{"title":"Clinal variation in quantitative traits but not in evolutionary potential along elevational and latitudinal gradients in the widespread Anthyllis vulneraria","authors":"Laura Daco, Guy Colling, Diethart Matthies","doi":"10.1002/ajb2.16360","DOIUrl":"10.1002/ajb2.16360","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Strong elevational and latitudinal gradients allow the study of genetic differentiation in response to similar environmental changes. However, it is uncertain whether the environmental changes along the two types of gradients result in similar genetically based changes in quantitative traits. Peripheral arctic and alpine populations are thought to have less evolutionary potential than more central populations do.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We studied quantitative traits of the widespread <i>Anthyllis vulneraria</i> in a common garden. Plants originated from 20 populations along a 2000-m elevational gradient from the lowlands to the elevational limit of the species in the Alps, and from 20 populations along a 2400-km latitudinal gradient from the center of the distribution of the species in Central Europe to its northern distributional margin.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Most traits showed similar clinal variations with elevation and latitude of origin, and the magnitude of all measured traits in relation to mean annual temperature was similar. Higher <i>Q</i><sub>ST</sub> values than <i>F</i><sub>ST</sub> values in several traits indicated diversifying selection, but for others <i>Q</i><sub>ST</sub> was smaller than <i>F</i><sub>ST</sub>. Genetic diversity of quantitative traits and neutral molecular markers was not correlated. Plasticity in response to favorable conditions declined with elevation and less strongly with latitude of origin, but the evolvability of traits did not.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>The clinal variation suggests adaptive differentiation of quantitative traits along the two gradients. The evolutionary potential of peripheral populations is not necessarily reduced, but lower plasticity may threaten their survival under rapidly changing climatic conditions.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-06-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ajb2.16360","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141417232","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Corrigendum to “The tiny drivers behind plant ecology and evolution”","authors":"","doi":"10.1002/ajb2.16358","DOIUrl":"10.1002/ajb2.16358","url":null,"abstract":"<p>Lau, J. A, and L. G. Bolin. 2024. The tiny drivers behind plant ecology and evolution. <i>American Journal of Botany</i> e16234. https://doi.org/10.1002/ajb2.16324</p><p>Our original schematic in Figure 1, which described the processes discussed in our article, included a drawing of an epiphytic orchid. Such a plant would not typically grow in soils and would not have the root structure illustrated in the figure. Accordingly, we have replaced the aboveground plant drawing with a more appropriate taxon.</p><p>We apologize for this error.</p>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-06-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ajb2.16358","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141309354","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Eric R. Hagen, Thais Vasconcelos, James D. Boyko, Jeremy M. Beaulieu
{"title":"Investigating historical drivers of latitudinal gradients in polyploid plant biogeography: A multiclade perspective","authors":"Eric R. Hagen, Thais Vasconcelos, James D. Boyko, Jeremy M. Beaulieu","doi":"10.1002/ajb2.16356","DOIUrl":"10.1002/ajb2.16356","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>The proportion of polyploid plants in a community increases with latitude, and different hypotheses have been proposed about which factors drive this pattern. Here, we aimed to understand the historical causes of the latitudinal polyploidy gradient using a combination of ancestral state reconstruction methods. Specifically, we assessed whether (1) polyploidization enables movement to higher latitudes (i.e., polyploidization precedes occurrences in higher latitudes) or (2) higher latitudes facilitate polyploidization (i.e., occurrence in higher latitudes precedes polyploidization).</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We reconstructed the ploidy states and ancestral niches of 1032 angiosperm species at four paleoclimatic time slices ranging from 3.3 million years ago to the present, comprising taxa from four well-represented clades: Onagraceae, Primulaceae, <i>Solanum</i> (Solanaceae), and Pooideae (Poaceae). We used ancestral niche reconstruction models alongside a customized discrete character evolution model to allow reconstruction of states at specific time slices. Patterns of latitudinal movement were reconstructed and compared in relation to inferred ploidy shifts.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>No single hypothesis applied equally well across all analyzed clades. While significant differences in median latitudinal occurrence were detected in the largest clade, Poaceae, no significant differences were detected in latitudinal movement in any clade.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Our preliminary study is the first to attempt to connect ploidy changes to continuous latitudinal movement, but we cannot favor one hypothesis over another. Given that patterns seem to be clade-specific, more clades must be analyzed in future studies for generalities to be drawn.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-06-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ajb2.16356","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141309355","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Corrigendum to “Patterns of leaf trait variation underlie ecological differences among sympatric tree species of Damburneya in a tropical rainforest”","authors":"","doi":"10.1002/ajb2.16359","DOIUrl":"10.1002/ajb2.16359","url":null,"abstract":"<p>Giraldo-Kalil, L. J., J. Campo, H. Paz, and J. Núñez-Farfán. 2022. Patterns of leaf trait variation underlie ecological differences among sympatric tree species of <i>Damburneya</i> in a tropical rainforest. <i>American Journal of Botany</i> 109(9): 1394–1409. https://doi.org/10.1002/ajb2.16056</p><p>In the Supporting Information of our article, we accidentally included the table of Appendix S6 twice and omitted the table of Appendix S5. The complete supporting information is now available.</p><p>We have taken this opportunity to correct two typing errors in the Materials and Methods section. In the description of the study site, the “San Martín Tuxtla volcano” was incompletely written as “San Martín volcano.”</p><p>In the same paragraph, we described that temperature reduces with increasing elevations; however, when we provided further detail in parentheses, we mistakenly assigned temperature ranges to their corresponding elevations by writing 1100 m a.s.l. when referring to 100 m a.s.l., and vice versa. This should have read: “With increasing altitude, the mean annual temperature decreases (from 23–24°C at 100 m a.s.l. to 20–21°C at 1100 m a.s.l.).”</p><p>We apologize for these errors–The Authors.</p>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ajb2.16359","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141305224","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Arthur F. Boom, Jérémy Migliore, Dario I. Ojeda Alayon, Esra Kaymak, Olivier J. Hardy
{"title":"Phylogenomics of Brachystegia: Insights into the origin of African miombo woodlands","authors":"Arthur F. Boom, Jérémy Migliore, Dario I. Ojeda Alayon, Esra Kaymak, Olivier J. Hardy","doi":"10.1002/ajb2.16352","DOIUrl":"10.1002/ajb2.16352","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Phylogenetic approaches can provide valuable insights on how and when a biome emerged and developed using its structuring species. In this context, <i>Brachystegia</i> Benth, a dominant genus of trees in miombo woodlands, appears as a key witness of the history of the largest woodland and savanna biome of Africa.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We reconstructed the evolutionary history of the genus using targeted-enrichment sequencing on 60 <i>Brachystegia</i> specimens for a nearly complete species sampling. Phylogenomic inferences used supermatrix (RAxML-NG) and summary-method (ASTRAL-III) approaches. Conflicts between species and gene trees were assessed, and the phylogeny was time-calibrated in BEAST. Introgression between species was explored using Phylonet.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>The phylogenies were globally congruent regardless of the method used. Most of the species were recovered as monophyletic, unlike previous plastid phylogenetic reconstructions where lineages were shared among geographically close individuals independently of species identity. Still, most of the individual gene trees had low levels of phylogenetic information and, when informative, were mostly in conflict with the reconstructed species trees. These results suggest incomplete lineage sorting and/or reticulate evolution, which was supported by network analyses. The BEAST analysis supported a Pliocene origin for current <i>Brachystegia</i> lineages, with most of the diversification events dated to the Pliocene-Pleistocene.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>These results suggest a recent origin of species of the miombo, congruently with their spatial expansion documented from plastid data. <i>Brachystegia</i> species appear to behave potentially as a syngameon, a group of interfertile but still relatively well-delineated species, an aspect that deserves further investigations.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141295392","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Insect herbivory on woody broadleaf seedlings along a subtropical elevational gradient supports the resource concentration hypothesis","authors":"Xiaoran Wang, Lin Chen, Hongwei Zhang, Pengcheng Liu, Xiaofan Shang, Fang Wang, Zhaochen Zhang, Jingchao Zhao, Mufan Sun, Junhong Chen, Jian Zhang","doi":"10.1002/ajb2.16355","DOIUrl":"10.1002/ajb2.16355","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Theories of plant–herbivore interactions hold that seedlings are more vulnerable to herbivory in warmer and more stable climates at lower elevations. Hypotheses of plant apparency, resource concentration, and resource availability have been proposed to explain variability in leaf herbivory. However, seasonal differences in the effects of these hypotheses on leaf herbivory on seedlings remain unclear.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We evaluated the three herbivory hypotheses by comparing the percentage and frequency of leaf herbivory in understory broadleaf seedlings in a subtropical forest in May (spring) and October (autumn) along an elevational gradient (290–1370 m a.s.l.). In total, we measured 2890 leaves across 696 seedlings belonging to 95 species and used beta regressions to test the effects of plant apparency (e.g., leaf area, seedling height), resource concentration (e.g., plant species diversity), and resource availability (e.g., canopy openness, soil available N and P) on leaf herbivory.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Seedlings exhibited unimodal patterns of leaf herbivory along elevation, with drivers of leaf herbivory varying by the month. Variation in the frequency of leaf herbivory was best explained by the resource concentration hypothesis (e.g., plant species diversity) in both months, and herbivory was lower on seedlings in sites with higher plant diversity. Plant apparency hypothesis (e.g., leaf area, seedling height) was weakly supported only in spring, and the evidence for resource availability hypothesis (e.g., canopy openness, soil nutrients) was mixed.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>This study supports the resource concentration hypothesis and reveals the importance of seasonal difference on understanding leaf herbivory patterns and the drivers of plant diversity in subtropical forests.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-06-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141237101","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Evolutionary patterns of variations in chromosome counts and genome sizes show positive correlations with taxonomic diversity in tropical gingers","authors":"Aleena Xavier, Ritu Yadav, Vinita Gowda","doi":"10.1002/ajb2.16334","DOIUrl":"10.1002/ajb2.16334","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Cytogenetic traits such as an organism's chromosome number and genome size are taxonomically critical as they are instrumental in defining angiosperm diversity. Variations in these traits can be traced to evolutionary processes such as polyploidization, although geographic variations across cytogenetic traits remain underexplored. In the pantropical monocot family Zingiberaceae (~1500 species), cytogenetic traits have been well documented; however, the role of these traits in shaping taxonomic diversity and biogeographic patterns of gingers is not known.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>A time-calibrated Bayesian phylogenetic tree was constructed for 290 taxa covering three of the four subfamilies in Zingiberaceae. We tested models of chromosome number and genome size evolution within the family and whether lineage age, taxonomic diversity, and distributional range explain the variations in the cytogenetic traits. Tests were carried out at two taxonomic ranks: within Zingiberaceae and within genus <i>Hedychium</i> using correlations, generalized linear models and phylogenetic least square models.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>The most frequent changes in chromosome number within Zingiberaceae were noted to be demi-polyploidization and polyploidization (~57% of the time), followed by ascending dysploidy (~27%). The subfamily Zingiberoideae showed descending dysploidy at its base, while Alpinioideae showed polyploidization at its internal nodes. Although chromosome counts and genome sizes did not corroborate with each other, suggesting that they are not equivalent; higher chromosome number variations and higher genome size variations were associated with higher taxonomic diversity and wider biogeographic distribution.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Within Zingiberaceae, multiple incidences of polyploidization were discovered, and cytogenetic events appear to have reduced the genome sizes and increased taxonomic diversity, distributional ranges and invasiveness.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141198966","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Keyi Feng, Joseph F. Walker, Hannah E. Marx, Ya Yang, Samuel F. Brockington, Michael J. Moore, Richard K. Rabeler, Stephen A. Smith
{"title":"The link between ancient whole-genome duplications and cold adaptations in the Caryophyllaceae","authors":"Keyi Feng, Joseph F. Walker, Hannah E. Marx, Ya Yang, Samuel F. Brockington, Michael J. Moore, Richard K. Rabeler, Stephen A. Smith","doi":"10.1002/ajb2.16350","DOIUrl":"10.1002/ajb2.16350","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>The Caryophyllaceae (the carnation family) have undergone multiple transitions into colder climates and convergence on cushion plant adaptation, indicating that they may provide a natural system for cold adaptation research. Previous research has suggested that putative ancient whole-genome duplications (WGDs) are correlated with niche shifts into colder climates across the Caryophyllales. Here, we explored the genomic changes potentially involved in one of these discovered shifts in the Caryophyllaceae.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We constructed a data set combining 26 newly generated transcriptomes with 45 published transcriptomes, including 11 cushion plant species across seven genera. With this data set, we inferred a dated phylogeny for the Caryophyllaceae and mapped ancient WGDs and gene duplications onto the phylogeny. We also examined functional groups enriched for gene duplications related to the climatic shift.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>The ASTRAL topology was mostly congruent with the current consensus of relationships within the family. We inferred 15 putative ancient WGDs in the family, including eight that have not been previously published. The oldest ancient WGD (ca. 64.4–56.7 million years ago), WGD1, was found to be associated with a shift into colder climates by previous research. Gene regions associated with ubiquitination were overrepresented in gene duplications retained after WGD1 and those convergently retained by cushion plants in <i>Colobanthus</i> and <i>Eremogone</i>, along with other functional annotations.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Gene family expansions induced by ancient WGDs may have contributed to the shifts to cold climatic niches in the Caryophyllaceae. Transcriptomic data are crucial resources that help unravel heterogeneity in deep-time evolutionary patterns in plants.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ajb2.16350","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141198973","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Utilizing a comparative approach to assess genome evolution during diploidization in Artemisia tridentata, a keystone species of western North America","authors":"Anthony E. Melton, Stephen J. Novak, Sven Buerki","doi":"10.1002/ajb2.16353","DOIUrl":"10.1002/ajb2.16353","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>Polyploidization is often followed by diploidization. Diploidization is generally studied using synthetic polyploid lines and/or crop plants, but rarely using extant diploids or nonmodel plants such as <i>Artemisia tridentata</i>. This threatened western North American keystone species has a large genome compared to congeneric <i>Artemisia</i> species; dominated by diploid and tetraploid cytotypes, with multiple origins of tetraploids with genome size reduction.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>The genome of an <i>A. tridentata</i> sample was resequenced to study genome evolution and compared to that of <i>A. annua</i>, a diploid congener. Three diploid genomes of <i>A. tridentata</i> were compared to test for multiple diploidization events.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>The <i>A. tridentata</i> genome had many chromosomal rearrangements relative to that of <i>A. annua</i>, while large-scale synteny of <i>A. tridentata</i> chromosome 3 and <i>A. annua</i> chromosome 4 was conserved. The three <i>A. tridentata</i> genomes had similar sizes (4.19–4.2 Gbp), heterozygosity (2.24–2.25%), and sequence (98.73–99.15% similarity) across scaffolds, and in <i>k</i>-mer analyses, similar patterns of diploid heterozygous <i>k</i>-mers (AB = 41%, 47%, and 47%), triploid heterozygous <i>k</i>-mers (AAB = 18–21%), and tetraploid <i>k</i>-mers (AABB = 13–17%). Biallelic SNPs were evenly distributed across scaffolds for all individuals. Comparisons of transposable element (TE) content revealed differential enrichment of TE clades.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Our findings suggest population-level TE differentiation after a shared polyploidization-to-diploidization event(s) and exemplify the complex processes of genome evolution. This research approached provides new resources for exploration of abiotic stress response, especially the roles of TEs in response pathways.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141198982","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Support for Baker's law: Facultative self-fertilization ability decreases pollen limitation in experimental colonization","authors":"Hanna Makowski, Keric Lamb, Laura F. Galloway","doi":"10.1002/ajb2.16351","DOIUrl":"10.1002/ajb2.16351","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Premise</h3>\u0000 \u0000 <p>The ability to self-fertilize is predicted to provide an advantage in colonization because a single individual can reproduce and establish a next generation in a new location regardless of the density of mates. While there is theoretical and correlative support for this idea, the strength of mate limitation as a selective agent has not yet been delineated from other factors that can also select for self-fertilization in colonization of new habitats. We used known mating-system variation in the American bellflower (<i>Campanula americana</i>) to explore how plants’ ability to self-fertilize can mitigate density-dependent reproduction and impact colonization success.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We created experimental populations of single individuals or a small number of plants to emulate isolated colonization events. These populations were composed of plants that differed in their ability to self-fertilize. We compared pollen limitation of the single individuals to that of small populations.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Experimental populations of plants that readily self-fertilize produced consistent seed numbers regardless of population size, whereas plants with lower ability to self-fertilize had density-dependent reproduction with greater seed production in small populations than in populations composed of a single individual.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>We experimentally isolated the effect of mate limitation in colonization and found that it can select for increased self-fertilization. We show the benefit of self-fertilization in colonization, which helps to explain geographic patterns of self-fertilization and shows support for Baker's law, a long-held hypothesis in the field of mating-system evolution.</p>\u0000 </section>\u0000 </div>","PeriodicalId":7691,"journal":{"name":"American Journal of Botany","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-05-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ajb2.16351","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141174097","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}