Rahul D. Jawarkar , Anam Khan , Suraj N. Mali , Prashant K. Deshmukh , Rahul G. Ingle , Sami A Al-Hussain , Aamal A. Al-Mutairi , Magdi E.A. Zaki
{"title":"Cheminformatics-driven prediction of BACE-1 inhibitors: Affinity and molecular mechanism exploration","authors":"Rahul D. Jawarkar , Anam Khan , Suraj N. Mali , Prashant K. Deshmukh , Rahul G. Ingle , Sami A Al-Hussain , Aamal A. Al-Mutairi , Magdi E.A. Zaki","doi":"10.1016/j.chphi.2024.100754","DOIUrl":"10.1016/j.chphi.2024.100754","url":null,"abstract":"<div><div>The β-secretase, sometimes referred to as BACE1 or Asp2, is the enzyme responsible for initiating the production of Aβ by breaking down the amyloid precursor protein. Hence, BACE is a pivotal target for pharmacological intervention aimed at diminishing the production of Aβ in Alzheimer's disease (AD). We did a quantitative structure-activity relationship (QSAR) study on 1235 compounds that had been experimentally reported as BACE-1 inhibitors (Ki) to find the target molecule and structural patterns linked to blocking the BACE-1 receptor. The OECD-recommended genetic algorithm-multiple linear regression (GA-MLR) QSAR model strikes a good balance between being able to make accurate predictions and understanding how things work. It achieves high values for many evaluation metrics, including R2tr = 0.8047, Q<sup>2</sup>LMO = 0.802, R<sup>2</sup>ex = 0.805, CCCex = 0.891, Q<sup>2</sup>-F1=0.801, Q<sup>2</sup>-F2=0.799, and Q<sup>2</sup>-F3=0.815. The mechanistic interpretation of QSAR has identified some nitrogen atoms that are required to block beta-secretase and make it less effective at doing its job. A positively charged aromatic carbon atom has a more significant impact on beta-secretase-1 inhibition. The docking study showed that the catalytic dye residues Asp32 and Asp228 become protonated when compound 27 is present, but they stay unprotonated when compound 27 is not present. These rings of pyrazine and pyridine interact hydrophobically with Tyr71 and Ile118 residues, confirming the pharmacophoric features seen in the QSAR data. We examined the stability of both the protein-ligand complex and the apo-protein. The apoprotein had an average gyration radius of 22.13, whereas the protein-ligand complex had an average gyration radius of 22.91. No changes were made to the results from the molecular docking, molecular dynamics (MD) simulation, MMGBSA (Molecular Mechanics Generalized Born Surface Area), or DFT analyses. Therefore, the current work could effectively contribute to the future development of BACE inhibitors in medication design.</div></div>","PeriodicalId":9758,"journal":{"name":"Chemical Physics Impact","volume":null,"pages":null},"PeriodicalIF":3.8,"publicationDate":"2024-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142419284","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Elias Ghaleh Golab , Reza Ghamarpoor , Fereshteh Jafari Kondori , Seyednooroldin Hosseini , Hasan N. Al-Saedi
{"title":"Synthesis of hydrophobic polymeric surfactant (Polyacrylamide/Zwitterionic) and its effect on enhanced oil recovery (EOR)","authors":"Elias Ghaleh Golab , Reza Ghamarpoor , Fereshteh Jafari Kondori , Seyednooroldin Hosseini , Hasan N. Al-Saedi","doi":"10.1016/j.chphi.2024.100756","DOIUrl":"10.1016/j.chphi.2024.100756","url":null,"abstract":"<div><div>Injection of surfactant and polymer at the same time is one of the challenges that reduce their performance in reservoirs. Using a polymeric surfactant (PS) as a single new material can be the best alternative to solve the existing challenges. Considering the basic problems of chemical injection, this work focuses on the surface adsorption of polymer/surfactant on carbonate reservoirs (CRs). In this work, polyacrylamide was synthesized using zwitterionic as a hydrophobic polymeric surfactant (i.e. HZPAA). For a better comparison, this substance was compared with hydrolyzed polyacrylamide (HPAA) in concentrations of 40 to 1000 mg in CRs. Examining the results states that with increasing polymer concentration, the surface absorption of HZPAA and HPAA on dolomite reservoir rocks (DRRs) with positive surface charge increases. The attendance of COO and SO<sup>3−</sup> functional groups in the matrix of the new polymer (i.e. HZPAA) creates electrostatic forces and superior surface absorption. Their mechanism works in such a way that negative functional groups attract positively charged surfaces and increase the surface absorption of the polymer. Investigations show that the new synthesized material (i.e. HZPAA) can provide a new approach to improving surface absorption in carbonate reservoirs.</div></div>","PeriodicalId":9758,"journal":{"name":"Chemical Physics Impact","volume":null,"pages":null},"PeriodicalIF":3.8,"publicationDate":"2024-10-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142419282","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Cetuximab functionalized chitosan/hyaluronic acid-based nanoparticles loaded with cabazitaxel enhances anti-tumor efficacy in DMBA-induced breast cancer model in rats through spatial targeting","authors":"Abhishek Jha , Pooja Goswami , Manish Kumar , Kanchan Bharti , Manjit Manjit , Amol P. Satpute , Ashutosh Gupta , Sudheer Moorkoth , Biplob Koch , Brahmeshwar Mishra","doi":"10.1016/j.chphi.2024.100750","DOIUrl":"10.1016/j.chphi.2024.100750","url":null,"abstract":"<div><div>The article discusses the ionic gelation of cationic chitosan (CS) with anionic hyaluronic acid (HA) sodium salt to form nanoparticles in the range of 125 nm. The particles were further functionalized with cetuximab to endow it with the ability to spatially target the tumor over-expressing EGFR. Solid-state characterization of the particles using XRD, FTIR, and DSC revealed the formation of stable nanoparticles with Cabazitaxel loaded in the amorphous nanostructure. XPS study used to assess the surface characteristics indicated that the cetuximab was successfully anchored on the surface of the particle. The prepared CS-HA-Cmab-NP elicited a pH-responsive drug release behavior due to the presence of CS in the matrix. In vitro performance of the nanoparticles was evaluated on MDA-MB-231 breast cancer cell lines showed overall increase in efficacy. In vivo pharmacokinetic and anti-tumor effect evaluated in female Sprague Dawley rats indicated that the Cmab-conjugated nanoparticles improved half-life of cabazitaxel and tumor reduction capability with higher survival rate and lower reduction in body weight. The results indicate that CS/HA nanoparticles anchored with cetuximab show enhanced efficacy in reducing the breast cancer tumor in DMBA-induced breast tumor model through spatial targeting, consequently reducing the systemic toxicity.</div></div>","PeriodicalId":9758,"journal":{"name":"Chemical Physics Impact","volume":null,"pages":null},"PeriodicalIF":3.8,"publicationDate":"2024-10-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142419286","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jannatul Ferdous , Faizan Abul Qais , Ferdausi Ali , Debashis Palit , Imtiaj Hasan , Sarkar M.A. Kawsar
{"title":"FTIR, 1H-/13C-NMR spectral characterization, antimicrobial, anticancer, antioxidant, anti-inflammatory, PASS, SAR, and in silico properties of methyl α-D-glucopyranoside derivatives","authors":"Jannatul Ferdous , Faizan Abul Qais , Ferdausi Ali , Debashis Palit , Imtiaj Hasan , Sarkar M.A. Kawsar","doi":"10.1016/j.chphi.2024.100753","DOIUrl":"10.1016/j.chphi.2024.100753","url":null,"abstract":"<div><div>A novel series of biologically active derivatives based on methyl α-D-glucopyranoside (MGP) has been developed, comprising 6-<em>O</em>-monosubstituted MGP derivatives obtained from methyl α-D-glucopyranoside. These derivatives were transformed into 2,3,4-tri-<em>O</em>-acyl MGP derivatives, incorporating diverse functionalities within a single molecular framework, aimed at producing new products for antimicrobial studies. All synthesized compounds were identified through spectral analyses (FTIR, <sup>1</sup>H-NMR, and <sup>13</sup>C-NMR) and elemental analysis. Antimicrobial <em>in vitro</em> testing revealed that these MGP derivatives have notable efficacy against various pathogenic microorganisms, along with the prediction of activity spectra for substances (PASS). Compounds <strong>2</strong> and <strong>7</strong> exhibited the highest inhibitory activity against <em>Bacillus subtilis</em> and <em>Escherichia coli</em>, with minimum inhibitory concentration (MIC) values ranging from 0.25 to 64.0 µg/mL and minimum bactericidal concentration (MBC) values ranging from 8.0 to 128.0 µg/mL. Moreover, these compounds demonstrated significant antioxidant properties compared with those of standard antioxidants according to the results of the DPPH free radical scavenging assay. An evaluation of the growth and proliferation of Ehrlich ascites carcinoma (EAC) cells revealed moderate cell growth inhibition by compounds <strong>5</strong> and <strong>6</strong>, with IC<sub>50</sub> values of 5958.54 and 5437.17 µg/mL, respectively, as determined <em>via</em> an MTT colorimetric assay. An analysis of the structure-activity relationship (SAR) revealed that the combination of the (<em>p</em>-<em>C</em>H<sub>3</sub>.C<sub>6</sub>H<sub>4</sub>CO-) and halo-aromatic [3-Cl.C<sub>6</sub>H<sub>4</sub>CO-] chains with sugar had the highest efficiency in pathogens. Molecular docking studies using AutoDock Vina highlighted compound <strong>7</strong> as a promising inhibitor of the carbapenemase, OmpF, and HmoB proteins, with binding energies of -11.53 kcal/mol, -2.26 kcal/mol, and -30.75 kcal/mol, respectively. A 100-ns molecular dynamics simulation study demonstrated the validity of stable conformation and binding patterns in a stimulating environment. Pharmacokinetic characterization and ADMET predictions indicated favorable drug-like properties. These substantial <em>in vitro</em> and <em>in silico</em> studies demonstrate the importance of additional investigations to confirm the efficacy of MGP derivatives as antimicrobial agents.</div></div>","PeriodicalId":9758,"journal":{"name":"Chemical Physics Impact","volume":null,"pages":null},"PeriodicalIF":3.8,"publicationDate":"2024-10-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142419283","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Visible light-induced continuous process for photodegradation of chlorpyrifos using g-C3N4/GO/La2O3 photocatalyst from agricultural aquatic waste","authors":"Sahima Tabasum , Ajit Sharma , Nandini Dhupar , Upasana Bagri , Souheen Yousuf , Vibha Kumar , Atheesha Singh , Sudheesh K. Shukla","doi":"10.1016/j.chphi.2024.100751","DOIUrl":"10.1016/j.chphi.2024.100751","url":null,"abstract":"<div><div>The widespread use of pesticides and the formation of by-products on the gradual decomposition of these pesticides have led to environmental pollution, which in turn has caused harm to both human and ecosystem health. Pesticides have been found in water bodies worldwide and are a cause of concern. Photocatalytic reactions have received significant attention in the past few decades for the breakdown of pesticides. Different parameters were studied, including the effects of pH, kinetics, dose, and regeneration. The UV–vis spectroscopy results suggest that the g-C<sub>3</sub>N<sub>4</sub>/GO/La<sub>2</sub>O<sub>3</sub> nanocomposite is a superior reusable photocatalyst for the degradation of chlorpyrifos (CPF) compared to pure g-C<sub>3</sub>N<sub>4</sub> and GO/ g-C<sub>3</sub>N<sub>4</sub>. This is demonstrated by the fact that the g-C<sub>3</sub>N<sub>4</sub>/GO/La<sub>2</sub>O<sub>3</sub> nanocomposite outperforms both of these materials. The increased photocatalytic performance may be attributed to a balance between the band gap, morphology, crystalline quality, and surface area, all of which may be slowing down the electron-hole recombination rates. This may be due to the enhanced photocatalytic performance. In addition, the feasible processes were outlined from radical quenching studies, and the results clearly indicate that the presence of more OH radicals plays an essential role in the process of efficient photodegradation using novel g-C<sub>3</sub>N<sub>4</sub>/GO/La<sub>2</sub>O<sub>3</sub> nanocomposites.</div></div>","PeriodicalId":9758,"journal":{"name":"Chemical Physics Impact","volume":null,"pages":null},"PeriodicalIF":3.8,"publicationDate":"2024-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142419287","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Synthesis and investigation of the optical characteristics of RE3+ activated Ca2Li2Si2O7 (Rare earth = Eu, Tb) phosphor for W-LED application","authors":"Pragati Tale , Ashok Mistry , Bharti Bawanthade , Ashish Mathur , S.J. Dhoble","doi":"10.1016/j.chphi.2024.100752","DOIUrl":"10.1016/j.chphi.2024.100752","url":null,"abstract":"<div><div>Novel Eu<sup>3+</sup> and Tb<sup>3+</sup> ions-doped Ca<sub>2</sub>Li<sub>2</sub>Si<sub>2</sub>O<sub>7</sub> luminescent materials were prepared by a low-temperature solid-state reaction technique for LED application. The electronic transitions of <sup>5</sup>D<sub>0</sub> → <sup>7</sup>F<sub>2</sub> (Eu<sup>3+</sup>) and <sup>5</sup>D<sub>4</sub> → <sup>7</sup>F<sub>5</sub> (Tb<sup>3+</sup>) have caused the luminescent material to exhibit strong luminosity in 613 nm (red) and 545 nm (green), respectively. Fourier transform infrared (FT-IR) spectra were applied for the identification of functional groups, and powder X-ray diffraction (XRD) was used for structural analysis. Morphological data was gathered using scanning electron microscopy (SEM). Its color was also determined by calculating the CIE coordinates. The excitation, PL properties, and luminescence decay time of the emission transitions of Eu<sup>3+</sup> (<sup>5</sup>D<sub>0</sub> → <sup>7</sup>F<sub>2</sub>) and Tb<sup>3+</sup> (<sup>5</sup>D<sub>4</sub> → <sup>7</sup>F<sub>5</sub>) were measured in order to analyze luminosity spectra.</div></div>","PeriodicalId":9758,"journal":{"name":"Chemical Physics Impact","volume":null,"pages":null},"PeriodicalIF":3.8,"publicationDate":"2024-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142419281","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Redi Kristian Pingak , Amine Harbi , Soukaina Bouhmaidi , Albert Z. Johannes , Nikodemus U.J. Hauwali , Wahidullah Khan , Fidelis Nitti , David Tambaru , M. Moutaabbid , Larbi Setti
{"title":"Novel Tl2GeX6 (X=Cl,Br) double perovskites for solar cell, optoelectronic, and thermoelectric applications: A DFT investigation","authors":"Redi Kristian Pingak , Amine Harbi , Soukaina Bouhmaidi , Albert Z. Johannes , Nikodemus U.J. Hauwali , Wahidullah Khan , Fidelis Nitti , David Tambaru , M. Moutaabbid , Larbi Setti","doi":"10.1016/j.chphi.2024.100749","DOIUrl":"10.1016/j.chphi.2024.100749","url":null,"abstract":"<div><div>This study aims to investigate the structural, mechanical, optical, electronic, and thermoelectric properties of novel double perovskites Tl<sub>2</sub>GeCl<sub>6</sub> and Tl<sub>2</sub>GeBr<sub>6</sub>. The Quantum Espresso code was employed to perform the Density Functional Theory (DFT) calculation on the perovskites’ characteristics. The results indicated that both materials exhibit chemical and structural stability, with equilibrium lattice constants of 10.08 Å and 10.55 Å for Tl<sub>2</sub>GeCl<sub>6</sub> and Tl<sub>2</sub>GeBr<sub>6</sub>, respectively. The calculated elastic parameters and elastic moduli data also demonstrated that the new double perovskites exhibit mechanical stability while the calculated electronic band structure and the density of states using the PBE functional indicated that the materials are semiconductors with energy gap values of 0.3 eV for Tl<sub>2</sub>GeBr<sub>6</sub> and 1.72 eV for Tl<sub>2</sub>GeCl<sub>6</sub>, respectively. Using more accurate SCAN approximation, the energy gaps were refined to 0.53 eV for Tl<sub>2</sub>GeBr<sub>6</sub> and 2.10 eV for Tl<sub>2</sub>GeCl<sub>6</sub>. Additionally, the calculated dielectric functions, extinction coefficient and absorption coefficients of Tl<sub>2</sub>GeCl<sub>6</sub> and Tl<sub>2</sub>GeBr<sub>6</sub> strongly suggest the exceptional optical response of these materials. Notably, Tl<sub>2</sub>GeBr<sub>6</sub> is estimated to have a particularly strong visible-light absorption capacity, positioning it as a promising absorber for perovskite solar cells. These findings are also supported by the low reflectivity values observed. Finally, the analysis of their thermoelectric properties revealed the excellent thermoelectric properties of Tl<sub>2</sub>GeCl<sub>6</sub> and Tl<sub>2</sub>GeBr<sub>6</sub>, as indicated by their high figures of merit, predicted to be 0.73 and 0.68 for the respective perovskites.</div></div>","PeriodicalId":9758,"journal":{"name":"Chemical Physics Impact","volume":null,"pages":null},"PeriodicalIF":3.8,"publicationDate":"2024-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142359007","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Swati Gajbhiye , Yatish R. Parauha , Naumov G. Nikolay , S.J. Dhoble
{"title":"Structural and luminescence properties of Y2O3:Ho3+ phosphor: Potential applications in plant cultivation LEDs and thermoluminescent dosimetry","authors":"Swati Gajbhiye , Yatish R. Parauha , Naumov G. Nikolay , S.J. Dhoble","doi":"10.1016/j.chphi.2024.100746","DOIUrl":"10.1016/j.chphi.2024.100746","url":null,"abstract":"<div><div>Current research on Y<sub>2</sub>O<sub>3</sub>:Ho<sup>3+</sup> phosphors highlight their promising luminescence properties, but often lacks an environmentally friendly synthesis method and comprehensive analysis of their applications. In this study, we address these gaps by successfully synthesizing Y<sub>2</sub>O<sub>3</sub>:Ho<sup>3+</sup> phosphors using a green synthesis route with varying concentrations of Ho<sup>3+</sup>. Our work provides detailed characterization of their photoluminescence (PL) and thermoluminescent (TL) properties. The PL excitation (PLE) spectra reveal a distinct peak at 439 nm, attributed to the <sup>5</sup>I<sub>8</sub>→(<sup>5</sup>K<sub>5</sub>; <sup>5</sup>G<sub>5</sub>) transition of Ho<sup>3+</sup>ions. Upon excitation at 439 nm, the emission spectra show a sharp emission peak around 660 nm from the <sup>5</sup>F<sub>5</sub>→<sup>5</sup>I<sub>8</sub> transition, with the 0.1 mol% Ho<sup>3+</sup> phosphors exhibiting particularly strong red emission, indicating their suitability for indoor plant cultivation under LED lighting. Additionally, TL properties were evaluated after gamma-ray exposure, with the highest emission intensity at 0.1 mol% Ho<sup>3+</sup> concentration. TL glow curves were analyzed for various radiation doses using the Computerized Glow Curve Deconvolution (CGCD) method, and TL trapping parameters were determined through Chen's peak shape and the Initial Rise methods. This work demonstrates significant potential for using these phosphors to enhance indoor plant growth and for applications in thermoluminescent dosimetry (TLD).</div></div>","PeriodicalId":9758,"journal":{"name":"Chemical Physics Impact","volume":null,"pages":null},"PeriodicalIF":3.8,"publicationDate":"2024-09-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142419280","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Transport and Kinetic Property of the Butyric Acid in Water: A Simulation Study","authors":"Priya Dey , Vishal Singh , Hemant Kumar","doi":"10.1016/j.chphi.2024.100744","DOIUrl":"10.1016/j.chphi.2024.100744","url":null,"abstract":"<div><div>Microbiota is defined as a class of all microorganisms which includes fungi, protozoa, bacteria and viruses. About 90 % of all microbiota in our body are found in our gut that regulates host immunity. The gut-brain axis is a bidirectional communication system that allows gut microbiota to communicate with the brain and <em>vice versa</em>. Studies suggest that the gut dysbiosis may enhance neurotoxic substances such as short-chain fatty-acids (SCFAs which are acetate, propionate, and butyrate) to the blood circulation and even to the brain through damaged blood brain barrier (BBB) and may cause protein aggregation which are implicated in the pathogenesis of several neurodegenerative diseases like Alzheimer’s disease (AD), Parkinson’s disease (PD), prion disease, motor neuron disease, Huntington’s disease (HD), Amyotrophic lateral sclerosis (ALS). Specifically, butyric acid are the main SCFA product that may impact on gut health. Therefore, this article aims to investigate the transport and kinetic properties such as diffusion coefficient, activation energy and <em>radial</em> distribution function of butyric acid in water at different temperatures through molecular dynamics simulations. The self and binary diffusion coefficient of butyric acid in water obtained from our MD simulation are found to be <span><math><mrow><mn>0.8699</mn><mo>×</mo><msup><mn>10</mn><mrow><mo>−</mo><mn>9</mn></mrow></msup><msup><mi>m</mi><mn>2</mn></msup><msup><mi>s</mi><mrow><mo>−</mo><mn>1</mn></mrow></msup></mrow></math></span> and <span><math><mrow><mn>0.8714</mn><mo>×</mo><msup><mn>10</mn><mrow><mo>−</mo><mn>9</mn></mrow></msup><msup><mi>m</mi><mn>2</mn></msup><msup><mi>s</mi><mrow><mo>−</mo><mn>1</mn></mrow></msup></mrow></math></span>, respectively at 300 K and the activation energy for self-diffusion coefficient of water estimated from the slope of <span><math><mrow><mi>l</mi><mi>n</mi><mo>(</mo><mi>D</mi><mo>)</mo></mrow></math></span> versus <span><math><mrow><mn>1</mn><mo>/</mo><mi>T</mi></mrow></math></span> is equal to 16.07 kJ/mol. Our results are in accordance with those obtained from the experimental values. This study offers an alternate approach to researching the diffusion of butyric acid in living organisms. This knowledge contributes to advancements in various fields, including nutrition, gastroenterology, microbiology, and pharmacology.</div></div>","PeriodicalId":9758,"journal":{"name":"Chemical Physics Impact","volume":null,"pages":null},"PeriodicalIF":3.8,"publicationDate":"2024-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142324084","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Safeena Zafar , Bilal Ahmad Khan , Ikhtiar Ahmad , Muhammad Naeem Ahmed , Aroosa Zafar , Rasool Khan , Mohamed A. El-Tayeb , Ahmed M. Awad , Tamer Shoeib , Mahmoud A.A. Ibrahim
{"title":"Elucidating the potential of bimetallic mixed metal oxide (FeO/NiO) in fusion with pristine and N- and S-doped graphene oxide for biomedical applications","authors":"Safeena Zafar , Bilal Ahmad Khan , Ikhtiar Ahmad , Muhammad Naeem Ahmed , Aroosa Zafar , Rasool Khan , Mohamed A. El-Tayeb , Ahmed M. Awad , Tamer Shoeib , Mahmoud A.A. Ibrahim","doi":"10.1016/j.chphi.2024.100748","DOIUrl":"10.1016/j.chphi.2024.100748","url":null,"abstract":"<div><div>Antimicrobial resistance is attributed to acquiring new mechanisms by microbes to combat antimicrobial agents, highlighting the necessity to discover new antimicrobial agents to protect human health. Graphene and its derivatives have shown antimicrobial potential due to their physical and chemical distinctive features. Potent antibacterial properties were observed by decorating the surface of graphene and its derivatives with inorganic nanoparticles, such as metal and metal oxide. In an attempt to reliably overcome antimicrobial resistance, the multifunctional nanocomposites, including FeO/NiO, FeO/NiO/GO, FeO/NiO/N-GO, and FeO/NiO/S-GO, were synthesized using a wet chemical method. Accordingly, the structural analysis was performed using X-ray diffraction (XRD), infrared spectroscopy (IR), energy dispersive X-ray (EDX), ultraviolet-visible spectroscopy (UV–vis), and scanning electron microscopy (SEM). For antibacterial potential, the synthesized nanocomposites were tested against non-resistant and resistant strains of bacteria. Notably, moderate antibacterial potential was found for FeO/NiO/N-GO nanocomposite with a MIC value of 12.5 μg/mL, compared to the MIC of pure Ciprofloxacin, a positive control, with a value of 1.25 μg/mL. Toward antifungal potential, the synthesized nanocomposites were assessed against various spores of fungal strains. In this regard, the synthesized nanocomposites were demonstrated as potent antifungal agents. Among the synthesized nanocomposites, FeO/NiO and FeO/NiO/S-GO exhibited the highest ZOI against <em>Aspergillus flavus</em>. Additionally, the activity of these nanocomposites was evaluated by means of total reducing power (TRP), total antioxidant capacity (TAC), and free radical scavenging. Further, the antioxidant, brine shrimp lethality, and hemolytic potential of the synthesized nanocomposites were evaluated to compare their effectiveness. According to brine shrimp lethality, all synthesized nanocomposites were sufficiently active, with a calculated median lethal concentration (LC<sub>50</sub>) showing ≥ 50 % mortality. The obtained results provide a promising base for the incorporation of nanocomposites in pharmaceutical and biomedical products.</div></div>","PeriodicalId":9758,"journal":{"name":"Chemical Physics Impact","volume":null,"pages":null},"PeriodicalIF":3.8,"publicationDate":"2024-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142358815","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}