Plant Communications最新文献_第2页

Fluctuation in nitrate availability impacts cytokinin biosynthesis through histone modifications of IPT3 in Arabidopsis roots for growth acclimation. 硝酸盐有效性的波动通过组蛋白修饰拟南芥根系IPT3来影响细胞分裂素的生物合成，从而促进生长驯化。

IF 11.6 1区生物学

Plant Communications Pub Date : 2025-09-23 DOI: 10.1016/j.xplc.2025.101531

Fanny Bellegarde, Olivia Tjahjono, Mika Yoshino-Kida, Takatoshi Kiba, Miki Shibutani, Mei Kuriyama, Louis J Irving, Mikiko Kojima, Kazuki Miyata, Hitoshi Sakakibara

{"title":"Fluctuation in nitrate availability impacts cytokinin biosynthesis through histone modifications of IPT3 in Arabidopsis roots for growth acclimation.","authors":"Fanny Bellegarde, Olivia Tjahjono, Mika Yoshino-Kida, Takatoshi Kiba, Miki Shibutani, Mei Kuriyama, Louis J Irving, Mikiko Kojima, Kazuki Miyata, Hitoshi Sakakibara","doi":"10.1016/j.xplc.2025.101531","DOIUrl":"https://doi.org/10.1016/j.xplc.2025.101531","url":null,"abstract":"In soil, nitrate availability is variable and often a limiting factor for crop growth. Plants need to acclimate rapidly to fluctuations. The phytohormone cytokinin (CK) plays a pivotal role in nitrate signaling as a secondary growth-regulating signal. However, the mechanisms that regulate CK action in response to fluctuating nitrate levels remain poorly understood. Here, we show that chromatin modification of IPT3, a key gene for cytokinin biosynthesis, is crucial for growth acclimation under fluctuating nitrate environments. The transcriptional regulation of IPT3 drives CK output in response to nitrate availability, thereby controlling the balance of growth between roots and shoots. This rapid and dynamic regulation is mediated by two antagonistic histone H3 modifications: H3K27me3 and H3K4me3. Using mutants impaired in the deposition or removal of these modifications, we identify several chromatin effectors involved and confirm that the chromatin dynamics, influenced by nitrate fluctuation, fine-tune CK biosynthesis. Our findings provide insights into the epigenetic mechanisms regulating CK biosynthesis and open new avenues for enhancing plant acclimation to fluctuating nutritional environments.","PeriodicalId":52373,"journal":{"name":"Plant Communications","volume":" ","pages":"101531"},"PeriodicalIF":11.6,"publicationDate":"2025-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145139542","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

From phenomics to post-phenomics: multidisciplinary integration driving autonomous agricultural systems. 从表型组学到后表型组学：多学科整合驱动自主农业系统。

IF 11.6 1区生物学

Plant Communications Pub Date : 2025-09-23 DOI: 10.1016/j.xplc.2025.101532

Su Yang, Menachem Moshelion, Hao Chen, Pei Xu

引用次数: 0

A Flavin-dependent Monooxygenase Favors the Formation of (6S)-α-Bitter Acids in Hop Glandular Trichomes. 一种黄素依赖性单加氧酶促进啤酒花腺毛中(6S)-α-苦酸的形成。

IF 11.6 1区生物学

Plant Communications Pub Date : 2025-09-23 DOI: 10.1016/j.xplc.2025.101528

Chengyong Feng, Baoxiu Liu, Peipei Zhao, Liying Ma, Jianxu Li, Guodong Wang

引用次数: 0

The marine diatom Phaeodactylum tricornutum as a versatile bioproduction chassis: Current progress, challenges and perspectives. 海洋硅藻三角褐指藻作为多功能生物生产的基础：目前的进展、挑战和展望。

IF 11.6 1区生物学

Plant Communications Pub Date : 2025-09-23 DOI: 10.1016/j.xplc.2025.101519

Song Wang, Zhangli Hu

{"title":"The marine diatom Phaeodactylum tricornutum as a versatile bioproduction chassis: Current progress, challenges and perspectives.","authors":"Song Wang, Zhangli Hu","doi":"10.1016/j.xplc.2025.101519","DOIUrl":"https://doi.org/10.1016/j.xplc.2025.101519","url":null,"abstract":"Beyond its importance in diatom studies, the marine model diatom Phaeodactylum tricornutum has emerged as a versatile photosynthetic chassis for sustainable bioproduction, leveraging both native bioactive metabolites and engineered heterologous compounds through synthetic biology. Over the past three decades, transformative advances in genetic tool development, including transgenic element optimization, CRISPR/Cas genome editing and high-efficiency transformation systems, have driven strain engineering for elevated fucoxanthin, fatty acid, triacylglycerol yields and successful synthesis of diverse heterologous products, from terpenoids and therapeutic peptides to sustainable materials. Concurrently, advances in molecular toolkits have refined chassis optimization by elucidating fundamental biological mechanisms underlying nutrient uptake, environmental stress adaptation, stimuli sensing and cell development. Despite the progress, critical challenges persist, particularly suboptimal product yield, biomass limitations as well as a prohibitive production cost which hinder industrial translation. This review examines emerging strategies, such as chloroplastic gene expression, DNA site-specific integration and trophic alteration, promising for species improvement, while addressing other scale-up considerations including cultivation strategies, techno-economic analysis and regulatory policies. The integrative efforts could accelerate the transition of P. tricornutum from a model diatom to a scalable, eco-friendly biomanufacturing platform.","PeriodicalId":52373,"journal":{"name":"Plant Communications","volume":" ","pages":"101519"},"PeriodicalIF":11.6,"publicationDate":"2025-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145139599","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

A complete telomere-to-telomere genome assembly of Solanum melongena uncovers key regulators in pan-tissue anthocyanin biosynthesis. 一个完整的端粒到端粒基因组组装茄龙葵揭示泛组织花青素生物合成的关键调控因子。

IF 11.6 1区生物学

Plant Communications Pub Date : 2025-09-23 DOI: 10.1016/j.xplc.2025.101533

Qingzhen Wei, Wuhong Wang, Yunzhu Wang, Jiaqi Ai, Tianhua Hu, Haijiao Hu, Jinglei Wang, Yaqin Yan, Hongtao Pang, Na Hu, Chonglai Bao

引用次数: 0

Phylogenomic discordance is mainly driven by pervasive ancient hybridization and incomplete lineage sorting during the early divergence of major angiosperm lineages. 系统发育不一致主要是由于在主要被子植物谱系分化早期普遍存在的古代杂交和不完整的谱系分选所致。

IF 11.6 1区生物学

Plant Communications Pub Date : 2025-09-23 DOI: 10.1016/j.xplc.2025.101529

Xiaomei Huang, Lingxiao Yang, Xiaoya Ma, Zhiping Yang, Qiuping Wang, Hao Wang, Ya Yang, Diego F Morales-Briones, Bojian Zhong

{"title":"Phylogenomic discordance is mainly driven by pervasive ancient hybridization and incomplete lineage sorting during the early divergence of major angiosperm lineages.","authors":"Xiaomei Huang, Lingxiao Yang, Xiaoya Ma, Zhiping Yang, Qiuping Wang, Hao Wang, Ya Yang, Diego F Morales-Briones, Bojian Zhong","doi":"10.1016/j.xplc.2025.101529","DOIUrl":"https://doi.org/10.1016/j.xplc.2025.101529","url":null,"abstract":"Most extant angiosperms belong to Mesangiospermae (eudicots, monocots, magnoliids, Chloranthales, and Ceratophyllales). Resolving the evolutionary relationships among the five lineages of Mesangiospermae is important for understanding the early diversification process of angiosperms. However, the rapid early diversification of angiosperms within a short geological period complicates the untangling of phylogenetic relationships among these Mesangiospermae lineages. Here, we used 177 publicly available angiosperm genomes to reconstruct the phylogeny of Mesangiospermae using multiple orthology inference approaches, character coding schemes, and data filtering criteria. Importantly, we investigated the potential causes of phylogenetic discordance and inferred phylogenetic networks to explore reticulating events among the five lineages of Mesangiospermae. Coalescent simulation analyses suggested that a combination of incomplete lineage sorting and hybridization could explain the high levels of discordance among nuclear genes in the backbone of Mesangiospermae. Cytonuclear discordance was observed among the five Mesangiospermae lineages, potentially resulting from hybridization. Furthermore, systematic errors in species networks cannot be overlooked. Our study revealed that deep phylogenetic discordances among the five Mesangiospermae lineages were affected by multiple factors, particularly pervasive ancient hybridization.","PeriodicalId":52373,"journal":{"name":"Plant Communications","volume":" ","pages":"101529"},"PeriodicalIF":11.6,"publicationDate":"2025-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145132471","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

ZmHSCF1 enhances Agrobacterium-mediated transformation frequency in commercial maize inbred lines by promoting embryogenic callus proliferation. ZmHSCF1通过促进胚性愈伤组织增殖，提高农杆菌介导的玉米商品自交系转化频率。

IF 11.6 1区生物学

Plant Communications Pub Date : 2025-09-18 DOI: 10.1016/j.xplc.2025.101525

Yingshuang Li, Yan Geng, Xiangyu Qing, Xiaoya Yin, Feng Xu, Liangliang Huang, Renzhao Zhu, Baojian Chen, Tianxia Yang, Weibin Song, Haiming Zhao, Jinsheng Lai, Yunlu Shi, Shengnan Liu

引用次数: 0

A glutamyl-tRNA reductase and its binding protein promote transitory starch biosynthesis and enhance grain quality and yield in rice. 谷氨酰trna还原酶及其结合蛋白促进水稻瞬时淀粉的生物合成，提高籽粒品质和产量。

IF 11.6 1区生物学

Plant Communications Pub Date : 2025-09-17 DOI: 10.1016/j.xplc.2025.101527

Yingqing Duan, Xiaoxue Li, Liuyang Ma, Guiai Jiao, Ruijie Cao, Nannan Dong, Xinwei Li, Zihang Wang, Ping Wang, Shaoqing Tang, Xiangjin Wei, Peisong Hu

{"title":"A glutamyl-tRNA reductase and its binding protein promote transitory starch biosynthesis and enhance grain quality and yield in rice.","authors":"Yingqing Duan, Xiaoxue Li, Liuyang Ma, Guiai Jiao, Ruijie Cao, Nannan Dong, Xinwei Li, Zihang Wang, Ping Wang, Shaoqing Tang, Xiangjin Wei, Peisong Hu","doi":"10.1016/j.xplc.2025.101527","DOIUrl":"https://doi.org/10.1016/j.xplc.2025.101527","url":null,"abstract":"Transitory starch in rice leaves is essential for temporary carbon storage, plant growth development, and subsequent grain filling, yet its regulatory mechanisms for transitory starch biosynthesis remain unclear. Here, we found that Leaf Starch Deficiency 3 (LSD3), as a rice glutamyl-tRNA reductase (GluTR), interacts with GluTRBP (GluTR-binding protein), and GluTRBP interacts with granule-bound starch synthase II (GBSSII), the key enzyme for leaf amylose synthesis. LSD3-GluTRBP, as a molecular module, can maintain the protein stability and enzymatic activity of GBSSII. The lsd3 and glutrbp mutants exhibited lower GBSSII enzymatic activity, leading to significant reductions in leaf starch content. In addition, lsd3 and glutrbp mutants displayed severe defects in carbon sources transport from leaves to developing grains, with significantly down-regulated expression of genes associated with carbon source transport. Finally, the lsd3 and glutrbp mutants showed significantly reduced endosperm storage starch content and severely compromised grain quality and yield. Notably, overexpression of GBSSII partially rescued the defective phenotypes in both leaves and grains of lsd3 and glutrbp mutants. In summary, our results establish the LSD3-GluTRBP module functions upstream of GBSSII and plays a crucial role in transitory starch biosynthesis and the determination of grain quality and yield in rice. These findings provide new molecular targets for simultaneous improvement of grain yield and quality in rice.","PeriodicalId":52373,"journal":{"name":"Plant Communications","volume":" ","pages":"101527"},"PeriodicalIF":11.6,"publicationDate":"2025-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145088171","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

ARBUSCULAR MYCORRHIZAL NETWORKS-A CLIMATE-SMART BLUEPRINT FOR AGRICULTURE. 丛枝菌根网络——农业气候智能型蓝图。

IF 11.6 1区生物学

Plant Communications Pub Date : 2025-09-16 DOI: 10.1016/j.xplc.2025.101526

Li Wang, Shiqian Guo, Jinlin Zhang, Katie J Field, Manuel Delgado Baquerizo, Tancredo A F de Souza, Soon-Jae Lee, Mohamed Hijri, Xiaoqian Shang, Dandi Sun, Hanwen Cao, Shoujiang Feng, Li Wang, Hao Ji, Marcel Van der Heijden, Kadambot H M Siddique, Gary Y Gan

{"title":"ARBUSCULAR MYCORRHIZAL NETWORKS-A CLIMATE-SMART BLUEPRINT FOR AGRICULTURE.","authors":"Li Wang, Shiqian Guo, Jinlin Zhang, Katie J Field, Manuel Delgado Baquerizo, Tancredo A F de Souza, Soon-Jae Lee, Mohamed Hijri, Xiaoqian Shang, Dandi Sun, Hanwen Cao, Shoujiang Feng, Li Wang, Hao Ji, Marcel Van der Heijden, Kadambot H M Siddique, Gary Y Gan","doi":"10.1016/j.xplc.2025.101526","DOIUrl":"https://doi.org/10.1016/j.xplc.2025.101526","url":null,"abstract":"Arbuscular mycorrhizal (AM) fungal symbiosis offers a transformative solution in mitigating agroecosystem challenges linked with synthetic chemical overuse. However, the potential of AM-plant communications in response to anthropogenic activities and hyphal network functionality remains poorly understood. Here, we reposition AM fungal hyphosphere networks as keystone ecological infrastructure for sustainable agroecosystems. Synthesizing thousands of worldwide experimental studies reveals the main environmental functions of AM fungi-plant communication: enhancing agroecosystem resilience by buffering crops against various (a)biotic stressors through molecular signaling and physiological changes; mediating energy transferring via small RNA-mediated cross-kingdom interactions; facilitating hydraulic redistribution in the soil profile via hyphospheric network; and optimizing root architecture via effective colonization for nutrient acquisition. Some anthropogenic practices-soil disturbance, non-mycorrhizal crop monoculture, and fungicide use-disrupt AM hyphal networks; however, those can be minimized through improved farming practices, such as cropping diversification with legumes and AM fungi-compatible crops, AM-responsive plant genotypes, effective AM fungal inoculation, and microbial consortia amendments. Bridging AM fungal mechanisms with anthropogenic practices and policy supports is essential to scale AM benefits to various ecoregions. Exploring AM fungal functionality can increase nutrient use efficiency, reduce chemical inputs, and enhance ecosystem productivity, offering a microbial-centric blueprint in helping the UN's sustainability goals.","PeriodicalId":52373,"journal":{"name":"Plant Communications","volume":" ","pages":"101526"},"PeriodicalIF":11.6,"publicationDate":"2025-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145082317","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

The DCC1-DCCR1 phytocytokine-receptor kinase pair activates basal immunity in wheat. DCC1-DCCR1植物细胞因子受体激酶对激活小麦基础免疫。

IF 11.6 1区生物学

Plant Communications Pub Date : 2025-09-15 DOI: 10.1016/j.xplc.2025.101524

Chuanchun Yin, Siru Shi, Zhaoxi Lu, Hongxu Li, Lijun Wang, Yongjian Zhang, Jinghui Yan, Cuicui Du, Haimiao Zhang, Hongqian Lu, Yaxi Zhu, Xiao Luo, Chao Wang, Guochen Qin, Xinhua Ding, Shuguo Hou

引用次数: 0