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We also CanFly! The 2nd MexFly drosophila research conference 我们也会飞!第二届墨西哥果蝇研究会议
IF 1.2 4区 生物学
Fly Pub Date : 2017-01-09 DOI: 10.1080/19336934.2016.1271517
F. Missirlis, M. Nahmad
{"title":"We also CanFly! The 2nd MexFly drosophila research conference","authors":"F. Missirlis, M. Nahmad","doi":"10.1080/19336934.2016.1271517","DOIUrl":"https://doi.org/10.1080/19336934.2016.1271517","url":null,"abstract":"ABSTRACT The 2nd Mexican Drosophila Research Conference (MexFly) took place on June 30th and July 1st, 2016 in Mexico City, at the Center for Research and Advanced Studies of the National Polytechnic Institute (Cinvestav). Principal investigators, postdocs, students, and technicians from Drosophila labs across Mexico attended. The guest speaker was Chris Rushlow from New York University, who presented work on Zelda, a key transcriptional activator of the early zygotic genome. Here we provide a brief report of the meeting, which sketches the present landscape of Drosophila research in Mexico. We also provide a brief historical note on one of the pioneers of the field in this country, Victor Salceda, personally trained by Theodosius Dobzhansky. Salceda presented at the meeting an update of his collaborative project with Dobzhansky on the distribution of Drosophila pseudoobscura chromosomal inversions, initiated over forty years ago.","PeriodicalId":12128,"journal":{"name":"Fly","volume":"11 1","pages":"148 - 152"},"PeriodicalIF":1.2,"publicationDate":"2017-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/19336934.2016.1271517","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45934616","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
How tissue damage MET metabolism: Regulation of the systemic damage response. 如何组织损伤MET代谢:调节全身损伤反应。
IF 1.2 4区 生物学
Fly Pub Date : 2017-01-02 Epub Date: 2016-08-11 DOI: 10.1080/19336934.2016.1221549
Soshiro Kashio, Fumiaki Obata, Masayuki Miura
{"title":"How tissue damage MET metabolism: Regulation of the systemic damage response.","authors":"Soshiro Kashio,&nbsp;Fumiaki Obata,&nbsp;Masayuki Miura","doi":"10.1080/19336934.2016.1221549","DOIUrl":"https://doi.org/10.1080/19336934.2016.1221549","url":null,"abstract":"<p><p>Living organisms experience tissue damage from both, the surrounding environment and from inside their bodies. Tissue repair/regeneration is triggered by local tissue injury to restore an injured, or lost, part of the body. Tissue damage results in a series of responses, not only locally but also systemically in distant tissues. In our recent publication, we established a \"dual system\" that induces spatiotemporal tissue damage simultaneously with gene manipulation in surrounding tissues. With this system, we demonstrated that appropriate regulation of methionine metabolism in the fat body is required for tissue repair in Drosophila wing discs, thus highlighting the importance of systemic damage response (SDR) in tissue repair. This \"Extra View\" aims to discuss our recent reports that propose methionine metabolism to be an essential part of SDR, together with related topics in several model organisms.</p>","PeriodicalId":12128,"journal":{"name":"Fly","volume":"11 1","pages":"27-36"},"PeriodicalIF":1.2,"publicationDate":"2017-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/19336934.2016.1221549","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"34695014","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Drosophila yakuba mayottensis, a new model for the study of incipient ecological speciation. 雅库巴马约特果蝇:早期生态物种形成研究的新模式。
IF 1.2 4区 生物学
Fly Pub Date : 2017-01-02 Epub Date: 2016-08-11 DOI: 10.1080/19336934.2016.1221550
Amir Yassin
{"title":"Drosophila yakuba mayottensis, a new model for the study of incipient ecological speciation.","authors":"Amir Yassin","doi":"10.1080/19336934.2016.1221550","DOIUrl":"https://doi.org/10.1080/19336934.2016.1221550","url":null,"abstract":"<p><p>A full understanding of how ecological factors drive the fixation of genetic changes during speciation is obscured by the lack of appropriate models with clear natural history and powerful genetic toolkits. In a recent study, we described an early stage of ecological speciation in a population of the generalist species Drosophila yakuba (melanogaster subgroup) on the island of Mayotte (Indian Ocean). On this island, flies are strongly associated with the toxic fruits of noni (Morinda citrifolia) and show a partial degree of pre-zygotic reproductive isolation. Here, I mine the nuclear and mitochondrial genomes and provide a full morphological description of this population. Only 29 nuclear sites (< 4 × 10<sup>-7</sup> of the genome) are fixed in this population and absent from 3 mainland populations and the closest relative D. santomea, but no mitochondrial or morphological character distinguish Mayotte flies from the mainland. This result indicates that physiological and behavioral traits may evolve faster than morphology at the early stages of speciation. Based on these differences, the Mayotte population is designated as a new subspecies, Drosophila yakuba mayottensis subsp. nov., and its strong potential in understanding the genetics of speciation and plant-insect interactions is discussed.</p>","PeriodicalId":12128,"journal":{"name":"Fly","volume":"11 1","pages":"37-45"},"PeriodicalIF":1.2,"publicationDate":"2017-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/19336934.2016.1221550","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"34389019","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
The beneficial role of extracellular reactive oxygen species in apoptosis-induced compensatory proliferation. 细胞外活性氧在凋亡诱导的代偿性增殖中的有益作用。
IF 1.2 4区 生物学
Fly Pub Date : 2017-01-02 Epub Date: 2016-08-15 DOI: 10.1080/19336934.2016.1222997
Neha Diwanji, Andreas Bergmann
{"title":"The beneficial role of extracellular reactive oxygen species in apoptosis-induced compensatory proliferation.","authors":"Neha Diwanji,&nbsp;Andreas Bergmann","doi":"10.1080/19336934.2016.1222997","DOIUrl":"https://doi.org/10.1080/19336934.2016.1222997","url":null,"abstract":"<p><p>Apoptosis-induced proliferation (AiP) maintains tissue homeostasis following massive stress-induced cell death. During this phenomenon, dying cells induce proliferation of the surviving cells to compensate for the tissue loss, and thus restore organ size. Along with wound healing and tissue regeneration, AiP also contributes to tumor repopulation following radiation or chemotherapy. There are several models of AiP. Using an \"undead\" AiP model that causes hyperplastic overgrowth of Drosophila epithelial tissue, we recently demonstrated that extracellular reactive oxygen species (eROS) are produced by undead epithelial cells, and are necessary for inducing AiP and overgrowth. Furthermore, hemocytes, the Drosophila blood cells, are seen adjacent to the undead epithelial tissue, and may secrete the TNF ortholog Eiger that signals through the TNF receptor to active Jun-N-terminal kinase (JNK) in the undead tissue and induce proliferation. We propose that undead epithelial tissue triggers an inflammatory response that resembles recruitment of macrophages to human epithelial tumors, and that these tumor-associated macrophages release signals for proliferation and tumor growth of the epithelium. This Extra View article summarizes these recent findings with a focus on the role of eROS for promoting regeneration and inflammation-induced tumorigenesis.</p>","PeriodicalId":12128,"journal":{"name":"Fly","volume":"11 1","pages":"46-52"},"PeriodicalIF":1.2,"publicationDate":"2017-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/19336934.2016.1222997","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"34347642","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 28
From the editors 来自编辑
IF 1.2 4区 生物学
Fly Pub Date : 2017-01-02 DOI: 10.1080/19336934.2016.1276793
Blandine Lapercheis
{"title":"From the editors","authors":"Blandine Lapercheis","doi":"10.1080/19336934.2016.1276793","DOIUrl":"https://doi.org/10.1080/19336934.2016.1276793","url":null,"abstract":"Blandine Lapercheis professor (Maître de conférences habilitée à diriger des recherches) of Economics and Vice Director of the Research Unit on Industry and Innovation at the University of Littoral Côte d’Opale, France. She specializes in industrial economics and the economics of innovation. She has recently published Firm and Market: Reading Galbraith(in French) and is joint author with Dimitri Uzunidis of John Kenneth Galbraith and the Future of Economics(in English).","PeriodicalId":12128,"journal":{"name":"Fly","volume":"11 1","pages":"1 - 2"},"PeriodicalIF":1.2,"publicationDate":"2017-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/19336934.2016.1276793","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46421410","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dpr-DIP matching expression in Drosophila synaptic pairs. 果蝇突触对中dprp - dip匹配表达。
IF 1.2 4区 生物学
Fly Pub Date : 2017-01-02 Epub Date: 2016-07-22 DOI: 10.1080/19336934.2016.1214784
Marta Morey
{"title":"Dpr-DIP matching expression in Drosophila synaptic pairs.","authors":"Marta Morey","doi":"10.1080/19336934.2016.1214784","DOIUrl":"https://doi.org/10.1080/19336934.2016.1214784","url":null,"abstract":"<p><p>Neurons form precise patterns of connections. The cellular recognition mechanisms regulating the selection of synaptic partners are poorly understood. As final mediators of cell-cell interactions, cell surface and secreted molecules (CSMs) are expected to play important roles in this process. To gain insight into how neurons discriminate synaptic partners, we profiled the transcriptomes of 7 closely related neurons forming distinct synaptic connections in discrete layers in the medulla neuropil of the fly visual system. Our sequencing data revealed that each one of these neurons expresses a unique combination of hundreds of CSMs at the onset of synapse formation. We show that 21 paralogs of the defective proboscis extension response (Dpr) family are expressed in a unique cell-type-specific fashion, consistent with the distinct connectivity pattern of each neuron profiled. Expression analysis of their cognate binding partners, the 9 members of the Dpr interacting protein (DIP) family, revealed complementary layer-specific expression in the medulla, suggestive of interactions between neurons expressing Dpr and those expressing DIP in the same layer. Through coexpression analysis and correlation to connectome data, we identify neurons expressing DIP as a subset of the synaptic partners of the neurons expressing Dpr. We propose that Dpr-DIP interactions regulate patterns of connectivity between the neurons expressing them.</p>","PeriodicalId":12128,"journal":{"name":"Fly","volume":"11 1","pages":"19-26"},"PeriodicalIF":1.2,"publicationDate":"2017-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/19336934.2016.1214784","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"34698462","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Tools and strategies for scarless allele replacement in Drosophila using CRISPR/Cas9. 利用 CRISPR/Cas9 在果蝇中实现无痕等位基因替换的工具和策略。
IF 1.2 4区 生物学
Fly Pub Date : 2017-01-02 Epub Date: 2016-08-05 DOI: 10.1080/19336934.2016.1220463
Abigail M Lamb, Elizabeth A Walker, Patricia J Wittkopp
{"title":"Tools and strategies for scarless allele replacement in Drosophila using CRISPR/Cas9.","authors":"Abigail M Lamb, Elizabeth A Walker, Patricia J Wittkopp","doi":"10.1080/19336934.2016.1220463","DOIUrl":"10.1080/19336934.2016.1220463","url":null,"abstract":"<p><p>Genome editing via the CRISPR/Cas9 RNA-guided nuclease system has opened up exciting possibilities for genetic analysis. However, technical challenges associated with homology-directed repair have proven to be roadblocks for producing changes in the absence of unwanted, secondary mutations commonly known as \"scars.\" To address these issues, we developed a 2-stage, marker-assisted strategy to facilitate precise, \"scarless\" edits in Drosophila with a minimal requirement for molecular screening. Using this method, we modified 2 base pairs in a gene of interest without altering the final sequence of the CRISPR cut sites. We executed this 2-stage allele swap using a novel transformation marker that drives expression in the pupal wings, which can be screened for in the presence of common eye-expressing reporters. The tools we developed can be used to make a single change or a series of allelic substitutions in a region of interest in any D. melanogaster genetic background as well as in other Drosophila species.</p>","PeriodicalId":12128,"journal":{"name":"Fly","volume":"11 1","pages":"53-64"},"PeriodicalIF":1.2,"publicationDate":"2017-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5354236/pdf/kfly-11-01-1220463.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"34733689","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The translation factors of Drosophila melanogaster. 黑腹果蝇的翻译因子。
IF 1.2 4区 生物学
Fly Pub Date : 2017-01-02 Epub Date: 2016-08-05 DOI: 10.1080/19336934.2016.1220464
Steven J Marygold, Helen Attrill, Paul Lasko
{"title":"The translation factors of Drosophila melanogaster.","authors":"Steven J Marygold,&nbsp;Helen Attrill,&nbsp;Paul Lasko","doi":"10.1080/19336934.2016.1220464","DOIUrl":"https://doi.org/10.1080/19336934.2016.1220464","url":null,"abstract":"<p><p>Synthesis of polypeptides from mRNA (translation) is a fundamental cellular process that is coordinated and catalyzed by a set of canonical 'translation factors'. Surprisingly, the translation factors of Drosophila melanogaster have not yet been systematically identified, leading to inconsistencies in their nomenclature and shortcomings in functional (Gene Ontology, GO) annotations. Here, we describe the complete set of translation factors in D. melanogaster, applying nomenclature already in widespread use in other species, and revising their functional annotation. The collection comprises 43 initiation factors, 12 elongation factors, 3 release factors and 6 recycling factors, totaling 64 of which 55 are cytoplasmic and 9 are mitochondrial. We also provide an overview of notable findings and particular insights derived from Drosophila about these factors. This catalog, together with the incorporation of the improved nomenclature and GO annotation into FlyBase, will greatly facilitate access to information about the functional roles of these important proteins.</p>","PeriodicalId":12128,"journal":{"name":"Fly","volume":"11 1","pages":"65-74"},"PeriodicalIF":1.2,"publicationDate":"2017-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/19336934.2016.1220464","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"34734948","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 15
Infection avoidance behavior: Viral exposure reduces the motivation to forage in female Drosophila melanogaster. 感染回避行为:病毒暴露降低雌性黑腹果蝇觅食的动机。
IF 1.2 4区 生物学
Fly Pub Date : 2017-01-02 Epub Date: 2016-06-30 DOI: 10.1080/19336934.2016.1207029
Pedro F Vale, Michael D Jardine
{"title":"Infection avoidance behavior: Viral exposure reduces the motivation to forage in female Drosophila melanogaster.","authors":"Pedro F Vale,&nbsp;Michael D Jardine","doi":"10.1080/19336934.2016.1207029","DOIUrl":"https://doi.org/10.1080/19336934.2016.1207029","url":null,"abstract":"<p><p>Infection avoidance behaviors are the first line of defense against pathogenic encounters. Behavioral plasticity in response to internal or external cues of infection can therefore generate potentially significant heterogeneity in infection. We tested whether Drosophila melanogaster exhibits infection avoidance behavior, and whether this behavior is modified by prior exposure to Drosophila C Virus (DCV) and by the risk of DCV encounter. We examined 2 measures of infection avoidance: (1) the motivation to seek out food sources in the presence of an infection risk and (2) the preference to land on a clean food source over a potentially infectious source. While we found no evidence for preference of clean food sources over potentially infectious ones, previously exposed female flies showed lower motivation to pick a food source when presented with a risk of encountering DCV. We discuss the relevance of behavioral plasticity during foraging for host fitness and pathogen spread.</p>","PeriodicalId":12128,"journal":{"name":"Fly","volume":"11 1","pages":"3-9"},"PeriodicalIF":1.2,"publicationDate":"2017-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/19336934.2016.1207029","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"34624892","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 28
Ectoparasitic mites and their Drosophila hosts. 外寄生螨及其寄主果蝇。
IF 1.2 4区 生物学
Fly Pub Date : 2017-01-02 Epub Date: 2016-08-19 DOI: 10.1080/19336934.2016.1222998
Alejandra Perez-Leanos, Mariana Ramirez Loustalot-Laclette, Nestor Nazario-Yepiz, Therese Ann Markow
{"title":"Ectoparasitic mites and their Drosophila hosts.","authors":"Alejandra Perez-Leanos,&nbsp;Mariana Ramirez Loustalot-Laclette,&nbsp;Nestor Nazario-Yepiz,&nbsp;Therese Ann Markow","doi":"10.1080/19336934.2016.1222998","DOIUrl":"https://doi.org/10.1080/19336934.2016.1222998","url":null,"abstract":"<p><p>Only two parasite interactions are known for Drosophila to date: Allantonematid nematodes associated with mycophagous Drosophilids and the ectoparasitic mite Macrocheles subbadius with the Sonoran Desert endemic Drosophila nigrospiracula. Unlike the nematode-Drosophila association, breadth of mite parasitism on Drosophila species is unknown. As M. subbadius is a generalist, parasitism of additional Drosophilids is expected. We determined the extent and distribution of mite parasitism in nature Drosophilids collected in Mexico and southern California. Thirteen additional species of Drosophilids were infested. Interestingly, 10 belong to the repleta species group of the subgenus Drosophila, despite the fact that the majority of flies collected were of the subgenus Sophophora. In all cases but 2, the associated mites were M. subbadius. Drosophila hexastigma was found to have not only M. subbadius, but another Mesostigmatid mite, Paragarmania bakeri, as well. One D. hydei was also found to have a mite from genus Lasioseius attached. In both choice and no-choice experiments, mites were more attracted to repleta group species than to Sophophoran. The extent of mite parasitism clearly is much broader than previously reported and suggests a host bias mediated either by mite preference and/or some mechanism of resistance in particular Drosophilid lineages.</p>","PeriodicalId":12128,"journal":{"name":"Fly","volume":"11 1","pages":"10-18"},"PeriodicalIF":1.2,"publicationDate":"2017-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/19336934.2016.1222998","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"34319948","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 16
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