Mohammed Bedhane, Julius van der Werf, Sara de Las Heras-Saldana, Leland Ackerson, Dajeong Lim, Byoungho Park, Mi Na Park, Seunghee Roh, Samuel Clark
{"title":"Parameter estimation and assessment of bias in genetic evaluation of carcass traits in Hanwoo cattle using real and simulated data.","authors":"Mohammed Bedhane, Julius van der Werf, Sara de Las Heras-Saldana, Leland Ackerson, Dajeong Lim, Byoungho Park, Mi Na Park, Seunghee Roh, Samuel Clark","doi":"10.5187/jast.2023.e36","DOIUrl":"10.5187/jast.2023.e36","url":null,"abstract":"<p><p>Most carcass and meat quality traits are moderate to highly heritable, indicating that they can be improved through selection. Genetic evaluation for these types of traits is performed using performance data obtained from commercial and progeny testing evaluation. The performance data from commercial farms are available in large volume, however, some drawbacks have been observed. The drawback of the commercial data is mainly due to sorting of animals based on live weight prior to slaughter, and this could lead to bias in the genetic evaluation of later measured traits such as carcass traits. The current study has two components to address the drawback of the commercial data. The first component of the study aimed to estimate genetic parameters for carcass and meat quality traits in Korean Hanwoo cattle using a large sample size of industry-based carcass performance records (n = 469,002). The second component of the study aimed to describe the impact of sorting animals into different contemporary groups based on an early measured trait and then examine the effect on the genetic evaluation of subsequently measured traits. To demonstrate our objectives, we used real performance data to estimate genetic parameters and simulated data was used to assess the bias in genetic evaluation. The results of our first study showed that commercial data obtained from slaughterhouses is a potential source of carcass performance data and useful for genetic evaluation of carcass traits to improve beef cattle performance. However, we observed some harvesting effect which leads to bias in genetic evaluation of carcass traits. This is mainly due to the selection of animal based on their body weight before arrival to slaughterhouse. Overall, the non-random allocation of animals into a contemporary group leads to a biased estimated breeding value in genetic evaluation, the severity of which increases when the evaluation traits are highly correlated.</p>","PeriodicalId":50256,"journal":{"name":"Journal of Applied Probability","volume":"42 1","pages":"1180-1193"},"PeriodicalIF":2.3,"publicationDate":"2023-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11007296/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"88460180","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Tessellation-valued processes that are generated by cell division","authors":"Servet Martínez, Werner Nagel","doi":"10.1017/jpr.2023.66","DOIUrl":"https://doi.org/10.1017/jpr.2023.66","url":null,"abstract":"Abstract Processes of random tessellations of the Euclidean space $mathbb{R}^d$ , $dgeq 1$ , are considered that are generated by subsequent division of their cells. Such processes are characterized by the laws of the life times of the cells until their division and by the laws for the random hyperplanes that divide the cells at the end of their life times. The STIT (STable with respect to ITerations) tessellation processes are a reference model. In the present paper a generalization concerning the life time distributions is introduced, a sufficient condition for the existence of such cell division tessellation processes is provided, and a construction is described. In particular, for the case that the random dividing hyperplanes have a Mondrian distribution—which means that all cells of the tessellations are cuboids—it is shown that the intrinsic volumes, except the Euler characteristic, can be used as the parameter for the exponential life time distribution of the cells.","PeriodicalId":50256,"journal":{"name":"Journal of Applied Probability","volume":"10 4","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135221049","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Trajectory fitting estimation for reflected stochastic linear differential equations of a large signal","authors":"Xuekang Zhang, Huisheng Shu","doi":"10.1017/jpr.2023.78","DOIUrl":"https://doi.org/10.1017/jpr.2023.78","url":null,"abstract":"Abstract In this paper we study the drift parameter estimation for reflected stochastic linear differential equations of a large signal. We discuss the consistency and asymptotic distributions of trajectory fitting estimator (TFE).","PeriodicalId":50256,"journal":{"name":"Journal of Applied Probability","volume":"145 38","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135862988","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A large-deviation principle for birth–death processes with a linear rate of downward jumps","authors":"Artem Logachov, Yuri Suhov, Nikita Vvedenskaya, Anatoly Yambartsev","doi":"10.1017/jpr.2023.75","DOIUrl":"https://doi.org/10.1017/jpr.2023.75","url":null,"abstract":"Abstract Birth–death processes form a natural class where ideas and results on large deviations can be tested. We derive a large-deviation principle under an assumption that the rate of jump down (death) grows asymptotically linearly with the population size, while the rate of jump up (birth) grows sublinearly. We establish a large-deviation principle under various forms of scaling of the underlying process and the corresponding normalization of the logarithm of the large-deviation probabilities. The results show interesting features of dependence of the rate functional upon the parameters of the process and the forms of scaling and normalization.","PeriodicalId":50256,"journal":{"name":"Journal of Applied Probability","volume":"19 35","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135813748","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"On a time-changed variant of the generalized counting process","authors":"M. Khandakar, K. K. Kataria","doi":"10.1017/jpr.2023.70","DOIUrl":"https://doi.org/10.1017/jpr.2023.70","url":null,"abstract":"Abstract In this paper, we time-change the generalized counting process (GCP) by an independent inverse mixed stable subordinator to obtain a fractional version of the GCP. We call it the mixed fractional counting process (MFCP). The system of fractional differential equations that governs its state probabilities is obtained using the Z transform method. Its one-dimensional distribution, mean, variance, covariance, probability generating function, and factorial moments are obtained. It is shown that the MFCP exhibits the long-range dependence property whereas its increment process has the short-range dependence property. As an application we consider a risk process in which the claims are modelled using the MFCP. For this risk process, we obtain an asymptotic behaviour of its finite-time ruin probability when the claim sizes are subexponentially distributed and the initial capital is arbitrarily large. Later, we discuss some distributional properties of a compound version of the GCP.","PeriodicalId":50256,"journal":{"name":"Journal of Applied Probability","volume":"26 6","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136262230","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Boolean percolation on digraphs and random exchange processes","authors":"Georg Braun","doi":"10.1017/jpr.2023.76","DOIUrl":"https://doi.org/10.1017/jpr.2023.76","url":null,"abstract":"Abstract We study in a general graph-theoretic formulation a long-range percolation model introduced by Lamperti [27]. For various underlying digraphs, we discuss connections between this model and random exchange processes. We clarify, for all $n in mathbb{N}$ , under which conditions the lattices $mathbb{N}_0^n$ and $mathbb{Z}^n$ are essentially covered in this model. Moreover, for all $n geq 2$ , we establish that it is impossible to cover the directed n -ary tree in our model.","PeriodicalId":50256,"journal":{"name":"Journal of Applied Probability","volume":"6 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134972398","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The unified extropy and its versions in classical and Dempster–Shafer theories","authors":"Francesco Buono, Yong Deng, Maria Longobardi","doi":"10.1017/jpr.2023.68","DOIUrl":"https://doi.org/10.1017/jpr.2023.68","url":null,"abstract":"Abstract Measures of uncertainty are a topic of considerable and growing interest. Recently, the introduction of extropy as a measure of uncertainty, dual to Shannon entropy, has opened up interest in new aspects of the subject. Since there are many versions of entropy, a unified formulation has been introduced to work with all of them in an easy way. Here we consider the possibility of defining a unified formulation for extropy by introducing a measure depending on two parameters. For particular choices of parameters, this measure provides the well-known formulations of extropy. Moreover, the unified formulation of extropy is also analyzed in the context of the Dempster–Shafer theory of evidence, and an application to classification problems is given.","PeriodicalId":50256,"journal":{"name":"Journal of Applied Probability","volume":"17 2","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135368312","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Aging notions, stochastic orders, and expected utilities","authors":"Jianping Yang, Weiwei Zhuang, Taizhong Hu","doi":"10.1017/jpr.2023.71","DOIUrl":"https://doi.org/10.1017/jpr.2023.71","url":null,"abstract":"Abstract There are some connections between aging notions, stochastic orders, and expected utilities. It is known that the DRHR (decreasing reversed hazard rate) aging notion can be characterized via the comparative statics result of risk aversion, and that the location-independent riskier order preserves monotonicity between risk premium and the Arrow–Pratt measure of risk aversion, and that the dispersive order preserves this monotonicity for the larger class of increasing utilities. Here, the aging notions ILR (increasing likelihood ratio), IFR (increasing failure rate), IGLR (increasing generalized likelihood ratio), and IGFR (increasing generalized failure rate) are characterized in terms of expected utilities. Based on these observations, we recover the closure properties of ILR, IFR, and DRHR under convolution, and of IGLR and IGFR under product, and investigate the closure properties of the dispersive order, location-independent riskier order, excess wealth order, the total time on test transform order under convolution, and the star order under product. We have some new findings.","PeriodicalId":50256,"journal":{"name":"Journal of Applied Probability","volume":"17 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135884256","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Resolving an old problem on the preservation of the IFR property under the formation of -out-of- systems with discrete distributions","authors":"Mahdi Alimohammadi, Jorge Navarro","doi":"10.1017/jpr.2023.63","DOIUrl":"https://doi.org/10.1017/jpr.2023.63","url":null,"abstract":"Abstract More than half a century ago, it was proved that the increasing failure rate (IFR) property is preserved under the formation of k -out-of- n systems (order statistics) when the lifetimes of the components are independent and have a common absolutely continuous distribution function. However, this property has not yet been proved in the discrete case. Here we give a proof based on the log-concavity property of the function $f({{mathrm{e}}}^x)$ . Furthermore, we extend this property to general distribution functions and general coherent systems under some conditions.","PeriodicalId":50256,"journal":{"name":"Journal of Applied Probability","volume":"234 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136113869","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Central limit theorem in complete feedback games","authors":"Andrea Ottolini, Raghavendra Tripathi","doi":"10.1017/jpr.2023.64","DOIUrl":"https://doi.org/10.1017/jpr.2023.64","url":null,"abstract":"Abstract Consider a well-shuffled deck of cards of n different types where each type occurs m times. In a complete feedback game, a player is asked to guess the top card from the deck. After each guess, the top card is revealed to the player and is removed from the deck. The total number of correct guesses in a complete feedback game has attracted significant interest in the past few decades. Under different regimes of m , n , the expected number of correct guesses, under the greedy (optimal) strategy, has been obtained by various authors, while there are not many results available about the fluctuations. In this paper we establish a central limit theorem with Berry–Esseen bounds when m is fixed and n is large. Our results extend to the case of decks where different types may have different multiplicity, under suitable assumptions.","PeriodicalId":50256,"journal":{"name":"Journal of Applied Probability","volume":"19 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136113217","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}