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Metabarcoding of Fish Larvae in the Merbok River Reveals Species Diversity and Distribution Along its Mangrove Environment. Merbok河中鱼类幼鱼的元条形码研究揭示了其红树林环境的物种多样性和分布。
IF 1.6 3区 生物学
Zoological Studies Pub Date : 2021-12-22 eCollection Date: 2021-01-01 DOI: 10.6620/ZS.2021.60-76
Norli Fauzani Mohd Abu Hassan Alshari, Siti Zuliana Ahmad, Azali Azlan, Youn-Ho Lee, Ghows Azzam, Siti Azizah Mohd Nor
{"title":"Metabarcoding of Fish Larvae in the Merbok River Reveals Species Diversity and Distribution Along its Mangrove Environment.","authors":"Norli Fauzani Mohd Abu Hassan Alshari,&nbsp;Siti Zuliana Ahmad,&nbsp;Azali Azlan,&nbsp;Youn-Ho Lee,&nbsp;Ghows Azzam,&nbsp;Siti Azizah Mohd Nor","doi":"10.6620/ZS.2021.60-76","DOIUrl":"https://doi.org/10.6620/ZS.2021.60-76","url":null,"abstract":"<p><p>The Merbok River (north-west of Peninsular Malaysia) is a mangrove estuary that provides habitat for over 100 species of fish, which are economically and ecologically important. Threats such as habitat loss and overfishing are becoming a great concern for fisheries conservation and management. The identification of larval fish in this estuarine system is important to complement information on the adults. This is because the data could inform the spawning behaviour, reproductive biology, selection of nursery grounds and migration route of fish. Such information is invaluable for fisheries and aquatic environmental monitoring, and thus for their conservation and management. However, identifying fish larvae is a challenging task based only on morphology and even traditional DNA barcoding. To address this, DNA metabarcoding was utilised to detect the diversity of fish in the Merbok River. To complete the study, the fish larvae were collected at six sampling sites of the river. The extracted larval DNA was amplified for the Cytochrome Oxidase subunit 1 (<i>COI</i>) and 12S ribosomal RNA (12S rRNA) genes based on the metabarcoding approach using shotgun sequencing on the next-generation sequencing (NGS) Illumina MiSeq platform. Eighty-nine species from 65 genera and 41 families were detected, with <i>Oryzias javanicus</i>, <i>Oryzias dancena</i>, <i>Lutjanus argentimaculatus</i> and <i>Lutjanus malabaricus</i> among the most common species. The lower diversity observed from previous morphological studies is suggested to be mainly due to seasonal variation over the sampling period between the two methods and limited 12S rRNA sequences in current databases. The metabarcode data and a validation Sanger sequencing step using 15 species-specific primer pairs detected three species in common: <i>Oryzias javanicus</i>, <i>Decapterus maruadsi</i> and <i>Pennahia macrocephalus</i>. Several discrepancies observed between the two molecular approaches could be attributed to contaminants during sampling and DNA extraction, which could mask the presence of target species, especially when DNA from the contaminants is more abundant than the target organisms. In conclusion, this rapid and cost-effective identification method using DNA metabarcoding allowed the detection of numerous fish species from bulk larval samples in the Merbok River. This method can be applied to other sites and other organisms of interest.</p>","PeriodicalId":49331,"journal":{"name":"Zoological Studies","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2021-12-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9169113/pdf/zoolstud-60-076.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40461350","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
High Mountain Echiniscid (Heterotardigrada) Fauna of Taiwan. 台湾高山棘虫(异步虫纲)区系。
IF 1.6 3区 生物学
Zoological Studies Pub Date : 2021-12-13 eCollection Date: 2021-01-01 DOI: 10.6620/ZS.2021.60-70
Piotr Gąsiorek, Katarzyna Vončina, Reinhardt Møbjerg Kristensen, Łukasz Michalczyk
{"title":"High Mountain Echiniscid (Heterotardigrada) Fauna of Taiwan.","authors":"Piotr Gąsiorek,&nbsp;Katarzyna Vončina,&nbsp;Reinhardt Møbjerg Kristensen,&nbsp;Łukasz Michalczyk","doi":"10.6620/ZS.2021.60-70","DOIUrl":"https://doi.org/10.6620/ZS.2021.60-70","url":null,"abstract":"<p><p>Taiwan lies at the transitional zone between the East Palaearctic and Oriental regions, which translates into both Palaearctic and Indomalayan taxa being present on the island. Furthermore, large habitat heterogeneity and high mountains contributed to the rise of conditions favouring allopatric speciation and the emergence of endemic species. The tardigrade fauna of Taiwan is poorly studied, and the aim of this contribution is to provide new data on the members of the family Echiniscidae, the largest limno-terrestrial group of the class Heterotardigrada, found at high elevations in central Taiwan. We report 11 species grouped in 5 genera: <i>Claxtonia</i> (1 species), <i>Echiniscus</i> (3 species), <i>Hypechiniscus</i> (1 species), <i>Nebularmis</i> (2 species), and <i>Pseudechiniscus</i> (4 species). All are new to Taiwan, including 5 species that are new to science, 4 or which are described herein by means of integrative taxonomy: <i>Hypechiniscus crassus</i> sp. nov. (the <i>exarmatus</i> morphogroup), <i>Pseudechiniscus</i> (<i>Meridioniscus</i>) <i>dreyeri</i> sp. nov., <i>Pseudechiniscus</i> (<i>Pseudechiniscus</i>) <i>formosus</i> sp. nov., and <i>Pseudechiniscus</i> (<i>Pseudechiniscus</i>) <i>totoro</i> sp. nov. The new findings also help to clarify the description of <i>Echiniscus clevelandi</i> Beasley, 1999, and supplement the phylogenies of the <i>Echiniscus virginicus</i> complex and of the genera <i>Hypechiniscus</i>, <i>Nebularmis</i> and <i>Pseudechiniscus</i>.</p>","PeriodicalId":49331,"journal":{"name":"Zoological Studies","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2021-12-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9169119/pdf/zoolstud-60-070.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40573550","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Quantifying the Effect of Land-cover Change on the Endangered Farmland Green Treefrog (Zhangixalus arvalis) in an Agricultural Landscape: Implications for Conservation. 量化农业景观中土地覆盖变化对濒危农田绿树蛙(Zhangixalus arvalis)的影响:对保护工作的启示。
IF 1.5 3区 生物学
Zoological Studies Pub Date : 2021-12-07 eCollection Date: 2021-01-01 DOI: 10.6620/ZS.2021.60-71
Sin Chen, Meng-Hsien Chuang, Hau-Jie Shiu, Jian-Nan Liu
{"title":"Quantifying the Effect of Land-cover Change on the Endangered Farmland Green Treefrog (<i>Zhangixalus arvalis</i>) in an Agricultural Landscape: Implications for Conservation.","authors":"Sin Chen, Meng-Hsien Chuang, Hau-Jie Shiu, Jian-Nan Liu","doi":"10.6620/ZS.2021.60-71","DOIUrl":"10.6620/ZS.2021.60-71","url":null,"abstract":"<p><p>Habitat loss and fragmentation have a significant negative effect on amphibian species, particularly those with specialized habitat requirements. The endangered farmland green treefrog (<i>Zhangixalus arvalis</i>) primarily inhabits woodlands of agricultural landscapes in central Taiwan. Recently, due to increased demands for pineapple products, many woodlands, particularly bamboo plantations, were converted to pineapple fields. This study aimed to quantify the effect of habitat loss and fragmentation on <i>Z. arvalis</i> due to changes in land cover in an agricultural landscape. The study area contained 34,243 50 m × 50 m grids. In 2006 and 2014-2015, we used acoustic surveys to survey the occurrence of <i>Z. arvalis</i> in each grid. We obtained satellite images of the study area for 2006 and 2014, and we assigned the land-cover type of each grid to one of the following six types: woodland, brushland, cropland, bareland, manmade structures and water body. We examined whether <i>Z. arvalis</i> preferred a certain land-cover type by comparing the proportion of cover types available and the proportion of cover types used by the frogs. Furthermore, we used occurrence records for 2006 and 2014-2015 and applied the Maximum Entropy Model to predict suitable habitat for the respective years. We mapped the loss of suitable habitat and used six indices to quantify habitat fragmentation within the 8 years. We also tested the prediction that the occupancy rate of <i>Z. arvalis</i> in different-sized habitat patches was a function of patch size. <i>Zhangixalus arvalis</i> exhibited a strong preference for woodland, but avoided cropland and manmade structures. From 2006 to 2014-2015, the suitable habitat decreased 4.1%, and all six indices showed an increase in habitat fragmentation. The occupancy rate of different-sized woodland patches was positively correlated with patch size. Mapping suitable habitat and identifying the potential gaps in functional habitat connectivity can be used to guide effective measures for conserving <i>Z. arvalis</i>.</p>","PeriodicalId":49331,"journal":{"name":"Zoological Studies","volume":null,"pages":null},"PeriodicalIF":1.5,"publicationDate":"2021-12-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9121362/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71330502","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Tolerance to Anhydrobiotic Conditions Among Two Coexisting Tardigrade Species Differing in Life Strategies. 两种生活策略不同的共存迟发型物种对非水生环境的耐受性
IF 1.5 3区 生物学
Zoological Studies Pub Date : 2021-12-07 eCollection Date: 2021-01-01 DOI: 10.6620/ZS.2021.60-74
Milena Roszkowska, Bartłomiej Gołdyn, Daria Wojciechowska, Jakub Z Kosicki, Edyta Fiałkowska, Hanna Kmita, Łukasz Kaczmarek
{"title":"Tolerance to Anhydrobiotic Conditions Among Two Coexisting Tardigrade Species Differing in Life Strategies.","authors":"Milena Roszkowska, Bartłomiej Gołdyn, Daria Wojciechowska, Jakub Z Kosicki, Edyta Fiałkowska, Hanna Kmita, Łukasz Kaczmarek","doi":"10.6620/ZS.2021.60-74","DOIUrl":"10.6620/ZS.2021.60-74","url":null,"abstract":"<p><p>Water availability is one of the most important factors for terrestrial life. Terrestrial habitats may periodically become dry, which can be overcome by an organism's capability to undergo anhydrobiosis. In animals, this phenomenon has been reported for invertebrates, with tardigrades being the best-known. However, different tardigrade species appear to significantly differ in their anhydrobiotic abilities. While several studies have addressed this issue, established experimental protocols for tardigrade dehydration differ both within and among species, leading to ambiguous results. Therefore, we apply unified conditions to estimate intra-and interspecies differences in anhydrobiosis ability reflected by the return to active life. We analysed <i>Milnesium inceptum</i> and <i>Ramazzottius subanomalus</i> representing predatory and herbivorous species, respectively, and often co-occur in the same habitat. The results indicated that the carnivorous <i>Mil. inceptum</i> displays better anhydrobiosis survivability than the herbivorous <i>Ram. subanomalus</i>. This tendency to some degree coincides with the time of \"waking up\" since <i>Mil. inceptum</i> showed first movements and full activity of any first individual later than <i>Ram. subanomalus</i>. The movements of all individuals were however observed to be faster for <i>Mil. inceptum</i>. Differences between the experimental groups varying in anhydrobiosis length were also observed: the longer tun state duration, the more time was necessary to return to activity.</p>","PeriodicalId":49331,"journal":{"name":"Zoological Studies","volume":null,"pages":null},"PeriodicalIF":1.5,"publicationDate":"2021-12-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9168880/pdf/zoolstud-60-074.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40461351","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular Identification of Mid to Final Stage Slipper Lobster Phyllosoma Larvae of the Genus Chelarctus (Crustacea: Decapoda: Scyllaridae) Collected in the Pacific with Descriptions of Their Larval Morphology. 太平洋螯虾属(甲壳纲:十足纲:鳞翅目)中后期叶状体幼虫的分子鉴定及幼虫形态描述。
IF 1.6 3区 生物学
Zoological Studies Pub Date : 2021-12-07 eCollection Date: 2021-01-01 DOI: 10.6620/ZS.2021.60-75
Kenta Ueda, Takashi Yanagimoto, Seinen Chow, Mari Kuroki, Takashi Yamakawa
{"title":"Molecular Identification of Mid to Final Stage Slipper Lobster Phyllosoma Larvae of the Genus <i>Chelarctus</i> (Crustacea: Decapoda: Scyllaridae) Collected in the Pacific with Descriptions of Their Larval Morphology.","authors":"Kenta Ueda,&nbsp;Takashi Yanagimoto,&nbsp;Seinen Chow,&nbsp;Mari Kuroki,&nbsp;Takashi Yamakawa","doi":"10.6620/ZS.2021.60-75","DOIUrl":"https://doi.org/10.6620/ZS.2021.60-75","url":null,"abstract":"<p><p>Morphological descriptions of phyllosoma larvae are essential for correct species identification and investigating the spatiotemporal distribution and recruitment process of spiny and slipper lobsters. Species identification of the phyllosoma larvae in the Scyllarinae subfamily is particularly difficult because of the morphological similarities among species and the scarcity of morphological information describing correct species identity. We extracted mid-to final-stage (V to VIII) phyllosoma larvae (<i>n</i> = 12) belonging to the subfamily Scyllarinae from several plankton samples collected in the Pacific and then performed molecular species identification using mitochondrial DNA <i>COI</i> and 16S rDNA sequence analyses. Three larvae collected around the Ryukyu Archipelago were identified as <i>Chelarctus aureus</i> (stage VI to VIII), and four collected around the Ryukyu Archipelago and Ogasawara Islands were identified as <i>C. virgosus</i> (V to VIII). One larva (V) collected in the central South Pacific was determined to be a subspecies of <i>C. crosnieri</i>. DNA barcodes could not be made for the remaining four larvae (V to VIII) collected around the Ryukyu Archipelago (designated by ?<i>Chelarctus</i> sp-1). Based on the morphological characteristics of the <i>C. virgosus</i> phyllosoma described in this study and the adult distributions reported to date, <i>C. cultrifer</i> phyllosomas previously reported in Japanese and Taiwanese waters are likely to be <i>C. virgosus</i>. This paper also presents a set of diagnostic morphological characteristics that can be used to discriminate among these four species of <i>Chelarctus</i> and from other genera in the subfamily Scyllarinae.</p>","PeriodicalId":49331,"journal":{"name":"Zoological Studies","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2021-12-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9169114/pdf/zoolstud-60-075.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40573552","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
A Soil Nematode Community Response to Reclamation of Salinized Abandoned Farmland. 土壤线虫群落对盐碱化废弃农田复垦的响应。
IF 1.5 3区 生物学
Zoological Studies Pub Date : 2021-12-07 eCollection Date: 2021-01-01 DOI: 10.6620/ZS.2021.60-72
Lei Yang, Fenghua Zhang, Yanqin Luo
{"title":"A Soil Nematode Community Response to Reclamation of Salinized Abandoned Farmland.","authors":"Lei Yang, Fenghua Zhang, Yanqin Luo","doi":"10.6620/ZS.2021.60-72","DOIUrl":"10.6620/ZS.2021.60-72","url":null,"abstract":"<p><p>Development from abandoned land to farmland after vegetation reestablishment for reclamation is an important salinization rehabilitation process in dryland ecosystems. While subsequent soil abiotic changes have been reported, few studies have focused on how reclamation affects the soil biota. Understanding the response of soil biota to reclamation is useful for evaluating the effect of agricultural management. We investigated soil physiochemical properties, the composition and structure of nematode communities, and nematode metabolic footprints in control and reclaimed farmland. The results showed that soil properties were significantly altered by reclamation. In particular, reclamation significantly increased pH, organic carbon, total nitrogen, and microbial biomass carbon. Conversely, electrical conductivity was significantly decreased. Shannon and Simpson indices were affected by reclamation. Reclamation significantly increased the Shannon index in the 10-20 cm soil layer. Reclamation significantly increased the Simpson index in the 0-10 cm soil layer, while the opposite was observed in the 10-20 cm soil layer. High basal index and fungal-based channel were found in the control. Total nematode abundance increased due to reclamation, which included fungivores, herbivores, and omnivores-predators. More nematodes could store more biomass carbon in the reclaimed farmland. Reclamation had an effect on the structure and function of soil food web, and increased the metabolic footprints of various trophic groups of nematodes. Nematode faunal analysis revealed that exogenous substances input led to the high level of communities structure, and the soil food web matured in the reclaimed farmland. The nematode communities were affected by reclamation. Furthermore, pH, EC, SOC, TN, and MBC were key driving factors affecting the nematode communities. Therefore, reclamation could effectively enhance the structure and function of soil food web through bottom-up effects in the cotton fields in Xinjiang, China.</p>","PeriodicalId":49331,"journal":{"name":"Zoological Studies","volume":null,"pages":null},"PeriodicalIF":1.5,"publicationDate":"2021-12-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9121361/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71330383","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bacterial Communities in Multiple Tissues Across the Body Surface of Three Coastal Shark Species. 三种海岸鲨鱼体表多种组织中的细菌群落。
IF 1.6 3区 生物学
Zoological Studies Pub Date : 2021-11-22 eCollection Date: 2021-01-01 DOI: 10.6620/ZS.2021.60-69
Chelsea Black, Liza Merly, Neil Hammerschlag
{"title":"Bacterial Communities in Multiple Tissues Across the Body Surface of Three Coastal Shark Species.","authors":"Chelsea Black,&nbsp;Liza Merly,&nbsp;Neil Hammerschlag","doi":"10.6620/ZS.2021.60-69","DOIUrl":"https://doi.org/10.6620/ZS.2021.60-69","url":null,"abstract":"<p><p>Bacteria are known to have explicit roles within the microbiomes of host tissues, therefore examining these communities may prove useful in assessing host health and responses to environmental change. The present study contributes to the emerging, yet understudied, field of microbiome research in elasmobranchs. We provide a screening of the culturable bacteria communities found on multiple tissue sites on the body surface of blacktip (<i>Carcharhinus limbatus</i>), bull (<i>Carcharhinus leucas</i>), and tiger (<i>Galeocerdo cuvier</i>) sharks near Miami, Florida. Tissue sites include mouth, gills, skin, and any visible wounds. The study adds to our understanding of the diversity of bacteria present on sharks in comparison to their natural environment. We also compare bacterial groups found within wounds in shark skin to healthy tissue sites on the same individual. Results indicate that wounds on an individual may allow for opportunistic bacteria to invade or overgrow where they would not normally be found, which may have potential health consequences for sharks that become wounded due to fishing practices. Identified bacteria belonged to the <i>Actinobacteria</i>, <i>Firmicutes</i>, and <i>Proteobacteria</i> phyla, known to be prominent bacterial groups associated with marine organisms. Results indicate shark species-specific differences in bacterial communities, including the presence of bacteria belonging to <i>Planococcaceae</i> exclusively on the skin of tiger sharks. To our knowledge, this is the first report of this family in any elasmobranch. While most tissue sites displayed commensal bacteria identified in similar studies, known pathogens belonging to <i>Vibrionaceae</i> and <i>Staphylococcaceae</i> were identified in the wounds of blacktip and bull sharks. Some bacteria may be normal residents, but the loss of protective dermal denticles due to a wound may allow colonization by pathogens. Continued research is needed to explore microbial communities associated with sharks and their influence on host health.</p>","PeriodicalId":49331,"journal":{"name":"Zoological Studies","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2021-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9168907/pdf/zoolstud-60-069.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40461349","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Multiple Environmental Factors Increase the Niche Complexity and Species Diversity of Brachyuran Crabs in an Intertidal Algal Reef Ecosystem in Northwestern Taiwan. 多种环境因素增加了台湾西北部潮间带藻礁生态系统中腕足动物的生态位复杂性和物种多样性
IF 1.5 3区 生物学
Zoological Studies Pub Date : 2021-11-19 eCollection Date: 2021-01-01 DOI: 10.6620/ZS.2021.60-73
Kun-Chang Li, Hung-Chang Liu, Hui-Chen Lin
{"title":"Multiple Environmental Factors Increase the Niche Complexity and Species Diversity of Brachyuran Crabs in an Intertidal Algal Reef Ecosystem in Northwestern Taiwan.","authors":"Kun-Chang Li, Hung-Chang Liu, Hui-Chen Lin","doi":"10.6620/ZS.2021.60-73","DOIUrl":"10.6620/ZS.2021.60-73","url":null,"abstract":"<p><p>Algal reefs are one of the world's rare and poorly understood ecosystems. They are mainly distributed in the Mediterranean Sea, but one notable exception-an intertidal algal reef ecosystem in northwestern Taiwan-stretches for 27 km along the coast of Taoyuan, making it probably the largest algal reef coast found in shallow water. Despite the reef's rarity and striking characteristics, the coastal land that it is part of has undergone a series of developments and is now surrounded by industrial parks. Brachyuran crabs are one of the most abundant and visible groups of organisms in the intertidal zone. In the present study, we investigated the brachyuran crab community in this reef to provide a more detailed record of brachyuran crab species compositions in this intertidal algal reef ecosystem and illustrate the characteristics of this understudied ecosystem by comparing its species diversity and abundance with three natural variables- sampling time, tidal level, and season-in a wildlife refuge and north of the refuge. Two methods were used in the study: a qualitative method (to determine the species richness) and a quantitative method (to estimate the population density). We identified a total of 52 brachyuran species from 13 families in the habitats. The highest species richness was found in Datan G2, north of the wildlife refuge. The crab species composition in this algal reef is different from its compositions in coral and rocky reefs. Our analysis indicated that the species abundance is affected by multiple factors, and a single investigation is not enough to reflect the true population density of brachyuran crabs on this reef. In addition, we found that the sites outside the wildlife refuge were in much better condition than those in the wildlife refuge, and should therefore be included in the wildlife refuge. In particular, Datan, located north of the wildlife refuge, had the highest species richness, and the area's species composition was different from that of the nearby wildlife refuge. Thus, we strongly recommend that a) the Datan area be protected to maintain this high crab diversity and b) further research be performed to better understand brachyuran crab biology in the intertidal algal reef ecosystem.</p>","PeriodicalId":49331,"journal":{"name":"Zoological Studies","volume":null,"pages":null},"PeriodicalIF":1.5,"publicationDate":"2021-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9121363/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71330427","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A New Species of the Intertidal Limpet Eoacmaea (Patellogastropoda: Eoacmaeidae) from Yonaguni Island, Japan and Taiwan. 日本和台湾与那国岛潮间带帽贝一新种(盘足纲:帽贝科)。
IF 1.6 3区 生物学
Zoological Studies Pub Date : 2021-11-19 eCollection Date: 2021-01-01 DOI: 10.6620/ZS.2021.60-68
Tomoyuki Nakano, Takenori Sasaki, Takeharu Kosuge, Benny K K Chan
{"title":"A New Species of the Intertidal Limpet <i>Eoacmaea</i> (Patellogastropoda: Eoacmaeidae) from Yonaguni Island, Japan and Taiwan.","authors":"Tomoyuki Nakano,&nbsp;Takenori Sasaki,&nbsp;Takeharu Kosuge,&nbsp;Benny K K Chan","doi":"10.6620/ZS.2021.60-68","DOIUrl":"https://doi.org/10.6620/ZS.2021.60-68","url":null,"abstract":"<p><p>A new species of intertidal limpet was identified from Yonaguni Island, Japan and southern Taiwan in the present study and described as <i>Eoacmaea nivea</i> n. sp. It was previously reported by different authors as <i>Cellana mauritiana</i>, or as Acmaeid sp. in Taiwan, and as <i>Patelloida</i> sp. in Yonaguni Island, Japan. Based on detailed morphological observations and molecular analyses (<i>COI</i>), <i>E. nivea</i> n. sp. is distinguished from other <i>Eoacmaea</i> species. <i>Eoacmaea nivea</i> n. sp. is presently known from southern Taiwan, and a population on Yonaguni Island, Japan that is very limited. The present study reports a total 11 species of patellogastropod limpet species in Taiwan. The seven species-<i>Cellana grata</i>, <i>Cellana toreuma</i>, <i>Nipponacmea nigrans</i>, <i>Nipponacmea fuscoviridis</i>, <i>Lottia dorsuosa</i>, <i>Lottia luchuana</i> and <i>Lottia tenuisculpta</i>-were found in the intertidal on rocky shores along the north to northeastern shores of Taiwan. The five species-<i>Cellana radiata</i>, <i>Lottia luchuana</i>, <i>Scutellastra flexuosa</i>, <i>Patelloida saccharina</i> and <i>E. nivea</i> n. sp.-can be found mostly within depressions in limestone substrate in southeastern Taiwan. Of these, only <i>Lottia luchuana</i> is found throughout Taiwan, and overall has a tropical, not warm-temperate, distribution.</p>","PeriodicalId":49331,"journal":{"name":"Zoological Studies","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2021-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9168901/pdf/zoolstud-60-068.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40461818","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dietary Habits of Free-ranging Banded Langur (Presbytis femoralis) in a Secondary-human Modified Forest in Johor, Malaysia. 马来西亚柔佛次级人类改良森林中散养带状叶猴的饮食习性。
IF 1.6 3区 生物学
Zoological Studies Pub Date : 2021-11-16 eCollection Date: 2021-01-01 DOI: 10.6620/ZS.2021.60-67
Mohd Faudzir Najmuddin, Hidayah Haris, Noratiqah Norazlimi, Farhani Ruslin, Ikki Matsuda, Badrul Munir Md-Zain, Muhammad Abu Bakar Abdul-Latiff
{"title":"Dietary Habits of Free-ranging Banded Langur (<i>Presbytis femoralis</i>) in a Secondary-human Modified Forest in Johor, Malaysia.","authors":"Mohd Faudzir Najmuddin,&nbsp;Hidayah Haris,&nbsp;Noratiqah Norazlimi,&nbsp;Farhani Ruslin,&nbsp;Ikki Matsuda,&nbsp;Badrul Munir Md-Zain,&nbsp;Muhammad Abu Bakar Abdul-Latiff","doi":"10.6620/ZS.2021.60-67","DOIUrl":"https://doi.org/10.6620/ZS.2021.60-67","url":null,"abstract":"<p><p>Banded langurs, <i>Presbytis femoralis</i>, are distributed in southern Peninsular Malaysia, <i>i.e.</i>, Johor and its borders including Singapore. It has been estimated that there are only < 250 mature individuals of <i>P. femoralis</i> in Malaysia and Singapore, and the species is currently considered Critically Endangered. The dietary information of <i>P. femoralis</i> and even other closely related species has rarely been reported. This study, therefore, aimed to describe the species dietary habits and discuss interaction between their feeding behaviour and its surrounding. This study was conducted from February to November 2018, with 15 sampling days each month. We collected a total of 186 sighting hours, using a scan sampling method with 10-min intervals, on a five-langur focal group. We identified 29 species based on 47 items consumed by the banded langur, mostly young leaves (51%) followed by fruits (45%), and flowers (3.8%). The study group spent slightly more time consuming non-cultivated plants but relied on cultivated plants for the fruits. Over 75% of fruit feeding involved consuming cultivar plants; in most cases (73%), they ate only the pulp, not the seeds. Since the cultivated plants were planted in human settlement, there is an urgent need to implement conservation measures to untangle the human-langur conflicts-for instance, reforestation of a buffer region using non-cultivated plants. There is a potential to build upon our new findings with more detailed investigations, such as more extensive ecological factors influencing the dietary adaptation which would be necessary to support conservation efforts and management decisions of this species.</p>","PeriodicalId":49331,"journal":{"name":"Zoological Studies","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2021-11-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9168899/pdf/zoolstud-60-067.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40460930","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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