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Survival mode: physiological adjustments in tree tomato plants during flooding intensities and post-stress responses under shaded conditions 生存模式:树形番茄植株在洪水强度和阴影条件下的胁迫后反应中的生理调节
IF 2.1 3区 农林科学
Trees Pub Date : 2025-07-29 DOI: 10.1007/s00468-025-02636-8
Diego Alejandro Gutiérrez-Villamil, Helber Enrique Balaguera-López, Oscar Humberto Alvarado-Sanabria, Javier Giovanni Álvarez-Herrera, Luz Marina Melgarejo
{"title":"Survival mode: physiological adjustments in tree tomato plants during flooding intensities and post-stress responses under shaded conditions","authors":"Diego Alejandro Gutiérrez-Villamil,&nbsp;Helber Enrique Balaguera-López,&nbsp;Oscar Humberto Alvarado-Sanabria,&nbsp;Javier Giovanni Álvarez-Herrera,&nbsp;Luz Marina Melgarejo","doi":"10.1007/s00468-025-02636-8","DOIUrl":"10.1007/s00468-025-02636-8","url":null,"abstract":"<div><h3>Key message</h3><p>A 4-day or more duration of flooding is considered a critical stress period for tree tomato plants, as they do not recover their plant water status, electron transport in photosystems, or growth during the post-stress period.</p><h3>Abstract</h3><p>The tree tomato (<i>Solanum betaceum</i> Cav.) is a tropical fruit tree affected by climate variability, especially by flooding phenomena, which are projected to increase in the coming years, causing damage to the physiology and development of crops. Therefore, the objective of this research was to characterize the physiological response of the tree tomato in the vegetative stage under different days of flood duration (0, 2, 4, and 6 days) and later in the recovery period (14 days), in plants grown under controlled shade conditions. Stomatal conductance (<i>g</i><sub>s</sub>), leaf water potential (Ψ<sub>leaf</sub>), leaf insertion angle, pigment concentration, chlorophyll <i>a</i> fluorescence, and plant growth were quantified. The results indicated that with 2 days of flooding, <i>g</i><sub>s</sub>, total chlorophyll concentration, root dry weight, and leaf area decreased slightly compared to the control. With 4 days of flooding, the plants showed more significant reductions in <i>g</i><sub>s</sub> and Ψ<sub>leaf</sub>, which allowed the tree tomato to be classified as an isohydric plant. The 6-day flooding completely dehydrated the leaves. In addition, for the 4 and 6 days of flooding, the OJIP curves showed that the plants had lower photosynthetic efficiency, which was reflected in the reduction of the maximum photochemical quantum efficiency <i>Fv/Fm</i>, quantum yields, energy fluxes per reaction center, and linear electron flow (LEF). These parameters were more affected in the recovery period. The carotenoid concentration and non-photochemical dissipation Φ<sub><i>NPQ</i></sub> increased as a photoprotective mechanism to dissipate excess energy. The biomass of the root and the aerial part decreased significantly as the intensity of the flooding increased. These results show that a time greater than or equal to 4 days of flooding with shade in tree tomato plants is considered a critical stress period.</p></div>","PeriodicalId":805,"journal":{"name":"Trees","volume":"39 4","pages":""},"PeriodicalIF":2.1,"publicationDate":"2025-07-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s00468-025-02636-8.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145170888","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Influence of stem layer characteristics on biomass accumulation in forest ecosystems in Benin 茎层特征对贝宁森林生态系统生物量积累的影响
IF 2.1 3区 农林科学
Trees Pub Date : 2025-07-27 DOI: 10.1007/s00468-025-02658-2
Ibitoyé Biah, Akomian F. Azihou, Sabin G. H. S. Guendehou, Brice Sinsin
{"title":"Influence of stem layer characteristics on biomass accumulation in forest ecosystems in Benin","authors":"Ibitoyé Biah,&nbsp;Akomian F. Azihou,&nbsp;Sabin G. H. S. Guendehou,&nbsp;Brice Sinsin","doi":"10.1007/s00468-025-02658-2","DOIUrl":"10.1007/s00468-025-02658-2","url":null,"abstract":"<div><p>Assessing carbon stocks in forest ecosystems is key to developing effective climate change mitigation strategies. However, the role of plant traits, particularly bark, sapwood, and heartwood, in biomass accumulation remains poorly understood. Clarifying these relationships can improve predictions of tropical forest carbon storage and management strategies. This study investigated the contributions of these stem layers to aboveground biomass in four vegetation types in Benin: semi-deciduous forest, gallery forest, swamp forest, and woodland. Data were collected using a non-destructive method; 470 trees across 25 species with diameters ranging from 5 to 77 cm were sampled from 111 plots. Multiple linear regressions and analysis of variance were performed to determine the contribution of each stem layer to aboveground biomass. The findings revealed significant variations in bark, sapwood, and heartwood characteristics across different vegetation types and among species. Woodland species presented the thickest bark (1.38 cm), whereas semi-deciduous forest species at seasonally flooded sites had the thinnest bark (0.80 cm). Bark and sapwood thickness were identified as key predictors of biomass accumulation (p &lt; 0.000 and adj R<sup>2</sup> between 53.04 and 76.39%). Lower bark mass density was generally observed in semi-deciduous forest, gallery forest, and woodland species than in sapwood and heartwood. Notably, <i>Daniellia oliveri</i> in woodland revealed an atypical pattern, with the bark mass density exceeding that of the inner wood layers. A consistent increase in wood mass density from the bark to the pith was observed in the swamp forest. These findings highlight the importance of incorporating bark and sapwood traits into tropical biomass models to enhance carbon stock estimates and guide more effective, ecosystem-specific forest management for climate change mitigation.</p></div>","PeriodicalId":805,"journal":{"name":"Trees","volume":"39 4","pages":""},"PeriodicalIF":2.1,"publicationDate":"2025-07-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145170493","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Intraspecific variations in relative growth rate and eco-physiological properties of Falcataria falcata (L.) Greuter & R.Rankin seedlings among Southeast Asian and Melanesian populations Falcataria falcata (L.)相对生长速率和生态生理特性的种内变化Greuter & R.Rankin幼苗在东南亚和美拉尼西亚种群中的分布
IF 2.1 3区 农林科学
Trees Pub Date : 2025-07-26 DOI: 10.1007/s00468-025-02652-8
Eny Faridah, Kiyosada Kawai, Arom Figyantika, Nesty Pratiwi Romadini, Tanaka Kenzo,  Sawitri, Daryono Prehaten,  Widiyatno, Mohammad Na’iem, Yoshihiko Tsumura, Naoki Tani
{"title":"Intraspecific variations in relative growth rate and eco-physiological properties of Falcataria falcata (L.) Greuter & R.Rankin seedlings among Southeast Asian and Melanesian populations","authors":"Eny Faridah,&nbsp;Kiyosada Kawai,&nbsp;Arom Figyantika,&nbsp;Nesty Pratiwi Romadini,&nbsp;Tanaka Kenzo,&nbsp; Sawitri,&nbsp;Daryono Prehaten,&nbsp; Widiyatno,&nbsp;Mohammad Na’iem,&nbsp;Yoshihiko Tsumura,&nbsp;Naoki Tani","doi":"10.1007/s00468-025-02652-8","DOIUrl":"10.1007/s00468-025-02652-8","url":null,"abstract":"<div><h3>Key message</h3><p><i>Falcataria falcata</i>, one of the fastest-growing trees, showed a distinctively high photosynthetic rate and leaf nitrogen content. These traits were linked to seedling relative growth rates among nine populations.</p><h3>Abstract</h3><p>The increased demand for lightweight wood products requires genetic improvements in the growth, wood properties, and stress tolerance of fast-growing timber species. <i>Falcataria falcata</i> (Leguminosae) is one of the fastest-growing trees worldwide and an important multipurpose plantation species. This species is distributed across various geological locations in Southeastern Asia and Melanesia; therefore, populations from different regions may show phenotypic variations. Herein, we investigated variations in relative growth rate (RGR) and 17 traits related to growth, photosynthesis, and stress tolerance using current-year seedlings from nine populations grown under common greenhouse conditions. We detected a threefold variation in RGR among populations, with those from North Maluku, Papua, and Solomon showing relatively higher RGR. In total, 10 out of 17 traits varied significantly, with pronounced variation in nitrogen (N)-use traits, such as root nodule fraction (16.8-fold) and leaf nitrogen content per unit area (2.7-fold). <i>F. falcata</i> exhibited remarkably high photosynthetic rate (<i>A</i><sub>area</sub>), leaf nitrogen concentration (N<sub>mass</sub>), and specific leaf area, reaching the maxima reported for woody broadleaf species. The RGR was positively associated with <i>A</i><sub>area</sub>, N<sub>mass</sub>, and leaf dark respiration rate among populations, but not with biomass allocation. These results suggest that <i>Falcataria falcata</i> contains wide phenotypic variations among geologically different populations and that leaf traits can be used as an index of seedling RGR. This information could aid in designing efficient breeding programs for this species.</p></div>","PeriodicalId":805,"journal":{"name":"Trees","volume":"39 4","pages":""},"PeriodicalIF":2.1,"publicationDate":"2025-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145170130","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complex planting histories of Pinus contorta subspecies and hybrids may help explain invasion success 扭曲松亚种和杂交种复杂的种植历史可能有助于解释入侵成功的原因
IF 2.1 3区 农林科学
Trees Pub Date : 2025-07-24 DOI: 10.1007/s00468-025-02657-3
Thomas F. Carlin, Matthew B. Scott, Carol A. Rolando, Thomas S. H. Paul
{"title":"Complex planting histories of Pinus contorta subspecies and hybrids may help explain invasion success","authors":"Thomas F. Carlin,&nbsp;Matthew B. Scott,&nbsp;Carol A. Rolando,&nbsp;Thomas S. H. Paul","doi":"10.1007/s00468-025-02657-3","DOIUrl":"10.1007/s00468-025-02657-3","url":null,"abstract":"<div><h3>Key message</h3><p>Success of invasive non-native conifers in New Zealand may be in part due to introduced hybrids or unintentional hybridisation post-introduction, resulting in unexpected traits that impact control success.</p><h3>Abstract</h3><p>Exotic conifers are amongst the most successful weeds in the Southern Hemisphere, in part due to their frequent introductions for commercial forestry and sustainable land use. Multiple introductions of many species, subspecies, and races can help overcome genetic bottlenecks and shape unique invasive populations. Populations of <i>Pinus contorta</i>, the most vigorously spreading conifer in New Zealand, were believed to be dominated by a single non-serotinous subspecies, largely due to its perceived faster spread rate. However, recent work has identified serotinous cones in <i>P. contorta</i> stands leading to confusion around the identity of populations. Here, we investigated the historical planting literature to determine which <i>P. contorta</i> subspecies were introduced across New Zealand to better understand which traits may be expected in invasive populations. We also consider the effect that cone serotiny, expressed by two of four subspecies, may have on control operations by comparing the viability of serotinous seed banks in treated and untreated areas. We find that all four subspecies of <i>P. contorta</i> were established almost ubiquitously across New Zealand. Therefore, we postulate that invasive populations are unlikely to represent any one subspecies and observed trait shifts could be due to intentionally introduced hybrids or unintentional intermixing between subspecies. Additionally, we note that serotinous cone banks persist within herbicide-treated populations with no effect on seed viability. Despite lessening initial spread rates, cone serotiny may become more common across New Zealand by allowing populations to reinvade after herbicide treatments and confer fitness benefits as wildfires become more common under climate change.</p></div>","PeriodicalId":805,"journal":{"name":"Trees","volume":"39 4","pages":""},"PeriodicalIF":2.1,"publicationDate":"2025-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s00468-025-02657-3.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145168242","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of nanoencapsulated nitric oxide donor on Cecropia pachystachya Trécul and Cariniana estrellensis (Raddi) Kuntze seedlings subjected to short and long-term water deficit 纳米囊化一氧化氮供体对短期和长期水分亏缺条件下青斑天蚕(Cecropia pachystachya tracimcul)和卡尼亚(Cariniana estrellensis, Raddi) Kuntze幼苗的影响
IF 2.1 3区 农林科学
Trees Pub Date : 2025-07-22 DOI: 10.1007/s00468-025-02656-4
Giovanna Camargo do Carmo, José Victor Soto de Mello, Ana Cristina Preisler, John David Oliveira de Lima, Roney Henrique Pereira, Joana Claudio Pieretti, Renata Stolf-Moreira, José Antonio Pimenta, Amedea Barozzi Seabra, Halley Caixeta Oliveira
{"title":"Effects of nanoencapsulated nitric oxide donor on Cecropia pachystachya Trécul and Cariniana estrellensis (Raddi) Kuntze seedlings subjected to short and long-term water deficit","authors":"Giovanna Camargo do Carmo,&nbsp;José Victor Soto de Mello,&nbsp;Ana Cristina Preisler,&nbsp;John David Oliveira de Lima,&nbsp;Roney Henrique Pereira,&nbsp;Joana Claudio Pieretti,&nbsp;Renata Stolf-Moreira,&nbsp;José Antonio Pimenta,&nbsp;Amedea Barozzi Seabra,&nbsp;Halley Caixeta Oliveira","doi":"10.1007/s00468-025-02656-4","DOIUrl":"10.1007/s00468-025-02656-4","url":null,"abstract":"<div><h3>Key Message</h3><p>Low-concentrations of nanoencapsulated NO donor protect tree seedlings from drought, enhancing photosynthesis, stomatal conductance, root hair growth, and stem water potential, but the effects are species-dependent.</p><h3>Abstract</h3><p>Nitric oxide (NO), a critical signaling molecule in plants, plays a protective role against water deficit (WD). However, its application is hindered by its relatively unstable chemical nature. To address this, researchers have explored the nanoencapsulation of NO donor molecules. The study aimed to evaluate the effects of treatments using chitosan nanoparticles (NPs) containing the NO donor S-nitrosoglutathione (GSNO) on neotropical tree seedlings (<i>Cecropia pachystachya</i> and <i>Cariniana estrellensis</i>) exposed to short and long-term WD in a greenhouse. Seedlings under long-term WD received nanoformulations in the substrate three times at ten-day intervals. Under short-term WD, seedlings were treated for three alternate days before initiating the WD. The treatment with NPs containing GSNO (50 µM) increased the stomatal conductance, photosynthetic rate, and plant water potential of <i>C. pachystachya</i> submitted to short and long-term WD, reaching levels similar to those of plants kept at field capacity. The same effects were not induced by free GSNO and NPs without NO. Under long-term WD, GSNO-loaded NPs also increased root and leaf biomass in comparison to other WD treatments and increased the amount and incidence of root hairs. In contrast, <i>Cariniana estrellensis</i> seedlings did not respond to the application of NPs containing GSNO at the tested concentrations (from 25 to 800 µM), in any WD condition. Results suggest that nanoencapsulated GSNO can protect <i>C. pachystachya</i> seedlings in both WD conditions, highlighting the potential for obtaining drought-tolerant tree seedlings in reforestation programs. However, this action is species-dependent, as no effect was induced in <i>C. estrellensis</i>.</p></div>","PeriodicalId":805,"journal":{"name":"Trees","volume":"39 4","pages":""},"PeriodicalIF":2.1,"publicationDate":"2025-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145167460","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Reproductive biology of Eremanthus incanus (Less.) Less., an endemic exploited Asteraceae from Brazil 鸢尾(Eremanthus incanus)的生殖生物学更少。巴西特有的一种被开发的菊科植物
IF 2.1 3区 农林科学
Trees Pub Date : 2025-07-20 DOI: 10.1007/s00468-025-02655-5
Luiz Filipe Maravilha, João Paulo Raimundo Borges, Elisa Jorge de Morais, Evandro Luiz Mendonça Machado, Leonardo Ré Jorge, André Rodrigo Rech, Miranda Titon
{"title":"Reproductive biology of Eremanthus incanus (Less.) Less., an endemic exploited Asteraceae from Brazil","authors":"Luiz Filipe Maravilha,&nbsp;João Paulo Raimundo Borges,&nbsp;Elisa Jorge de Morais,&nbsp;Evandro Luiz Mendonça Machado,&nbsp;Leonardo Ré Jorge,&nbsp;André Rodrigo Rech,&nbsp;Miranda Titon","doi":"10.1007/s00468-025-02655-5","DOIUrl":"10.1007/s00468-025-02655-5","url":null,"abstract":"<div><h3>Key message</h3><p><i>Eremanthus incanus</i> depends on outcrossing for reproduction, and the loss of pollinators can severely compromise the viability of populations of this species.</p><h3>Abstract</h3><p>Pollination biology is crucial for understanding the processes underlying the sexual reproduction of plants and the long-term sustainability of populations, especially in the face of increasing anthropogenic pressures. In this context, we aimed to investigate the reproductive and pollination system of <i>Eremanthus incanus</i>, an endemic species from Brazil, predominantly distributed in the <i>Campos Rupestres</i> of the Espinhaço Range and subjected to intense exploitation pressure. We selected 15 mother trees, on which we applied three pollination treatments: open pollination, non-pollination, and manual cross-pollination. When the fruits reached maturation, we collected the material to evaluate fecundity (number of seeds formed). Subsequently, we conducted experiments that included germination under laboratory conditions, seedling emergence, and initial sapling growth under nursery conditions. All pollination treatments resulted in high fecundity. However, the non-pollination treatment was unsuccessful in germination and seedling emergence, inferring the existence of a self-incompatibility mechanism in <i>E. incanus</i>. Open pollination and manual cross-pollination methods were not statistically different regarding sapling survival and initial growth. Although survival rate decreased over time, it remained consistently high, and the increase in sapling height and diameter was modest at each assessment, reflecting a slow growth strategy. We concluded that <i>E. incanus</i> is dependent on pollinators and does not face pollen limitation in the studied area. Furthermore, the observed variability among mother trees highlights the complexity of the species’ reproductive ecology, emphasizing the importance of considering intraspecific diversity in conservation strategies. </p></div>","PeriodicalId":805,"journal":{"name":"Trees","volume":"39 4","pages":""},"PeriodicalIF":2.1,"publicationDate":"2025-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145167625","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Testing the validity of the Montgomery–Koyama–Smith equation and the power law equation using 3231 tepals of a Magnolia species 用一种木兰的3231片花被片检验Montgomery-Koyama-Smith方程和幂律方程的有效性
IF 2.1 3区 农林科学
Trees Pub Date : 2025-07-16 DOI: 10.1007/s00468-025-02645-7
Linli Deng, Jinfeng Wang, Li Zhang, Dirk Hölscher, Peijian Shi
{"title":"Testing the validity of the Montgomery–Koyama–Smith equation and the power law equation using 3231 tepals of a Magnolia species","authors":"Linli Deng,&nbsp;Jinfeng Wang,&nbsp;Li Zhang,&nbsp;Dirk Hölscher,&nbsp;Peijian Shi","doi":"10.1007/s00468-025-02645-7","DOIUrl":"10.1007/s00468-025-02645-7","url":null,"abstract":"<div><h3>Key message</h3><p><b>The power-law equation provides marginally better accuracy than the Montgomery–Koyama–Smith equation for estimating total tepal area, with flexible definitions of maximum tepal length maintaining prediction reliability.</b></p><h3>Abstract</h3><p>Montgomery–Koyama–Smith equation (MKSE) and power law equation (PLE) were evaluated for estimating the total tepal area (<i>A</i><sub>T</sub>) of <i>Magnolia</i> × <i>soulangeana</i> flowers using 3231 tepals from 359 flowers. MKSE assumes an isometric relationship between the <i>A</i><sub>T</sub> and the product of summed tepal widths (<i>L</i><sub>KS</sub>) and maximum tepal length (<i>W</i><sub>KS</sub>), while PLE incorporates an allometric scaling exponent (α). Results showed α = 0.9561 (95% CI 0.9481–0.9641), confirming allometry. PLE exhibited slightly lower root-mean-square error (RMSE: 0.0149 vs. 0.0172) and mean absolute percentage error (MAPE: 1.18% vs. 1.35%) than MKSE. Redefining <i>W</i><sub>KS</sub> as a random selection from the largest 9, 6, or 3 tepal lengths per flower minimally affected model performance, with MAPE consistently below 5% even when sampling the entire length range. This flexibility simplifies field measurements without compromising accuracy. Variability in geometric series common ratios across flowers likely drives the observed allometric scaling. This study validates that <i>A</i><sub>T</sub> can be reliably estimated using summed widths and a flexibly defined maximum length, emphasizing PLE’s marginally superior fit. These findings advance methods for non-destructive floral trait quantification in species with fixed organ counts.</p></div>","PeriodicalId":805,"journal":{"name":"Trees","volume":"39 4","pages":""},"PeriodicalIF":2.1,"publicationDate":"2025-07-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s00468-025-02645-7.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145166007","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome-wide SSR marker discovery and population genetic analysis in Rhododendron campanulatum: a Himalayan tree line species 喜玛拉雅树系杜鹃花全基因组SSR标记的发现及群体遗传分析
IF 2.1 3区 农林科学
Trees Pub Date : 2025-07-15 DOI: 10.1007/s00468-025-02651-9
Rajendra K. Meena, Priyanka Kashyap, Ajay Sojitra, Payal Dhyani, Maneesh S. Bhandari, Shailesh Pandey, Santan Barthwal, Harish S. Ginwal
{"title":"Genome-wide SSR marker discovery and population genetic analysis in Rhododendron campanulatum: a Himalayan tree line species","authors":"Rajendra K. Meena,&nbsp;Priyanka Kashyap,&nbsp;Ajay Sojitra,&nbsp;Payal Dhyani,&nbsp;Maneesh S. Bhandari,&nbsp;Shailesh Pandey,&nbsp;Santan Barthwal,&nbsp;Harish S. Ginwal","doi":"10.1007/s00468-025-02651-9","DOIUrl":"10.1007/s00468-025-02651-9","url":null,"abstract":"<div><h3>Key message</h3><p>GSS is a rapid and cost-effective technique for identifying de novo SSRs in non-model plant species for their genetic analysis.</p><h3>Abstract</h3><p><i>Rhododendron campanulatum</i> is a tree line tree species occurring in the greater Himalayas at an altitude of 3000‒3600 m. The present study aims to generate novel genomic simple sequence repeats (SSRs) markers through a genome survey sequencing approach and investigate population-level genetic processes. A total of 91.18 million reads were generated through the Illumina protocol, and high-quality reads were assembled into 257,413 contigs with 39.60% GC content and contig N50 value 3596 bp. After scanning of genomic assembly, a total of 223,850 perfect SSRs, 10,026 cSSRs, 963,958 iSSRs and 67,332 VNTRs were identified. In perfect SSRs, di-nucleotide repeats were most abundant (43.80%), followed by mono-, tri-, tetra-, penta-, and hexa-nucleotide repeats, respectively. Afterwards, 30,715 primer pairs were designed, and a subset of 50 primers was tested for their amplification through polymerase chain reaction. As a result, 35 SSR loci were successfully amplified and 13 showed polymorphism, which were further utilized to characterize the seven natural populations of <i>R. campanulatum</i> of Uttarakhand Himalayas. Under this study, low genetic diversity (expected heterozygosity, He = 0.28; Allelic richness, Ar = 1.91) was recorded in the analysed populations, which primarily dominated by heterozygotic individuals (F<sub>IS</sub> = −0.268). Further, AMOVA revealed 83% variation within the populations and the remaining 17% between the populations, indicating a great genetic differentiation (F<sub>ST</sub> = 0.173). Due to high genetic divergence, STRUCTURE and cluster analysis revealed two prominent groups. The marker genetic information generated herein is novel and important for understanding the genetic processes and guiding its conservation programme. </p></div>","PeriodicalId":805,"journal":{"name":"Trees","volume":"39 4","pages":""},"PeriodicalIF":2.1,"publicationDate":"2025-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145165039","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Understanding the behavior of the Euterpe precatoria (Mart.) palm seeds subjected to conventional ex situ conservation methods 了解欧洲食肉动物(Mart.)棕榈种子在常规迁地保护方法下的行为
IF 2.1 3区 农林科学
Trees Pub Date : 2025-07-15 DOI: 10.1007/s00468-025-02649-3
Cheila Deisy Ferreira, Inaê Mariê de Araújo Silva Cardoso, Jéssica Cristina Barbosa Ferreira, Rennan Oliveira Meira, Frederico Henrique da Silva Costa, Jonny Everson Scherwinski-Pereira
{"title":"Understanding the behavior of the Euterpe precatoria (Mart.) palm seeds subjected to conventional ex situ conservation methods","authors":"Cheila Deisy Ferreira,&nbsp;Inaê Mariê de Araújo Silva Cardoso,&nbsp;Jéssica Cristina Barbosa Ferreira,&nbsp;Rennan Oliveira Meira,&nbsp;Frederico Henrique da Silva Costa,&nbsp;Jonny Everson Scherwinski-Pereira","doi":"10.1007/s00468-025-02649-3","DOIUrl":"10.1007/s00468-025-02649-3","url":null,"abstract":"<div><h3>Abstract</h3><p>The sustainable use of palm trees requires studies on various aspects of seed physiology, as seeds often serve as the primary means of natural propagation. This study aimed to evaluate the effects of desiccation and storage at different temperatures on the physiological quality of seeds and zygotic embryos of <i>Euterpe precatoria</i>. Seeds were artificially desiccated for seven periods (0, 24, 48, 96, 120, 168 and 216 h) and, after each period, were subjected to germination tests using both whole seeds and zygotic embryos. For conservation, pre-desiccated seeds and embryos with different water contents were stored under different conditions: − 196 ºC (liquid nitrogen), - 20 °C, 6 ºC, and 25 ºC for 30 days. Additionally, morphoanatomical and histochemical analyses of zygotic embryos from dried seeds were performed. <i>E. precatoria</i> seeds exhibited high sensitivity to desiccation, with critical germination and vigor thresholds observed at a water content of 16.9%. Water contents of 12.0 and 8.9% had lethal effects on germination, regardless of the germination method. The presence of phenolic compounds and vacuolated cells, identified through anatomical analysis, confirmed the species’ recalcitrant behavior and revealed physical damage in zygotic embryos with water contents below 8.9%. These findings indicate that <i>E. precatoria</i> seeds are desiccation-sensitive, and none of the tested storage temperatures effectively preserved their physiological quality. </p><h3>Key message</h3><p><i>Euterpe precatoria</i> seeds are highly sensitive to desiccation, with critical germination and vigor thresholds observed at a water content of 16.9%.</p></div>","PeriodicalId":805,"journal":{"name":"Trees","volume":"39 4","pages":""},"PeriodicalIF":2.1,"publicationDate":"2025-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145166236","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unveiling xylem structure with MicroCT and investigating hydraulic conductivity’s impact on leaf morphology and photosynthesis in Populus euphratica Oliv. 利用MicroCT揭示胡杨木质部结构,研究水力传导对胡杨叶片形态和光合作用的影响。
IF 2.1 3区 农林科学
Trees Pub Date : 2025-07-11 DOI: 10.1007/s00468-025-02644-8
Wenhai Li, Caixia Zheng, Zaixin Gong
{"title":"Unveiling xylem structure with MicroCT and investigating hydraulic conductivity’s impact on leaf morphology and photosynthesis in Populus euphratica Oliv.","authors":"Wenhai Li,&nbsp;Caixia Zheng,&nbsp;Zaixin Gong","doi":"10.1007/s00468-025-02644-8","DOIUrl":"10.1007/s00468-025-02644-8","url":null,"abstract":"<div><p><i>Populus euphratica</i> Oliv. is a poplar with heteromorphic leaves. Leaves in the upper part of the crown are mostly dentate oval, whereas those in the lower part of the crown or on saplings are mostly lanceolate. To further explore the reasons of <i>P. euphratica</i> at different heights exhibit different leaf shapes, here, the morphology and the anatomy of the upper and the lower branches and leaves were observed based on optical microscopy in the first. In addition, we have established a detection method for branch xylem based on micro-computed tomography (MicroCT) and we found that mean vessel diameter, mean vessel wall thickness, hydraulic diameter, and mean vessel density showed significant differences between upper and lower branches based on this method. Furthermore, hydraulic conductivity of upper branches was higher than that of lower branches so that water can be transported to the top of the canopy, and the photosynthesis rate of the upper leaves was higher than that of the lower leaves. Finally, we investigated there was a significant positive correlation between water use efficiency (WUE) of the upper leaves, the xylem vessel diameter, and the hydraulic diameter, whereas there was a significant negative correlation between the WUE and the vessel wall thickness. These results indicated that the water status of the branches and the leaves of <i>P. euphratica</i> may be one of the physiological mechanisms causing morphological differences in leaves, and this research provided a new method and insights into the further study of heterophylly in plants.</p></div>","PeriodicalId":805,"journal":{"name":"Trees","volume":"39 4","pages":""},"PeriodicalIF":2.1,"publicationDate":"2025-07-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145164716","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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