Functional Plant Biology最新文献_第7页

Computational analysis and expression profiling of two-component system (TCS) gene family members in mango (Mangifera indica) indicated their roles in stress response. 对芒果（Mangifera indica）中的双组分系统（TCS）基因家族成员进行的计算分析和表达谱分析表明了它们在应激反应中的作用。

IF 3 4区生物学

Functional Plant Biology Pub Date : 2024-06-01 DOI: 10.1071/FP24055

Muhammad Sadaqat, Kinza Fatima, Farrukh Azeem, Tayyaba Shaheen, Mahmood-Ur- Rahman, Tehreem Ali, Wafa Abdullah I Al-Megrin, Muhammad Tahir Ul Qamar

{"title":"Computational analysis and expression profiling of two-component system (TCS) gene family members in mango (Mangifera indica) indicated their roles in stress response.","authors":"Muhammad Sadaqat, Kinza Fatima, Farrukh Azeem, Tayyaba Shaheen, Mahmood-Ur- Rahman, Tehreem Ali, Wafa Abdullah I Al-Megrin, Muhammad Tahir Ul Qamar","doi":"10.1071/FP24055","DOIUrl":"https://doi.org/10.1071/FP24055","url":null,"abstract":"The two-component system (TCS) gene family is among the most important signal transduction families in plants and is involved in the regulation of various abiotic stresses, cell growth and division. To understand the role of TCS genes in mango (Mangifera indica ), a comprehensive analysis of TCS gene family was carried out in mango leading to identification of 65 MiTCS genes. Phylogenetic analysis divided MiTCSs into three groups (histidine kinases, histidine-containing phosphotransfer proteins, and response regulators) and 11 subgroups. One tandem duplication and 23 pairs of segmental duplicates were found within the MiTCSs . Promoter analysis revealed that MiTCSs contain a large number of cis -elements associated with environmental stresses, hormone response, light signalling, and plant development. Gene ontology analysis showed their involvement in various biological processes and molecular functions, particularly signal transduction. Protein-protein interaction analysis showed that MiTCS proteins interacted with each other. The expression pattern in various tissues and under many stresses (drought, cold, and disease) showed that expression levels varied among various genes in different conditions. MiTCSs 3D structure predictions showed structural conservation among members of the same groups. This information can be further used to develop improved cultivars and will serve as a foundation for gaining more functional insights into the TCS gene family.","PeriodicalId":12483,"journal":{"name":"Functional Plant Biology","volume":"51 ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141316976","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Molecular cloning and characterisation of root-specific SlREO promoter of the Indian tomato (Solanum lycopersicum L.) cultivar. 印度番茄（Solanum lycopersicum L.）栽培品种根特异性 SlREO 启动子的分子克隆和特性分析。

IF 2.6 4区生物学

Functional Plant Biology Pub Date : 2024-06-01 DOI: 10.1071/FP24063

Penki Jenny, Amar A Sakure, Ankit Yadav, Sushil Kumar

{"title":"Molecular cloning and characterisation of root-specific SlREO promoter of the Indian tomato (Solanum lycopersicum L.) cultivar.","authors":"Penki Jenny, Amar A Sakure, Ankit Yadav, Sushil Kumar","doi":"10.1071/FP24063","DOIUrl":"10.1071/FP24063","url":null,"abstract":"Genetic transformation is helpful in enhancing crops, utilising promoters that can be constitutive, inducible, or tissue-specific. However, the use of constitutive promoters may hinder plant growth due to energy consumption during cellular processes. To optimise transgene effects, tissue-specific promoters like root-specific ones prove valuable in addressing root-related issues and enhancing productivity. Yet, identified root-specific promoters in crop are limited. To address this gap, the expression pattern of the root-specific SlREO promoter was examined across various crops. Sequencing confirmed its identity and high homology (99%) with the NCBI database, distinct from other plants tested. Using the PLACE database, six motifs associated with root expression were identified, along with several other important elements. The 2.4kb SlREO promoter was linked to a ß-glucuronidase (GUS) reporter gene alongside the CaMV35S promoter in pRI 201-AN-GUS vectors to study its expression. Histochemistry revealed strong root-specific expression in tomato (Solanum lycopersicum ) root tissues and limited expression in stems. However, the SlREO promoter did not consistently maintain its root-specific expression in other plants. Conversely, the CaMV35S promoter exhibited constitutive expression across all tissues in various plants. This study underscores the potential of the SlREO promoter as a root-specific regulatory element, offering avenues for improving crops, particularly against environmental stresses.","PeriodicalId":12483,"journal":{"name":"Functional Plant Biology","volume":"51 ","pages":""},"PeriodicalIF":2.6,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141316977","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Acclimation mechanism of microalgal photosynthetic apparatus under low atmospheric pressures - new astrobiological perspectives in a Mars-like atmosphere. 微藻光合装置在低气压下的适应机制--类火星大气中的天体生物学新视角。

IF 2.6 4区生物学

Functional Plant Biology Pub Date : 2024-06-01 DOI: 10.1071/FP24058

Charalampia-Stavroula Gritsi, Evangelos Sarmas, Vangelis Daskalakis, Kiriakos Kotzabasis

引用次数: 0

Effects of extra potassium supply and rootstocks indicate links between water, solutes and energy in Shiraz grapevines (Vitis vinifera) pericarps. 额外钾供应和砧木的影响表明了设拉子葡萄（葡萄属）果穗中水分、溶质和能量之间的联系。

IF 2.6 4区生物学

Functional Plant Biology Pub Date : 2024-06-01 DOI: 10.1071/FP23141

Yin Liu, Stephen Tyerman, Leigh Schmidtke, Suzy Rogiers

{"title":"Effects of extra potassium supply and rootstocks indicate links between water, solutes and energy in Shiraz grapevines (Vitis vinifera) pericarps.","authors":"Yin Liu, Stephen Tyerman, Leigh Schmidtke, Suzy Rogiers","doi":"10.1071/FP23141","DOIUrl":"https://doi.org/10.1071/FP23141","url":null,"abstract":"Potassium (K) is essential for the development of grapevines (Vitis vinifera ), accumulating into berries during maturation. Elevated K has been associated with high sugar and low acidity in juice. Characterising the accumulation patterns of K and other components in pericarps treated with various experimental factors may indicate potential regulators of berry K levels. A soil fertiliser trial using nutrient solutions with two K supply rates was conducted on potted Shiraz vines during berry ripening. Doubled-K supply increased L-malic acid content in the early-ripening phase, and increased K and magnesium concentrations in the late-ripening phase. Doubled-K supply reduced the ratio of K to sodium in later ripening phases, suggesting that the accumulation of K relative to sodium was limited in more mature berries supplied with extra K. Pericarp water percentage, sugar, K and ATP were correlated in both treatments, indicating links between hydration, solute transport and energy in maturing berries. In a separate rootstock trial over the two growing seasons, Shiraz scions grafted onto 420-A rootstock produced berries with lower K concentration and content than those grafted onto Ramsey or Ruggeri-140 rootstocks and own-rooted vines. This study demonstrated that the K supply and berry ripening phase impacted the berry K level.","PeriodicalId":12483,"journal":{"name":"Functional Plant Biology","volume":"51 ","pages":""},"PeriodicalIF":2.6,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141431678","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Silicon mitigates salinity effects on sorghum-sudangrass (Sorghum bicolor × Sorghum sudanense) by enhancing growth and photosynthetic efficiency. 硅通过提高生长和光合效率，减轻盐分对高粱-苏丹草（Sorghum bicolor × Sorghum sudanense）的影响。

IF 2.6 4区生物学

Functional Plant Biology Pub Date : 2024-06-01 DOI: 10.1071/FP24029

Farah Bounaouara, Rabaa Hidri, Mohammed Falouti, Mokded Rabhi, Chedly Abdelly, Walid Zorrig, Inès Slama

{"title":"Silicon mitigates salinity effects on sorghum-sudangrass (Sorghum bicolor × Sorghum sudanense) by enhancing growth and photosynthetic efficiency.","authors":"Farah Bounaouara, Rabaa Hidri, Mohammed Falouti, Mokded Rabhi, Chedly Abdelly, Walid Zorrig, Inès Slama","doi":"10.1071/FP24029","DOIUrl":"https://doi.org/10.1071/FP24029","url":null,"abstract":"The aim of this study was to investigate whether silicon (Si) supply was able to alleviate the harmful effects caused by salinity stress on sorghum-sudangrass (Sorghum bicolor ×Sorghum sudanense ), a species of grass raised for forage and grain. Plants were grown in the presence or absence of 150mM NaCl, supplemented or not with Si (0.5mM Si). Biomass production, water and mineral status, photosynthetic pigment contents, and gas exchange parameters were investigated. Special focus was accorded to evaluating the PSI and PSII. Salinity stress significantly reduced plant growth and tissue hydration, and led to a significant decrease in all other studied parameters. Si supply enhanced whole plant biomass production by 50%, improved water status, decreased Na+ and Cl- accumulation, and even restored chlorophyll a , chlorophyll b , and carotenoid contents. Interestingly, both photosystem activities (PSI and PSII) were enhanced with Si addition. However, a more pronounced enhancement was noted in PSI compared with PSII, with a greater oxidation state upon Si supply. Our findings confirm that Si mitigated the adverse effects of salinity on sorghum-sudangrass throughout adverse approaches. Application of Si in sorghum appears to be an efficient key solution for managing salt-damaging effects on plants.","PeriodicalId":12483,"journal":{"name":"Functional Plant Biology","volume":"51 ","pages":""},"PeriodicalIF":2.6,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141431679","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Recent advances in genome editing strategies for balancing growth and defence in sugarcane (Saccharum officinarum) 平衡甘蔗（Saccharum officinarum）生长和防御的基因组编辑策略的最新进展

IF 3 4区生物学

Functional Plant Biology Pub Date : 2024-05-02 DOI: 10.1071/fp24036

Maira Tanveer, Zain Ul Abidin, Hussam F. Najeeb Alawadi, Ahmad Naeem Shahzad, Athar Mahmood, Bilal Ahmad Khan, Sameer Qari, Hesham Farouk Oraby

{"title":"Recent advances in genome editing strategies for balancing growth and defence in sugarcane (Saccharum officinarum)","authors":"Maira Tanveer, Zain Ul Abidin, Hussam F. Najeeb Alawadi, Ahmad Naeem Shahzad, Athar Mahmood, Bilal Ahmad Khan, Sameer Qari, Hesham Farouk Oraby","doi":"10.1071/fp24036","DOIUrl":"https://doi.org/10.1071/fp24036","url":null,"abstract":"Sugarcane (Saccharum officinarum) has gained more attention worldwide in recent decades because of its importance as a bioenergy resource and in producing table sugar. However, the production capabilities of conventional varieties are being challenged by the changing climates, which struggle to meet the escalating demands of the growing global population. Genome editing has emerged as a pivotal field that offers groundbreaking solutions in agriculture and beyond. It includes inserting, removing or replacing DNA in an organism’s genome. Various approaches are employed to enhance crop yields and resilience in harsh climates. These techniques include zinc finger nuclease (ZFN), transcription activator-like effector nuclease (TALEN) and clustered regularly interspaced short palindromic repeats/associated protein (CRISPR/Cas). Among these, CRISPR/Cas is one of the most promising and rapidly advancing fields. With the help of these techniques, several crops like rice (Oryza sativa), tomato (Solanum lycopersicum), maize (Zea mays), barley (Hordeum vulgare) and sugarcane have been improved to be resistant to viral diseases. This review describes recent advances in genome editing with a particular focus on sugarcane and focuses on the advantages and limitations of these approaches while also considering the regulatory and ethical implications across different countries. It also offers insights into future prospects and the application of these approaches in agriculture.","PeriodicalId":12483,"journal":{"name":"Functional Plant Biology","volume":"33 1","pages":""},"PeriodicalIF":3.0,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140840655","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Acibenzolar-S-methyl promotes wound healing of harvested sweet potatoes (Ipomoea batatas) by regulation of reactive oxygen species metabolism and phenylpropanoid pathway. 通过调节活性氧代谢和苯丙醇途径，Acibenzolar-S-methyl 可促进收获甘薯（Ipomoea batatas）的伤口愈合。

IF 3 4区生物学

Functional Plant Biology Pub Date : 2024-05-01 DOI: 10.1071/FP23319

Caixia Wang, Lei Wei, Xiaoyu Liu, Qi Ye

{"title":"Acibenzolar-S-methyl promotes wound healing of harvested sweet potatoes (Ipomoea batatas) by regulation of reactive oxygen species metabolism and phenylpropanoid pathway.","authors":"Caixia Wang, Lei Wei, Xiaoyu Liu, Qi Ye","doi":"10.1071/FP23319","DOIUrl":"https://doi.org/10.1071/FP23319","url":null,"abstract":"Rapid wound healing is crucial in protecting sweet potatoes (Ipomoea batatas ) against infection, water loss and quality deterioration during storage. The current study investigated how acibenzolar-S-methyl (ASM) treatment influenced wound healing in harvested sweet potatoes by investigating the underlying mechanism. It was found that ASM treatment of wounded sweet potatoes induced a significant accumulation of lignin at the wound sites, which effectively suppressed weight loss. After 4days of healing, the lignin content of ASM-treated sweet potatoes was 41.8% higher than that of untreated ones, and the weight loss rate was 20.4% lower. Moreover, ASM treatment increased the ability of sweet potatoes to defend against wounding stress through enhancing processes such as increased production of reactive oxygen species (ROS), activation of enzymes involved in the ROS metabolism (peroxidase, superoxide dismutase and catalase) and phenylpropanoid pathway (phenylalanine ammonia lyase, cinnamate-4-hydroxylase, 4-coumarate-CoA ligase and cinnamyl alcohol dehydrogenase), and intensive synthesis of phenolics and flavonoids. These results suggest that treating harvested sweet potatoes with ASM promotes wound healing through the activation of the ROS metabolism and phenylpropanoid pathway.","PeriodicalId":12483,"journal":{"name":"Functional Plant Biology","volume":"51 ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141157310","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Corrigendum to: Understanding the role of the fructose-1,6-bisphosphatase gene for enhancing the photosynthetic rate in Arabidopsis thaliana. Corrigendum to：了解果糖-1,6-二磷酸酶基因在提高拟南芥光合速率中的作用。

IF 2.6 4区生物学

Functional Plant Biology Pub Date : 2024-05-01 DOI: 10.1071/FP24034_CO

Fatima Gulzar, Raza Ahmad, Suk-Yoon Kwan, Zulqurnain Khan, Sulaiman Ali Alharbi, Mohmmad Maroof Shah, Shoaib Ur Rehman, Maria Siddique, Mohammad Javed Ansari, Irum Shahzadi, Muhammad Abu Bakar Saddique, Muhmmad Zahid Ishaq, Ummara Waheed

引用次数: 0

High night temperature stress on rice (Oryza sativa) - insights from phenomics to physiology. A review. 水稻（Oryza sativa）的夜间高温胁迫--从表型组学到生理学的启示。综述。

IF 3 4区生物学

Functional Plant Biology Pub Date : 2024-05-01 DOI: 10.1071/FP24057

Awais Riaz, Julie Thomas, Hafiz Haider Ali, Muhammad Saqlain Zaheer, Naushad Ahmad, Andy Pereira

{"title":"High night temperature stress on rice (Oryza sativa) - insights from phenomics to physiology. A review.","authors":"Awais Riaz, Julie Thomas, Hafiz Haider Ali, Muhammad Saqlain Zaheer, Naushad Ahmad, Andy Pereira","doi":"10.1071/FP24057","DOIUrl":"https://doi.org/10.1071/FP24057","url":null,"abstract":"Rice (Oryza sativa ) faces challenges to yield and quality due to urbanisation, deforestation and climate change, which has exacerbated high night temperature (HNT). This review explores the impacts of HNT on the physiological, molecular and agronomic aspects of rice growth. Rise in minimum temperature threatens a potential 41% reduction in rice yield by 2100. HNT disrupts rice growth stages, causing reduced seed germination, biomass, spikelet sterility and poor grain development. Recent findings indicate a 4.4% yield decline for every 1°C increase beyond 27°C, with japonica ecotypes exhibiting higher sensitivity than indica. We examine the relationships between elevated CO2 , nitrogen regimes and HNT, showing that the complexity of balancing positive CO2 effects on biomass with HNT challenges. Nitrogen enrichment proves crucial during the vegetative stage but causes disruption to reproductive stages, affecting grain yield and starch synthesis. Additionally, we elucidate the impact of HNT on plant respiration, emphasising mitochondrial respiration, photorespiration and antioxidant responses. Genomic techniques, including CRISPR-Cas9, offer potential for manipulating genes for HNT tolerance. Plant hormones and carbohydrate enzymatic activities are explored, revealing their intricate roles in spikelet fertility, grain size and starch metabolism under HNT. Gaps in understanding genetic factors influencing heat tolerance and potential trade-offs associated with hormone applications remain. The importance of interdisciplinary collaboration is needed to provide a holistic approach. Research priorities include the study of regulatory mechanisms, post-anthesis effects, cumulative HNT exposure and the interaction between climate variability and HNT impact to provide a research direction to enhance rice resilience in a changing climate.","PeriodicalId":12483,"journal":{"name":"Functional Plant Biology","volume":"51 ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141179405","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

No-tillage enhances soil water storage, grain yield and water use efficiency in dryland wheat (Triticum aestivum) and maize (Zea mays) cropping systems: a global meta-analysis. 免耕可提高旱地小麦（Triticum aestivum）和玉米（Zea mays）种植系统的土壤蓄水量、谷物产量和水分利用效率：一项全球荟萃分析。

IF 3 4区生物学

Functional Plant Biology Pub Date : 2024-05-01 DOI: 10.1071/FP23267

Muhammad Adil, Siqi Lu, Zijie Yao, Cheng Zhang, Heli Lu, Safdar Bashir, Mansoor Maitah, Isma Gul, Sehar Razzaq, Lin Qiu

{"title":"No-tillage enhances soil water storage, grain yield and water use efficiency in dryland wheat (Triticum aestivum) and maize (Zea mays) cropping systems: a global meta-analysis.","authors":"Muhammad Adil, Siqi Lu, Zijie Yao, Cheng Zhang, Heli Lu, Safdar Bashir, Mansoor Maitah, Isma Gul, Sehar Razzaq, Lin Qiu","doi":"10.1071/FP23267","DOIUrl":"10.1071/FP23267","url":null,"abstract":"Climate change significantly affects crop production and is a threat to global food security. Conventional tillage (CT) is the primary tillage practice in rain-fed areas to conserve soil moisture. Despite previous research on the effect of tillage methods on different cropping systems, a comparison of tillage methods on soil water storage, crop yield and crop water use in wheat (Triticum aestivum ) and maize (Zea mays ) under different soil textures, precipitation and temperature patterns is needed. We reviewed 119 published articles and used meta-analysis to assess the effects of three conservation tillage practices (NT, no-tillage; RT, reduced tillage; ST, subsoil tillage), on precipitation storage efficiency (PSE), soil water storage at crop planting (SWSp), grain yield, evapotranspiration (ET) and water use efficiency (WUE) under varying precipitation and temperature patterns and soil textures in dryland wheat and maize, with CT as the control treatment. Conservation tillage methods increased PSE, SWSp, grain yield, ET and WUE in both winter wheat-fallow and spring maize cropping systems. More precipitation water was conserved in fine-textured soils than in medium-textured and coarse-textured soils, which improved ET. Conservation tillage increased soil water conservation and yield under high mean annual precipitation (MAP) and moderate mean annual temperature (MAT) conditions in winter wheat. However, soil water conservation and yield were greater under MAP <400mm and moderate MAT. We conclude that conservation tillage could be promising for increasing precipitation storage, soil water conservation and crop yield in regions with medium to low MAPs and medium to high MATs.","PeriodicalId":12483,"journal":{"name":"Functional Plant Biology","volume":"51 ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140859975","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0