Annual review of phytopathology最新文献

Functions and Mechanisms of Secreted Proteinaceous Effectors of Broad-Host-Range Necrotrophic Fungal Pathogens. 广域坏死性真菌病原体分泌蛋白效应物的功能和机制。

IF 9.1 1区农林科学

Annual review of phytopathology Pub Date : 2025-05-05 DOI: 10.1146/annurev-phyto-121323-020233

Xiaofan Liu, Yongkun Huang, Weidong Chen, Daohong Jiang, Jiasen Cheng

引用次数: 0

Plant Pathogen Name Game: Cross Kingdom Review for the Naming of Biotic Agents Associated with Plants. 植物病原体命名游戏：与植物相关的生物制剂命名的跨界综述。

IF 9.1 1区农林科学

Annual review of phytopathology Pub Date : 2025-04-23 DOI: 10.1146/annurev-phyto-111424-090412

Carolee T Bull, Catalina Salgado-Salazar, Megan K Romberg, Cavan Allen, Mihail Kantor, Zafar Handoo, Nina Aboughanem-Sabanadzovic, Sead Sabanadzovic, Teresa Coutinho

{"title":"Plant Pathogen Name Game: Cross Kingdom Review for the Naming of Biotic Agents Associated with Plants.","authors":"Carolee T Bull, Catalina Salgado-Salazar, Megan K Romberg, Cavan Allen, Mihail Kantor, Zafar Handoo, Nina Aboughanem-Sabanadzovic, Sead Sabanadzovic, Teresa Coutinho","doi":"10.1146/annurev-phyto-111424-090412","DOIUrl":"https://doi.org/10.1146/annurev-phyto-111424-090412","url":null,"abstract":"To communicate across scientific disciplines, regulatory bodies, and the agricultural community, the naming of plant pathogens assigned to specific taxa is critical. Here, we provide an overview of the nomenclatural systems governing the naming of plant-pathogenic nematodes, fungi, oomycetes, prokaryotes, and viruses. Although we focus on the nature of the nomenclatural codes, we briefly discuss fundamental principles of taxonomy, including classification and identification. Key elements of the codes of nomenclature that ensure stability and clarity when naming species of pathogens are defined. When comparing the practice of nomenclature across different kingdoms, the classification and nomenclatural systems differ, and thus unique challenges are faced. We provide guidance from the codes and current practice for naming novel species. When there are nomenclatural conflicts, international committees play a critical role in their resolution. They also play a role in updating the codes to reflect new advancements in science. With this review, we aim to assist plant pathologists, journal editors, and those in related fields by providing an entrée to the legalistic requirements of the codes. Authors must consult and follow the rules of the appropriate code for any proposal of new or new combinations of names. To those interested in naming new species (or renaming the current ones), we recommend collaborations with experts in the field of taxonomy to ensure that rules for accurate and consistent naming practices and procedures are followed and to increase the likelihood that the proposed nomenclature is correct and acceptable.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":""},"PeriodicalIF":9.1,"publicationDate":"2025-04-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143967820","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Biotechnology and Genomic Approaches to Mitigating Disease Impacts on Forest Health 生物技术和基因组方法减轻病害对森林健康的影响

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2024-09-09 DOI: 10.1146/annurev-phyto-021622-114434

Jared M. LeBoldus, Shannon C. Lynch, Andrew E. Newhouse, Kelsey L. Søndreli, George Newcombe, Patrick I. Bennett, Wellington Muchero, Jin-Gui Chen, Posy E. Busby, Michael Gordon, Haiying Liang

引用次数: 0

Plant Immunity Modulation in Arbuscular Mycorrhizal Symbiosis and Its Impact on Pathogens and Pests 丛枝菌根共生中的植物免疫调节及其对病原体和害虫的影响

IF 10.2 1区农林科学

Annual review of phytopathology Pub Date : 2024-09-09 DOI: 10.1146/annurev-phyto-121423-042014

V. Fiorilli, A. Martínez-Medina, Maria J. Pozo, L. Lanfranco

{"title":"Plant Immunity Modulation in Arbuscular Mycorrhizal Symbiosis and Its Impact on Pathogens and Pests","authors":"V. Fiorilli, A. Martínez-Medina, Maria J. Pozo, L. Lanfranco","doi":"10.1146/annurev-phyto-121423-042014","DOIUrl":"https://doi.org/10.1146/annurev-phyto-121423-042014","url":null,"abstract":"Arbuscular mycorrhizal (AM) symbiosis is the oldest and most widespread mutualistic association on Earth and involves plants and soil fungi belonging to Glomeromycotina. A complex molecular, cellular, and genetic developmental program enables partner recognition, fungal accommodation in plant tissues, and activation of symbiotic functions such as transfer of phosphorus in exchange for carbohydrates and lipids. AM fungi, as ancient obligate biotrophs, have evolved strategies to circumvent plant defense responses to guarantee an intimate and long-lasting mutualism. They are among those root-associated microorganisms able to boost plants’ ability to cope with biotic stresses leading to mycorrhiza-induced resistance (MIR), which can be effective across diverse hosts and against different attackers. Here, we examine the molecular mechanisms underlying the modulation of plant immunity during colonization by AM fungi and at the onset and display of MIR against belowground and aboveground pests and pathogens. Understanding the MIR efficiency spectrum and its regulation is of great importance to optimizing the biotechnological application of these beneficial microbes for sustainable crop protection.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":"81 1","pages":""},"PeriodicalIF":10.2,"publicationDate":"2024-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142178832","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Plant-Driven Assembly of Disease-Suppressive Soil Microbiomes. 植物驱动的疾病抑制性土壤微生物组的组装。

IF 9.1 1区农林科学

Annual review of phytopathology Pub Date : 2024-09-01 Epub Date: 2024-08-22 DOI: 10.1146/annurev-phyto-021622-100127

Jelle Spooren, Sietske van Bentum, Linda S Thomashow, Corné M J Pieterse, David M Weller, Roeland L Berendsen

{"title":"Plant-Driven Assembly of Disease-Suppressive Soil Microbiomes.","authors":"Jelle Spooren, Sietske van Bentum, Linda S Thomashow, Corné M J Pieterse, David M Weller, Roeland L Berendsen","doi":"10.1146/annurev-phyto-021622-100127","DOIUrl":"10.1146/annurev-phyto-021622-100127","url":null,"abstract":"Plants have coevolved together with the microbes that surround them and this assemblage of host and microbes functions as a discrete ecological unit called a holobiont. This review outlines plant-driven assembly of disease-suppressive microbiomes. Plants are colonized by microbes from seed, soil, and air but selectively shape the microbiome with root exudates, creating microenvironment hot spots where microbes thrive. Using plant immunity for gatekeeping and surveillance, host-plant genetic properties govern microbiome assembly and can confer adaptive advantages to the holobiont. These advantages manifest in disease-suppressive soils, where buildup of specific microbes inhibits the causal agent of disease, that typically develop after an initial disease outbreak. Based on disease-suppressive soils such as take-all decline, we developed a conceptual model of how plants in response to pathogen attack cry for help and recruit plant-protective microbes that confer increased resistance. Thereby, plants create a soilborne legacy that protects subsequent generations and forms disease-suppressive soils.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":"1-30"},"PeriodicalIF":9.1,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141299872","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Evolving Archetypes: Learning from Pathogen Emergence on a Nonmodel Host. 不断演变的原型：从病原体在非模式宿主上的出现中学习。

IF 9.1 1区农林科学

Annual review of phytopathology Pub Date : 2024-09-01 Epub Date: 2024-08-22 DOI: 10.1146/annurev-phyto-021622-095110

Markéta Vlková-Žlebková, Fang Wei Yuen, Honour C McCann

{"title":"Evolving Archetypes: Learning from Pathogen Emergence on a Nonmodel Host.","authors":"Markéta Vlková-Žlebková, Fang Wei Yuen, Honour C McCann","doi":"10.1146/annurev-phyto-021622-095110","DOIUrl":"10.1146/annurev-phyto-021622-095110","url":null,"abstract":"Research initiatives undertaken in response to disease outbreaks accelerate our understanding of microbial evolution, mechanisms of virulence and resistance, and plant-pathogen coevolutionary interactions. The emergence and global spread of Pseudomonas syringae pv. actinidiae (Psa) on kiwifruit (Actinidia chinensis) showed that there are parallel paths to host adaptation and antimicrobial resistance evolution, accelerated by the movement of mobile elements. Significant progress has been made in identifying type 3 effectors required for virulence and recognition in A. chinensis and Actinidia arguta, broadening our understanding of how host-mediated selection shapes virulence. The rapid development of Actinidia genomics after the Psa3 pandemic began has also generated new insight into molecular mechanisms of immunity and resistance gene evolution in this recently domesticated, nonmodel host. These findings include the presence of close homologs of known resistance genes RPM1 and RPS2 as well as the novel expansion of CCG10-NLRs (nucleotide-binding leucine-rich repeats) in Actinidia spp. The advances and approaches developed during the pandemic response can be applied to new pathosystems and new outbreak events.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":"49-68"},"PeriodicalIF":9.1,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141417523","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Regulation of Bacterial Growth and Behavior by Host Plant. 寄主植物对细菌生长和行为的调控

IF 9.1 1区农林科学

Annual review of phytopathology Pub Date : 2024-09-01 Epub Date: 2024-08-22 DOI: 10.1146/annurev-phyto-010824-023359

Satoru Nakagami, Zhe Wang, Xiaowei Han, Kenichi Tsuda

引用次数: 0

Disease Management in Regenerative Cropping in the Context of Climate Change and Regulatory Restrictions. 气候变化和监管限制背景下的再生作物病害管理。

IF 9.1 1区农林科学

Annual review of phytopathology Pub Date : 2024-09-01 Epub Date: 2024-08-22 DOI: 10.1146/annurev-phyto-121423-042037

A C Newton, H E Creissen, I A Erreguerena, N D Havis

引用次数: 0

Free-Riding in Plant Health: A Social-Ecological Systems Approach to Collective Action. 自由驾驭植物健康：集体行动的社会生态系统方法》。

IF 9.1 1区农林科学

Annual review of phytopathology Pub Date : 2024-09-01 Epub Date: 2024-08-22 DOI: 10.1146/annurev-phyto-121423-041950

Sara Garcia-Figuera, Sarah R Lowder, Mark N Lubell, Walter F Mahaffee, Neil McRoberts, David H Gent

{"title":"Free-Riding in Plant Health: A Social-Ecological Systems Approach to Collective Action.","authors":"Sara Garcia-Figuera, Sarah R Lowder, Mark N Lubell, Walter F Mahaffee, Neil McRoberts, David H Gent","doi":"10.1146/annurev-phyto-121423-041950","DOIUrl":"10.1146/annurev-phyto-121423-041950","url":null,"abstract":"Plant disease epidemics often transcend land management boundaries, creating a collective-action problem where a group must cooperate in a common effort to maximize individual and group benefits. Drawing upon the social-ecological systems framework and associated design principles, we review variables of resource systems, resource units, actors, and governance systems relevant to collective action in plant health. We identify a need to better characterize how attributes of epidemics determine the usefulness of collective management, what influences actors' decisions to participate, what governance systems fit different plant health threats, and how these subsystems interact to lead to plant health outcomes. We emphasize that there is not a single governance structure that ensures collective action but rather a continuum of structures that depend on the key system variables identified. An integrated social-ecological systems approach to collective action in plant health should enable institutional designs to better fit specific plant health challenges.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":"357-384"},"PeriodicalIF":9.1,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140896976","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Theories for Understanding the Effect of Impact Assessment and Project Evaluation on the Practice of Science. 理解影响评估和项目评价对科学实践的影响的理论。

IF 9.1 1区农林科学

Annual review of phytopathology Pub Date : 2024-09-01 Epub Date: 2024-08-22 DOI: 10.1146/annurev-phyto-080417-050125

Neil McRoberts, Samuel Brinker, Kaity Coleman

{"title":"Theories for Understanding the Effect of Impact Assessment and Project Evaluation on the Practice of Science.","authors":"Neil McRoberts, Samuel Brinker, Kaity Coleman","doi":"10.1146/annurev-phyto-080417-050125","DOIUrl":"10.1146/annurev-phyto-080417-050125","url":null,"abstract":"We examine the phenomenon of impact assessment in the practice of scientific research, paying attention to the context in which project evaluation is used in federally funded research on plant health in the United States. Our analysis, which is derived from systems theory, carries out a particular view of the research process. For the purposes of this review, our use of the term systems theory references the body of interdisciplinary work that deals with the organization and function of complex structures in nature and human society. Key concepts in this body of theory are that both the components and the interactions among components are important in understanding behavior and that, frequently, systems are seen to be hierarchical in structure. The aim of our analysis is to bring to the attention of the plant health community several concepts from the social sciences that might help in understanding how researchers have responded to the increased expectations from funders to provide project evaluations and impact assessments. We generate a synthesis of these theories, which have not previously been used in a unified way, to explain choices in response to newly imposed goals. Although our analysis is motivated by a specific disciplinary focus on plant health, the issues we discuss are general. Thus, we hope the review is useful to a wide range of scientists, science program managers, and policymakers.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":"385-400"},"PeriodicalIF":9.1,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141299875","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0