Cytogenetics and cell genetics最新文献

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First report on chicken genes and chromosomes 2000. 鸡基因和染色体首次报道2000。
Cytogenetics and cell genetics Pub Date : 2000-01-01 DOI: 10.1159/000056772
M Schmid, I Nanda, M Guttenbach, C Steinlein, M Hoehn, M Schartl, T Haaf, S Weigend, R Fries, J M Buerstedde, K Wimmers, D W Burt, J Smith, S A'Hara, A Law, D K Griffin, N Bumstead, J Kaufman, P A Thomson, T Burke, M A Groenen, R P Crooijmans, A Vignal, V Fillon, M Morisson, F Pitel, M Tixier-Boichard, K Ladjali-Mohammedi, J Hillel, A Mäki-Tanila, H H Cheng, M E Delany, J Burnside, S Mizuno
{"title":"First report on chicken genes and chromosomes 2000.","authors":"M Schmid, I Nanda, M Guttenbach, C Steinlein, M Hoehn, M Schartl, T Haaf, S Weigend, R Fries, J M Buerstedde, K Wimmers, D W Burt, J Smith, S A'Hara, A Law, D K Griffin, N Bumstead, J Kaufman, P A Thomson, T Burke, M A Groenen, R P Crooijmans, A Vignal, V Fillon, M Morisson, F Pitel, M Tixier-Boichard, K Ladjali-Mohammedi, J Hillel, A Mäki-Tanila, H H Cheng, M E Delany, J Burnside, S Mizuno","doi":"10.1159/000056772","DOIUrl":"https://doi.org/10.1159/000056772","url":null,"abstract":"","PeriodicalId":10982,"journal":{"name":"Cytogenetics and cell genetics","volume":"90 3-4","pages":"169-218"},"PeriodicalIF":0.0,"publicationDate":"2000-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000056772","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21946194","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 363
Assignment of fibroblast growth factor 18 (FGF18) to human chromosome 5q34 by use of radiation hybrid mapping and fluorescence in situ hybridization. 利用辐射杂交定位和荧光原位杂交技术将成纤维细胞生长因子18 (FGF18)定位到人5q34染色体上。
Cytogenetics and cell genetics Pub Date : 2000-01-01 DOI: 10.1159/000056775
T E Whitmore, M F Maurer, S Sexson, F Raymond, D Conklin, T A Deisher
{"title":"Assignment of fibroblast growth factor 18 (FGF18) to human chromosome 5q34 by use of radiation hybrid mapping and fluorescence in situ hybridization.","authors":"T E Whitmore, M F Maurer, S Sexson, F Raymond, D Conklin, T A Deisher","doi":"10.1159/000056775","DOIUrl":"https://doi.org/10.1159/000056775","url":null,"abstract":"FGF18 is a recently discovered member of the fibroblast growth factor family (Deisher et al., 1999). FGF18 has been reported to induce hepatic and intestinal proliferation in vivo (Hu et al., 1998), and to activate neural cell proliferation in vitro (Ohbayashi et al., 1998). Recently, FGF18 was mapped to both human chromosome 14p11 (Hu et al., 1999), and chromosome 5 (Sanger Centre, NCBI GeneMap’99). To help resolve this discrepancy, we carried out radiation hybrid mapping using both the GeneBridge 4 and the Stanford G3 human/hamster radiation hybrid mapping panels and fluorescence in situ hybridization using a human genomic BAC clone containing the FGF18 gene.","PeriodicalId":10982,"journal":{"name":"Cytogenetics and cell genetics","volume":"90 3-4","pages":"231-3"},"PeriodicalIF":0.0,"publicationDate":"2000-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000056775","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21946197","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 10
HP1gamma associates with euchromatin and heterochromatin in mammalian nuclei and chromosomes. hp1γ与哺乳动物细胞核和染色体中的常染色质和异染色质有关。
Cytogenetics and cell genetics Pub Date : 2000-01-01 DOI: 10.1159/000056789
E Minc, J C Courvalin, B Buendia
{"title":"HP1gamma associates with euchromatin and heterochromatin in mammalian nuclei and chromosomes.","authors":"E Minc,&nbsp;J C Courvalin,&nbsp;B Buendia","doi":"10.1159/000056789","DOIUrl":"https://doi.org/10.1159/000056789","url":null,"abstract":"<p><p>Heterochromatin protein 1 (HP1) is a nonhistone chromosomal protein, first identified in Drosophila, that plays a dose-dependent role in gene silencing. Three orthologs, HP1alpha, HP1beta, and HP1gamma, have been characterized in mammals. While HP1alpha and HP1beta have been unambiguously localized in heterochromatin by immunocytochemical methods, HP1gamma has been found either exclusively associated with euchromatin or present in both euchromatin and heterochromatin. Here, using an antibody directed against a peptide epitope at the carboxyl-terminal end of the molecule, we localize HP1gamma in both euchromatin and heterochromatin compartments of interphase nuclei, as well as in the pericentromeric chromatin and arms of mitotic chromosomes of 3T3 cells. This dual location was also observed in nuclei expressing HP1gamma as a fusion protein with green fluorescent protein. In contrast, when the distribution of HP1gamma was analyzed with antibodies directed against an amino-terminal epitope, the protein was detectable in euchromatin and not in heterochromatin, except for transient heterochromatin staining during the late S phase, when the heterochromatin undergoes replication. These data suggest that the controversial immunolocalization of HP1gamma in chromatin is due to the use of antibodies directed against topologically distinct epitopes, those present at the amino-terminal end of the molecule being selectively masked in nonreplicative heterochromatin.</p>","PeriodicalId":10982,"journal":{"name":"Cytogenetics and cell genetics","volume":"90 3-4","pages":"279-84"},"PeriodicalIF":0.0,"publicationDate":"2000-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000056789","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21947039","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 174
Assignment of CDK5R2 coding for the cyclin-dependent kinase 5, regulatory subunit 2 (NCK5AI protein) to human chromosome band 2q35 by fluorescent in situ hybridization. CDK5R2编码周期蛋白依赖性激酶5,调控亚基2 (NCK5AI蛋白)通过荧光原位杂交定位到人类染色体2q35带。
Cytogenetics and cell genetics Pub Date : 2000-01-01 DOI: 10.1159/000015602
O V Muravenko, R Z Gizatullin, A I Protopopov, V I Kashuba, E R Zabarovsky, A V Zelenin
{"title":"Assignment of CDK5R2 coding for the cyclin-dependent kinase 5, regulatory subunit 2 (NCK5AI protein) to human chromosome band 2q35 by fluorescent in situ hybridization.","authors":"O V Muravenko,&nbsp;R Z Gizatullin,&nbsp;A I Protopopov,&nbsp;V I Kashuba,&nbsp;E R Zabarovsky,&nbsp;A V Zelenin","doi":"10.1159/000015602","DOIUrl":"https://doi.org/10.1159/000015602","url":null,"abstract":"Neuronal CDC2-like kinase (OMIM: 116940) is a heterodimer of CDK5 (OMIM: 123831) and p25 (nck5a), a neuronspecific 25-kDa regulatory subunit derived proteolytically from NCK5A, encoded by CDK5R1 (neuronal CDK5 activator or cyclin-dependent kinase 5 regulatory subunit 1 gene) (Lew et al., 1994; Tsai et al., 1994). By screening a human hippocampus library with a bovine Nck5a cDNA, Tang et al. (1995) isolated cDNAs encoding NCK5AI, a distinct NCK5A isoform. They also referred to the protein as p39 (nck5ai) based on its calculated molecular mass of 39 kDa. This isoform showed a high degree of sequence similarity to p35 (NCK5A) with 57% amino acid identity. A 30-kDa truncated form of p39 (nck5ai) activated both recombinant and native CDK5 in vitro, as does p25 (nck5a). Northern blot analysis of rat tissues indicated that both NCK5A and p39 (nck5ai) are expressed exclusively in brain. In situ hybridization to rat brain sections revealed that p39 (nck5ai) mRNA was highly expressed in the CA1 to CA3 zone of the hippocampal formation, an area highly enriched in neurons. There was no expression in the fimbria hippocampi, where glial cells predominate. Tang et al. (1995) concluded that p39 (nck5ai) shares many common characteristics with NCK5A, including CDK5-activating activity and brainand neuron-specific expression. Both proteins show limited sequence homology to cyclins, suggesting that they define a new family of cyclin-dependent kinase-activating proteins. The gene encoding p39 (nck5ai) was called CDK5R2. Partial sequencing of the NotI linking clone NR3-007 (Zabarovsky et al., 1994) revealed that it is 100% identical to CDK5R2 over 378 bp (aa 110–235). We concluded that NR3-007 contains part of CDK5R2 and mapped this gene using the NR3-007 clone.","PeriodicalId":10982,"journal":{"name":"Cytogenetics and cell genetics","volume":"89 3-4","pages":"160-1"},"PeriodicalIF":0.0,"publicationDate":"2000-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000015602","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21800883","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Characterization and genomic localization of the mouse Extl2 gene. 小鼠Extl2基因的鉴定和基因组定位。
Cytogenetics and cell genetics Pub Date : 2000-01-01 DOI: 10.1159/000015609
W Wuyts, W Van Hul
{"title":"Characterization and genomic localization of the mouse Extl2 gene.","authors":"W Wuyts,&nbsp;W Van Hul","doi":"10.1159/000015609","DOIUrl":"https://doi.org/10.1159/000015609","url":null,"abstract":"<p><p>Human EXTL2 is an alpha1,4-N-acetylhexosaminyltransferase involved in the biosynthesis of heparin/heparan sulfate. We have cloned and characterized the mouse homolog of this gene. Mouse Extl2 encodes a 330 amino acid protein that is 87% identical to its human counterpart. Expression analysis showed that Extl2 is ubiquitously expressed in adult mouse tissues and that the Extl2 transcript is already present in early stages of embryonic development. Determination of the genomic structure revealed that the Extl2 gene spans five exons within a 10-kb region and that the genomic organization between mouse and man is well preserved, with conservation of the number and position of all five exons. By radiation hybrid analysis, Extl2 was mapped to mouse chromosome 3, in a region homologous to the human EXTL2 region on chromosome 1.</p>","PeriodicalId":10982,"journal":{"name":"Cytogenetics and cell genetics","volume":"89 3-4","pages":"185-8"},"PeriodicalIF":0.0,"publicationDate":"2000-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000015609","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21800891","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Genomic structure and chromosome mapping of human and mouse RAMP genes. 人类和小鼠RAMP基因的基因组结构和染色体定位。
Cytogenetics and cell genetics Pub Date : 2000-01-01 DOI: 10.1159/000015644
C Derst, H Engel, K Grzeschik, J Daut
{"title":"Genomic structure and chromosome mapping of human and mouse RAMP genes.","authors":"C Derst,&nbsp;H Engel,&nbsp;K Grzeschik,&nbsp;J Daut","doi":"10.1159/000015644","DOIUrl":"https://doi.org/10.1159/000015644","url":null,"abstract":"<p><p>The cDNAs for human and murine Receptor Activity Modifying Proteins and for the associated murine Calcitonin Receptor Like Receptor were isolated. The human RAMP1 and RAMP3 genes possess two introns and human RAMP2 possesses three introns. Human RAMP1 was assigned to chromosome 2q36-->q37.1, RAMP2 to 17q12-->q21.1 and RAMP3 to 7p13-->p12. Mouse Ramp1 was assigned to chromosome 1 and Ramp2 and Ramp3 were assigned to chromosome 11.</p>","PeriodicalId":10982,"journal":{"name":"Cytogenetics and cell genetics","volume":"90 1-2","pages":"115-8"},"PeriodicalIF":0.0,"publicationDate":"2000-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000015644","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21886950","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 14
The SRY gene HMG-box in micro- and megabats. SRY基因HMG-box在微兆位和兆位。
Cytogenetics and cell genetics Pub Date : 2000-01-01 DOI: 10.1159/000015479
M Bullejos, A Sánchez, M Burgos, R Jiménez, R Díaz De La Guardia
{"title":"The SRY gene HMG-box in micro- and megabats.","authors":"M Bullejos,&nbsp;A Sánchez,&nbsp;M Burgos,&nbsp;R Jiménez,&nbsp;R Díaz De La Guardia","doi":"10.1159/000015479","DOIUrl":"https://doi.org/10.1159/000015479","url":null,"abstract":"<p><p>Sex determination in mammals is controlled by the Y-linked SRY gene, which encodes a transcription factor with a DNA-binding motif of the HMG type. The only conserved region in this gene is the HMG-box, whose nucleotide sequence is currently available in a number of mammalian taxa. However, nothing is known about this gene in bats. Here, we report partial sequences of the SRY HMG-box from four microbat and four megabat species. We used the SRY HMG- box sequences from micro- and megabats to test the phylogenetic relationships between microbats, megabats, and primates. In maximum parsimony and maximum-likelihood trees, mega- and microbat branches start in the same internal node, which is consistent with a monophyletic origin of this mammalian group.</p>","PeriodicalId":10982,"journal":{"name":"Cytogenetics and cell genetics","volume":"88 1-2","pages":"30-4"},"PeriodicalIF":0.0,"publicationDate":"2000-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000015479","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21622639","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 12
Cloning and mapping of murine superoxide dismutase copper chaperone (Ccsd) and mapping of the human ortholog. 小鼠超氧化物歧化酶铜伴侣蛋白(Ccsd)的克隆、定位和人类同源基因定位。
Cytogenetics and cell genetics Pub Date : 2000-01-01 DOI: 10.1159/000015480
S D Moore, M M Chen, D W Cox
{"title":"Cloning and mapping of murine superoxide dismutase copper chaperone (Ccsd) and mapping of the human ortholog.","authors":"S D Moore,&nbsp;M M Chen,&nbsp;D W Cox","doi":"10.1159/000015480","DOIUrl":"https://doi.org/10.1159/000015480","url":null,"abstract":"<p><p>Copper does not exist in a free state within cells but is found consistently bound to metalloproteins. Specific metallochaperones escort copper to numerous targets within the cell, providing protection from the toxic effects of intracellular free copper. Many metallochaperones have been characterized in yeast, mouse, and human. To further characterize mouse metallochaperones, we cloned murine Ccsd from an adult mouse cDNA brain library, including both the coding region and the 5' and 3' UTRs. We obtained a 1,174-bp cDNA with an 825-bp open reading frame, translating a 274 amino acid protein that is 86.9% identical to human CCS. Using a mouse x hamster radiation hybrid panel, we mapped Ccsd to a proximal position on mouse chromosome 19. We mapped human CCS to 11q13 (homologous with mouse chromosome 19), utilizing a human x hamster radiation hybrid panel. The human and mouse metallochaperones are ubiquitously expressed in the major tissues of the body but seem to have different transcription products.</p>","PeriodicalId":10982,"journal":{"name":"Cytogenetics and cell genetics","volume":"88 1-2","pages":"35-7"},"PeriodicalIF":0.0,"publicationDate":"2000-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000015480","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21622640","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
Molecular cloning and characterization of a mouse homolog of human TNFSF14, a member of the TNF superfamily. 人类TNF超家族成员TNFSF14小鼠同源物的分子克隆和表征。
Cytogenetics and cell genetics Pub Date : 2000-01-01 DOI: 10.1159/000015570
K Misawa, T Nosaka, T Kojima, M Hirai, T Kitamura
{"title":"Molecular cloning and characterization of a mouse homolog of human TNFSF14, a member of the TNF superfamily.","authors":"K Misawa,&nbsp;T Nosaka,&nbsp;T Kojima,&nbsp;M Hirai,&nbsp;T Kitamura","doi":"10.1159/000015570","DOIUrl":"https://doi.org/10.1159/000015570","url":null,"abstract":"<p><p>A member of the tumor necrosis factor (TNF) superfamily, human TNFSF14 (hTNFSF14)/HVEM-L (herpes virus entry mediator ligand) was isolated as a cellular ligand for HVEM/TR2 and human lymphotoxin beta receptor (LTbetaR). TNFSF14 induces apoptosis and suppresses tumor formation. We have isolated a cDNA clone for a mouse homologue of hTNFSF14 by signal sequence trap (SST) screening which we recently developed. The deduced amino acid sequence of the mouse TNFSF14 (mTNFSF14) cDNA comprised 239 amino acid residues and was 77% identical to the hTNFSF14 protein. In Northern blot analysis, 2.1 kb and 4.2kb mTNFSF14 transcripts were detected in spleen and lung, and in heart, respectively. Fluorescence in situ hybridization analysis localized the mTNFSF14 gene Tnfsf14 to chromosome 17 which is tightly linked with Tnf, Lta, and Ltb.</p>","PeriodicalId":10982,"journal":{"name":"Cytogenetics and cell genetics","volume":"89 1-2","pages":"89-91"},"PeriodicalIF":0.0,"publicationDate":"2000-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000015570","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21737099","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 15
Assignment of seta to distal mouse X chromosome by radiation hybrid mapping. 用放射杂交作图法确定远端小鼠X染色体的位置。
Cytogenetics and cell genetics Pub Date : 2000-01-01 DOI: 10.1159/000015634
M A Hyatt, V W Sykes, A D Boyer, K C Arden, O Bögler
{"title":"Assignment of seta to distal mouse X chromosome by radiation hybrid mapping.","authors":"M A Hyatt,&nbsp;V W Sykes,&nbsp;A D Boyer,&nbsp;K C Arden,&nbsp;O Bögler","doi":"10.1159/000015634","DOIUrl":"https://doi.org/10.1159/000015634","url":null,"abstract":"The Seta (SH3 containing, expressed in tumorigenic astrocytes) gene, originally isolated from rat, is expressed in association with malignant transformation in astrocytes and in human gliomas (Bögler et al., 2000). It is part of a new family of adapter molecules with three SH3 domains, which includes CD2AP (Dustin et al., 1998) and CMS (Kirsch et al., 1999). These molecules interact with cytoskeletal and cell signaling proteins. In order to identify Seta’s chromosome location we have mapped it in the mouse genome using radiation hybrids.","PeriodicalId":10982,"journal":{"name":"Cytogenetics and cell genetics","volume":"89 3-4","pages":"278"},"PeriodicalIF":0.0,"publicationDate":"2000-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000015634","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21800148","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
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