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Transcripts derived from the neocortical enhancer of Ctnnb1 promote the enhancer-promoter interaction and maintain Ctnnb1 transcription 源自 Ctnnb1 新皮质增强子的转录本促进增强子与启动子之间的相互作用并维持 Ctnnb1 的转录
Cell insight Pub Date : 2025-02-01 Epub Date: 2024-10-11 DOI: 10.1016/j.cellin.2024.100212
Chen Zhao , Liang Wang , Junbao Wang, Kuan Tian, Xiaojiao Hua, Fangyu Wang, Yan Zhou
{"title":"Transcripts derived from the neocortical enhancer of Ctnnb1 promote the enhancer-promoter interaction and maintain Ctnnb1 transcription","authors":"Chen Zhao , Liang Wang , Junbao Wang, Kuan Tian, Xiaojiao Hua, Fangyu Wang, Yan Zhou","doi":"10.1016/j.cellin.2024.100212","DOIUrl":"10.1016/j.cellin.2024.100212","url":null,"abstract":"","PeriodicalId":72541,"journal":{"name":"Cell insight","volume":"4 1","pages":"Article 100212"},"PeriodicalIF":0.0,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142651970","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
APC orchestrates microtubule dynamics by acting as a positive regulator of KIF2A and a negative regulator of CLASPs APC 通过充当 KIF2A 的正调控因子和 CLASPs 的负调控因子来协调微管动力学
Cell insight Pub Date : 2025-02-01 Epub Date: 2024-10-11 DOI: 10.1016/j.cellin.2024.100210
Yong Wang , Xinping Liu , Zheng Liu , Shasha Hua , Kai Jiang
{"title":"APC orchestrates microtubule dynamics by acting as a positive regulator of KIF2A and a negative regulator of CLASPs","authors":"Yong Wang ,&nbsp;Xinping Liu ,&nbsp;Zheng Liu ,&nbsp;Shasha Hua ,&nbsp;Kai Jiang","doi":"10.1016/j.cellin.2024.100210","DOIUrl":"10.1016/j.cellin.2024.100210","url":null,"abstract":"<div><div>Tumor suppressor protein Adenomatous polyposis coli protein (APC) is an EB-binding and microtubule (MT) plus end-tracking protein; however, how exactly APC regulates MT dynamics remains elusive. Here, we show that in LLC-PK1 cells, APC and KIF2A, an MT depolymerase, form a complex clustering at the cell edge and destabilize MTs at the MT plus ends. Further biochemical characterization and mutational analysis reveal key residues for the APC-KIF2A interaction. In addition, APC counteracts the major MT-stabilizer CLASPs at MT plus ends and promotes directional cell migration via modulating cell adhesion force. Reconstitution experiments demonstrate that APC potentiates KIF2A-induced MT catastrophes and antagonizes the stabilizing effect of CLASP2 <em>in vitro</em>. In summary, APC functions as a positive regulator of MT-destabilizer and a negative regulator of MT-stabilizer to orchestrate MT dynamics.</div></div>","PeriodicalId":72541,"journal":{"name":"Cell insight","volume":"4 1","pages":"Article 100210"},"PeriodicalIF":0.0,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142704837","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cover 封面
Cell insight Pub Date : 2025-02-01 Epub Date: 2025-01-29 DOI: 10.1016/S2772-8927(25)00004-5
{"title":"Cover","authors":"","doi":"10.1016/S2772-8927(25)00004-5","DOIUrl":"10.1016/S2772-8927(25)00004-5","url":null,"abstract":"","PeriodicalId":72541,"journal":{"name":"Cell insight","volume":"4 1","pages":"Article 100230"},"PeriodicalIF":0.0,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143175982","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Roles of core fucosylation modification in immune system and diseases 核心岩藻糖基化修饰在免疫系统和疾病中的作用
Cell insight Pub Date : 2025-02-01 Epub Date: 2024-10-09 DOI: 10.1016/j.cellin.2024.100211
Qiu Pan , Xiao-Lian Zhang
{"title":"Roles of core fucosylation modification in immune system and diseases","authors":"Qiu Pan ,&nbsp;Xiao-Lian Zhang","doi":"10.1016/j.cellin.2024.100211","DOIUrl":"10.1016/j.cellin.2024.100211","url":null,"abstract":"<div><div>Core fucosylation, catalyzed by α1,6-fucosyltransferase (FUT8), is an important <em>N-</em>glycosylation modification process that attaches a fucose residue via an α1,6-linkage to the core <em>N</em>-acetylglucosamine of <em>N</em>-glycans in mammals. Research over the past three decades has revealed the critical role of FUT8-mediated core fucosylation modification in various physiological and pathological processes, including cell growth, adhesion, receptor activation, antibody-dependent cellular cytotoxicity (ADCC), tumor metastasis and infections. This review discusses the immune system function involving FUT8 and the mechanisms by which core fucosylation regulates immunity and contributes to disease. A deeper understanding of these mechanisms can provide insights into cellular biology and suggest new therapeutic approaches and targets for related diseases.</div></div>","PeriodicalId":72541,"journal":{"name":"Cell insight","volume":"4 1","pages":"Article 100211"},"PeriodicalIF":0.0,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142651844","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The cell autonomous and non-autonomous roles of itaconate in immune response 衣康酸在免疫应答中的细胞自主和非自主作用。
Cell insight Pub Date : 2025-02-01 Epub Date: 2024-11-22 DOI: 10.1016/j.cellin.2024.100224
Chao Chen , Xinjian Li
{"title":"The cell autonomous and non-autonomous roles of itaconate in immune response","authors":"Chao Chen ,&nbsp;Xinjian Li","doi":"10.1016/j.cellin.2024.100224","DOIUrl":"10.1016/j.cellin.2024.100224","url":null,"abstract":"<div><div>Itaconate which is discovered as a mammalian metabolite possessing antimicrobial and immunoregulatory activity has attracted much attention in the field of immunometabolism. Itaconate is synthesized by myeloid cells under conditions of pathogen infection and sterile inflammation. In addition to regulating immune response of myeloid cells, itaconate secreted from myeloid cells can also be taken up by non-myeloid cells to exert immunoregulatory effects in a cell non-autonomous manner. In this review, we recap the discovery of itaconate as a distinct immunologic regulator and effector, describe the development of itaconate biosensor, and detail the recent findings that decipher the mechanism underlying intercellular transport of itaconate. Based on these knowledges, we propose itaconate is a messenger transmitting immunologic signals from myeloid cells to other types of cells during host inflammation and immune defense.</div></div>","PeriodicalId":72541,"journal":{"name":"Cell insight","volume":"4 1","pages":"Article 100224"},"PeriodicalIF":0.0,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11773213/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143061127","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Spontaneous and environment induced genomic alterations in yeast model 酵母模型中自发和环境诱导的基因组变化
Cell insight Pub Date : 2025-02-01 Epub Date: 2024-09-26 DOI: 10.1016/j.cellin.2024.100209
Ke-Jing Li , Lei Qi , Ying-Xuan Zhu , Min He , Qian Xiang , Dao-Qiong Zheng
{"title":"Spontaneous and environment induced genomic alterations in yeast model","authors":"Ke-Jing Li ,&nbsp;Lei Qi ,&nbsp;Ying-Xuan Zhu ,&nbsp;Min He ,&nbsp;Qian Xiang ,&nbsp;Dao-Qiong Zheng","doi":"10.1016/j.cellin.2024.100209","DOIUrl":"10.1016/j.cellin.2024.100209","url":null,"abstract":"<div><div>While genomic alterations are fundamental to biological evolution, enabling adaptation and diversity, they can also result in detrimental outcomes, such as the development of genetic diseases including cancer. The budding yeast <em>Saccharomyces cerevisiae</em> serves as an exemplary model for investigating the mechanisms behind various genomic alterations, including point mutations, chromosomal rearrangements, and whole-chromosome aneuploidy. In this review, we highlight the application of genetic screening systems to assess the mutagenic effects of physical and chemical agents efficiently. Additionally, we discuss the utilization of high-throughput sequencing technologies to uncover comprehensive genomic alterations and rare genetic events. We provide a detailed summary of the features of genomic alterations and discuss the genetic mechanisms driving these changes under both spontaneous and stress-induced conditions. Given the high conservation of DNA replication and repair machinery across different organisms, the insights gained from studies on yeast offer valuable perspectives for understanding the delicate balance between genome plasticity and integrity in other species.</div></div>","PeriodicalId":72541,"journal":{"name":"Cell insight","volume":"4 1","pages":"Article 100209"},"PeriodicalIF":0.0,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142705407","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Just a SNP away: The future of in vivo massively parallel reporter assay 只差一个 SNP体内大规模并行报告分析的未来
Cell insight Pub Date : 2025-02-01 Epub Date: 2024-10-10 DOI: 10.1016/j.cellin.2024.100214
Katherine N. Degner , Jessica L. Bell , Sean D. Jones , Hyejung Won
{"title":"Just a SNP away: The future of in vivo massively parallel reporter assay","authors":"Katherine N. Degner ,&nbsp;Jessica L. Bell ,&nbsp;Sean D. Jones ,&nbsp;Hyejung Won","doi":"10.1016/j.cellin.2024.100214","DOIUrl":"10.1016/j.cellin.2024.100214","url":null,"abstract":"<div><div>The human genome is largely noncoding, yet the field is still grasping to understand how noncoding variants impact transcription and contribute to disease etiology. The massively parallel reporter assay (MPRA) has been employed to characterize the function of noncoding variants at unprecedented scales, but its application has been largely limited by the <em>in vitro</em> context. The field will benefit from establishing a systemic platform to study noncoding variant function across multiple tissue types under physiologically relevant conditions. However, to date, MPRA has been applied to only a handful of <em>in vivo</em> conditions. Given the complexity of the central nervous system and its widespread interactions with all other organ systems, our understanding of neuropsychiatric disorder-associated noncoding variants would be greatly advanced by studying their functional impact in the intact brain. In this review, we discuss the importance, technical considerations, and future applications of implementing MPRA in the <em>in vivo</em> space with the focus on neuropsychiatric disorders.</div></div>","PeriodicalId":72541,"journal":{"name":"Cell insight","volume":"4 1","pages":"Article 100214"},"PeriodicalIF":0.0,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142651969","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Progress in photoreceptor replacement therapy for retinal degenerative diseases 视网膜退行性疾病的光感受器替代治疗进展。
Cell insight Pub Date : 2025-02-01 Epub Date: 2024-11-28 DOI: 10.1016/j.cellin.2024.100223
Yuxin Du , Yin Shen
{"title":"Progress in photoreceptor replacement therapy for retinal degenerative diseases","authors":"Yuxin Du ,&nbsp;Yin Shen","doi":"10.1016/j.cellin.2024.100223","DOIUrl":"10.1016/j.cellin.2024.100223","url":null,"abstract":"<div><div>Retinal degenerative diseases encompass a diverse range of eye conditions that result in blindness, many due to photoreceptor dysfunction and loss. Regrettably, current clinical treatments are frequently not overly effective. However, photoreceptor transplantation shows promise as a potential therapy for late-stage retinal degenerative diseases. This article will review the various donor cell sources for this transplantation, as well as the mechanisms and factors that impact donor cell integration and material transfer, donor cell maturation, and other auxiliary methods that can be combined with photoreceptor transplantation to treat these degenerative retinal diseases.</div></div>","PeriodicalId":72541,"journal":{"name":"Cell insight","volume":"4 1","pages":"Article 100223"},"PeriodicalIF":0.0,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11773227/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143061184","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phase-separated chromatin compartments: Orchestrating gene expression through condensation 相分离的染色质区室:通过凝集协调基因表达
Cell insight Pub Date : 2024-12-01 Epub Date: 2024-10-12 DOI: 10.1016/j.cellin.2024.100213
Xin Li , Chengzhi Liu , Zhichao Lei , Huan Chen , Liang Wang
{"title":"Phase-separated chromatin compartments: Orchestrating gene expression through condensation","authors":"Xin Li ,&nbsp;Chengzhi Liu ,&nbsp;Zhichao Lei ,&nbsp;Huan Chen ,&nbsp;Liang Wang","doi":"10.1016/j.cellin.2024.100213","DOIUrl":"10.1016/j.cellin.2024.100213","url":null,"abstract":"<div><div>Eukaryotic genomes are organized into distinct chromatin compartments, some of which exhibit properties of biomolecular condensates. These condensates primarily form due to chromatin-associated proteins/complexes (CAPs). CAPs play a crucial role in gene expression, functioning as either transcriptional repressors or activators. Phase separation, a well-established biophysical phenomenon, is a key driver of chromatin condensate formation by CAPs. Notably, multivalent CAPs with the ability to engage in diverse interactions promote chromatin compaction, leading to the formation of transcriptionally repressed compartments. Conversely, interactions between intrinsically disordered region (IDR)-containing transcriptional regulators, mediated by their multivalent IDRs, lead to the formation of protein-rich, transcriptionally active droplets on decondensed genomic regions. Interestingly, both repressive heterochromatin and activating euchromatin condensates exhibit spontaneous phase separation and selectively enrich components with concordant transcriptional functions. This review delves into the mechanisms by which transcriptionally repressive CAPs orchestrate the formation of repressed chromatin domains. We further explore how a diverse array of transcription-related CAPs or core histone variants, via phase separation, influence gene expression by inducing erroneous transcription events, regulating expression levels, and facilitating the interconversion of transcriptionally repressed and active regions.</div></div>","PeriodicalId":72541,"journal":{"name":"Cell insight","volume":"3 6","pages":"Article 100213"},"PeriodicalIF":0.0,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142532224","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Insights into mosquito-borne arbovirus receptors 对蚊媒虫媒病毒受体的认识
Cell insight Pub Date : 2024-12-01 Epub Date: 2024-08-24 DOI: 10.1016/j.cellin.2024.100196
Jianying Liu , Yixin Quan , Hua Tong , Yibin Zhu , Xiaolu Shi , Yang Liu , Gong Cheng
{"title":"Insights into mosquito-borne arbovirus receptors","authors":"Jianying Liu ,&nbsp;Yixin Quan ,&nbsp;Hua Tong ,&nbsp;Yibin Zhu ,&nbsp;Xiaolu Shi ,&nbsp;Yang Liu ,&nbsp;Gong Cheng","doi":"10.1016/j.cellin.2024.100196","DOIUrl":"10.1016/j.cellin.2024.100196","url":null,"abstract":"<div><div>The increasing global prevalence of mosquito-borne viruses has emerged as a significant threat to human health and life. Identifying receptors for these viruses is crucial for improving our knowledge of viral pathogenesis and developing effective antiviral strategies. The widespread application of CRISPR-Cas9 screening have led to the discovery of many mosquito-borne virus receptors. The revealed structures of virus-receptor complexes also provide important information for understanding their interaction mechanisms. This review provides a comprehensive summary of both conventional and novel approaches for identifying new viral receptors and the putative entry factors of the most prevalent mosquito-borne viruses within the <em>Flaviviridae</em>, <em>Togaviridae</em>, and <em>Bunyavirales</em>. At the same time, we emphasize the common receptors utilized by these viruses for entry into both vertebrate hosts and mosquito vectors. We discuss promising avenues for developing anti-mosquito-borne viral strategies that target these receptors. Notably, targeting universal receptors of specific mosquito-borne viruses in both vertebrates and mosquitoes offers dual benefits for disease prevention. Additionally, the widespread use of AI-based machine learning and protein structure prediction will accelerate the identification of new viral receptors and provide new avenues for antiviral drug discovery.</div></div>","PeriodicalId":72541,"journal":{"name":"Cell insight","volume":"3 6","pages":"Article 100196"},"PeriodicalIF":0.0,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772892724000518/pdfft?md5=b58af911ce662736b3c07a46c56b3b91&pid=1-s2.0-S2772892724000518-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142314994","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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