of Freshwater Fish. 淡水鱼胃肠道分离的波罗的海希瓦氏菌和摩氏希瓦氏菌基因组序列。
Genome Announcements Pub Date : 2018-06-21 DOI: 10.1128/genomeA.00541-18
Daniel Castillo, Lone Gram, Frank E Dailey
{"title":"Genome Sequences of Shewanella baltica and Shewanella morhuae Strains Isolated from the Gastrointestinal Tract of Freshwater Fish.","authors":"Daniel Castillo,&nbsp;Lone Gram,&nbsp;Frank E Dailey","doi":"10.1128/genomeA.00541-18","DOIUrl":"https://doi.org/10.1128/genomeA.00541-18","url":null,"abstract":"<p><p>We present here the genome sequences of <i>Shewanella baltica</i> strain CW2 and <i>Shewanella morhuae</i> strain CW7, isolated from the gastrointestinal tract of <i>Salvelinus namaycush</i> (lean lake trout) and <i>Coregonus clupeaformis</i> (whitefish), respectively. These genome sequences provide insights into the niche adaptation of these specific species in freshwater systems.</p>","PeriodicalId":12619,"journal":{"name":"Genome Announcements","volume":"6 25","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1128/genomeA.00541-18","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36246405","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Complete Genome Sequence of Escherichia coli ME8067, an Azide-Resistant Laboratory Strain Used for Conjugation Experiments. 用于偶联实验的耐叠氮化物实验室菌株大肠杆菌ME8067全基因组序列
Genome Announcements Pub Date : 2018-06-21 DOI: 10.1128/genomeA.00515-18
Yasufumi Matsumura, Masaki Yamamoto, Satoshi Nakano, Miki Nagao
{"title":"Complete Genome Sequence of Escherichia coli ME8067, an Azide-Resistant Laboratory Strain Used for Conjugation Experiments.","authors":"Yasufumi Matsumura,&nbsp;Masaki Yamamoto,&nbsp;Satoshi Nakano,&nbsp;Miki Nagao","doi":"10.1128/genomeA.00515-18","DOIUrl":"https://doi.org/10.1128/genomeA.00515-18","url":null,"abstract":"<p><p>We report here the complete genome sequence of <i>Escherichia coli</i> ME8067, an azide-resistant laboratory strain used for conjugation experiments. The ME8067 genome was closely related to <i>E. coli</i> strain K-12 substrain W3110. This genome sequence will support further genetic analysis of conjugative elements.</p>","PeriodicalId":12619,"journal":{"name":"Genome Announcements","volume":"6 25","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1128/genomeA.00515-18","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36247032","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Complete Genome Sequence of Bacillus subtilis Strain DKU_NT_03, Isolated from a Traditional Korean Food Using Soybean (Chung-gook-jang) for High-Quality Nattokinase Activity. 从韩国传统食品大豆中分离的枯草芽孢杆菌DKU_NT_03的全基因组测序，以获得高质量的纳豆激酶活性
Genome Announcements Pub Date : 2018-06-21 DOI: 10.1128/genomeA.00526-18
Hee-Won Jeong, Man-Seok Bang, Yea-Jin Lee, Su Ji Lee, Sang-Cheol Lee, Jang-In Shin, Chung-Hun Oh
{"title":"Complete Genome Sequence of Bacillus subtilis Strain DKU_NT_03, Isolated from a Traditional Korean Food Using Soybean (Chung-gook-jang) for High-Quality Nattokinase Activity.","authors":"Hee-Won Jeong,&nbsp;Man-Seok Bang,&nbsp;Yea-Jin Lee,&nbsp;Su Ji Lee,&nbsp;Sang-Cheol Lee,&nbsp;Jang-In Shin,&nbsp;Chung-Hun Oh","doi":"10.1128/genomeA.00526-18","DOIUrl":"https://doi.org/10.1128/genomeA.00526-18","url":null,"abstract":"<p><p>We present here the complete genome sequence of <i>Bacillus subtilis</i> strain DKU_NT_03 isolated from the traditional Korean food chung-gook-jang, which is made from soybeans. This strain was chosen to identify genetic factors with high-quality nattokinase activity.</p>","PeriodicalId":12619,"journal":{"name":"Genome Announcements","volume":"6 25","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1128/genomeA.00526-18","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36247037","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle. 龙葵块茎基因组序列草图。一种白色的可食用松露。
Genome Announcements Pub Date : 2018-06-21 DOI: 10.1128/genomeA.00537-18
Claude Murat, Alan Kuo, Kerrie W Barry, Alicia Clum, Rhyan B Dockter, Laure Fauchery, Mirco Iotti, Annegret Kohler, Kurt LaButti, Erika A Lindquist, Anna Lipzen, Emmanuelle Morin, Mei Wang, Igor V Grigoriev, Alessandra Zambonelli, Francis M Martin
{"title":"Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle.","authors":"Claude Murat,&nbsp;Alan Kuo,&nbsp;Kerrie W Barry,&nbsp;Alicia Clum,&nbsp;Rhyan B Dockter,&nbsp;Laure Fauchery,&nbsp;Mirco Iotti,&nbsp;Annegret Kohler,&nbsp;Kurt LaButti,&nbsp;Erika A Lindquist,&nbsp;Anna Lipzen,&nbsp;Emmanuelle Morin,&nbsp;Mei Wang,&nbsp;Igor V Grigoriev,&nbsp;Alessandra Zambonelli,&nbsp;Francis M Martin","doi":"10.1128/genomeA.00537-18","DOIUrl":"https://doi.org/10.1128/genomeA.00537-18","url":null,"abstract":"<p><p>The ascomycete <i>Tuber borchii</i> (Pezizomycetes) is a whitish edible truffle that establishes ectomycorrhizal symbiosis with trees and shrubs. This fungus is ubiquitous in Europe and is also cultivated outside Europe. Here, we present the draft genome sequence of <i>T. borchii</i> strain Tbo3840 (97.18 Mb in 969 scaffolds, with 12,346 predicted protein-coding genes).</p>","PeriodicalId":12619,"journal":{"name":"Genome Announcements","volume":"6 25","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1128/genomeA.00537-18","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36246402","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 17
Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127. pulcherrima Metschnikowia亚支高杂合酵母菌UCD127基因组序列草图。
Genome Announcements Pub Date : 2018-06-21 DOI: 10.1128/genomeA.00550-18
Anjan Venkatesh, Anthony L Murray, Adrian B Boyle, Lisa Quinn Farrington, Timothy J Maher, Peadar Ó'Gaora, Kenneth H Wolfe, Caoimhe E O'Brien, Geraldine Butler
{"title":"Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127.","authors":"Anjan Venkatesh,&nbsp;Anthony L Murray,&nbsp;Adrian B Boyle,&nbsp;Lisa Quinn Farrington,&nbsp;Timothy J Maher,&nbsp;Peadar Ó'Gaora,&nbsp;Kenneth H Wolfe,&nbsp;Caoimhe E O'Brien,&nbsp;Geraldine Butler","doi":"10.1128/genomeA.00550-18","DOIUrl":"https://doi.org/10.1128/genomeA.00550-18","url":null,"abstract":"<p><p><i>Metschnikowia</i> strain UCD127 was isolated from soil in Ireland and sequenced. It is a highly heterozygous diploid strain with 385,000 single nucleotide polymorphisms (SNPs). Its ribosomal DNA has the highest similarity to that of <i>M. chrysoperlae</i>, but its <i>ACT1</i> and <i>TEF1</i> loci and mitochondrial genome show affinity to those of <i>M. fructicola</i>, whose genome is significantly larger.</p>","PeriodicalId":12619,"journal":{"name":"Genome Announcements","volume":"6 25","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1128/genomeA.00550-18","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36246851","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 14
Complete Genome Sequences of Four Novel Human Gammapapillomavirus Types, HPV-219, HPV-220, HPV-221, and HPV-222, Isolated from Penile Skin Swabs from South African Men. 南非男性阴茎皮肤拭子分离的四种新型人类伽玛乳头瘤病毒HPV-219、HPV-220、HPV-221和HPV-222的全基因组序列
Genome Announcements Pub Date : 2018-06-21 DOI: 10.1128/genomeA.00584-18
Alltalents T Murahwa, Tracy L Meiring, Zizipho Z A Mbulawa, Anna-Lise Williamson
{"title":"Complete Genome Sequences of Four Novel Human Gammapapillomavirus Types, HPV-219, HPV-220, HPV-221, and HPV-222, Isolated from Penile Skin Swabs from South African Men.","authors":"Alltalents T Murahwa,&nbsp;Tracy L Meiring,&nbsp;Zizipho Z A Mbulawa,&nbsp;Anna-Lise Williamson","doi":"10.1128/genomeA.00584-18","DOIUrl":"https://doi.org/10.1128/genomeA.00584-18","url":null,"abstract":"<p><p>Four novel human gammapapillomaviruses were characterized from penile specimens using genome amplification, cloning, and sequencing. The HPV-219 L1 gene showed 87% nucleotide identity to that of HPV-213 of species gamma-13, HPV-220 had 72% identity to L1 of HPV-212 (gamma-17), HPV-221 had 80% identity to L1 of HPV-142 (gamma-10), and HPV-222 had 73% nucleotide identity to L1 of HPV-162 (gamma-19).</p>","PeriodicalId":12619,"journal":{"name":"Genome Announcements","volume":"6 25","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1128/genomeA.00584-18","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36245199","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Complete Genome Sequence of Mycobacterium shigaense. 志贺分枝杆菌全基因组序列。
Genome Announcements Pub Date : 2018-06-21 DOI: 10.1128/genomeA.00552-18
Mitsunori Yoshida, Hanako Fukano, Yoshitoshi Ogura, Yuko Kazumi, Satoshi Mitarai, Tetsuya Hayashi, Yoshihiko Hoshino
{"title":"Complete Genome Sequence of Mycobacterium shigaense.","authors":"Mitsunori Yoshida,&nbsp;Hanako Fukano,&nbsp;Yoshitoshi Ogura,&nbsp;Yuko Kazumi,&nbsp;Satoshi Mitarai,&nbsp;Tetsuya Hayashi,&nbsp;Yoshihiko Hoshino","doi":"10.1128/genomeA.00552-18","DOIUrl":"https://doi.org/10.1128/genomeA.00552-18","url":null,"abstract":"<p><p><i>Mycobacterium shigaense</i> is a slowly growing scotochromogenic species and a member of the <i>Mycobacterium simiae</i> complex group. Here, we report the complete sequence of its genome, comprising a 5.2-Mb chromosome. The sequence will represent the essential data for future phylogenetic and comparative genome studies of the <i>Mycobacterium simiae</i> complex group.</p>","PeriodicalId":12619,"journal":{"name":"Genome Announcements","volume":"6 25","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1128/genomeA.00552-18","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36246852","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Draft Genome Sequence of a Dissimilatory U(VI)-Reducing Bacterium, Shewanella xiamenensis Strain DCB2-1, Isolated from Nitrate- and Radionuclide-Contaminated Groundwater in Russia. 从俄罗斯硝酸盐和放射性核素污染的地下水中分离的异化性U(VI)还原菌厦门希瓦氏菌DCB2-1的基因组序列草图
Genome Announcements Pub Date : 2018-06-21 DOI: 10.1128/genomeA.00555-18
Denis S Grouzdev, Alexey V Safonov, Tamara L Babich, Tatiyana P Tourova, Maria S Krutkina, Tamara N Nazina
{"title":"Draft Genome Sequence of a Dissimilatory U(VI)-Reducing Bacterium, Shewanella xiamenensis Strain DCB2-1, Isolated from Nitrate- and Radionuclide-Contaminated Groundwater in Russia.","authors":"Denis S Grouzdev,&nbsp;Alexey V Safonov,&nbsp;Tamara L Babich,&nbsp;Tatiyana P Tourova,&nbsp;Maria S Krutkina,&nbsp;Tamara N Nazina","doi":"10.1128/genomeA.00555-18","DOIUrl":"https://doi.org/10.1128/genomeA.00555-18","url":null,"abstract":"<p><p>Here, we describe the draft genome sequence of <i>Shewanella xiamenensis</i> strain DCB2-1, isolated from nitrate- and radionuclide-contaminated groundwater. This strain is able to reduce nitrate, Tc(VII), Cr(VI), Fe(III), and U(VI), and its genome sequence contains several gene sets encoding denitrification, resistance to heavy metals, and reduction of metals and metalloids.</p>","PeriodicalId":12619,"journal":{"name":"Genome Announcements","volume":"6 25","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1128/genomeA.00555-18","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36246854","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 11
首页 上一页 下一页 尾页
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整，为了账户安全，请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
请完成安全验证×
相关产品
×
本文献相关产品
联系我们：info@booksci.cn Book学术提供免费学术资源搜索服务，方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号：481959085
Book学术官方微信