Annual review of phytopathology最新文献_第4页

Tomato Brown Rugose Fruit Virus Pandemic. 番茄褐果病毒大流行。

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2023-09-05 Epub Date: 2023-06-02 DOI: 10.1146/annurev-phyto-021622-120703

Nida' M Salem, Ahmad Jewehan, Miguel A Aranda, Adrian Fox

引用次数: 5

The Past Is Present: Coevolution of Viruses and Host Resistance Within Geographic Centers of Plant Diversity. 过去就是现在：植物多样性地理中心内病毒和宿主抗性的共同进化。

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2023-09-05 Epub Date: 2023-05-30 DOI: 10.1146/annurev-phyto-021621-113819

Karen-Beth G Scholthof

{"title":"The Past Is Present: Coevolution of Viruses and Host Resistance Within Geographic Centers of Plant Diversity.","authors":"Karen-Beth G Scholthof","doi":"10.1146/annurev-phyto-021621-113819","DOIUrl":"10.1146/annurev-phyto-021621-113819","url":null,"abstract":"Understanding the coevolutionary history of plants, pathogens, and disease resistance is vital for plant pathology. Here, I review Francis O. Holmes's work with tobacco mosaic virus (TMV) framed by the foundational work of Nikolai Vavilov on the geographic centers of origin of plants and crop wild relatives (CWRs) and T. Harper Goodspeed's taxonomy of the genus Nicotiana. Holmes developed a hypothesis that the origin of host resistance to viruses was due to coevolution of both at a geographic center. In the 1950s, Holmes proved that genetic resistance to TMV, especially dominant R-genes, was centered in South America for Nicotiana and other solanaceous plants, including Capsicum, potato, and tomato. One seeming exception was eggplant (Solanum melongena). Not until the acceptance of plate tectonics in the 1960s and recent advances in evolutionary taxonomy did it become evident that northeast Africa was the home of eggplant CWRs, far from Holmes's geographic center for TMV-R-gene coevolution. Unbeknownst to most plant pathologists, Holmes's ideas predated those of H.H. Flor, including experimental proof of the gene-for-gene interaction, identification of R-genes, and deployment of dominant host genes to protect crop plants from virus-associated yield losses.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":"61 ","pages":"119-136"},"PeriodicalIF":10.2,"publicationDate":"2023-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10155190","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 1

Traffic Control: Subversion of Plant Membrane Trafficking by Pathogens. 交通管制：病原体对植物膜运输的颠覆。

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2023-09-05 Epub Date: 2023-05-15 DOI: 10.1146/annurev-phyto-021622-123232

Enoch Lok Him Yuen, Samuel Shepherd, Tolga O Bozkurt

引用次数: 2

Integrated Nematode Management in a World in Transition: Constraints, Policy, Processes, and Technologies for the Future. 转型世界中的综合线虫管理：未来的制约因素、政策、流程和技术。

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2023-09-05 Epub Date: 2023-05-15 DOI: 10.1146/annurev-phyto-021622-113058

Richard A Sikora, Johannes Helder, Leendert P G Molendijk, Johan Desaeger, Sebastian Eves-van den Akker, Anne-Katrin Mahlein

{"title":"Integrated Nematode Management in a World in Transition: Constraints, Policy, Processes, and Technologies for the Future.","authors":"Richard A Sikora, Johannes Helder, Leendert P G Molendijk, Johan Desaeger, Sebastian Eves-van den Akker, Anne-Katrin Mahlein","doi":"10.1146/annurev-phyto-021622-113058","DOIUrl":"10.1146/annurev-phyto-021622-113058","url":null,"abstract":"Plant-parasitic nematodes are one of the most insidious pests limiting agricultural production, parasitizing mostly belowground and occasionally aboveground plant parts. They are an important and underestimated component of the estimated 30% yield loss inflicted on crops globally by biotic constraints. Nematode damage is intensified by interactions with biotic and abiotic factors constraints: soilborne pathogens, soil fertility degradation, reduced soil biodiversity, climate variability, and policies influencing the development of improved management options. This review focuses on the following topics: (a) biotic and abiotic constraints, (b) modification of production systems, (c) agricultural policies, (d) the microbiome, (e) genetic solutions, and (f) remote sensing. Improving integrated nematode management (INM) across all scales of agricultural production and along the Global North-Global South divide, where inequalities influence access to technology, is discussed. The importance of the integration of technological development in INM is critical to improving food security and human well-being in the future.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":"61 ","pages":"209-230"},"PeriodicalIF":10.2,"publicationDate":"2023-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10148738","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 1

Phytophthora capsici: Recent Progress on Fundamental Biology and Disease Management 100 Years After Its Description. 辣椒疫霉菌：描述100年后基础生物学和疾病管理的最新进展。

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2023-09-05 Epub Date: 2023-05-31 DOI: 10.1146/annurev-phyto-021622-103801

L M Quesada-Ocampo, C H Parada-Rojas, Z Hansen, G Vogel, C Smart, M K Hausbeck, R M Carmo, E Huitema, R P Naegele, C S Kousik, P Tandy, K Lamour

{"title":"Phytophthora capsici: Recent Progress on Fundamental Biology and Disease Management 100 Years After Its Description.","authors":"L M Quesada-Ocampo, C H Parada-Rojas, Z Hansen, G Vogel, C Smart, M K Hausbeck, R M Carmo, E Huitema, R P Naegele, C S Kousik, P Tandy, K Lamour","doi":"10.1146/annurev-phyto-021622-103801","DOIUrl":"10.1146/annurev-phyto-021622-103801","url":null,"abstract":"Phytophthora capsici is a destructive oomycete pathogen of vegetable, ornamental, and tropical crops. First described by L.H. Leonian in 1922 as a pathogen of pepper in New Mexico, USA, P. capsici is now widespread in temperate and tropical countries alike. Phytophthora capsici is notorious for its capability to evade disease management strategies. High genetic diversity allows P. capsici populations to overcome fungicides and host resistance, the formation of oospores results in long-term persistence in soils, zoospore differentiation in the presence of water increases epidemic potential, and a broad host range maximizes economic losses and limits the effectiveness of crop rotation. The severity of disease caused by P. capsici and management challenges have led to numerous research efforts in the past 100 years. Here, we discuss recent findings regarding the biology, genetic diversity, disease management, fungicide resistance, host resistance, genomics, and effector biology of P. capsici.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":"61 ","pages":"185-208"},"PeriodicalIF":10.2,"publicationDate":"2023-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10148769","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 2

Ralstonia solanacearum: An Arsenal of Virulence Strategies and Prospects for Resistance. 青枯菌：毒力策略和抗性前景的武器库。

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2023-09-05 Epub Date: 2023-07-28 DOI: 10.1146/annurev-phyto-021622-104551

Fabienne Vailleau, Stéphane Genin

引用次数: 1

Engineering the Crop Microbiota Through Host Genetics. 通过宿主遗传学设计作物微生物群。

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2023-09-05 Epub Date: 2023-05-17 DOI: 10.1146/annurev-phyto-021621-121447

Carmen Escudero-Martinez, Davide Bulgarelli

{"title":"Engineering the Crop Microbiota Through Host Genetics.","authors":"Carmen Escudero-Martinez, Davide Bulgarelli","doi":"10.1146/annurev-phyto-021621-121447","DOIUrl":"10.1146/annurev-phyto-021621-121447","url":null,"abstract":"The microbiota populating the plant-soil continuum defines an untapped resource for sustainable crop production. The host plant is a driver for the taxonomic composition and function of these microbial communities. In this review, we illustrate how the host genetic determinants of the microbiota have been shaped by plant domestication and crop diversification. We discuss how the heritable component of microbiota recruitment may represent, at least partially, a selection for microbial functions underpinning the growth, development, and health of their host plants and how the magnitude of this heritability is influenced by the environment. We illustrate how host-microbiota interactions can be treated as an external quantitative trait and review recent studies associating crop genetics with microbiota-based quantitative traits. We also explore the results of reductionist approaches, including synthetic microbial communities, to establish causal relationships between microbiota and plant phenotypes. Lastly, we propose strategies to integrate microbiota manipulation into crop selection programs. Although a detailed understanding of when and how heritability for microbiota composition can be deployed for breeding purposes is still lacking, we argue that advances in crop genomics are likely to accelerate wider applications of plant-microbiota interactions in agriculture.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":"61 ","pages":"257-277"},"PeriodicalIF":10.2,"publicationDate":"2023-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10511465","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 2

Climate Change Effects on Pathogen Emergence: Artificial Intelligence to Translate Big Data for Mitigation. 气候变化对病原体出现的影响：人工智能翻译大数据以缓解。

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2022-06-01 DOI: 10.1146/annurev-phyto-021021-042636

K. Garrett, D. Bebber, B. Etherton, K. Gold, A. I. P. Sulá, M. Selvaraj

{"title":"Climate Change Effects on Pathogen Emergence: Artificial Intelligence to Translate Big Data for Mitigation.","authors":"K. Garrett, D. Bebber, B. Etherton, K. Gold, A. I. P. Sulá, M. Selvaraj","doi":"10.1146/annurev-phyto-021021-042636","DOIUrl":"https://doi.org/10.1146/annurev-phyto-021021-042636","url":null,"abstract":"Plant pathology has developed a wide range of concepts and tools for improving plant disease management, including models for understanding and responding to new risks from climate change. Most of these tools can be improved using new advances in artificial intelligence (AI), such as machine learning to integrate massive data sets in predictive models. There is the potential to develop automated analyses of risk that alert decision-makers, from farm managers to national plant protection organizations, to the likely need for action and provide decision support for targeting responses. We review machine-learning applications in plant pathology and synthesize ideas for the next steps to make the most of these tools in digital agriculture. Global projects, such as the proposed global surveillance system for plant disease, will be strengthened by the integration of the wide range of new data, including data from tools like remote sensors, that are used to evaluate the risk of plant disease. There is exciting potential for the use of AI to strengthen global capacity building as well, from image analysis for disease diagnostics and associated management recommendations on farmers' phones to future training methodologies for plant pathologists that are customized in real-time for management needs in response to the current risks. International cooperation in integrating data and models will help develop the most effective responses to new challenges from climate change. Expected final online publication date for the Annual Review of Phytopathology, Volume 60 is August 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":""},"PeriodicalIF":10.2,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43181273","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 9

Mycovirus Diversity and Evolution Revealed/Inferred from Recent Studies. 从最近的研究中揭示/推断的真菌病毒多样性和进化。

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2022-05-24 DOI: 10.1146/annurev-phyto-021621-122122

H. Kondō, L. Botella, N. Suzuki

{"title":"Mycovirus Diversity and Evolution Revealed/Inferred from Recent Studies.","authors":"H. Kondō, L. Botella, N. Suzuki","doi":"10.1146/annurev-phyto-021621-122122","DOIUrl":"https://doi.org/10.1146/annurev-phyto-021621-122122","url":null,"abstract":"High-throughput virome analyses with various fungi, from cultured or uncultured sources, have led to the discovery of diverse viruses with unique genome structures and even neo-lifestyles. Examples in the former category include splipalmiviruses and ambiviruses. Splipalmiviruses, related to yeast narnaviruses, have multiple positive-sense (+) single-stranded (ss) RNA genomic segments that separately encode the RNA-dependent RNA polymerase motifs, the hallmark of RNA viruses (members of the kingdom Orthornavirae). Ambiviruses appear to have an undivided ssRNA genome of 3∼5 kb with two large open reading frames (ORFs) separated by intergenic regions. Another narna-like virus group has two fully overlapping ORFs on both strands of a genomic segment that span more than 90% of the genome size. New virus lifestyles exhibited by mycoviruses include the yado-kari/yado-nushi nature characterized by the partnership between the (+)ssRNA yadokarivirus and an unrelated dsRNA virus (donor of the capsid for the former) and the hadaka nature of capsidless 10-11 segmented (+)ssRNA accessible by RNase in infected mycelial homogenates. Furthermore, dsRNA polymycoviruses with phylogenetic affinity to (+)ssRNA animal caliciviruses have been shown to be infectious as dsRNA-protein complexes or deproteinized naked dsRNA. Many previous phylogenetic gaps have been filled by recently discovered fungal and other viruses, which have provided interesting evolutionary insights. Phylogenetic analyses and the discovery of natural and experimental cross-kingdom infections suggest that horizontal virus transfer may have occurred and continue to occur between fungi and other kingdoms. Expected final online publication date for the Annual Review of Phytopathology, Volume 60 is August 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":""},"PeriodicalIF":10.2,"publicationDate":"2022-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44039790","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 43

Facilitating Reforestation Through the Plant Microbiome: Perspectives from the Phyllosphere. 通过植物微生物群落促进再造林:从层层圈的角度。

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2022-05-18 DOI: 10.1146/annurev-phyto-021320-010717

P. Busby, G. Newcombe, Abigail S Neat, C. Averill

{"title":"Facilitating Reforestation Through the Plant Microbiome: Perspectives from the Phyllosphere.","authors":"P. Busby, G. Newcombe, Abigail S Neat, C. Averill","doi":"10.1146/annurev-phyto-021320-010717","DOIUrl":"https://doi.org/10.1146/annurev-phyto-021320-010717","url":null,"abstract":"Tree planting and natural regeneration contribute to the ongoing effort to restore Earth's forests. Our review addresses how the plant microbiome can enhance the survival of planted and naturally regenerating seedlings and serve in long-term forest carbon capture and the conservation of biodiversity. We focus on fungal leaf endophytes, ubiquitous defensive symbionts that protect against pathogens. We first show that fungal and oomycetous pathogen richness varies greatly for tree species native to the United States (n = 0-876 known pathogens per US tree species), with nearly half of tree species either without pathogens in these major groups or with unknown pathogens. Endophytes are insurance against the poorly known and changing threat of tree pathogens. Next, we reviewed studies of plant-phyllosphere feedback, but knowledge gaps prevented us from evaluating whether adding conspecific leaf litter to planted seedlings promotes defensive symbiosis, analogous to adding soil to promote positive feedback. Finally, we discuss research priorities for integrating the plant microbiome into efforts to expand Earth's forests. Expected final online publication date for the Annual Review of Phytopathology, Volume 60 is August 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":""},"PeriodicalIF":10.2,"publicationDate":"2022-05-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42777014","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 9