Fungal Biology Reviews最新文献_第9页

The hunt for sustainable biocontrol of oomycete plant pathogens, a case study of Phytophthora infestans 寻找卵菌类植物病原体的可持续生物防治——以晚疫病为例

IF 6 2区生物学

Fungal Biology Reviews Pub Date : 2022-06-01 DOI: 10.1016/j.fbr.2021.11.003

Maryam Hashemi , Dania Tabet , Murilo Sandroni , Clara Benavent-Celma , Jenifer Seematti , Christian B. Andersen , Laura J. Grenville-Briggs

{"title":"The hunt for sustainable biocontrol of oomycete plant pathogens, a case study of Phytophthora infestans","authors":"Maryam Hashemi , Dania Tabet , Murilo Sandroni , Clara Benavent-Celma , Jenifer Seematti , Christian B. Andersen , Laura J. Grenville-Briggs","doi":"10.1016/j.fbr.2021.11.003","DOIUrl":"10.1016/j.fbr.2021.11.003","url":null,"abstract":"<div>Late blight caused by the oomycete Phytophthora infestans is considered to be one of the most severe diseases of potato and tomato worldwide. Whilst current synthetic fungicides are efficient at controlling this disease, they are an environmental and economic burden. In line with EU directives to reduce the use of synthetic pesticides and increase the use of sustainable alternative disease control strategies that can form part of integrated pest management systems, practical biological control solutions are urgently needed. Despite the fact that there has been a large body of scientific research into microorganisms with potential for the biological control of late blight disease, relatively few commercial biocontrol agents, licensed to control late blight, exist. Furthermore, the practical uptake of those in Europe is lower than might be expected, suggesting that such solutions are not yet feasible, or effective. Here we review the scientific literature, focusing on the most recent developments in the hunt for efficient and sustainable biological control of late blight disease. We discuss the progress in our mechanistic understanding of mycoparasite–prey interactions, in the context of late blight and the challenges and limitations to the use of such knowledge in practical disease control within a European context.</div>","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"40 ","pages":"Pages 53-69"},"PeriodicalIF":6.0,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1749461321000555/pdfft?md5=56c8be4b68ffcb5c19802a74681069d8&pid=1-s2.0-S1749461321000555-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45662413","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 16

Pathogenicity of animal and plant parasitic Aphanomyces spp and their economic impact on aquaculture and agriculture 动植物寄生隐菌的致病性及其对水产和农业的经济影响

IF 6 2区生物学

Fungal Biology Reviews Pub Date : 2022-06-01 DOI: 10.1016/j.fbr.2021.08.001

Thomas Becking , Andrei Kiselev , Valentina Rossi , David Street-Jones , Frédéric Grandjean , Elodie Gaulin

{"title":"Pathogenicity of animal and plant parasitic Aphanomyces spp and their economic impact on aquaculture and agriculture","authors":"Thomas Becking , Andrei Kiselev , Valentina Rossi , David Street-Jones , Frédéric Grandjean , Elodie Gaulin","doi":"10.1016/j.fbr.2021.08.001","DOIUrl":"10.1016/j.fbr.2021.08.001","url":null,"abstract":"<div>Parasitic Aphanomyces species are a global threat to agri- and aquaculture, causing multimillion USD damage every year. Via the global trade, Aphanomyces has spread across all continents with exception of South America and Antarctica, and has become a major problem in pea, sugar beet, fish and crayfish production. The widespread A. euteiches and A. cochlioides induce root rot diseases in leguminous species and sugar beet respectively. The fish pathogen A. invadans is the causative agent of Epizootic Ulcerative Syndrome in various fish species whilst A. astaci infects crayfishes causing crayfish plague. Aphanomyces have developed an efficient transmission and infection mechanism which allows a rapid colonization and disruption of the host's infected tissues. This review presents an overview on the current research on Aphanomyces genus. We summarise the latest research efforts on four pathogenic Aphanomyces species, shedding light on the biology of these microorganisms, the pathogenicity factors of these parasites, the diseases which they cause, their distribution and finally the strategies to control the diseases.</div>","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"40 ","pages":"Pages 1-18"},"PeriodicalIF":6.0,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.fbr.2021.08.001","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42332991","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 9

LysM proteins in mammalian fungal pathogens 哺乳动物真菌病原体中的LysM蛋白

IF 6 2区生物学

Fungal Biology Reviews Pub Date : 2022-06-01 DOI: 10.1016/j.fbr.2022.02.001

José A. Oguiza

引用次数: 2

Current practices and emerging possibilities for reducing the spread of oomycete pathogens in terrestrial and aquatic production systems in the European Union 欧洲联盟陆地和水生生产系统中减少卵菌病原体传播的现行做法和新出现的可能性

IF 6 2区生物学

Fungal Biology Reviews Pub Date : 2022-06-01 DOI: 10.1016/j.fbr.2021.10.001

Clara Benavent-Celma , Noelia López-García , Tahmina Ruba , Magdalena E. Ściślak , David Street-Jones , Pieter van West , Stephen Woodward , Johanna Witzell

{"title":"Current practices and emerging possibilities for reducing the spread of oomycete pathogens in terrestrial and aquatic production systems in the European Union","authors":"Clara Benavent-Celma , Noelia López-García , Tahmina Ruba , Magdalena E. Ściślak , David Street-Jones , Pieter van West , Stephen Woodward , Johanna Witzell","doi":"10.1016/j.fbr.2021.10.001","DOIUrl":"10.1016/j.fbr.2021.10.001","url":null,"abstract":"<div>Diseases caused by oomycete pathogens are a global threat to forestry, agriculture and aquaculture. Because of their complex life cycles, characterised by dormant resting structures that enable their survival for years under hostile environmental conditions, reducing the spread of oomycetes is a challenging task. In this review, we present an overview of this challenge, starting from the need to understand the natural and anthropogenic dispersal pathways of these pathogens. Focusing on the European Union, we explore current legislation that forms a backbone for biosecurity protocols against the spread of oomycetes through trade and transport. We discuss the options for prevention, containment and long-term management of oomycetes in different production settings, emphasising the importance of prevention as the most cost-efficient strategy to reduce the spread of these pathogens. Finally, we highlight some of the new and emerging technologies and strategies as potential tools in the integrated pest management of animal and plant diseases caused by oomycetes. We emphasise the urgency of actions to halt the global spread of these pathogens.</div>","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"40 ","pages":"Pages 19-36"},"PeriodicalIF":6.0,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41727391","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 8

Transformation systems, gene silencing and gene editing technologies in oomycetes 卵菌的转化系统、基因沉默和基因编辑技术

IF 6 2区生物学

Fungal Biology Reviews Pub Date : 2022-06-01 DOI: 10.1016/j.fbr.2021.11.001

Bikal Ghimire , Marcia Saraiva , Christian B. Andersen , Anupam Gogoi , Mona Saleh , Nicola Zic , Pieter van West , May B. Brurberg

{"title":"Transformation systems, gene silencing and gene editing technologies in oomycetes","authors":"Bikal Ghimire , Marcia Saraiva , Christian B. Andersen , Anupam Gogoi , Mona Saleh , Nicola Zic , Pieter van West , May B. Brurberg","doi":"10.1016/j.fbr.2021.11.001","DOIUrl":"10.1016/j.fbr.2021.11.001","url":null,"abstract":"<div>Oomycetes are spore-forming eukaryotic microbes responsible for infections in animal and plant species worldwide, posing a threat to natural ecosystems, biodiversity and food security. Genomics and transcriptomics approaches, together with host interaction studies, give promising results towards better understanding of the infection mechanisms in oomycetes and their general biology. Significant development and progress in oomycetes genomic studies have been achieved over the past decades but further understanding of molecular processes, gene regulations and infection mechanisms are still needed. The use of molecular tools such as CRISPR/Cas and RNAi helped elucidate some of the molecular processes involved in host invasion and infection both in plant and animal pathogenic oomycetes. These methods provide an opportunity for accurate and detailed functional analysis involving various fields of studies such as genomics, epigenomics, proteomics, and interactomics. Functional gene characterisation is essential for filling the knowledge gaps in dynamic biological processes. However, every method has both advantages and limitations that should be considered before choosing the best method for investigating a particular research question. Here we review transformation systems, gene silencing and gene editing techniques in oomycetes, how they function, in which species and what are their main advantages and disadvantages.</div>","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"40 ","pages":"Pages 37-52"},"PeriodicalIF":6.0,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1749461321000531/pdfft?md5=48bca88a19c9c32d477434b3cd960243&pid=1-s2.0-S1749461321000531-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44873284","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 5

Role and genetic basis of specialised secondary metabolites in Trichoderma ecophysiology 木霉生态生理学中特殊次生代谢产物的作用及其遗传基础

IF 6 2区生物学

Fungal Biology Reviews Pub Date : 2022-03-01 DOI: 10.1016/j.fbr.2021.12.004

Isabel Vicente , Riccardo Baroncelli , Rosa Hermosa , Enrique Monte , Giovanni Vannacci , Sabrina Sarrocco

{"title":"Role and genetic basis of specialised secondary metabolites in Trichoderma ecophysiology","authors":"Isabel Vicente , Riccardo Baroncelli , Rosa Hermosa , Enrique Monte , Giovanni Vannacci , Sabrina Sarrocco","doi":"10.1016/j.fbr.2021.12.004","DOIUrl":"https://doi.org/10.1016/j.fbr.2021.12.004","url":null,"abstract":"<div>Species of fungal genus Trichoderma are characterized by a versatile lifestyle, high adaptability to the changing environmental conditions and the ability to establish sophisticated interactions with other organisms. Due to their ability to antagonize plant pathogens and to elicit the plant defence responses against biotic/abiotic stresses, Trichoderma spp. are commonly used as commercially biopesticides and biofertilizers. The Trichoderma success in the rhizosphere is supported by a wide arsenal of specialised metabolites (SMs) providing morphological and physiological autoregulation, self-protection and facilitating fungal communication. This review aims to explore the roles of SMs in the biology of fungi, with special emphasis on the genus Trichoderma and on how divergence in the SMs genetic structure determine Trichoderma lifestyles. Trichoderma genomes are endowed with a high number of SMs biosynthetic genes, and understanding the genetic basis of their biosynthesis is crucial for determining the role of these metabolites in Trichoderma ecophysiology and for expanding their application in crop protection. Recent advances on the characterization of the Trichoderma SMs genetic inventory driven by computational biology are discussed.</div>","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"39 ","pages":"Pages 83-99"},"PeriodicalIF":6.0,"publicationDate":"2022-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"72049254","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Cellular heterogeneity: yeast-side story 细胞异质性:酵母方面的故事

IF 6 2区生物学

Fungal Biology Reviews Pub Date : 2022-03-01 DOI: 10.1016/j.fbr.2021.11.005

Sandrine Pinheiro, Shashank Pandey, Serge Pelet

{"title":"Cellular heterogeneity: yeast-side story","authors":"Sandrine Pinheiro, Shashank Pandey, Serge Pelet","doi":"10.1016/j.fbr.2021.11.005","DOIUrl":"10.1016/j.fbr.2021.11.005","url":null,"abstract":"<div>A major challenge for cells lies in their ability to detect, respond and adapt to changing environments that may threaten their survival. Among the numerous evolutionary strategies, cell-to-cell heterogeneity allows the emergence of different phenotypes within a population. This variability in cellular behaviors can be essential for a small fraction of cells to adapt and survive in various environments. Analyses at the single-cell level have allowed to highlight the great variability that is present between cells within an isogenic population. Numerous molecular mechanisms have been uncovered, allowing to understand the emergence and the role of cellular heterogeneity. These attempts at identifying the source of cellular noise have also provided clues for strategies needed to control heterogeneity. In this review, S. cerevisiae is used as an example to illustrate the different factors leading to cell heterogeneity, ranging from intracellular processes to environmental constraints. In addition, some recent strategies developed to modulate cell-to-cell variability are discussed.</div>","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"39 ","pages":"Pages 34-45"},"PeriodicalIF":6.0,"publicationDate":"2022-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1749461321000579/pdfft?md5=f94b3732ec697cf3c655927b333df845&pid=1-s2.0-S1749461321000579-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54682785","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 6

Mycoparasitism as a mechanism of Trichoderma-mediated suppression of plant diseases 真菌寄生作为木霉介导的植物病害抑制机制

IF 6 2区生物学

Fungal Biology Reviews Pub Date : 2022-03-01 DOI: 10.1016/j.fbr.2021.11.004

Prasun K. Mukherjee , Artemio Mendoza-Mendoza , Susanne Zeilinger , Benjamin A. Horwitz

引用次数: 53

The putative role of zinc homeostasis in grain formation by Madurella mycetomatis during mycetoma infection 在足菌肿感染期间，锌稳态在足菌马杜球藻颗粒形成中的推测作用

IF 6 2区生物学

Fungal Biology Reviews Pub Date : 2022-03-01 DOI: 10.1016/j.fbr.2021.12.002

Saskia du Pré, Tanya Dogra, Wendy W.J. van de Sande

{"title":"The putative role of zinc homeostasis in grain formation by Madurella mycetomatis during mycetoma infection","authors":"Saskia du Pré, Tanya Dogra, Wendy W.J. van de Sande","doi":"10.1016/j.fbr.2021.12.002","DOIUrl":"10.1016/j.fbr.2021.12.002","url":null,"abstract":"<div>Madurella mycetomatis is the main cause of mycetoma, a chronic, granulomatous skin infection of the subcutaneous tissue. One of the main virulence factors is the formation of grains, which are difficult to treat with the currently available antifungal drugs. Studies have indicated that zinc homeostasis could be an important factor for grain formation. Therefore, in this review the mechanisms behind zinc homeostasis in other fungal species were summarized and an in silico analysis was performed to identify the components of zinc homeostasis in M. mycetomatis. Orthologues for many of the zinc homeostasis components found in other fungal species could also be identified in M. mycetomatis, including those components that have been identified to play a role in biofilm formation, a process which has some parallels with grain formation. Zinc homeostasis may well play an important role in the process of grain formation and, therefore, more knowledge on this subject in M. mycetomatis is required as it may lead to novel therapies to combat this debilitating disease.</div>","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"39 ","pages":"Pages 73-82"},"PeriodicalIF":6.0,"publicationDate":"2022-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1749461321000592/pdfft?md5=0abb89ea958eb79442c8c67048a087fc&pid=1-s2.0-S1749461321000592-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48550668","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 2

Beneficial interactions between bacteria and edible mushrooms 细菌和食用菌之间的有益相互作用

IF 6 2区生物学

Fungal Biology Reviews Pub Date : 2022-03-01 DOI: 10.1016/j.fbr.2021.12.001

Nienke Braat, Margot C. Koster, Han A.B. Wösten

引用次数: 10