{"title":"Fast Track Treatment of Hypothyroidism with Levothyroxine: Reaching Homeostasis within Four Weeks","authors":"Simon L. Goede","doi":"10.1007/s10441-023-09461-x","DOIUrl":"10.1007/s10441-023-09461-x","url":null,"abstract":"<div><p>With the current clinical method for the treatment of hypothyroidism the target for the optimum individual values for free thyroxine concentrations [FT4] and thyrotropine concentrations [TSH] of the specific patient are unknown. This situation leads to unnecessary long experimental medication administration that can take a period of sometimes one year. In this article a method will be described where hypothyroid patients are characterized with weekly measured FT4 and TSH concentrations during the first three weeks of synthetic thyroxine or levothyroxine (L-T4) treatment to predict their optimum [FT4] and belonging [TSH] endpoint for a euthyroid homeostatic state. The treatment with levothyroxine will start for all patients with a reference dose of 100 µg, which can be adjusted by the treating physician to a more safe and appropriate dose for the individual which is monitored with weekly thyroid function tests to observe the progress. After three weeks all characteristics of the patient can be inferred from the measured data. The final titration target together with the individual thyroxine half life can be calculated. With the known characteristics and the L-T4 titration target the clinician or treating physician has an instrument to reduce the experimental treatment burden for the patient from one year to a maximum of four weeks.</p></div>","PeriodicalId":7057,"journal":{"name":"Acta Biotheoretica","volume":"71 2","pages":""},"PeriodicalIF":1.3,"publicationDate":"2023-03-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9074943","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Olumuyiwa James Peter, Hasan S. Panigoro, Afeez Abidemi, Mayowa M. Ojo, Festus Abiodun Oguntolu
{"title":"Mathematical Model of COVID-19 Pandemic with Double Dose Vaccination","authors":"Olumuyiwa James Peter, Hasan S. Panigoro, Afeez Abidemi, Mayowa M. Ojo, Festus Abiodun Oguntolu","doi":"10.1007/s10441-023-09460-y","DOIUrl":"10.1007/s10441-023-09460-y","url":null,"abstract":"<div><p>This paper is concerned with the formulation and analysis of an epidemic model of COVID-19 governed by an eight-dimensional system of ordinary differential equations, by taking into account the first dose and the second dose of vaccinated individuals in the population. The developed model is analyzed and the threshold quantity known as the control reproduction number <span>(mathcal {R}_{0})</span> is obtained. We investigate the equilibrium stability of the system, and the COVID-free equilibrium is said to be locally asymptotically stable when the control reproduction number is less than unity, and unstable otherwise. Using the least-squares method, the model is calibrated based on the cumulative number of COVID-19 reported cases and available information about the mass vaccine administration in Malaysia between the 24th of February 2021 and February 2022. Following the model fitting and estimation of the parameter values, a global sensitivity analysis was performed by using the Partial Rank Correlation Coefficient (PRCC) to determine the most influential parameters on the threshold quantities. The result shows that the effective transmission rate <span>((alpha ))</span>, the rate of first vaccine dose <span>((phi ))</span>, the second dose vaccination rate <span>((sigma ))</span> and the recovery rate due to the second dose of vaccination <span>((eta ))</span> are the most influential of all the model parameters. We further investigate the impact of these parameters by performing a numerical simulation on the developed COVID-19 model. The result of the study shows that adhering to the preventive measures has a huge impact on reducing the spread of the disease in the population. Particularly, an increase in both the first and second dose vaccination rates reduces the number of infected individuals, thus reducing the disease burden in the population.</p></div>","PeriodicalId":7057,"journal":{"name":"Acta Biotheoretica","volume":"71 2","pages":""},"PeriodicalIF":1.3,"publicationDate":"2023-03-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10441-023-09460-y.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9568735","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A Very Nice Meal with an Unsatisfying Appetizer","authors":"Antonella Tramacere","doi":"10.1007/s10441-023-09458-6","DOIUrl":"10.1007/s10441-023-09458-6","url":null,"abstract":"<div><p>As an Italian from the South, I have been socialized to care a lot about cooking. Quality of the food is a fundamental starting point for a successful result; in addition, you need expertise in food preparation and the capacity to balance dishes together in a single meal, from appetizer to dessert.</p><p>I find Isabella Sarto-Jackson’s book <i>The Making and Breaking of Mind</i> a very nice meal with good-quality food prepared with expert hands, but the dish balance is a bit unsatisfying. I find dishes not always coherently combined with the general style of the meal, starting with the appetizer. A good appetizer would tell you what you should expect from the overall meal and would make you crave for tasting the rest. Instead, the book’s introduction and the first chapter seem to promise something different and does not give you a satisfactory idea of what you will read later. This is a pity, because overall the meal is quite nice, and most of the dishes delicious.</p></div>","PeriodicalId":7057,"journal":{"name":"Acta Biotheoretica","volume":"71 2","pages":""},"PeriodicalIF":1.3,"publicationDate":"2023-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50006993","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Heuristics Facilitates the Evolution of Transitive Inference and Social Hierarchy in a Large Group","authors":"Kazuto Doi, Mayuko Nakamaru","doi":"10.1007/s10441-023-09459-5","DOIUrl":"10.1007/s10441-023-09459-5","url":null,"abstract":"<div><p>Transitive inference (TI) refers to social cognition that facilitates the discernment of unknown relationships between individuals using known relationships. It is extensively reported that TI evolves in animals living in a large group because TI could assess relative rank without deducing all dyadic relationships, which averts costly fights. The relationships in a large group become so complex that social cognition may not be developed adequately to handle such complexity. If members apply TI to all possible members in the group, TI requires extremely highly developed cognitive abilities especially in a large group. Instead of developing cognitive abilities significantly, animals may apply simplified TI we call reference TI in this study as heuristic approaches. The reference TI allows members to recognize and remember social interactions only among a set of reference members rather than all potential members. Our study assumes that information processes in the reference TI comprises (1) the number of reference members based on which individuals infer transitively, (2) the number of reference members shared by the same strategists, and (3) memory capacity. We examined how information processes evolve in a large group using evolutionary simulations in the hawk–dove game. Information processes with almost any numbers of reference members could evolve in a large group as long as the numbers of shared reference member are high because information from the others’ experiences is shared. TI dominates immediate inference, which assesses relative rank on direct interactions, because TI could establish social hierarchy more rapidly applying information from others’ experiences.</p></div>","PeriodicalId":7057,"journal":{"name":"Acta Biotheoretica","volume":"71 2","pages":""},"PeriodicalIF":1.3,"publicationDate":"2023-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10441-023-09459-5.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9925875","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The Multi-Causal Basis of Developmental Potential Construction","authors":"Davide Vecchi, Gil Santos","doi":"10.1007/s10441-023-09456-8","DOIUrl":"10.1007/s10441-023-09456-8","url":null,"abstract":"<div><p>In this article we analyse the issue of what accounts for developmental potential, i.e., the possible phenotypes a developing organism can manifest during ontogeny. We shall argue in favour of two theses. First, although the developing organism is the unit of development, the complete causal basis for its potential to develop does neither lie entirely in itself as a whole nor in any specific part of itself (such as its genome). Thus, the extra-organismal environment must be counted as one of the three necessary, partial and complementary causal bases for development potential. Secondly, we shall defend a constructivist view of the developmental process. If the genome, the developing organism and the extra-organismal environment are to be counted as proper elements of the causal basis for an organism’s developmental potential, the latter is not a given. Rather, it is the result of an interaction-based construction, a process sometimes generating genuine developmental novelty. We will thus argue for an interactionist multi-causal basis view of developmental potential construction. We contend that our view provides a biologically tenable and metaphysically coherent account of developmental dynamics.</p></div>","PeriodicalId":7057,"journal":{"name":"Acta Biotheoretica","volume":"71 1","pages":""},"PeriodicalIF":1.3,"publicationDate":"2023-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10441-023-09456-8.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9449104","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The Connection of the Generalized Robinson–Foulds Metric with Partial Wiener Indices","authors":"Damir Vukičević, Domagoj Matijević","doi":"10.1007/s10441-023-09457-7","DOIUrl":"10.1007/s10441-023-09457-7","url":null,"abstract":"<div><p>In this work we propose the partial Wiener index as one possible measure of branching in phylogenetic evolutionary trees. We establish the connection between the generalized Robinson–Foulds (RF) metric for measuring the similarity of phylogenetic trees and partial Wiener indices by expressing the number of conflicting pairs of edges in the generalized RF metric in terms of partial Wiener indices. To do so we compute the minimum and maximum value of the partial Wiener index <span>(Wleft(T,r, nright))</span>, where <span>(T)</span> is a binary rooted tree with root <span>(r)</span> and <span>(n)</span> leaves. Moreover, under the Yule probabilistic model, we show how to compute the expected value of <span>(Wleft(T,r, nright))</span>. As a direct consequence, we give exact formulas for the upper bound and the expected number of conflicting pairs. By doing so we provide a better theoretical understanding of the computational complexity of the generalized RF metric.</p></div>","PeriodicalId":7057,"journal":{"name":"Acta Biotheoretica","volume":"71 1","pages":""},"PeriodicalIF":1.3,"publicationDate":"2023-01-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9190174","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Model of Morphogenesis with Repelling Signaling","authors":"A. Minarsky, S. Krymsky, C. Soulé, N. Morozova","doi":"10.1007/s10441-022-09454-2","DOIUrl":"10.1007/s10441-022-09454-2","url":null,"abstract":"<div><p>The paper is devoted to a conceptual model of cell patterning, based on a generalized notion of the epigenetic code of a cell determining its state<i>.</i> We introduce the concept of signaling depending both upon the spatial distance between cells and the distance between their cell states (s-distance); signaling can repel cells in the space of cell states (s-space) or attract them. The influence of different types of repelling signaling on the evolution of cells is considered. Stabilizing signaling, namely a signaling monotonically decreasing with s-distance, causes the restoring of cell states after perturbations; destabilizing signaling, i.e., the one in which the signaling monotonically increases with s-distance, causes the appearance of pairs of cells with alternating cell states (one close to the state conventionally called “head”, and another close to the “tail” state). Non-monotonic (in s-space) signaling splits the cells into groups. The model shows that different types of signaling may provide different types of cellular patterns. General principles for applying this model to complex cellular structures are discussed.</p></div>","PeriodicalId":7057,"journal":{"name":"Acta Biotheoretica","volume":"71 1","pages":""},"PeriodicalIF":1.3,"publicationDate":"2022-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10413099","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Correction to: Stem Cells and the Microenvironment: Reciprocity with Asymmetry in Regenerative Medicine","authors":"Guglielmo Militello, Marta Bertolaso","doi":"10.1007/s10441-022-09455-1","DOIUrl":"10.1007/s10441-022-09455-1","url":null,"abstract":"","PeriodicalId":7057,"journal":{"name":"Acta Biotheoretica","volume":"71 1","pages":""},"PeriodicalIF":1.3,"publicationDate":"2022-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10379339","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Muhamad Hifzhudin Noor Aziz, Ahmad Dzulhilmi Ahmad Safaruddin, Nor Aishah Hamzah, Siti Suzlin Supadi, Zhou Yuhao, Muhamad Afiq Aziz
{"title":"Modelling the Effect of Vaccination Program and Inter-state Travel in the Spread of COVID-19 in Malaysia","authors":"Muhamad Hifzhudin Noor Aziz, Ahmad Dzulhilmi Ahmad Safaruddin, Nor Aishah Hamzah, Siti Suzlin Supadi, Zhou Yuhao, Muhamad Afiq Aziz","doi":"10.1007/s10441-022-09453-3","DOIUrl":"10.1007/s10441-022-09453-3","url":null,"abstract":"<div><p>A modified version of the SEIR model with the effects of vaccination and inter-state movement is proposed to simulate the spread of COVID-19 in Malaysia. A mathematical analysis of the proposed model was performed to derive the basic reproduction number. To enhance the model’s forecasting capabilities, the model parameters were estimated using the Nelder–Mead simplex method by fitting the model outputs to the observed data. Our results showed a good fit between the model outputs and available data, where the model was then able to perform short-term predictions. In line with the rapid vaccination program, our model predicted that the COVID-19 cases in the country would decrease by the end of August. Furthermore, our findings indicated that relaxing travel restrictions from a highly vaccinated region to a low vaccinated region would result in an epidemic outbreak.</p></div>","PeriodicalId":7057,"journal":{"name":"Acta Biotheoretica","volume":"71 1","pages":""},"PeriodicalIF":1.3,"publicationDate":"2022-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10441-022-09453-3.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9072397","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Infectious Disease Spreading Fought by Multiple Vaccines Having a Prescribed Time Effect","authors":"Rinaldo M. Colombo, Mauro Garavello","doi":"10.1007/s10441-022-09452-4","DOIUrl":"10.1007/s10441-022-09452-4","url":null,"abstract":"<div><p>We propose a framework for the description of the effects of vaccinations on the spreading of an epidemic disease. Different vaccines can be dosed, each providing different immunization times and immunization levels. Differences due to individuals’ ages are accounted for through the introduction of either a continuous age structure or a discrete set of age classes. Extensions to gender differences or to distinguish fragile individuals can also be considered. Within this setting, vaccination strategies can be simulated, tested and compared, as is explicitly described through numerical integrations.</p></div>","PeriodicalId":7057,"journal":{"name":"Acta Biotheoretica","volume":"71 1","pages":""},"PeriodicalIF":1.3,"publicationDate":"2022-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10441-022-09452-4.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9079071","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}