E-Journal Menara Perkebunan最新文献

{"title":"Determination of the optimum initial callus weight for the efficient propagation of sugarcane in temporary immersion bioreactor","authors":"R. T. Saptari, I. Riyadi, Masna Maya Sinta, M. E. Prasetyo, Sylvia Lindawati, S. Sumaryono","doi":"10.22302/iribb.jur.mp.v90i2.505","DOIUrl":"https://doi.org/10.22302/iribb.jur.mp.v90i2.505","url":null,"abstract":"AbstrakBioreaktor perendaman sesaat (BPS) telah digunakan secara luas untuk propagasi skala massal berbagai tanaman penting, termasuk tanaman tebu. BPS menyediakan sistem kultur semi-otomatis dan kondisi optimal bagi pertumbuhan tanaman. Beberapa faktor menentukan pertumbuhan tanaman pada BPS, salah satunya densitas dari eksplan. Oleh karena itu, penelitian dilakukan untuk menentukan bobot awal yang optimal untuk kalus tebu yang dikulturkan pada BPS, serta mengevaluasi pengaruh perbedaan bobot awal kalus tersebut terhadap proliferasi dan regenerasi kalus tebu. Kalus tebu diinduksi dari daun muda yang masih menggulung dari empat varietas tebu unggul Indonesia. Bobot awal kalus yang dikultur ke dalam bejana TIB yaitu 0,05 g; 0,1 g; 0,2 g; 0,5 g; dan 1,0 g untuk setiap bejana. Kalus kemudian melalui tahap proliferasi pada BPS sebanyak tiga siklus, kemudian kalus diregenerasi pada BPS dengan perlakuan auksin dan sitokinin. Hasil penelitian menunjukkan bahwa 0,2 g merupakan bobot awal kalus yang efisien untuk proliferasi kalus tebu pada TIB, dimana eksponensial multiplikasi kalus tercapai pada bobot awal tersebut, yaitu untuk masing-masing varietas 130,3 kali (PSKA 942), 136,8 kali (PS 094), 21,3 (PS 881), dan 12,9 kali (PS 091) setelah 12 minggu. Densitas kalus pada TIB berkorelasi negatif dengan karakteristik fisikokimia medium. Hal ini menggambarkan variasi intensitas pertumbuhan dan metabolisme kalus dengan adanya perbedaan densitas pada BPS. Penggunaan BAP 0,2 mg L-1 bersama kinetin 0,2 mg L-1 paling sesuai untuk memacu regenerasi kalus tebu dengan menghasilkan jumlah tunas terbanyak dalam waktu relatif lebih cepat (1 – 2 minggu lebih cepat) dibandingkan perlakuan lainnya dan dengan tingkat kejadian pencoklatan yang rendah.[Kata kunci: kultur in vitro, kultur cair, proliferasi]AbstractTemporary immersion bioreactor (TIB) has been utilized for the mass-scale propagation of many important plants, including sugarcane. TIB facilitates a semiautomated culture system and provides optimal conditions for plant growth. Several factors determine plant growth in the TIB, such as explant density. Therefore, an experiment was carried out to determine the optimal initial weight of sugarcane calli and to evaluate its effect on the proliferation and regeneration in TIB. Sugarcane calli were induced from spindle leaves isolated from four Indonesian prime sugarcane varieties. The initial weights of the calli cultured in the TIB flasks were 0.05 g, 0.1 g, 0.2 g, 0.5 g and 1.0 g per flask. The calli were proliferated through three cycles in TIB, and subsequently regenerated in TIB with auxin and cytokinin treatments. The results of the experiments showed that 0.2 g was the most efficient initial weight for sugarcane callus proliferation in the TIB, resulting in an exponential multiplication rate of 130.3-fold (PSKA 942), 136.8-fold (PS 094), 21.3-fold (PS 881), and 12.9-fold (PS 091) within 12 weeks. In the TIB, callus density showed a negative correlation with the ","PeriodicalId":11660,"journal":{"name":"E-Journal Menara Perkebunan","volume":"46 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-10-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"73856425","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Aplikasi kitosan untuk penekanan kejadian penyakit dan peningkatan hasil panen tanaman padi (Oryza sativa L.)","authors":"S. Wahyuni, Ciptadi Ahmad Yusup, Agustin Sri Mulyatni, Deden Dewantara Eris, Priyono Priyono, S. Siswanto","doi":"10.22302/iribb.jur.mp.v90i2.484","DOIUrl":"https://doi.org/10.22302/iribb.jur.mp.v90i2.484","url":null,"abstract":"Chitosan is a derivative compound from chitin that has potential as a biopesticide and biostimulant. This research aimed to analyze the effect of chitosan’s soluble liquid (SL) on the disease suppression and yield of rice.  This research was conducted in two locations: the first was at Nglawak Village, Nganjuk District, East Java, and the second was at Harjasari Village, Tegal District, Central Java, in dry season of 2020. Chitosan SL application was carried out by foliar spray on rice plants at 2, 6, and 9 weeks after planting with the treatment of Chitosan SL 25 ml L-1 (P1), Chitosan SL 25 ml L-1+ synthetic pesticides (P2), synthetic pesticides application as control (P0). Each treatment was replicated nine times in each location. The vegetative parameters observed consist of leaf color, number of tillers, and plant height, while the number of productive tillers was observed during the harvesting period. The observed disease incidence was bacterial leaf blight, sheath blight, and blast. The result showed that the application of Chitosan SL significantly affected disease suppression (sheath blight) and yield compared to control, and there was no significant effect between P1 and P2. The application of Chitosan SL could suppress sheath blight disease by up to 45% and increase crop yields by up to 25%. Abstrak Kitosan merupakan senyawa turunan dari kitin yang memiliki potensi sebagai biopestisida dan juga biostimulan. Penelitian ini bertujuan untuk menguji pengaruh aplikasi kitosan soluble liquid (SL) terhadap kejadian penyakit dan hasil panen padi.  Pengujian dilakukan di dua lokasi, yakni di Desa Nglawak, Kabupaten Nganjuk Jawa Timur dan di Desa Harjasari, Kabupaten Tegal, Jawa Tengah pada musim kemarau tahun 2020. Aplikasi kitosan SL dilakukan dengan penyemprotan daun pada 2, 6, dan 9 minggu setelah tanam, dengan perlakuan meliputi: kitosan SL  25 mL L-1(P1), kitosan SL 25 ml L-1+ pestisida kimia (P2), dan pestisida sintetik saja sebagai kontrol (P0). Setiap perlakuan diulang sebanyak sembilan kali pada masing-masing lokasi. Parameter vegetatif yang diamati meliputi warna daun, jumlah anakan dan tinggi tanaman, sedangkan jumlah anakan produktif diamati pada saat panen. Kejadian penyakit yang diamati adalah hawar daun bakteri, hawar daun pelepah, dan blas. Hasil pengamatan menunjukkan bahwa aplikasi kitosan SL pada tanaman padi berpengaruh nyata terhadap penekanan kejadian penyakit hawar pelepahdan hasil panen dibandingkan kontrol, serta tidak ada perbedaan pengaruh yang nyata antara P1 dengan P2. Aplikasi kitosan SL mampu menekan kejadian penyakit hawar pelepah hingga 45% dan mampu meningkatkan hasil panen hingga 25%. ","PeriodicalId":11660,"journal":{"name":"E-Journal Menara Perkebunan","volume":"11 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-10-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84810273","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Sintesis, karakterisasi, dan pengujian aktifitas antifungi nanopartikel perak – cysteine secara in vitro terhadap Ganoderma boninense","authors":"Yora Faramitha, Firda Dimawarnita, Haryo Tejo Prakoso, S. Siswanto","doi":"10.22302/iribb.jur.mp.v90i2.501","DOIUrl":"https://doi.org/10.22302/iribb.jur.mp.v90i2.501","url":null,"abstract":"The application of silver nanoparticles as antifungal in the plantation sector is very potential to be developed. Silver nanoparticles conjugated with cysteine have the advantage of having low toxicity, making them safer for the environment. Until now, basal stem rot disease caused by apathogenic fungus, Ganoderma boninense, has become a serious problem and causes economic losses in oil palm plantations. Studies related to the effect of silver nanoparticles on the control of G. boninense have not been widely studied. Therefore, the objectives of this research are to evaluate the stability of silver nanoparticles conjugated with L-cysteine (Cys-AgNPs) and to examine Cys-AgNPs ability in inhibiting the mycelial growth of G. boninense. Cysteine-silver nanoparticles were characterized using UV-Vis, particle size analyzer (PSA), and Fourier Transform Infrared (FTIR). The assay of Cys-AgNPs activity as an antifungal against G. boninense was carried out in vitro. As a result, cysteine-silver nanoparticles were successfully synthesized by producing a brownish-yellow color and maximum localized surface plasmon resonance (LSPR) absorbance in the range of 402 nm. There was an effect of L-cysteine concentration on the stability of Cys-AgNPs. The use of 0.01 M L-cysteine concentration resulted in Cys-AgNPs that were more stable and smaller in particle size than 0.001 M L-cysteine. Silver-cysteine nanoparticles could inhibit the growth of G. boninense mycelia, with a highest percentage of mycelia inhibition observed from the application of Cys-AgNPs at 8 mg L-1 on day 6 (65,17%).  AbstrakAplikasi nanopartikel perak sebagai antifungi di bidang perkebunan sangat potensial untuk dikembangkan. Nanopartikel perak yang dikonjugasi dengan L-cysteine memiliki keunggulan yaitu sifat toksisitas yang rendah sehingga lebih aman untuk lingkungan. Hingga saat ini, penyakit busuk pangkal batang pada perkebunan kelapa sawit yang disebabkan oleh cendawan patogen Ganoderma boninense masih menjadi permasalahan yang serius dan menyebabkan kerugian secara ekonomi. Studi terkait pengaruh nanopartikel perak terhadap pengendalian G. boninense masih belum banyak dikaji. Oleh karena itu, penelitian ini bertujuan untuk mengevaluasi stabilitas nanopartikel perak yang dikonjugasikan dengan L-cysteine (Cys-AgNPs) dan menguji kemampuannya dalam menghambat pertumbuhan miselia G. boninense. Nanopartikel perak-cysteine dikarakterisasi menggunakan UV-Vis, particle size analyzer (PSA), dan Fourier Transform Infrared (FTIR). Uji aktivitas Cys-AgNPs sebagai antifungi terhadap G. boninense dilakukan secara in vitro.  Sebagai hasil, nanopartikel perak-cysteine berhasil disintesis dengan menghasilkan warna kuning kecoklatan dan absorbansi localized surface plasmon resonance (LSPR) maksimum pada kisaran 402 nm. Terdapat pengaruh konsentrasi L-cysteine terhadap stabilitas Cys-AgNPs. Penggunaan konsentrasi L-cysteine 0,01 M menghasilkan Cys-AgNPs yang lebih stabil dan ukuran partikel yang lebih kecil di","PeriodicalId":11660,"journal":{"name":"E-Journal Menara Perkebunan","volume":"38 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-10-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84385062","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Application of silica solubilizing bacteria increases water efficiency in maize","authors":"I. P. Sari, Y. Lestari, H. Hamim, L. Santi","doi":"10.22302/iribb.jur.mp.v90i1.493","DOIUrl":"https://doi.org/10.22302/iribb.jur.mp.v90i1.493","url":null,"abstract":"Abstract Global climate change will result in decreased rainfall and increased evaporation. Thus, it is estimated that the frequency and severity of drought stress will get worse. Silica increases plant drought resistance by improving water use efficiency in plants. Despite its abundant availability in soil, most silica sources are not available to plants due to their low solubility. Silica solubilizing bacteria (SSB) have an important role in increasing the available silica. This study aims to observe the silica solubilizing activity of three SSB isolates collections of PPBBI on insoluble silica sources, including magnesium trisilicate, quartz, and feldspar, and see their effects on increasing water use efficiency in corn plants via drought experiments. SSB activity was measured using the modified standard method of 4500-SiO2 D Heteropoly blue. Drought control in the greenhouse follows the Snow and Tingey system. The experimental design used a completely randomized design factorial with irrigation conditions and SSB species as variables. Water use efficiency is measured in real-time with a sap flow meter. The results showed that SSB Pseudomonas fluorescens-B41 had the highest silica dissolving activity 81.93 ppm on Mg-trisilicate. The application of SSB can reduce maize transpiration rate and increase water use efficiency up to 84% under moderate drought stress and 46% under normal irrigation, but in severe drought stress, where the nutrient solution was maintained at 25 cm from plant root, water use efficiency was not significant. This is suspected due to the extreme drought conditions in the potting soil so that the applied SSB cannot maintain its activities.[Keywords: aquaporin, drought stress, Snow and Tingey system, SSB, quartz]AbstrakPerubahan iklim global mengakibatkan penurunan curah hujan dan peningkatan evaporasi, sehingga diperkirakan frekuensi dan tingkat keparahan cekaman kekeringan akan semakin tinggi. Silika (Si) diketahui dapat meningkatkan ketahanan tanaman terhadap kekeringan dengan cara memperbaiki efisiensi penggunaan air pada tanaman. Meskipun ketersediaanya berlimpah di tanah, sebagian besar Si dalam bentuk yang tidak tersedia bagi tanaman, karena sifat kelarutannya yang rendah. Untuk meningkatkan silika tersedia bagi tanaman, bakteri pelarut silika (BPS) memiliki peranan yang penting. Penelitian ini bertujuan menguji aktivitas pelarutan silika dari tiga koleksi isolat BPS Pusat Penelitian Bioteknologi dan Bioindustri Indonesia (PPBBI) pada sumber silika tidak larut berupa magnesium trisilikat, kuarsa, dan feldspar, serta melihat pengaruh aplikasi BPS terhadap efisiensi penggunaan air pada tanaman jagung yang diberi perlakuan cekaman kekeringan. Aktivitas pelarutan silika diukur menggunakan modifikasi metode standar 4500-SiO2 D Heteropoly blue. Pengendalian kekeringan di rumah kaca mengadaptasi sistem Snow dan Tingey. Rancangan percobaan menggunakan rancangan acak lengkap faktorial dengan kondisi kekeringan dan jenis bakter","PeriodicalId":11660,"journal":{"name":"E-Journal Menara Perkebunan","volume":"46 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-04-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74154779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Keragaan vegetatif dan generatif pada fase pembungaan awal kelapa Genjah kopyor asal kultur embrio di Bogor, Jawa Barat","authors":"Muhammad Eko Prasetyo, Imron Riyadi, Sumaryono Sumaryono","doi":"10.22302/iribb.jur.mp.v90i1.492","DOIUrl":"https://doi.org/10.22302/iribb.jur.mp.v90i1.492","url":null,"abstract":"The performance of kopyor Dwarf coconuts from embryo culture in the field has not been reported. This study was conducted to determine the difference in vegetative and generative performances of three fruit color phenotypes (brown, green, and yellow) of kopyor Dwarf coconuts in the first year after the first flower appeared. The coconuts were planted in Bogor, West Java at 260 masl with average temperature 26.9 ºC and average rainfall 4,300 mm/year. Each  color phenotype was represented by 20 kopyor coconut trees from the same planting date that had not been flowering yet. When the first flowers appeared, Kopyor Brown Dwarf (KBD) had 14.6 fronds, while Kopyor Yellow Dwarf (KYD) and Kopyor Green Dwarf (KGD) had 15.5 and 17.1 fronds respectively. Other vegetative components when the first flower appeared were not significantly difference among the three color phenotypes such as stem girth (90.7-99.2 cm), stem height (18.6-23.9 cm), frond length (3.9-4.2 m) and canopy diameter (5.8-6.1 m). KBD coconuts started flowering faster than that of KGD and KYD. The numbers of flowers formed in the first year of flowering were 15 to 17 flowers per tree. There was an initial sharp decrease in the survival of young fruits, but this levelled off after 2-3 months. On average 18-22 fruits per bunch at flowering decreased to 5-6 fruits per bunch at maturity. The survival of fruits in KGD (6.2 fruits per bunch) was higher than KBD (4.0 fruits) and KYD (4.5 fruits) at 11 months after flowering. The average fruit size and weight of brown phenotype were higher than green and yellow phenotypes. The mature brown fruits had a lower husk percentage, but higher shell and fruit meat percentages than those of the green and yellow fruits.[Keywords: fruit color phenotype, kopyor Dwarf coconut, fruit abortion, fruit quality] AbstrakKeragaan kelapa Genjah kopyor asal kultur embrio di lapang belum pernah dilaporkan. Penelitian ini dilakukan untuk mengamati perbedaan keragaan vegetatif dan generatif tiga varietas kelapa Genjah kopyor yang berbeda dari warna buah (coklat, hijau dan kuning) pada tahun pertama sejak bunga pertama muncul. Kelapa tersebut ditanam di Bogor, Jawa Barat pada 260 mdpl dengan rerata suhu 26,9 ºC dan curah hujan 4.300 mm/tahun. Tiap fenotipe warna diwakili oleh 20 pohon kelapa kopyor berumur sama yang belum berbunga. Pada saat bunga pertama muncul, kelapa Genjah Coklat Kopyor (GCK) memiliki 14,6 pelepah daun, sedangkan Genjah Kuning Kopyor (GKK) dan Genjah Hijau Kopyor (GHK) berturut-turut memiliki 15,5 dan 17,1 pelepah. Parameter vegetatif lain ketika bunga pertama muncul tidak berbeda nyata antar fenotipe warna misalnya lingkar batang (90,7-99,2 cm), tinggi batang (18,6-23,9 cm), panjang pelepah (3,9-4,2 m) dan diameter tajuk (5,8-6,1 m). GCK mulai berbunga lebih cepat dibandingkan dengan GHK dan GKK. Jumlah bunga yang terbentuk selama satu tahun pertama pembungaan adalah 15 sampai 17 bunga per pohon. Jumlah buah muda yang bertahan hidup menurun tajam pada ","PeriodicalId":11660,"journal":{"name":"E-Journal Menara Perkebunan","volume":"1 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-04-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89249835","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Techno-economic evaluation of integrated levulinic acid, formic acid, and furfural plant from oil palm empty fruit bunch with pre-treatment variations","authors":"M. Gozan, Denia Apriliani Rahman, A. F. M. Harahap","doi":"10.22302/iribb.jur.mp.v90i1.485","DOIUrl":"https://doi.org/10.22302/iribb.jur.mp.v90i1.485","url":null,"abstract":"AbstractLevulinic acid, a platform biochemical, might be utilized as a biodiesel additive in biodiesel production. Global demand for levulinic acids was 3,820 tons in 2020, while the roadmap target of biodiesel in Indonesia will reach 20% of diesel consumption in 2016-2025. These figures become the considerations for establishing the levulinic acid plant in Indonesia. The study's focus analyzed the economic viability of integrated levulinic acid production plant design based on Oil Palm Empty Fruit Bunches (OPEFB) in Indonesia. OPEFB was selected as raw material due to the enormous solid waste generated by oil palm plantations. In the plant design, software SuperPro Designer 9.0's used as a process tool simulator. The economic analysis showed the Net Present Value (NPV) as the US $ 548,850,764, an Internal Rate of Return (IRR) of 24.75%, and a payback period (PBP) estimated within six years with a Minimum Attractive Rate Return (MARR) of 6.1%. The optimal production capacities of levulinic acid, furfural, and formic acid are 12,425; 15,105 and 6,074 tonnes/year.[Keywords: cellulose, delignification, levulinic acid, OPEFB, simulation] AbstrakAsam levulinat, sebuah platform biokimia, dapat digunakan sebagai aditif biodiesel dalam produksi biodiesel. Permintaan global asam levulinat mencapai 3.820 ton pada 2020, sedangkan roadmap target biodiesel di Indonesia mencapai 20% dari konsumsi solar pada 2016-2025. Angka-angka ini menjadi pertimbangan untuk mendirikan pabrik asam levulinat di Indonesia. Fokus penelitian menganalisis kelayakan ekonomi rancangan pabrik produksi asam levulinat terpadu berbasis Tandan Kosong Kelapa Sawit (TKKS) di Indonesia. TKKS dipilih sebagai bahan baku karena limbah padat yang dihasilkan perkebunan kelapa sawit sangat besar. Dalam perancangan pabrik, software SuperPro Designer 9.0 digunakan sebagai alat simulator proses. Analisis ekonomi menunjukkan Net Present Value (NPV) sebesar US$ 548.850.764, Internal Rate of Return (IRR) 24,75%, dan payback period (PBP) diperkirakan dalam enam tahun dengan Minimum Attractive Rate Return (MARR) 6,1%. Kapasitas produksi optimal asam levulinat, furfural dan asam format masing-masing adalah 12.425; 15.105 dan 6.074 ton/tahun.[Kata kunci: selulosa, delignifikasi, asam levulinat, TKKS, simulasi] ","PeriodicalId":11660,"journal":{"name":"E-Journal Menara Perkebunan","volume":"46 7-8","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-04-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"91495385","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Potensi electronic nose 118 untuk mendeteksi penyakit busuk pangkal batang pada kelapa sawit","authors":"Agustin Sri Mulyatni, Irma Kresnawaty, Deden Dewantara Eris, Tri Panji, Wita Kimberly, H. Widiastuti, P. Priyono, Chotimah Chotimah, K. Triyana","doi":"10.22302/iribb.jur.mp.v90i1.472","DOIUrl":"https://doi.org/10.22302/iribb.jur.mp.v90i1.472","url":null,"abstract":"AbstractBasal stem rot (BSR) disease caused by Ganoderma sp. is a major disease in oil palm. One of the keys to successfully control BSR disease is to detect the pathogenic infections as early as possible. Early detection technique has been developed in this study was using volatile compounds sensors known as an electronic nose, specifically Electronic Nose 118. Plant samples were obtained from roots, stems, leaves, and soils of four plant categories, which were midly, moderately, and severely infected by Ganoderma, and healthy plants. The test results showed that Electronic Nose was able to record the profile of volatile organic compounds (VOC) produced by Ganoderma sp. The Linear Discriminant Analysis (LDA) results showed that the root and stem samples were differentiated in fairly high level of discrimination with values of 89.66% and 94.59% respectively, while for internal validation value were 98.18% and 89.18%. However, for leaf and soil samples, Electronic Nose 118 resulted in low discriminations. The test results show that Electronic Nose 118 can distinguish samples of roots and stems of healthy plant and Ganoderma-infected plant with a high accuracy.[Keywords: Ganoderma, linier discriminant analysis (LDA), pathogen infection, sensor, volatile organic compound] AbstrakPenyakit busuk pangkal batang (BPB) yang disebabkan oleh Ganoderma sp. merupakan  penyakit utama pada kelapa sawit. Salah satu kunci keberhasilan pengendalian penyakit BPB adalah diketahuinya infeksi patogen sedini mungkin. Teknik deteksi dini yang saat ini dikembangkan dalam penelitian ini adalah menggunakan sensor senyawa volatil yang dikenal dengan electronic nose, khususnya Electronic Nose 118. Sampel tanaman diperoleh dari akar, batang, daun, dan tanah dari empat kondisi tanaman, yaitu tanaman yang terinfeksi Ganoderma ringan, sedang, berat dan tanaman sehat. Hasil pengujian menunjukkan bahwa profil senyawa organik volatil yang dihasilkan oleh infeksi Ganoderma sp. dapat ditangkap oleh Electronic Nose 118 dengan baik. Hasil analisis Linear Discriminat Analysis (LDA) menunjukkan bahwa sampel akar dan batang terbedakan dengan tingkat diskriminasi yang cukup tinggi dengan nilai secara berurutan yaitu 89,66% dan 94,59%, sedangkan untuk validasi internal masing-masing 98,18% dan 89,18%. Namun demikian, untuk sampel daun dan tanah, pengujian dengan Electronic Nose 118 menghasilkan tingkat diskriminasi yang rendah. Hasil pengujian menunjukkan Electronic Nose 118 dapat membedakan sampel akar dan batang dari tanaman sehat dan tanaman terserang Ganoderma dengan akurasi tinggi.[Kata kunci : Ganoderma, LDA, infeksi patogen, sensor, senyawa organik volatil]","PeriodicalId":11660,"journal":{"name":"E-Journal Menara Perkebunan","volume":"16 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-04-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"82653806","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Pengaruh kombinasi kitosan soluble liquid dan pestisida sintetik terhadap pertumbuhan dan hasil panen cabai keriting di Nganjuk","authors":"Ciptadi Achmad Yusup, S. Wahyuni, Deden Dewantara Eris, P. Priyono, S. Siswanto","doi":"10.22302/iribb.jur.mp.v90i1.481","DOIUrl":"https://doi.org/10.22302/iribb.jur.mp.v90i1.481","url":null,"abstract":"Abstract Chitosan has the potential as a biostimulant also as an antagonistic agent due to its antimicrobial activity. These dual benefits were the superiority of chitosan and has the potential to be developed further. The objective of this study was to analyze the effect of soluble liquid (SL) chitosan on plant growth and the yield of curly chili. The study was conducted from April-August 2019 in Prambon Subdistrict, Nganjuk District, East Java. The total experimental plot was 2.000 m2 rows with 45 x 70 cm plant spacing. The variety of curly chili used was Kribo with three treatments examined i.e., the application of single chitosan SL (P1), the combination of chitosan SL and synthetic pesticide (P2), and the conventional application of synthetic pesticide that considered as control (K). Each treatment was replicated four times. The application of chitosan SL was conducted at 21, 42, and 63 days after planting (DAP) by foliar spray. The result showed that the application of chitosan SL increased the canopy width by 16,34% and plant height by 11,53% against control at 99 DAP. The number of fruits per plant also increased by 123% on P1 and 20% on P2 treatment. The fruit weight was also increased by 42,6% on P2 and 18% on P1 treatment. The conversion result showed that single chitosan SL application was able to increase the production of curly chili per hectare up to 163%, while the combination of chitosan SL and synthetic pesticide resulted up to 71% increase in curly chili production compared to control.  Chitosan has the potential as a biostimulant also as an antagonistic agent due to its antimicrobial activity. These dual benefits were the superiority of chitosan and potentially to be developed further. The objective of this study was to analyze the effect of soluble liquid (SL) chitosan on the growth and yield of curly chili. The variety of curly chili used was Kribo with three treatments examined i.e. the application of single chitosan SL (P1), the combination of chitosan SL and synthetic pesticide (P2), and the conventional application of synthetic pesticide that considered as control (K). Each treatment was replicated four times. The application of chitosan SL was conducted at 21, 42, and 63 days after planting (DAP), while the application of synthetic pesticide was conducted depending on the field conditions. The plant parameters observed were canopy width, plant height, leaf color, and number, and weight of fruits. The observation results were analyzed using table of variance. The results showed that the application of chitosan SL increased the canopy width by 16.3% and plant height by 11.5% compared to control at 99 DAP. The number of fruits per plant also increased by 123% on P1 and 20% on P2 treatment. The fruit weight was also increased by 42.6% on P2 and 18% on P1 treatment. The conversion result showed that single chitosan SL application was able to increase the yield of curly chili per hectare up to 163%, while the combination of c","PeriodicalId":11660,"journal":{"name":"E-Journal Menara Perkebunan","volume":"13 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-04-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74415542","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"The in silico study of the COBRA gene family in sugarcane related to potential biomass content","authors":"R. Putranto, G. Permatasari, R. T. Saptari","doi":"10.22302/iribb.jur.mp.v90i1.486","DOIUrl":"https://doi.org/10.22302/iribb.jur.mp.v90i1.486","url":null,"abstract":"AbstractSugarcane (Saccharum sp.) is potential as a biofuel and biomaterial source for its high cellulose content. Cellulose is the main constituent of the plant cell wall, as a linear chain arranged in a polysaccharide bundle, called cellulose microfibril. A gene named COBRA has been revealed to play role in the orientation of microfibril and cellulose crystallization. The COBRA gene in the Saccharum spp is under-explored. Therefore, the in silico study was conducted to explore the COBRA gene in Saccharum sp. By comparative genomics methods, the COBRA genes from Arabidopsis sp. (AtCOBLs) were compared to the Saccharum sp. (SoCOBLs). The conserved domain was then identified and the cluster system was constructed under a phylogenetic tree. Furthermore, each SoCOBLs protein was modelled to analyze its structure. According to the analysis, eleven of Saccharum sp. genomic scaffolds were successfully identified. Moreover, conserved domain identification resulted in nine SoCOBLs proteins. The phylogenetic tree showed two main clusters: I and II, differentiating those COBLs families based on the protein sequence, domain motif and amino acid properties. It leads to the variation of SoCOBLs protein structure as the results of the amino acid properties. Overall, the COBRA gene has been identified genomically in Saccharum sp. Yet, the function and tissue-specific expression are still unclear. It was predicted to act as the regulator of microfibril orientation and the cellulose synthesis process. Hence, further analyses by in vitro and in vivo are indispensable.[Keywords: cellulose, comparative genomic, Saccharum sp.]AbstrakTanaman tebu (Saccharum sp.) berpotensi sebagai sumber bahan bakar nabati dan biomaterial karena kandungan selulosanya yang tinggi. Selulosa merupakan komponen utama penyusun dinding sel tanaman, sebagai rantai lurus yang tersusun dalam gugusan polisakarida, yang disebut mikrofibril selulosa. Sebuah gen bernama COBRA telah diketahui berperan dalam menentukan arah mikrofibril dan kristalisasi selulosa. Gen COBRA pada spesies Saccharum spp. belum banyak dipelajari. Oleh karena itu, kajian in silico dilakukan untuk mempelajari gen COBRA pada Saccharum sp. Melalui metode perbandingan genomika, gen COBRA dari Arabidopsis sp. (AtCOBLs) dibandingkan dengan gen COBRA dari Saccharum sp. (SoCOBLs). Domain conserve pada gen kemudian diidentifikasi dan sistem klaster disusun dalam sebuah pohon filogeni. Setelah itu, dibuat model untuk menganalisis struktur dari protein SoCOBL. Dari hasil analisis, sebelas perancah genom Saccharum sp. berhasil diidentifikasi. Kemudian, identifikasi daerah lestari menghasilkan sembilan protein SoCOBL. Pohon filogeni menggambarkan dua klaster utama: I dan II, yang membedakan famili SoCOBLs tersebut berdasarkan sekuens protein, motif domain, dan karakteristik asam amino. Karakteristik asam amino menyebabkan variasi pada struktur protein-protein SoCOBL. Secara umum, gen COBRA telah teridentifikasi pada Saccharum sp., mesk","PeriodicalId":11660,"journal":{"name":"E-Journal Menara Perkebunan","volume":"40 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-04-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"88278124","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Uji molecular docking dan bioinformatika terhadap meniran (Phyllanthus niruri L.) sebagai antivirus SARS-CoV-2 dan antikanker serviks","authors":"Nuha Haifa Arifin, Rifki Febriansah","doi":"10.22302/iribb.jur.mp.v90i1.477","DOIUrl":"https://doi.org/10.22302/iribb.jur.mp.v90i1.477","url":null,"abstract":"Abstract     The SARS-CoV-2 virus is a virus that emerged in late 2019 and has yet to find a cure. On the other hand, the incidence of cervical cancer in women continues to increase along with the emergence of cases of COVID-19 caused by SARS-CoV-2. Based on WHO data in 2020 stated that there were 107 per 72,314 cancer patients infected with SARS-CoV-2. Meniran (Phyllanthus niruri L.) is a herbaceous plant in Indonesia that has secondary metabolites derived from the tannin group, such as corilagin. This compound has the potential to be developed as an antiviral and anticancer agent. Thus, the purpose of this study was to determine the potential of corilagin in meniran herbs to act as an antiviral SARS-CoV-2 and cervical anticancer compared to the drug compounds molnupiravir and paclitaxel through the STITCH & STRING bioinformatics in silico test and molecular docking method. The results of the bioinformatics test of corilagin against the SARS-CoV-2 virus showed predictions of high protein binding to AGTR2 and ENPEP with a docking score of -10.9 and -9.9 kcal/mol, respectively. Meanwhile, cervical cancer cells showed the highest predicted protein binding to IL-10 and MAPK3 with a docking score of -10.5 and -10.8 kcal/mol. The docking score of molnupiravir against the COVID-19 virus protein, AGTR2, and ENPEP were -7.4 and -7.2 kcal/mol, respectively. The docking scores of paclitaxel for IL10 and MAPK3 were -8.2 and -8.9 kcal/mol, respectively. These values indicate that the activity of corilagin with proteins AGTR2, ENPEP, IL10, and MAPK3 has stronger affinity energy than the comparison drugs molnupiravir and paclitaxel. Thus, the corilagin compound from the tannin group in meniran (Phyllanthus niruri L.) has the potential to be developed and formulated as a treatment and prevention of SARS-CoV-2 antiviral and cervical anticancer.[Keywords: corilagin, cervical cancer, Phyllanthus niruri L., SARS-CoV-2] Abstrak      Virus SARS-CoV-2 merupakan virus yang muncul di akhir tahun 2019 dan belum ditemukan pengobatannya. Di sisi lain, terjadinya kasus kanker serviks pada wanita masih terus meningkat beriringan dengan munculnya kasus COVID-19 yang disebabkan oleh SARS-CoV-2. Berdasarkan data studi WHO tahun 2020 menyatakan bahwa terdapat 107 per 72.314 pasien kanker yang terinfeksi SARS-CoV-2. Meniran (Phyllanthus niruri L.) merupakan tanaman herba di Indonesia yang memiliki senyawa metabolit sekunder yang berasal dari golongan tannin seperti corilagin. Senyawa ini memiliki potensi untuk dikembangkan sebagai agen antivirus dan antikanker. Penelitian ini bertujuan untuk mengetahui potensi corilagin yang terkandung pada herba meniran sebagai antivirus SARS-CoV-2 dan antikanker serviks yang dibandingkan dengan senyawa obat molnupiravir dan paclitaxel melalui uji in silico bioinformatika STITCH & STRING serta metode molecular docking. Hasil uji bioinformatika corilagin terhadap virus SARS-CoV-2 menunjukkan prediksi pengikatan protein yang tinggi pada AGTR2 dan ","PeriodicalId":11660,"journal":{"name":"E-Journal Menara Perkebunan","volume":"90 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-04-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83279098","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}