发布求助
文献互助 智能选刊 最新文献

Annual review of microbiology最新文献

筛选
英文 中文
Dickeya Diversity and Pathogenic Mechanisms. Dickeya 多样性和致病机制。
IF 8.5 1区 生物学
Annual review of microbiology Pub Date : 2024-11-01 DOI: 10.1146/annurev-micro-041222-012242
Jianuan Zhou, Ming Hu, Lianhui Zhang
{"title":"<i>Dickeya</i> Diversity and Pathogenic Mechanisms.","authors":"Jianuan Zhou, Ming Hu, Lianhui Zhang","doi":"10.1146/annurev-micro-041222-012242","DOIUrl":"10.1146/annurev-micro-041222-012242","url":null,"abstract":"<p><p>The <i>Dickeya</i> genus comprises numerous pathogenic species that cause diseases in various crops, vegetables, and ornamental plants across the globe. The pathogens have become very widespread in recent years, and numerous newly identified <i>Dickeya</i>-associated plant diseases have been reported, which poses an immense threat to agricultural production and is a serious concern internationally. Evidence is accumulating that a diversity of hosts, environmental habitats, and climates seems to shape the abundance of <i>Dickeya</i> species in nature and the differentiation of pathogenic mechanisms. This review summarizes the latest findings on the genome diversity and pathogenic mechanisms of <i>Dickeya</i> spp., with a focus on the intricate virulence regulatory mechanisms mediated by quorum sensing and pathogen-host interkingdom communication systems.</p>","PeriodicalId":7946,"journal":{"name":"Annual review of microbiology","volume":"78 1","pages":"621-642"},"PeriodicalIF":8.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142680634","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metals at the Host-Fungal Pathogen Battleground. 寄主-真菌病原体战场上的金属
IF 8.5 1区 生物学
Annual review of microbiology Pub Date : 2024-11-01 Epub Date: 2024-11-07 DOI: 10.1146/annurev-micro-041222-023745
Ritu Garg, Marika S David, Shuyi Yang, Valeria C Culotta
{"title":"Metals at the Host-Fungal Pathogen Battleground.","authors":"Ritu Garg, Marika S David, Shuyi Yang, Valeria C Culotta","doi":"10.1146/annurev-micro-041222-023745","DOIUrl":"10.1146/annurev-micro-041222-023745","url":null,"abstract":"<p><p>Fungal infections continue to represent a major threat to public health, particularly with the emergence of multidrug-resistant fungal pathogens. As part of the innate immune response, the host modulates the availability of metals as armament against pathogenic microbes, including fungi. The transition metals Fe, Cu, Zn, and Mn are essential micronutrients for all life forms, but when present in excess, these same metals are potent toxins. The host exploits the double-edged sword of these metals, and will either withhold metal micronutrients from pathogenic fungi or attack them with toxic doses. In response to these attacks, fungal pathogens cleverly adapt by modulating metal transport, metal storage, and usage of metals as cofactors for enzymes. Here we review the current state of understanding on Fe, Cu, Zn, and Mn at the host-fungal pathogen battleground and provide perspectives for future research, including a hope for new antifungals based on metals.</p>","PeriodicalId":7946,"journal":{"name":"Annual review of microbiology","volume":" ","pages":"23-38"},"PeriodicalIF":8.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12044431/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141086368","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cyanobacteriochromes: A Rainbow of Photoreceptors. 蓝藻色素：光感受器的彩虹
IF 8.5 1区 生物学
Annual review of microbiology Pub Date : 2024-11-01 Epub Date: 2024-11-07 DOI: 10.1146/annurev-micro-041522-094613
Nathan C Rockwell, J Clark Lagarias
{"title":"Cyanobacteriochromes: A Rainbow of Photoreceptors.","authors":"Nathan C Rockwell, J Clark Lagarias","doi":"10.1146/annurev-micro-041522-094613","DOIUrl":"10.1146/annurev-micro-041522-094613","url":null,"abstract":"<p><p>Widespread phytochrome photoreceptors use photoisomerization of linear tetrapyrrole (bilin) chromophores to measure the ratio of red to far-red light. Cyanobacteria also contain distantly related cyanobacteriochrome (CBCR) proteins that share the bilin-binding GAF domain of phytochromes but sense other colors of light. CBCR photocycles are extremely diverse, ranging from the near-UV to the near-IR. Photoisomerization of the bilin triggers photoconversion of the CBCR input, thereby modulating the biochemical signaling state of output domains such as histidine kinase bidomains that can interface with cellular signal transduction pathways. CBCRs thus can regulate several aspects of cyanobacterial photobiology, including phototaxis, metabolism of cyclic nucleotide second messengers, and optimization of the cyanobacterial light-harvesting apparatus. This review examines spectral tuning, photoconversion, and photobiology of CBCRs and recent developments in understanding their evolution and in applying them in synthetic biology.</p>","PeriodicalId":7946,"journal":{"name":"Annual review of microbiology","volume":" ","pages":"61-81"},"PeriodicalIF":8.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11578781/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141287662","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Understanding the Diversity, Evolution, Ecology, and Applications of Mycoviruses. 了解霉菌病毒的多样性、进化、生态和应用。
IF 8.5 1区 生物学
Annual review of microbiology Pub Date : 2024-11-01 Epub Date: 2024-11-07 DOI: 10.1146/annurev-micro-041522-105358
Jiatao Xie, Daohong Jiang
{"title":"Understanding the Diversity, Evolution, Ecology, and Applications of Mycoviruses.","authors":"Jiatao Xie, Daohong Jiang","doi":"10.1146/annurev-micro-041522-105358","DOIUrl":"10.1146/annurev-micro-041522-105358","url":null,"abstract":"<p><p>Mycoviruses are widely distributed among various kinds of fungi. Over the past 10 years, more novel mycoviruses have been discovered with the use of high-throughput sequencing techniques, and research on mycoviruses has made fantastic progress, promoting our understanding of the diversity, classification, evolution, and ecology of the entire virosphere. Mycoviruses affect the biological and ecological functions of their hosts, for example, by suppressing or improving hosts' virulence and reproduction ability, and subsequently affect the microbiological community where their hosts live; hence, we may develop mycoviruses to regulate the health of environments, plants, animals, and human beings. In this review, we introduce recently discovered mycoviruses from fungi of humans, animals, plants, and environments, and their diversity, evolution, and ecological characteristics. We also present the potential application of mycoviruses by describing the latest progress on using mycoviruses to control plant diseases. Finally, we discuss the main issues facing mycovirus research in the future.</p>","PeriodicalId":7946,"journal":{"name":"Annual review of microbiology","volume":" ","pages":"595-620"},"PeriodicalIF":8.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142339477","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Large Roles of Small Proteins. 小蛋白质的大作用
IF 8.5 1区 生物学
Annual review of microbiology Pub Date : 2024-11-01 Epub Date: 2024-11-07 DOI: 10.1146/annurev-micro-112723-083001
Aisha T Burton, Rilee Zeinert, Gisela Storz
{"title":"Large Roles of Small Proteins.","authors":"Aisha T Burton, Rilee Zeinert, Gisela Storz","doi":"10.1146/annurev-micro-112723-083001","DOIUrl":"10.1146/annurev-micro-112723-083001","url":null,"abstract":"<p><p>Bacterial proteins of ≤50 amino acids, denoted small proteins or microproteins, have been traditionally understudied and overlooked, as standard computational, biochemical, and genetic approaches often do not detect proteins of this size. However, with the realization that small proteins are stably expressed and have important cellular roles, there has been increased identification of small proteins in bacteria and eukaryotes. Gradually, the functions of a few of these small proteins are being elucidated. Many interact with larger protein products to modulate their subcellular localization, stabilities, or activities. Here, we provide an overview of these diverse functions in bacteria, highlighting generalities among bacterial small proteins and similarly sized proteins in eukaryotic organisms and discussing questions for future research.</p>","PeriodicalId":7946,"journal":{"name":"Annual review of microbiology","volume":" ","pages":"1-22"},"PeriodicalIF":8.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12005717/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141074622","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Biogenesis and Functionality of Sortase-Assembled Pili in Gram-Positive Bacteria. 革兰氏阳性细菌中分选酶组装的纤毛虫的生物生成和功能。
IF 8.5 1区 生物学
Annual review of microbiology Pub Date : 2024-11-01 Epub Date: 2024-11-07 DOI: 10.1146/annurev-micro-112123-100908
Chungyu Chang, Nicholas A Ramirez, Aadil H Bhat, Minh T Nguyen, Poonam Kumari, HyLam Ton-That, Asis Das, Hung Ton-That
{"title":"Biogenesis and Functionality of Sortase-Assembled Pili in Gram-Positive Bacteria.","authors":"Chungyu Chang, Nicholas A Ramirez, Aadil H Bhat, Minh T Nguyen, Poonam Kumari, HyLam Ton-That, Asis Das, Hung Ton-That","doi":"10.1146/annurev-micro-112123-100908","DOIUrl":"10.1146/annurev-micro-112123-100908","url":null,"abstract":"<p><p>A unique class of multimeric proteins made of covalently linked subunits known as pili, or fimbriae, are assembled and displayed on the gram-positive bacterial cell surface by a conserved transpeptidase enzyme named pilus-specific sortase. Sortase-assembled pili are produced by a wide range of gram-positive commensal and pathogenic bacteria inhabiting diverse niches such as the human oral cavity, gut, urogenital tract, and skin. These surface appendages serve many functions, including as molecular adhesins, immuno-modulators, and virulence determinants, that significantly contribute to both the commensal and pathogenic attributes of producer microbes. Intensive genetic, biochemical, physiological, and structural studies have been devoted to unveiling the assembly mechanism and functions, as well as the utility of these proteins in vaccine development and other biotechnological applications. We provide a comprehensive review of these topics and discuss the current status and future prospects of the field.</p>","PeriodicalId":7946,"journal":{"name":"Annual review of microbiology","volume":" ","pages":"403-423"},"PeriodicalIF":8.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141981540","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Introduction. 介绍。
IF 8.5 1区 生物学
Annual review of microbiology Pub Date : 2024-11-01 DOI: 10.1146/annurev-mi-78-100324-100001
Susan Gottesman
{"title":"Introduction.","authors":"Susan Gottesman","doi":"10.1146/annurev-mi-78-100324-100001","DOIUrl":"https://doi.org/10.1146/annurev-mi-78-100324-100001","url":null,"abstract":"","PeriodicalId":7946,"journal":{"name":"Annual review of microbiology","volume":"78 1","pages":"v"},"PeriodicalIF":8.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142680637","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Periplasmic Chaperones: Outer Membrane Biogenesis and Envelope Stress. 外膜伴侣蛋白：外膜生物生成与包膜压力
IF 8.5 1区 生物学
Annual review of microbiology Pub Date : 2024-11-01 Epub Date: 2024-11-07 DOI: 10.1146/annurev-micro-041522-102901
Ashton N Combs, Thomas J Silhavy
{"title":"Periplasmic Chaperones: Outer Membrane Biogenesis and Envelope Stress.","authors":"Ashton N Combs, Thomas J Silhavy","doi":"10.1146/annurev-micro-041522-102901","DOIUrl":"10.1146/annurev-micro-041522-102901","url":null,"abstract":"<p><p>Envelope biogenesis and homeostasis in gram-negative bacteria are exceptionally intricate processes that require a multitude of periplasmic chaperones to ensure cellular survival. Remarkably, these chaperones perform diverse yet specialized functions entirely in the absence of external energy such as ATP, and as such have evolved sophisticated mechanisms by which their activities are regulated. In this article, we provide an overview of the predominant periplasmic chaperones that enable efficient outer membrane biogenesis and envelope homeostasis in <i>Escherichia coli</i>. We also discuss stress responses that act to combat unfolded protein stress within the cell envelope, highlighting the periplasmic chaperones involved and the mechanisms by which envelope homeostasis is restored.</p>","PeriodicalId":7946,"journal":{"name":"Annual review of microbiology","volume":" ","pages":"191-211"},"PeriodicalIF":8.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12107694/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141619112","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Nucleotide Immune Signaling in CBASS, Pycsar, Thoeris, and CRISPR Antiphage Defense. CBASS、Pycsar、Thoeris 和 CRISPR 反虹吸防御中的核苷酸免疫信号转导。
IF 8.5 1区 生物学
Annual review of microbiology Pub Date : 2024-11-01 Epub Date: 2024-11-07 DOI: 10.1146/annurev-micro-041222-024843
Samuel J Hobbs, Philip J Kranzusch
{"title":"Nucleotide Immune Signaling in CBASS, Pycsar, Thoeris, and CRISPR Antiphage Defense.","authors":"Samuel J Hobbs, Philip J Kranzusch","doi":"10.1146/annurev-micro-041222-024843","DOIUrl":"10.1146/annurev-micro-041222-024843","url":null,"abstract":"<p><p>Bacteria encode an arsenal of diverse systems that defend against phage infection. A common theme uniting many prevalent antiphage defense systems is the use of specialized nucleotide signals that function as second messengers to activate downstream effector proteins and inhibit viral propagation. In this article, we review the molecular mechanisms controlling nucleotide immune signaling in four major families of antiphage defense systems: CBASS, Pycsar, Thoeris, and type III CRISPR immunity. Analyses of the individual steps connecting phage detection, nucleotide signal synthesis, and downstream effector function reveal shared core principles of signaling and uncover system-specific strategies used to augment immune defense. We compare recently discovered mechanisms used by phages to evade nucleotide immune signaling and highlight convergent strategies that shape host-virus interactions. Finally, we explain how the evolutionary connection between bacterial antiphage defense and eukaryotic antiviral immunity defines fundamental rules that govern nucleotide-based immunity across all kingdoms of life.</p>","PeriodicalId":7946,"journal":{"name":"Annual review of microbiology","volume":" ","pages":"255-276"},"PeriodicalIF":8.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141858874","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
From Petri Dishes to Patients to Populations: Scales and Evolutionary Mechanisms Driving Antibiotic Resistance. 从培养皿到病人再到群体：驱动抗生素耐药性的规模和进化机制。
IF 8.5 1区 生物学
Annual review of microbiology Pub Date : 2024-11-01 Epub Date: 2024-11-07 DOI: 10.1146/annurev-micro-041522-102707
Célia Souque, Indra González Ojeda, Michael Baym
{"title":"From Petri Dishes to Patients to Populations: Scales and Evolutionary Mechanisms Driving Antibiotic Resistance.","authors":"Célia Souque, Indra González Ojeda, Michael Baym","doi":"10.1146/annurev-micro-041522-102707","DOIUrl":"10.1146/annurev-micro-041522-102707","url":null,"abstract":"<p><p>Tackling the challenge created by antibiotic resistance requires understanding the mechanisms behind its evolution. Like any evolutionary process, the evolution of antimicrobial resistance (AMR) is driven by the underlying variation in a bacterial population and the selective pressures acting upon it. Importantly, both selection and variation will depend on the scale at which resistance evolution is considered (from evolution within a single patient to the host population level). While laboratory experiments have generated fundamental insights into the mechanisms underlying antibiotic resistance evolution, the technological advances in whole genome sequencing now allow us to probe antibiotic resistance evolution beyond the lab and directly record it in individual patients and host populations. Here we review the evolutionary forces driving antibiotic resistance at each of these scales, highlight gaps in our current understanding of AMR evolution, and discuss future steps toward evolution-guided interventions.</p>","PeriodicalId":7946,"journal":{"name":"Annual review of microbiology","volume":" ","pages":"361-382"},"PeriodicalIF":8.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141981541","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
首页 上一页 下一页 尾页
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整，为了账户安全，请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
请完成安全验证×
相关产品
×
本文献相关产品
联系我们：info@booksci.cn Book学术提供免费学术资源搜索服务，方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号：604180095
Book学术官方微信