Clinica Chimica Acta最新文献

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Aptamer biosensors for thrombin 凝血酶色素生物传感器。
IF 3.2 3区 医学
Clinica Chimica Acta Pub Date : 2024-09-24 DOI: 10.1016/j.cca.2024.119976
Zahra Oushyani Roudsari , Hassan Ghasemi , Seyyed Hossein Khatami , Marjan Khorsand , Fereshteh Rahdan , Davood Chehri , Omid Sheydaei , Saleh Aiiashi , Reza Mahmoudi , Ahmad Movahedpour
{"title":"Aptamer biosensors for thrombin","authors":"Zahra Oushyani Roudsari ,&nbsp;Hassan Ghasemi ,&nbsp;Seyyed Hossein Khatami ,&nbsp;Marjan Khorsand ,&nbsp;Fereshteh Rahdan ,&nbsp;Davood Chehri ,&nbsp;Omid Sheydaei ,&nbsp;Saleh Aiiashi ,&nbsp;Reza Mahmoudi ,&nbsp;Ahmad Movahedpour","doi":"10.1016/j.cca.2024.119976","DOIUrl":"10.1016/j.cca.2024.119976","url":null,"abstract":"<div><div>Thrombin, a key factor in the coagulation cascade, is a valuable biomarker of great importance for the prognosis, diagnosis, and monitoring of various diseases, including cancer and heart disease. Due to the increasing attention to the development of point-of-care testing (POCT) options, various types of biosensors have been invented to enhance the accuracy and speed of detection of important biomarkers such as thrombin. Implementation of aptamers in biosensors (aptasensors) improves the target recognition capacity due to the high-affinity binding nature of aptamers. Herein, this review presents recent studies of aptasensors for thrombin detection based on different detection mechanisms encompassing optical biosensors, surface-enhanced Raman spectroscopy (SERS), electrochemical detection, piezoelectric detection, and lateral flow assay.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142342714","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A machine learning-based electronic nose for detecting neonatal sepsis: Analysis of volatile organic compound biomarkers in fecal samples 用于检测新生儿败血症的基于机器学习的电子鼻分析粪便样本中的挥发性有机化合物生物标记物
IF 3.2 3区 医学
Clinica Chimica Acta Pub Date : 2024-09-24 DOI: 10.1016/j.cca.2024.119974
Kombo Othman Kombo , Shidiq Nur Hidayat , Mayumi Puspita , Ahmad Kusumaatmaja , Roto Roto , Hera Nirwati , Rina Susilowati , Ekawaty Lutfia Haksari , Tunjung Wibowo , Setya Wandita , Wahyono , Madarina Julia , Kuwat Triyana
{"title":"A machine learning-based electronic nose for detecting neonatal sepsis: Analysis of volatile organic compound biomarkers in fecal samples","authors":"Kombo Othman Kombo ,&nbsp;Shidiq Nur Hidayat ,&nbsp;Mayumi Puspita ,&nbsp;Ahmad Kusumaatmaja ,&nbsp;Roto Roto ,&nbsp;Hera Nirwati ,&nbsp;Rina Susilowati ,&nbsp;Ekawaty Lutfia Haksari ,&nbsp;Tunjung Wibowo ,&nbsp;Setya Wandita ,&nbsp;Wahyono ,&nbsp;Madarina Julia ,&nbsp;Kuwat Triyana","doi":"10.1016/j.cca.2024.119974","DOIUrl":"10.1016/j.cca.2024.119974","url":null,"abstract":"<div><h3>Background</h3><div>Neonatal sepsis is a global health threat, contributing to high morbidity and mortality rates among newborns. Recognizing the profound impact of neonatal sepsis on long-term health outcomes emphasizes the critical need for timely detection to mitigate its consequences and ensure optimal health for the affected newborns. Currently, various diagnostic approaches have been implemented, but they are limited by their invasiveness, high costs, centralized testing, frequent delays, inaccuracies in results, and the need for sophisticated laboratory equipment.</div></div><div><h3>Methods</h3><div>We introduced a novel, non-invasive, cost-efficient, and easy-to-use technology that can provide rapid results at a point-of-care. The technology utilized a lab-built metal oxide semiconductor-based electronic nose (cNose) combined with volatile organic compound (VOC) biomarkers identified through gas chromatography-mass spectrometry (GC–MS) analysis. The system was evaluated using fecal profiling tests involving a total of 32 samples, including 17 positive and 15 negative sepsis, confirmed by blood culture. To assess the performance in discriminating patients from healthy controls, four machine learning algorithms were implemented.</div></div><div><h3>Results</h3><div>Based on the cross-validation results, the MLPNN model provided the best results in distinguishing between neonates with positive and negative sepsis, achieving high-performance results of 90.63 % accuracy, 88.24 % sensitivity, and 93.33 % specificity at a 95 % confidence interval. Specific VOCs associated with neonatal sepsis, such as alcohols, acids, and esters, were successfully identified through GC–MS analysis, further validating the diagnostic capability of the cNose device.</div></div><div><h3>Conclusion</h3><div>The overall observations show the feasibility of using cNose system as a promising tool for real-time and bedside sepsis detection, potentially improving patient outcomes.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142326723","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Clinical performance and application of novel serum collection “Ser-Col” device in the practice of laboratory diagnosis of infection diseases and several other immunochemical tests 新型血清采集装置 "Ser-Col "在实验室诊断感染疾病和其他几种免疫化学检验中的临床表现和应用。
IF 3.2 3区 医学
Clinica Chimica Acta Pub Date : 2024-09-21 DOI: 10.1016/j.cca.2024.119970
Hayk Harutyunyan , Alvard Hovhannisyan , Hamlet Torosyan , Gohar Hakobjanyan , Ani Grigoryan , Gayane Petrosyan , Mariam Movsisyan , Dennis Poland , Richard Monkel , Joan Lommen , Edouard Tuaillon , Konstantin Yenkoyan
{"title":"Clinical performance and application of novel serum collection “Ser-Col” device in the practice of laboratory diagnosis of infection diseases and several other immunochemical tests","authors":"Hayk Harutyunyan ,&nbsp;Alvard Hovhannisyan ,&nbsp;Hamlet Torosyan ,&nbsp;Gohar Hakobjanyan ,&nbsp;Ani Grigoryan ,&nbsp;Gayane Petrosyan ,&nbsp;Mariam Movsisyan ,&nbsp;Dennis Poland ,&nbsp;Richard Monkel ,&nbsp;Joan Lommen ,&nbsp;Edouard Tuaillon ,&nbsp;Konstantin Yenkoyan","doi":"10.1016/j.cca.2024.119970","DOIUrl":"10.1016/j.cca.2024.119970","url":null,"abstract":"<div><h3>Background</h3><div>Dried blood collection devices might be beneficial for diagnosing infectious diseases in areas far from the medical facilities and in lockdown situations. There are several reports on the efficacy of such applications for qualitative tests. Here we demonstrated the feasibility of a novel Ser-Col blood collection device as a standardized approach for qualitative and quantitative detection of infectious markers and several over immunochemical tests.</div></div><div><h3>Methods</h3><div>In the current study, we included 395 adult participants, 191 men and 204 women, with a median age of 41 years, as well as 75 children with a median age of 3 years. Serological status was determined by testing serum samples for three groups of infection diseases: hepatitis A and C, SARS-CoV-2, and herpes family viruses, as well as for thyroid peroxidase (TPO), prolactin, vitamin B12, and folate. Blood collected on the Ser-Col device (Labonovum) was eluted using an automated system (SCAUT Ser-Col automation, Blok System Supply) and manually. Ser-Col results were compared with serum sampled via standard venipuncture considered as the reference.</div></div><div><h3>Results</h3><div>High correlation coefficients (r = 0.95–0.99) were observed between serum samples collected with Ser-Col and via standard venipuncture for the following tests: anti-HCV, anti-SARS-CoV-2 IgG, anti-HSV-2 IgG, and anti-CMV IgM. Correlation coefficients between Ser-Col and standard venipuncture serum for anti-HSV-1 IgG, anti-CMV IgG, and anti-EBV tests were relatively low (r = 0.73–0.77). Correlation coefficients for anti-TPO, prolactin, vitamin B12, and folate were also characterized with high values (r = 0.97–0.99).</div></div><div><h3>Conclusions</h3><div>High accuracy and quantitative correlation were demonstrated between Ser-Col and samples collected by standard venipuncture. Hence, the Ser-Col blood collection device should be considered as a promising alternative for blood collection, storage, and transportation in both adult and pediatric populations.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142307236","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Diagnostic value of six plasma biomarkers in progressive supranuclear palsy, multiple system atrophy, and Parkinson’s disease 六种血浆生物标记物对进行性核上性麻痹、多系统萎缩和帕金森病的诊断价值。
IF 3.2 3区 医学
Clinica Chimica Acta Pub Date : 2024-09-21 DOI: 10.1016/j.cca.2024.119975
Ying Chen, Jieming Huang, Yiming Li, Xiaochun Chen, Qinyong Ye
{"title":"Diagnostic value of six plasma biomarkers in progressive supranuclear palsy, multiple system atrophy, and Parkinson’s disease","authors":"Ying Chen,&nbsp;Jieming Huang,&nbsp;Yiming Li,&nbsp;Xiaochun Chen,&nbsp;Qinyong Ye","doi":"10.1016/j.cca.2024.119975","DOIUrl":"10.1016/j.cca.2024.119975","url":null,"abstract":"<div><h3>Objectives</h3><div>This study aimed to evaluate the diagnostic ability of six plasma biomarkers in progressive supranuclear palsy (PSP), multiple system atrophy (MSA), and different subtypes of Parkinson’s disease (PD).</div></div><div><h3>Methods</h3><div>Neurofilament light chain (NfL), phosphorylated tau-181, glial fibrillary acidic protein (GFAP), amyloid-β 42 (Aβ42), and amyloid-β 40 (Aβ40) levels were measured using the single-molecule array (Simoa) technique in a cohort of patients with PSP, MSA, different subtypes of PD, and healthy controls (HCs).</div></div><div><h3>Results</h3><div>Plasma NfL and GFAP levels were beneficial in discriminating between the disease groups and HCs. Plasma NfL, Aβ42, and Aβ40 could distinguish atypical Parkinsonian syndrome (APS) from PD and its subtypes. GFAP could discriminate APS from tremor dominant PD but could not discriminate APS from postural instability and gait disorder dominant PD. The efficacy of differentiation improved when a combination of multiple plasma biomarkers was applied.</div></div><div><h3>Conclusions</h3><div>In this study, the plasma biomarkers NfL, GFAP, Aβ42, and Aβ40 exhibited high discriminatory diagnostic value in PD and APS, and could be used as clinically potential diagnostic biomarkers. Plasma biomarker combinations could improve the differential diagnostic efficacy in the comparisons of PD and APS.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0009898124022289/pdfft?md5=edd9901c4afaac511ec4938a116c7ab5&pid=1-s2.0-S0009898124022289-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142281236","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correlation of APOE polymorphism, expression, and plasma levels with cardiac comorbidities among lipodystrophy in HIV-infected patients APOE多态性、表达和血浆水平与艾滋病病毒感染者脂肪营养不良的心脏并发症的相关性。
IF 3.2 3区 医学
Clinica Chimica Acta Pub Date : 2024-09-21 DOI: 10.1016/j.cca.2024.119969
Shyamveer , A. Antony Jenitha , Meenakshi Bhattacharya , Supriya D. Mahajan , Nemat Ali , Mohammad Rashid Khan , HariOm Singh
{"title":"Correlation of APOE polymorphism, expression, and plasma levels with cardiac comorbidities among lipodystrophy in HIV-infected patients","authors":"Shyamveer ,&nbsp;A. Antony Jenitha ,&nbsp;Meenakshi Bhattacharya ,&nbsp;Supriya D. Mahajan ,&nbsp;Nemat Ali ,&nbsp;Mohammad Rashid Khan ,&nbsp;HariOm Singh","doi":"10.1016/j.cca.2024.119969","DOIUrl":"10.1016/j.cca.2024.119969","url":null,"abstract":"<div><div>Lipodystrophy in HIV-infected patients (LDHIV) includes morphological and metabolic abnormalities, including lipid and glucose metabolism. ApoE plays a role in the transport and clearance of lipoprotein. In the general population, ApoE 112 (rs429358) and 158 (rs7412) polymorphisms were linked to severe dyslipidemia. Therefore, we investigated ApoE polymorphism using PCR-RFLP in 200 HIV patients (100 with HIV-associated lipodystrophy (HIVLD), 100 without HIVLD), as well as 100 healthy controls. We also assessed <em>ApoE</em> expression using qRT-PCR and measured its level using ELISA. The <em>APOE</em> 4/4, 3/4, and 2/4 genotypes have been associated with a decreased risk of HIV-1 infection. (P = 0.0001, OR = 0.18; P = 0.006, OR = 0.87; P = 0.006, OR = 0.09) when compared between HIV-positive individuals and healthy controls. Conversely, APOE allele 2 was linked to a higher risk of acquiring HIV-1 (P = 0.03, OR = 3.02). APOE allele 2 was linked to a higher likelihood of HIVLD severity when compared between patients with and without HIVLD (P = 0.05, OR = 2.82). When comparing patients with HIVLD to healthy controls, the <em>APOE</em> 4/4 and 2/4 genotypes as well as allele 4 were linked with the reduced risk of LDHIV (P = 0.0006, OR = 0.21; P = 0.01, OR = 0.18; P = 0.0002, OR = 0.40). When compared to patients without HIVLD from healthy controls, the <em>ApoE</em> 4/4 genotype, 2 and 4 alleles, were linked to a reduced risk of developing HIVLD (P = 0.0009, OR = 0.14; P = 0.0001, OR = 0.17; P = 0.00001, OR = 0.39). When comparing impaired to normal cholesterol levels in patients without HIVLD, the <em>ApoE</em> 3/4 genotype was linked with the increased risk of impaired cholesterol levels (P = 0.02, OR = 3.37). When comparing impaired and normal glucose levels in patients without HIVLD, the <em>ApoE</em> 4/4 genotype was associated to an elevated risk of impaired glucose levels (P = 0.03, OR = 8.27). In multivariate analysis, independent impaired cholesterol, LDL, and glucose levels were associated with a higher risk of lipodystrophy severity (P = 0.04, OR = 2.33; P = 0.001, OR = 4.05; P = 0.05, OR = 2.63). <em>ApoE</em> expression was up-regulated in LDHIV with a fold change value of 4.02 compared to those without HIVLD. <em>ApoE</em> protein level was found to be higher in patients of the HIVLD group (3.01 mg/dL) compared to those without HIVLD group (2.83 mg/dL). In conclusion, individuals with <em>ApoE</em> allele 2 were at higher risk for HIV-1 acquisition and severity of HIVLD, whereas those with <em>ApoE</em> allele 4 were at reduced HIVLD severity and development risk. It’s possible that <em>ApoE</em>’s increased level and its overexpression are related to the <em>ApoE</em> allele 2 in HIVLD patients. The development of LDHIV may be facilitated by the <em>APOE</em> 3/4 and 4/4 genotypes as well as abnormal glucose and cholesterol levels.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142307237","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Defining age-specific reference intervals for biomarkers distinguishing bacterial from viral infection in paediatrics 确定儿科细菌和病毒感染生物标志物的特定年龄参考区间。
IF 3.2 3区 医学
Clinica Chimica Acta Pub Date : 2024-09-21 DOI: 10.1016/j.cca.2024.119972
Clare Mills, Damaris Condy, Beth Cartmill, Holly Drummond, Cathal Roarty, Tom Waterfield
{"title":"Defining age-specific reference intervals for biomarkers distinguishing bacterial from viral infection in paediatrics","authors":"Clare Mills,&nbsp;Damaris Condy,&nbsp;Beth Cartmill,&nbsp;Holly Drummond,&nbsp;Cathal Roarty,&nbsp;Tom Waterfield","doi":"10.1016/j.cca.2024.119972","DOIUrl":"10.1016/j.cca.2024.119972","url":null,"abstract":"<div><div>Differentiating bacterial from viral infections in children is a common clinical challenge. Novel host immune biomarkers have the potential to aid thediagnosis of infection aetiology and identify children who require antibiotics. Data on novel infection biomarkers gender and age-specific correlations, and reference intervals in healthy paediatrics is lacking. This study reports the plasma levels of three novel biomarkers that can aid in the differentiation of bacterial and viral infection in a healthy group of paediatrics. The levels of (Interferon-Gamma Inducible Protein 10 kDa (IP-10), Lipocalin-2 (LCN2) and TNF-Related Apoptosis-Inducing Ligand (TRAIL) were quantified in 199 plasma samples from healthy paediatrics aged 2 to 16 years old from across the UK. Reference intervals (2.5th and 97.5th) were determined, and biomarker levels were examined for sex and age associations. Reference intervals for IP-10, LCN2 and TRAIL for ages 2–16 years were 36.7–168.1 pg/ml, 14.2–123.3 ng/ml, 57.4–71.4 pg/ml respectively. No biomarker showed an association with sex and IP-10 did not show any association with age. TRAIL levels had a weak continuous negative correlation with age and LCN2 levels had a continuous positive correlation with age. Specific cut-offs for LCN2 in two age categories were identified, while TRAIL did not require age partitions. This study provides age-appropriate reference intervals for three biomarkers of infection in healthy children. These findings have the potential to improve the impact of future research on these biomarkers, the accuracy of clinical decision-making in children with infection, paediatric patient care and outcomes, and antimicrobial stewardship.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142307238","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A retrospective analysis of 1600 infertility patients with azoospermia and severe oligozoospermia 对1600名无精子症和严重少精子症不育患者的回顾性分析。
IF 3.2 3区 医学
Clinica Chimica Acta Pub Date : 2024-09-20 DOI: 10.1016/j.cca.2024.119973
Bing Yi Zhou , Wen Ting Fu , Heng Gu , Ming Zhen Li , Xiao Bin Zhong , Jia Tang
{"title":"A retrospective analysis of 1600 infertility patients with azoospermia and severe oligozoospermia","authors":"Bing Yi Zhou ,&nbsp;Wen Ting Fu ,&nbsp;Heng Gu ,&nbsp;Ming Zhen Li ,&nbsp;Xiao Bin Zhong ,&nbsp;Jia Tang","doi":"10.1016/j.cca.2024.119973","DOIUrl":"10.1016/j.cca.2024.119973","url":null,"abstract":"<div><h3>Objective</h3><div>This study aimed to investigate the genetic etiology of male infertility patients.</div></div><div><h3>Method</h3><div>A total of 1600 male patients with infertility, including 1300 cases of azoospermia and 300 cases of severe oligozoospermia, underwent routine semen analysis, chromosomal karyotype analysis and sex hormone level testing. The Azoospermia factor (AZF) on the Y chromosome was detected using the multiple fluorescence quantitative PCR technique. Additionally, copy number variation (CNV) analysis was performed on patients with Sertoli-cell-only syndrome who had a normal karyotype and AZF.</div></div><div><h3>Result</h3><div>Chromosomal abnormalities were found in 334 cases (20.88 %) of the 1600 male infertility patients. The most common type of abnormality was sex chromosome abnormalities (18.94 %), with 47, XXY being the most frequent abnormal karyotype. The rates of chromosomal abnormalities were significantly different between the azoospermia group and the severe oligospermia group (23.69 % and 8.67 %, respectively; <em>P</em>&lt;0.05). AZF microdeletions were detected in 155 cases (9.69 %), with various deletion types and AZFc region microdeletion being the most prevalent. The rates of AZF microdeletions were not significantly different between the azoospermia group and the severe oligospermia group (9.15 % and 12 %, respectively; <em>P</em>=0.133). In 92 patients with Sertoli-cell-only syndrome who had a normal karyotype and AZF, the detection rate of CNV was 16.3 %. Compared to the severe oligospermia group, the azoospermia group had higher levels of FSH and LH and lower levels of T and E2, and the differences were statistically significant (<em>P</em>&lt;0.05).</div></div><div><h3>Conclusions</h3><div>Male infertility is a complex multifactorial disease, with chromosomal abnormalities and Y chromosome microdeletions being important genetic factors leading to the disease. Initial genetic testing of infertile men should include karyotyping and Y chromosome microdeletions. If necessary, CNV testing should be performed to establish a clinical diagnosis and provide individualized treatment for male infertility.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-09-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142281234","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A stable thymidine kinase 1 tetramer for improved quality control of serum level quantification 用于改进血清水平定量质量控制的稳定胸苷激酶 1 四聚体。
IF 3.2 3区 医学
Clinica Chimica Acta Pub Date : 2024-09-19 DOI: 10.1016/j.cca.2024.119967
Xiangning Feng , Jinsong Zhang , Jinsong Liu , Jiayue Su , Xinrui Liu , Mingwei Yang , Yuanli Peng , Haozhen Yan , Zeliang Chen
{"title":"A stable thymidine kinase 1 tetramer for improved quality control of serum level quantification","authors":"Xiangning Feng ,&nbsp;Jinsong Zhang ,&nbsp;Jinsong Liu ,&nbsp;Jiayue Su ,&nbsp;Xinrui Liu ,&nbsp;Mingwei Yang ,&nbsp;Yuanli Peng ,&nbsp;Haozhen Yan ,&nbsp;Zeliang Chen","doi":"10.1016/j.cca.2024.119967","DOIUrl":"10.1016/j.cca.2024.119967","url":null,"abstract":"<div><div>DNA synthesis is a critical process for cell growth and division. In cancer patients, an enzyme called thymidine kinase 1 (TK1) is often elevated in the blood, making it a valuable biomarker for cancer diagnosis and treatment. However, previous studies have shown that recombinant TK1 can exist in unstable mixtures of tetramers and dimers, leading to inconsistent results and potentially affecting accuracy. To address this issue, we hypothesized that incorporating tetrameric coiled-coil peptides could enhance TK1 self-assembly into stable tetramers without requiring additional adenosine triphosphate. In this study, we successfully expressed a recombinant TK1 tetramer protein in the <em>Escherichia coli</em> system. We optimized the induction conditions, significantly increasing protein expression levels, functionality, and solubility. Size exclusion chromatography confirmed the formation of a tetrameric structure in the expressed TK1 protein, with a molecular weight of 127.2 KDa, consistent with our expectations. We also found that the TK1 tetramer exhibited higher affinity with anti-TK1 IgY than wild-type TK1, as shown by enzyme-linked immunosorbent assay experiments. Moreover, the TK1 tetramer demonstrated good stability against heating, freeze-thawing and lyophilization with almost no immunoactivity lost. These findings suggest that recombinant TK1 tetramers have the potential to serve as calibrators in diagnostic assay kits, becoming promising candidates for quality control of clinical laboratory and in vitro diagnostic reagents.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142281235","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Intra- and inter-day variations in oral metabolites from mouth-rinsed water determined using capillary electrophoresis–mass spectrometry metabolomics 利用毛细管电泳-质谱代谢组学测定漱口水中口腔代谢物的日内和日间变化。
IF 3.2 3区 医学
Clinica Chimica Acta Pub Date : 2024-09-14 DOI: 10.1016/j.cca.2024.119965
Yuki Maruyama , Narumi Fujii , Ryosuke Kawamata , Kaoru Yamada , Yuko Ichiba , Yasushi Kakizawa , Masahiro Sugimoto , Akiyoshi Hirayama
{"title":"Intra- and inter-day variations in oral metabolites from mouth-rinsed water determined using capillary electrophoresis–mass spectrometry metabolomics","authors":"Yuki Maruyama ,&nbsp;Narumi Fujii ,&nbsp;Ryosuke Kawamata ,&nbsp;Kaoru Yamada ,&nbsp;Yuko Ichiba ,&nbsp;Yasushi Kakizawa ,&nbsp;Masahiro Sugimoto ,&nbsp;Akiyoshi Hirayama","doi":"10.1016/j.cca.2024.119965","DOIUrl":"10.1016/j.cca.2024.119965","url":null,"abstract":"<div><h3>Background and aims</h3><div>Collecting clinical samples without inconveniencing participants is desirable. The profile of metabolites in mouth-rinsed water is similar to that in saliva. However, the intra- and inter-day variations in unstimulated or stimulated saliva metabolites from mouth-rinsed water have yet to be clarified. Thus, we aimed to fill this research gap using capillary electrophoresis–mass spectrometry metabolomics.</div></div><div><h3>Materials and methods</h3><div>We collected mouth-rinsed water from 15 healthy participants at 9:00, 11:30, 14:00, and 16:30 daily for 3 days. In total, 509 metabolite concentrations from 180 samples were obtained using capillary electrophoresis time-of-flight mass spectrometry. Variations in each metabolite were evaluated using the Wilcoxon signed-rank test to determine at which time/day significant differences occurred after removing metabolites without significant changes using the Friedman test.</div></div><div><h3>Results</h3><div>Of 167 frequently detected metabolites, 100 exhibited intra-day variations, and none exhibited inter-day variations. Intra-day variations were classified into four patterns, and the intra-day variation in each metabolite was assessed. The variations may reflect elapsed time after meals, oral cleaning, or circadian rhythms.</div></div><div><h3>Conclusion</h3><div>This study could serve as a reference for improving the design of future clinical trials and the accuracy of metabolome analysis of mouth-rinsed water samples collected at different dates and times.</div></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0009898124022186/pdfft?md5=4349bebdf14f5a1da23e047d64a54eef&pid=1-s2.0-S0009898124022186-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142281237","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Detection of egg white allergy in children by specific IgE microarray chemiluminescence immunoassay 用特异性 IgE 微阵列化学发光免疫测定法检测儿童蛋清过敏症
IF 3.2 3区 医学
Clinica Chimica Acta Pub Date : 2024-09-13 DOI: 10.1016/j.cca.2024.119966
Ren-Wei-Yang Zhang , Dan-Dan Yuan , Xue Yang , Yong-Bing Yang , Fa-Ping Li , Xu-Yang Chen , Kai Wang , Jie Liu , Li-Na Yu , Zhi-Gang Hu
{"title":"Detection of egg white allergy in children by specific IgE microarray chemiluminescence immunoassay","authors":"Ren-Wei-Yang Zhang ,&nbsp;Dan-Dan Yuan ,&nbsp;Xue Yang ,&nbsp;Yong-Bing Yang ,&nbsp;Fa-Ping Li ,&nbsp;Xu-Yang Chen ,&nbsp;Kai Wang ,&nbsp;Jie Liu ,&nbsp;Li-Na Yu ,&nbsp;Zhi-Gang Hu","doi":"10.1016/j.cca.2024.119966","DOIUrl":"10.1016/j.cca.2024.119966","url":null,"abstract":"<div><h3>Background</h3><p>Allergen testing has emerged as a pivotal component in prevention and treatment strategies for allergic diseases among children and the utilization of specific IgE (sIgE) through a fully automated chemiluminescent microarray immunoassay (CLMIA) has emerged as a promising trend in the simultaneous detection of multiple allergenic components of children.</p></div><div><h3>Methods</h3><p>The accuracy and reliability of CLMIA were verified using children’s serum samples that concentrated on allergens. the allergens. The clinical diagnostic practicability of CLMIA was assessed through comprehensive evaluations including measurements of the limit of detection (LOD), intra-batch, and inter-batch precision, linearity analysis, the cross-contamination rate, and the concordance rate with the Phadia system.</p></div><div><h3>Results</h3><p>After the optimization process of CLMIA, the LODs for allergens were calculated to be below 0.01 kU/L, demonstrating the high sensitivity of CLMIA. All components exhibited good linearity within the range of 0.1–100.0 kU/L and the coefficient of determinations (R<sup>2</sup> &gt; 0.99). The data of intra-batch precision (&lt;10 %) and inter-batch data (&lt;15 %) illustrated the high reproducibility of CLMIA. The cross-contamination rates for allergens (&lt;0.5 %) showed the high accuracy of CLMIA without interfering. The positive concordance rate between CLMIA and the Phadia system exceeds 90 % with a good negative concordance rate (&gt;85 %) and the Kappa coefficients (&gt;0.8), suggesting the close alignment of CLMIA and the Phadia system and showing the satisfactory clinical potential of CLMIA in children’s allergy disease.</p></div><div><h3>Conclusions</h3><p>The application of CLMIA has been promising in allergen testing, especially for detecting multiple allergenic components in children.</p></div>","PeriodicalId":10205,"journal":{"name":"Clinica Chimica Acta","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142239489","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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