Botanical StudiesPub Date : 2024-04-29DOI: 10.1186/s40529-024-00418-y
Xin-Jian Zhang, Kang-Zheng Jiang, Xin-Yuan Kuai, Jun-Tong Chen, Peng-Rui Luo, Hang Sun, Tao Deng
{"title":"Taxonomic resurrection of Saxifraga lancangensis (Saxifragaceae)","authors":"Xin-Jian Zhang, Kang-Zheng Jiang, Xin-Yuan Kuai, Jun-Tong Chen, Peng-Rui Luo, Hang Sun, Tao Deng","doi":"10.1186/s40529-024-00418-y","DOIUrl":"https://doi.org/10.1186/s40529-024-00418-y","url":null,"abstract":"Accurate species delimitation is fundamental for testing evolutionary theory and provides essential implications for conservation management. The arctic-alpine genus Saxifraga L. (Saxifragaceae) is taxonomically complex and many species have not been critically assessed. The taxonomic and phylogenetic status of Saxifraga lancangensis Y.Y.Qian, considered as a synonym of Saxifraga mengtzeana Engl. & Irmsch. in previous studies, is re-evaluated in light of new evidence presented here. Evidence from morphological comparison and sequencing of plastid genome indicate that S. lancangensis belongs to Saxifraga sect. Irregulares Haw., and is closely related to Saxifraga geifolia Balf.f., and S. mengtzeana. However, S. lancangensis can be diagnosed by its petals with red and clawless base, leaf blade orbicular and leaf margin shallowly dentate. The morphological and molecular evidence support the resurrection of S. lancangensis as a distinct species. An updated morphological description based on protologue and fresh material, diagnostic characters, and original photographs of the resurrected species are presented.","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-04-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140810523","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Gas exchange and chlorophyll fluorescence responses of Camellia sinensis grown under various cultivations in different seasons.","authors":"Chung-I Chen, Kuan-Hung Lin, Meng-Yuan Huang, Chih-Kai Yang, Yu-Hsiu Lin, Mei-Li Hsueh, Li-Hua Lee, Shiou-Ruei Lin, Ching-Wen Wang","doi":"10.1186/s40529-024-00416-0","DOIUrl":"10.1186/s40529-024-00416-0","url":null,"abstract":"<p><p>Sod culture (SC) and conventional agriculture (CA) represent two distinct field management approaches utilized in the cultivation of tea plants in Taiwan. In this study, we employed gas exchange and chlorophyll fluorescence techniques to assess the impact of SC and CA methods on the photosynthetic machinery of Camellia sinensis cv. TTES No.12 (Jhinhsuan) in response to variable light intensities across different seasons. In spring, at photosynthetic photon flux densities (PPFD) ranging from 800 to 2,000 μmol photon m<sup>-2</sup> s<sup>-1</sup>, the net photosynthesis rate (Pn, 10.43 μmol CO<sub>2</sub> m<sup>-2</sup> s<sup>-1</sup>), stomatal conductance (Gs, 126.11 mmol H<sub>2</sub>O m<sup>-2</sup> s<sup>-1</sup>), electron transport rate (ETR, 137.94), and ΔF/Fm' and Fv/Fm (50.37) values for plants grown using SC were comparatively higher than those cultivated under CA. Conversely, the non-photochemical quenching (NPQ) values for SC-grown plants were relatively lower (3.11) compared to those grown under CA at 800 to 2,000 PPFD in spring. Additionally, when tea plants were exposed to PPFD levels below 1,500 μmol photon m<sup>- 2</sup> s<sup>- 1</sup>, there was a concurrent increase in Pn, Gs, ETR, and NPQ. These photosynthetic parameters are crucial for devising models that optimize cultivation practices across varying seasons and specific tillage requirements, and for predicting photosynthetic and respiratory responses of tea plants to seasonally or artificially altered light irradiances. The observed positive impacts of SC on maximum photosynthetic rate (Amax), Fv/Fm, Gs, water-use efficiency (WUE), and ETR suggest that SC is advantageous for enhancing the productivity of tea plants, thereby offering a more adaptable management model for tea gardens.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-03-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10957798/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140183788","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Dynamic of land use and vegetation change in the eastern bank of Bénoué (North Cameroon).","authors":"Djosebe Azaria, Froumsia Moksia, Tchobsala, Kamblaba Pierre, Prudence Tezore Bakary","doi":"10.1186/s40529-024-00413-3","DOIUrl":"10.1186/s40529-024-00413-3","url":null,"abstract":"<p><p>The eastern part of the Benoue River bank is undergoing degradation marked by a significant decrease in vegetation cover and woody resources due to anthropogenic activities and climatic. The main objective of this study is to analyze the farmers' knowledge of vegetation evolution and the dynamics of land use using satellite images in the east of the bank of the Benoue. The methodological approach used is an integrated one combining field surveys, remote sensing, mapping, and modeling. The results obtained show that 88% of the population surveyed believe that the area covered by vegetation has decreased. The reasons for this decrease are numerous, but the main one remains the strong anthropic activity that would be at the origin of the progressive degradation of the land. The evolutionary trend of plant formations is essentially regressive for natural formations from 1991 to 2021. The analysis of the evolution of land use showed that in the Rey-Bouba district during 1991, 58.24% of the area formerly made up of dense woody formations regressed considerably to 25.77% in 2021. The same is true for the Bibemi district where the area of wooded zone has decreased from 65.47% in 1991 to 28.45% of the total area in 2021. This regression of the surface area of wooded formations was done to the benefit of anthropized occupation classes whose area has increased. They suggest an effective awareness in the monitoring of the dynamics of the vegetation cover subjected to anthropic pressures and climatic variations for a better-integrated management of the vegetation of this area.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-03-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10937873/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140118795","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Hypoglycemic effects of dracorhodin and dragon blood crude extract from Daemonorops draco.","authors":"Yung-Hao Ching, Fang-Mei Lin, Hong-Chi Chen, Ching-Yun Hsu, Sze Yen P'ng, Tai-No Lin, Yu-Chia Wang, Cheng-Jun Lin, Yi-Chi Chen, Tsung-Jung Ho, Hao-Ping Chen","doi":"10.1186/s40529-024-00415-1","DOIUrl":"10.1186/s40529-024-00415-1","url":null,"abstract":"<p><strong>Background: </strong>Dragon blood is a red fruit resin from the palm tree Daemonorops draco and is a herbal ingredient used in the traditional Chinese medicine, \"Jinchuang Ointment,\" which is used to treat non-healing diabetic wounds. According to the Taiwan Herbal Pharmacopeia, the dracorhodin content in dragon blood should exceed 1.0%.</p><p><strong>Results: </strong>Our findings indicate that dracorhodin and dragon blood crude extracts can stimulate glucose uptake in mouse muscle cells (C2C12) and primary rat aortic smooth muscle cells (RSMC). Dracorhodin is not the only active compound in dragon blood crude extracts from D. draco. Next, we orally administered crude dragon blood extracts to male B6 mice. The experimental group displayed a decreasing trend in fasting blood glucose levels from the second to tenth week. In summary, crude extracts of dragon blood from D. draco demonstrated in vivo hypoglycemic effects in B6 male mice.</p><p><strong>Conclusions: </strong>We provide a scientific basis \"Jinchuang ointment\" in treating non-healing wounds in patients with diabetes.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-03-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10917723/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140038717","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2024-03-01DOI: 10.1186/s40529-024-00414-2
Roy Watling
{"title":"An uncut copy of Scleromyceti Sueciae: lost and then found.","authors":"Roy Watling","doi":"10.1186/s40529-024-00414-2","DOIUrl":"10.1186/s40529-024-00414-2","url":null,"abstract":"<p><strong>Background: </strong>A copy of Scleromyceti Sueciae, a work on which the nomenclature of many fungi is based was known to occur in Scotland's Glasgow University Botany Department but the buildings were devastated by fire in 2001 and the whereabouts of this important work, if it existed, was lost. Its re-finding is reported herein.</p><p><strong>Results: </strong>The Glasgow copy of Scleromyceti Sueciae, an uncut first edition of Fries' work, was located in the Glasgow Museums in its original cabinet being transferred there years before the fire and its specimens being now databased. It is one of the few existing uncut copies of this important scientific work and one of the best-preserved copies of the first edition.</p><p><strong>Conclusion: </strong>The discovery of this first edition of Scleromyceti Sueciae emphasizes the significance to reserve special conservation for important collections by early mycologists. It also allows interested mycologists world-wide to know of the existence in Glasgow of an uncut, first edition copy.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10907328/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139995600","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2024-02-13DOI: 10.1186/s40529-024-00412-4
Simrat Singh, Chad Thomas Miller, Parminder Singh, Rishu Sharma, Nepu Rana, Ashok Kumar Dhakad, Rajesh Kumar Dubey
{"title":"A comprehensive review on ecology, life cycle and use of Tecoma stans (bignoneaceae).","authors":"Simrat Singh, Chad Thomas Miller, Parminder Singh, Rishu Sharma, Nepu Rana, Ashok Kumar Dhakad, Rajesh Kumar Dubey","doi":"10.1186/s40529-024-00412-4","DOIUrl":"10.1186/s40529-024-00412-4","url":null,"abstract":"<p><p>Tecoma stans is a widely distributed tall ornamental shrub in the plains of Indian subcontinent and is considered an invasive species across Argentina, Australia, South Africa, Pacific Islands and tropical regions of Asia. Besides having an ornamental significance, T. stans has been extensively investigated for its pharmaceutical applications as a source of bioactive compounds. In addition, the shrub is cultivated commercially as a potted flowering plant. We believe that T. stans, being a hardy, invasive and aggressively growing species, holds a considerable potential and a promising solution for re-greening waste and degraded lands outside its invasive range, due to its wider adaptability and drought tolerant characteristics. The shrub is an excellent source of pollen and nectar, that attracts diverse insect-pollinators and several species of birds. The prudent plantation of this shrub has the potential to restore the ecology of barren landscapes, that can change its perspective of 'being invasive' to 'being ecologically healthy' across the tropical, semi-arid and subtropical regions worldwide. This paper reviews the current updates on ecology, life cycle including morphology, plant growth characteristics, flowering phenology, reproductive biology, breeding system and fruiting of T. stans. In addition, details on insect-pollinator diversity and natural regeneration potential have also been discussed, besides highlighting its therapeutic and landscape use.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10861415/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139721661","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2024-01-26DOI: 10.1186/s40529-024-00410-6
Chih-Chung Yen, Chia-Mei Hsu, Pei-Luen Jiang, Guang-Yuh Jauh
{"title":"Dynamic organelle changes and autophagic processes in lily pollen germination.","authors":"Chih-Chung Yen, Chia-Mei Hsu, Pei-Luen Jiang, Guang-Yuh Jauh","doi":"10.1186/s40529-024-00410-6","DOIUrl":"10.1186/s40529-024-00410-6","url":null,"abstract":"<p><p>Pollen germination is a crucial process in the life cycle of flowering plants, signifying the transition of quiescent pollen grains into active growth. This study delves into the dynamic changes within organelles and the pivotal role of autophagy during lily pollen germination. Initially, mature pollen grains harbor undifferentiated organelles, including amyloplasts, mitochondria, and the Golgi apparatus. However, germination unveils remarkable transformations, such as the redifferentiation of amyloplasts accompanied by starch granule accumulation. We investigate the self-sustained nature of amylogenesis during germination, shedding light on its association with osmotic pressure. Employing BODIPY 493/503 staining, we tracked lipid body distribution throughout pollen germination, both with or without autophagy inhibitors (3-MA, NEM). Typically, lipid bodies undergo polarized movement from pollen grains into elongating pollen tubes, a process crucial for directional growth. Inhibiting autophagy disrupted this essential lipid body redistribution, underscoring the interaction between autophagy and lipid body dynamics. Notably, the presence of tubular endoplasmic reticulum (ER)-like structures associated with developing amyloplasts and lipid bodies implies their participation in autophagy. Starch granules, lipid bodies, and membrane remnants observed within vacuoles further reinforce the involvement of autophagic processes. Among the autophagy inhibitors, particularly BFA, significantly impede germination and growth, thereby affecting Golgi morphology. Immunogold labeling substantiates the pivotal role of the ER in forming autophagosome-like compartments and protein localization. Our proposed speculative model of pollen germination encompasses proplastid differentiation and autophagosome formation. This study advances our understanding of organelle dynamics and autophagy during pollen germination, providing valuable insights into the realm of plant reproductive physiology.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-01-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10811312/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139563346","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2024-01-22DOI: 10.1186/s40529-024-00411-5
Hina Talib, Ansar Mehmood, Muhammad Shoaib Amjad, Amna Mustafa, Muhammad Abdul Rauf Khan, Muhammad Raffi, Rizwan Taj Khan, Khawaja Shafique Ahmad, Huma Qureshi
{"title":"Antibacterial, antioxidant, and anticancer potential of green fabricated silver nanoparticles made from Viburnum grandiflorum leaf extract.","authors":"Hina Talib, Ansar Mehmood, Muhammad Shoaib Amjad, Amna Mustafa, Muhammad Abdul Rauf Khan, Muhammad Raffi, Rizwan Taj Khan, Khawaja Shafique Ahmad, Huma Qureshi","doi":"10.1186/s40529-024-00411-5","DOIUrl":"10.1186/s40529-024-00411-5","url":null,"abstract":"<p><strong>Background: </strong>Recently, researchers are focusing on creating new tools to combat the antibiotic resistant bacteria and malignancy issues, which pose significant threats to humanity. Biosynthesized silver nanoparticles (AgNPs) are thought to be a potential solution to these issues. The biosynthesis method, known for its environmentally friendly and cost-effective characteristics, can produce small-sized AgNPs with antimicrobial and anticancer properties. In this study, AgNPs were bio-fabricated from the distilled water and methanolic extracts of Viburnum grandiflorum leaves. Physio-chemical characterization of the bio-fabricated AgNPs was conducted using UV-visible spectroscopy, scanning electron microscopy, energy dispersive X-ray, and X-ray diffraction analysis.</p><p><strong>Results: </strong>AgNPs produced from the methanol extract were smaller in size (12.28 nm) compared to those from the aqueous extract (17.77 nm). The bioengineered AgNPs exhibited a circular shape with a crystalline nature. These biosynthesized AgNPs demonstrated excellent bactericidal activity against both gram-negative (Pseudomonas aeruginosa) and gram-positive (Staphylococcus aureus) bacteria. Highest antibacterial activity was observed with the methanol extract against P. aeruginosa (14.66 ± 0.74 mm). AgNPs from the methanol extract also displayed the highest antioxidant activity, with an IC<sub>50</sub> value of 188.00 ± 2.67 μg/mL against 2,2-diphenyl-1-picrylhydrazyl (DPPH). Furthermore, AgNPs exhibited notable cytotoxic activity against Rhabdomyosarcoma cell line (RD cell) of human muscle cancer cell. The IC<sub>50</sub> values calculated from the MTT assay were 26.28 ± 1.58 and 21.49 ± 1.44 μg/mL for AgNPs synthesized from aqueous and methanol extracts, respectively.</p><p><strong>Conclusion: </strong>The methanol extract of V. grandiflorum leaves demonstrates significant potential for synthesizing AgNPs with effective antibacterial, antioxidant, and anticancer actions, making them applicable in various biomedical applications.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10803688/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139511751","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A taxonomic revision of the genus Angelica (Apiaceae) in Taiwan with a new species A. aliensis.","authors":"Jenn-Che Wang, Hung-Hsin Chen, Tsai-Wen Hsu, Kuo-Hsiang Hung, Chi-Chun Huang","doi":"10.1186/s40529-023-00407-7","DOIUrl":"10.1186/s40529-023-00407-7","url":null,"abstract":"<p><strong>Background: </strong>Angelica L. sensu lato is a taxonomically complex genus, and many studies have utilized morphological and molecular features to resolve its classification issues. In Taiwan, there are six taxa within Angelica, and their taxonomic treatments have been a subject of controversy. In this study, we conducted a comprehensive analysis incorporating morphological and molecular (cpDNA and nrDNA) characteristics to revise the taxonomic treatments of Angelica in Taiwan.</p><p><strong>Results: </strong>As a result of our research, we have revised the classification between A. dahurica var. formosana and A. pubescens and merged two varieties of A. morrisonicola into a single taxon. A new taxon, A. aliensis, has been identified and found to share a close relationship with A. tarokoensis. Based on the morphological and molecular characteristics data, it has been determined that the former three taxa should be grouped into the Eurasian Angelica clade, while the remaining four taxa should belong to the littoral Angelica clade. Furthermore, Angelica species in Taiwan distributed at higher altitudes displayed higher genetic diversity, implying that the central mountain range of Taiwan serves as a significant reservoir of plant biodiversity. Genetic drift, such as bottlenecks, has been identified as a potential factor leading to the fixation or reduction of genetic diversity of populations in most Angelica species. We provide key to taxa, synopsis, phenology, and distribution for each taxon of Taiwan.</p><p><strong>Conclusions: </strong>Our comprehensive analysis of morphological and molecular features has shed light on the taxonomic complexities within Angelica in Taiwan, resolving taxonomic issues and providing valuable insights into the phylogenetic relationships of Angelica in Taiwan.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10803708/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139511749","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2024-01-09DOI: 10.1186/s40529-024-00409-z
Jinhong Yuan, Daiyu Li, Yi Liang, Yao Meng, Li Li, Lin Yang, Mingyue Pei, Liuchun Feng, Junhua Li
{"title":"An optimum study on the laser scanning confocal microscopy techniques for BiFC assay using plant protoplast.","authors":"Jinhong Yuan, Daiyu Li, Yi Liang, Yao Meng, Li Li, Lin Yang, Mingyue Pei, Liuchun Feng, Junhua Li","doi":"10.1186/s40529-024-00409-z","DOIUrl":"10.1186/s40529-024-00409-z","url":null,"abstract":"<p><strong>Background: </strong>The bimolecular fluorescence complementation (BiFC) assay is commonly used for investigating protein-protein interactions. While several BiFC detection systems have been developed, there is a limited amount of research focused on using laser scanning confocal microscope (LSCM) techniques to observe protoplasts. Protoplasts are more susceptible to damage and instability compared to their original cell state due to the preparation treatments they undergo, which makes it challenging for researchers to manipulate them during observation under LSCMs. Therefore, it is crucial to utilize microscope techniques properly and efficiently in BiFC assays.</p><p><strong>Results: </strong>When the target fluorescence is weak, the autofluorescence of chloroplast particles in protoplasts can interfere with the detection of BiFC signals localized in the nuclear region. Spectrum analysis revealed that chloroplast autofluorescence can be excited by lasers of various types, with the highest fluorescence signal observed at around 660 nm. Furthermore, our investigation into the impact of different pipette tips on the integrity of protoplast samples indicated that the utilization of cut tips with larger openings can mitigate cell breakage. We presented a workflow of LSCM techniques for investigating protoplast BiFC and discussed the microscopic manipulation involved in sample preparation and image capturing.</p><p><strong>Conclusion: </strong>When the BiFC signals are weak, they may be affected by chloroplast autofluorescence. However, when used properly, the autofluorescence of chloroplasts can serve as an excellent internal marker for effectively distinguishing other signals. In combination with other findings, this study can provide valuable reference for researchers conducting BiFC assays and related studies.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10776556/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139401839","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}