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Germline-related molecular phenotype in Metazoa: conservation and innovation highlighted by comparative transcriptomics. 后生动物的种系相关分子表型:比较转录组学强调的保护和创新。
IF 4.1 2区 生物学
Evodevo Pub Date : 2023-01-30 DOI: 10.1186/s13227-022-00207-3
Giovanni Piccinini, Liliana Milani
{"title":"Germline-related molecular phenotype in Metazoa: conservation and innovation highlighted by comparative transcriptomics.","authors":"Giovanni Piccinini,&nbsp;Liliana Milani","doi":"10.1186/s13227-022-00207-3","DOIUrl":"https://doi.org/10.1186/s13227-022-00207-3","url":null,"abstract":"<p><strong>Background: </strong>In Metazoa, the germline represents the cell lineage devoted to the transmission of genetic heredity across generations. Its functions intuitively evoke the crucial roles that it plays in organism development and species evolution, and its establishment is tightly tied to animal multicellularity itself. The molecular toolkit expressed in germ cells has a high degree of conservation between species, and it also shares many components with the molecular phenotype of some animal totipotent cell lineages, like planarian neoblasts and sponge archaeocytes. The present study stems from these observations and represents a transcriptome-wide comparative analysis between germline-related samples of 9 animal species (7 phyla), comprehending also totipotent lineages classically considered somatic.</p><p><strong>Results: </strong>Differential expression analyses were performed for each species between germline-related and control somatic tissues. We then compared the different germline-related transcriptional profiles across the species without the need for an a priori set of genes. Through a phylostratigraphic analysis, we observed that the proportion of phylum- and Metazoa-specific genes among germline-related upregulated transcripts was lower than expected by chance for almost all species. Moreover, homologous genes related to proper DNA replication resulted the most common when comparing the considered species, while the regulation of transcription and post-transcriptional mechanisms appeared more variable, showing shared upregulated functions and domains, but very few homologous whole-length sequences.</p><p><strong>Conclusions: </strong>Our wide-scale comparative analysis mostly confirmed previous molecular characterizations of specific germline-related lineages. Additionally, we observed a consistent signal throughout the whole data set, therefore comprehending both canonically defined germline samples (germ cells), and totipotent cell lineages classically considered somatic (neoblasts and archaeocytes). The phylostratigraphic analysis supported the less probable involvement of novel molecular factors in the germline-related transcriptional phenotype and highlighted the early origin of such cell programming and its conservation throughout evolution. Moreover, the fact that the mostly shared molecular factors were involved in DNA replication and repair suggests how fidelity in genetic material inheritance is a strong and conserved driver of germline-related molecular phenotype, while transcriptional and post-transcriptional regulations appear differently tuned among the lineages.</p>","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":"14 1","pages":"2"},"PeriodicalIF":4.1,"publicationDate":"2023-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9885605/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9152682","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
East African cichlid fishes. 东非慈鲷
IF 4.1 2区 生物学
Evodevo Pub Date : 2023-01-05 DOI: 10.1186/s13227-022-00205-5
M Emília Santos, João F Lopes, Claudius F Kratochwil
{"title":"East African cichlid fishes.","authors":"M Emília Santos, João F Lopes, Claudius F Kratochwil","doi":"10.1186/s13227-022-00205-5","DOIUrl":"10.1186/s13227-022-00205-5","url":null,"abstract":"<p><p>Cichlid fishes are a very diverse and species-rich family of teleost fishes that inhabit lakes and rivers of India, Africa, and South and Central America. Research has largely focused on East African cichlids of the Rift Lakes Tanganyika, Malawi, and Victoria that constitute the biodiversity hotspots of cichlid fishes. Here, we give an overview of the study system, research questions, and methodologies. Research on cichlid fishes spans many disciplines including ecology, evolution, physiology, genetics, development, and behavioral biology. In this review, we focus on a range of organismal traits, including coloration phenotypes, trophic adaptations, appendages like fins and scales, sensory systems, sex, brains, and behaviors. Moreover, we discuss studies on cichlid phylogenies, plasticity, and general evolutionary patterns, ranging from convergence to speciation rates and the proximate and ultimate mechanisms underlying these processes. From a methodological viewpoint, the last decade has brought great advances in cichlid fish research, particularly through the advent of affordable deep sequencing and advances in genetic manipulations. The ability to integrate across traits and research disciplines, ranging from developmental biology to ecology and evolution, makes cichlid fishes a fascinating research system.</p>","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":"14 1","pages":"1"},"PeriodicalIF":4.1,"publicationDate":"2023-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814215/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10494184","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Flower-like meristem conditions and spatial constraints shape architecture of floral pseudanthia in Apioideae. 花状分生组织条件和空间约束决定了菊科花假蜂的结构。
IF 4.1 2区 生物学
Evodevo Pub Date : 2022-12-19 DOI: 10.1186/s13227-022-00204-6
Jakub Baczyński, Ferhat Celep, Krzysztof Spalik, Regine Claßen-Bockhoff
{"title":"Flower-like meristem conditions and spatial constraints shape architecture of floral pseudanthia in Apioideae.","authors":"Jakub Baczyński,&nbsp;Ferhat Celep,&nbsp;Krzysztof Spalik,&nbsp;Regine Claßen-Bockhoff","doi":"10.1186/s13227-022-00204-6","DOIUrl":"https://doi.org/10.1186/s13227-022-00204-6","url":null,"abstract":"<p><strong>Background: </strong>Pseudanthia are multiflowered units that resemble single flowers, frequently by association with pseudocorollas formed by enlarged peripheral florets (ray flowers). Such resemblance is not only superficial, because numerous pseudanthia originate from peculiar reproductive meristems with flower-like characteristics, i.e. floral unit meristems (FUMs). Complex FUM-derived pseudanthia with ray flowers are especially common in Apiaceae, but our knowledge about their patterning is limited. In this paper, we aimed to investigate both the genetic and morphological basis of their development.</p><p><strong>Results: </strong>We analysed umbel morphogenesis with SEM in six species representing four clades of Apiaceae subfamily Apioideae with independently acquired floral pseudanthia. Additionally, using in situ hybridization, we investigated expression patterns of LEAFY (LFY), UNUSUAL FLORAL ORGANS (UFO), and CYCLOIDEA (CYC) during umbel development in carrot (Daucus carota subsp. carota). Here, we show that initial differences in size and shape of umbel meristems influence the position of ray flower formation, whereas an interplay between peripheral promotion and spatial constraints in umbellet meristems take part in the establishment of specific patterns of zygomorphy in ray flowers of Apiaceae. This space-dependent patterning results from flower-like morphogenetic traits of the umbel which are also visible at the molecular level. Transcripts of DcLFY are uniformly distributed in the incipient umbel, umbellet and flower meristems, while DcCYC shows divergent expression in central and peripheral florets.</p><p><strong>Conclusions: </strong>Our results indicate that umbels develop from determinate reproductive meristems with flower-like characteristics, which supports their recognition as floral units. The great architectural diversity and complexity of pseudanthia in Apiaceae can be explained by the unique conditions of FUMs-an interplay between expression of regulatory genes, specific spatio-temporal ontogenetic constraints and morphogenetic gradients arising during expansion and repetitive fractionation. Alongside Asteraceae, umbellifers constitute an interesting model for investigation of patterning in complex pseudanthia.</p>","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":"13 1","pages":"19"},"PeriodicalIF":4.1,"publicationDate":"2022-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9764545/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9183908","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Adenylate cyclase A amplification and functional diversification during Polyspondylium pallidum development. 苍白球发育过程中腺苷酸环化酶A的扩增和功能多样化。
IF 4.1 2区 生物学
Evodevo Pub Date : 2022-10-19 DOI: 10.1186/s13227-022-00203-7
Yoshinori Kawabe, Pauline Schaap
{"title":"Adenylate cyclase A amplification and functional diversification during Polyspondylium pallidum development.","authors":"Yoshinori Kawabe,&nbsp;Pauline Schaap","doi":"10.1186/s13227-022-00203-7","DOIUrl":"https://doi.org/10.1186/s13227-022-00203-7","url":null,"abstract":"<p><strong>Background: </strong>In Dictyostelium discoideum (Ddis), adenylate cyclase A (ACA) critically generates the cAMP oscillations that coordinate aggregation and morphogenesis. Unlike group 4 species like Ddis, other groups do not use extracellular cAMP to aggregate. However, deletion of cAMP receptors (cARs) or extracellular phosphodiesterase (PdsA) in Polyspondylium pallidum (Ppal, group 2) blocks fruiting body formation, suggesting that cAMP oscillations ancestrally control post-aggregative morphogenesis. In group 2, the acaA gene underwent several duplications. We deleted the three Ppal aca genes to identify roles for either gene and tested whether Ppal shows transient cAMP-induced cAMP accumulation, which underpins oscillatory cAMP signalling.</p><p><strong>Results: </strong>In contrast to Ddis, pre-aggregative Ppal cells did not produce a pulse of cAMP upon stimulation with the cAR agonist 2'H-cAMP, but acquired this ability after aggregation. Deletion of Ppal aca1, aca2 and aca3 yielded different phenotypes. aca1- cells showed relatively thin stalks, aca2- showed delayed secondary sorogen formation and aca3- formed less aggregation centers. The aca1-aca2- and aca1-aca3- mutants combined individual defects, while aca2-aca3- and aca1-aca3-aca2- additionally showed > 24 h delay in aggregation, with only few aggregates with fragmenting streams being formed. The fragments developed into small fruiting bodies with stalk and spore cells. Aggregation was restored in aca2-aca3- and aca1-aca3-aca2- by 2.5 mM 8Br-cAMP, a membrane-permeant activator of cAMP-dependent protein kinase (PKA). Like Ddis, Ppal sorogens also express the adenylate cyclases ACR and ACG. We found that prior to aggregation, Ddis aca-/ACG cells produced a pulse of cAMP upon stimulation with 2'H-cAMP, indicating that cAMP oscillations may not be dependent on ACA alone.</p><p><strong>Conclusions: </strong>The three Ppal replicates of acaA perform different roles in stalk morphogenesis, secondary branch formation and aggregation, but act together to enable development by activating PKA. While even an aca1-aca3-aca2- mutant still forms (some) fruiting bodies, suggesting little need for ACA-induced cAMP oscillations in this process, we found that ACG also mediated transient cAMP-induced cAMP accumulation. It, therefore, remains likely that post-aggregative Ppal morphogenesis is organized by cAMP oscillations, favouring a previously proposed model, where cAR-regulated cAMP hydrolysis rather than its synthesis dominates oscillatory behaviour.</p>","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":" ","pages":"18"},"PeriodicalIF":4.1,"publicationDate":"2022-10-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9583560/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40555699","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Brachiopod and mollusc biomineralisation is a conserved process that was lost in the phoronid-bryozoan stem lineage. 腕足动物和软体动物的生物矿化是一个保守的过程,在栉虫-苔藓虫茎系中丢失了。
IF 4.1 2区 生物学
Evodevo Pub Date : 2022-09-19 DOI: 10.1186/s13227-022-00202-8
Joel Vikberg Wernström, Ludwik Gąsiorowski, Andreas Hejnol
{"title":"Brachiopod and mollusc biomineralisation is a conserved process that was lost in the phoronid-bryozoan stem lineage.","authors":"Joel Vikberg Wernström,&nbsp;Ludwik Gąsiorowski,&nbsp;Andreas Hejnol","doi":"10.1186/s13227-022-00202-8","DOIUrl":"https://doi.org/10.1186/s13227-022-00202-8","url":null,"abstract":"<p><strong>Background: </strong>Brachiopods and molluscs are lophotrochozoans with hard external shells which are often believed to have evolved convergently. While palaeontological data indicate that both groups are descended from biomineralising Cambrian ancestors, the closest relatives of brachiopods, phoronids and bryozoans, are mineralised to a much lower extent and are comparatively poorly represented in the Palaeozoic fossil record. Although brachiopod and mollusc shells are structurally analogous, genomic and proteomic evidence indicates that their formation involves a complement of conserved, orthologous genes. Here, we study a set of genes comprised of 3 homeodomain transcription factors, one signalling molecule and 6 structural proteins which are implicated in mollusc and brachiopod shell formation, search for their orthologs in transcriptomes or genomes of brachiopods, phoronids and bryozoans, and present expression patterns of 8 of the genes in postmetamorphic juveniles of the rhynchonelliform brachiopod T. transversa.</p><p><strong>Results: </strong>Transcriptome and genome searches for the 10 target genes in the brachiopods Terebratalia transversa, Lingula anatina, Novocrania anomala, the bryozoans Bugula neritina and Membranipora membranacea, and the phoronids Phoronis australis and Phoronopsis harmeri resulted in the recovery of orthologs of the majority of the genes in all taxa. While the full complement of genes was present in all brachiopods with a single exception in L. anatina, a bloc of four genes could consistently not be retrieved from bryozoans and phoronids. The genes engrailed, distal-less, ferritin, perlucin, sp1 and sp2 were shown to be expressed in the biomineralising mantle margin of T. transversa juveniles.</p><p><strong>Conclusions: </strong>The gene expression patterns we recovered indicate that while mineralised shells in brachiopods and molluscs are structurally analogous, their formation builds on a homologous process that involves a conserved complement of orthologous genes. Losses of some of the genes related to biomineralisation in bryozoans and phoronids indicate that loss of the capacity to form mineralised structures occurred already in the phoronid-bryozoan stem group and supports the idea that mineralised skeletons evolved secondarily in some of the bryozoan subclades.</p>","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":" ","pages":"17"},"PeriodicalIF":4.1,"publicationDate":"2022-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9484238/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40371394","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Daphnia as a versatile model system in ecology and evolution. 水蚤在生态学和进化中的多用途模式系统。
IF 4.1 2区 生物学
Evodevo Pub Date : 2022-08-08 DOI: 10.1186/s13227-022-00199-0
Dieter Ebert
{"title":"Daphnia as a versatile model system in ecology and evolution.","authors":"Dieter Ebert","doi":"10.1186/s13227-022-00199-0","DOIUrl":"https://doi.org/10.1186/s13227-022-00199-0","url":null,"abstract":"<p><p>Water fleas of the genus Daphnia have been a model system for hundreds of years and is among the best studied ecological model organisms to date. Daphnia are planktonic crustaceans with a cyclic parthenogenetic life-cycle. They have a nearly worldwide distribution, inhabiting standing fresh- and brackish water bodies, from small temporary pools to large lakes. Their predominantly asexual reproduction allows for the study of phenotypes excluding genetic variation, enabling us to separate genetic from non-genetic effects. Daphnia are often used in studies related to ecotoxicology, predator-induced defence, host-parasite interactions, phenotypic plasticity and, increasingly, in evolutionary genomics. The most commonly studied species are Daphnia magna and D. pulex, for which a rapidly increasing number of genetic and genomic tools are available. Here, I review current research topics, where the Daphnia model system plays a critical role.</p>","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":" ","pages":"16"},"PeriodicalIF":4.1,"publicationDate":"2022-08-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9360664/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40596191","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 38
Characterizing Hox genes in mayflies (Ephemeroptera), with Hexagenia limbata as a new mayfly model. 蜉蝣目蜉蝣中Hox基因的研究,并以limbata为新的蜉蝣模型。
IF 4.1 2区 生物学
Evodevo Pub Date : 2022-07-27 DOI: 10.1186/s13227-022-00200-w
Christopher J Gonzalez, Tobias R Hildebrandt, Brigid O'Donnell
{"title":"Characterizing Hox genes in mayflies (Ephemeroptera), with Hexagenia limbata as a new mayfly model.","authors":"Christopher J Gonzalez,&nbsp;Tobias R Hildebrandt,&nbsp;Brigid O'Donnell","doi":"10.1186/s13227-022-00200-w","DOIUrl":"https://doi.org/10.1186/s13227-022-00200-w","url":null,"abstract":"<p><strong>Background: </strong>Hox genes are key regulators of appendage development in the insect body plan. The body plan of mayfly (Ephemeroptera) nymphs differs due to the presence of abdominal appendages called gills. Despite mayflies' phylogenetic position in Paleoptera and novel morphology amongst insects, little is known of their developmental genetics, such as the appendage-regulating Hox genes. To address this issue we present an annotated, early instar transcriptome and embryonic expression profiles for Antennapedia, Ultrabithorax, and Abdominal A proteins in the mayfly Hexagenia limbata, identify putative Hox protein sequences in the mayflies H. limbata, Cloeon dipterum, and Ephemera danica, and describe the genomic organization of the Hox gene cluster in E. danica.</p><p><strong>Results: </strong>Transcriptomic sequencing of early instar H. limbata nymphs yielded a high-quality assembly of 83,795 contigs, of which 22,975 were annotated against Folsomia candida, Nilaparvata lugens, Zootermopsis nevadensis and UniRef90 protein databases. Homeodomain protein phylogeny and peptide annotations identified coding sequences for eight of the ten canonical Hox genes (excluding zerknüllt/Hox3 and fushi tarazu) in H. limbata and C. dipterum, and all ten in E. danica. Mayfly Hox protein sequences and embryonic expression patterns of Antp, Ubx, and Abd-A appear highly conserved with those seen in other non-holometabolan insects. Similarly, the genomic organization of the Hox cluster in E. danica resembles that seen in most insects.</p><p><strong>Conclusions: </strong>We present evidence that mayfly Hox peptide sequences and the embryonic expression patterns for Antp, Ubx, and Abd-A are extensively conserved with other insects, as is organization of the mayfly Hox gene cluster. The protein data suggest mayfly Antp, Ubx, and Abd-A play appendage promoting and repressing roles during embryogenesis in the thorax and abdomen, respectively, as in other insects. The identified expression of eight Hox genes, including Ubx and abd-A, in early instar nymphs further indicates a post-embryonic role, possibly in gill development. These data provide a basis for H. limbata as a complementary Ephemeridae model to the growing repertoire of mayfly model species and molecular techniques.</p>","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":" ","pages":"15"},"PeriodicalIF":4.1,"publicationDate":"2022-07-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9331126/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40662125","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The red flour beetle T. castaneum: elaborate genetic toolkit and unbiased large scale RNAi screening to study insect biology and evolution. 红粉甲虫:精细的遗传工具箱和无偏的大规模RNAi筛选研究昆虫生物学和进化。
IF 4.1 2区 生物学
Evodevo Pub Date : 2022-07-19 DOI: 10.1186/s13227-022-00201-9
Martin Klingler, Gregor Bucher
{"title":"The red flour beetle T. castaneum: elaborate genetic toolkit and unbiased large scale RNAi screening to study insect biology and evolution.","authors":"Martin Klingler,&nbsp;Gregor Bucher","doi":"10.1186/s13227-022-00201-9","DOIUrl":"https://doi.org/10.1186/s13227-022-00201-9","url":null,"abstract":"<p><p>The red flour beetle Tribolium castaneum has emerged as an important insect model system for a variety of topics. With respect to studying gene function, it is second only to the vinegar fly D. melanogaster. The RNAi response in T. castaneum is exceptionally strong and systemic, and it appears to target all cell types and processes. Uniquely for emerging model organisms, T. castaneum offers the opportunity of performing time- and cost-efficient large-scale RNAi screening, based on commercially available dsRNAs targeting all genes, which are simply injected into the body cavity. Well established transgenic and genome editing approaches are met by ease of husbandry and a relatively short generation time. Consequently, a number of transgenic tools like UAS/Gal4, Cre/Lox, imaging lines and enhancer trap lines are already available. T. castaneum has been a genetic experimental system for decades and now has become a workhorse for molecular and reverse genetics as well as in vivo imaging. Many aspects of development and general biology are more insect-typical in this beetle compared to D. melanogaster. Thus, studying beetle orthologs of well-described fly genes has allowed macro-evolutionary comparisons in developmental processes such as axis formation, body segmentation, and appendage, head and brain development. Transgenic approaches have opened new ways for in vivo imaging. Moreover, this emerging model system is the first choice for research on processes that are not represented in the fly, or are difficult to study there, e.g. extraembryonic tissues, cryptonephridial organs, stink gland function, or dsRNA-based pesticides.</p>","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":" ","pages":"14"},"PeriodicalIF":4.1,"publicationDate":"2022-07-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9295526/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40520384","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 12
Comparisons of cell proliferation and cell death from tornaria larva to juvenile worm in the hemichordate Schizocardium californicum 加利福尼亚裂心虫(Schizocardium californicum)半足虫幼虫与幼虫细胞增殖和细胞死亡的比较
IF 4.1 2区 生物学
Evodevo Pub Date : 2022-06-06 DOI: 10.1186/s13227-022-00198-1
Bump, Paul, Khariton, Margarita, Stubbert, Clover, Moyen, Nicole E., Yan, Jia, Wang, Bo, Lowe, Christopher J.
{"title":"Comparisons of cell proliferation and cell death from tornaria larva to juvenile worm in the hemichordate Schizocardium californicum","authors":"Bump, Paul, Khariton, Margarita, Stubbert, Clover, Moyen, Nicole E., Yan, Jia, Wang, Bo, Lowe, Christopher J.","doi":"10.1186/s13227-022-00198-1","DOIUrl":"https://doi.org/10.1186/s13227-022-00198-1","url":null,"abstract":"There are a wide range of developmental strategies in animal phyla, but most insights into adult body plan formation come from direct-developing species. For indirect-developing species, there are distinct larval and adult body plans that are linked together by metamorphosis. Some outstanding questions in the development of indirect-developing organisms include the extent to which larval tissue undergoes cell death during the process of metamorphosis and when and where the tissue that will give rise to the adult originates. How do the processes of cell division and cell death redesign the body plans of indirect developers? In this study, we present patterns of cell proliferation and cell death during larval body plan development, metamorphosis, and adult body plan formation, in the hemichordate Schizocardium californium (Cameron and Perez in Zootaxa 3569:79–88, 2012) to answer these questions. We identified distinct patterns of cell proliferation between larval and adult body plan formation of S. californicum. We found that some adult tissues proliferate during the late larval phase prior to the start of overt metamorphosis. In addition, using an irradiation and transcriptomic approach, we describe a genetic signature of proliferative cells that is shared across the life history states, as well as markers that are unique to larval or juvenile states. Finally, we observed that cell death is minimal in larval stages but begins with the onset of metamorphosis. Cell proliferation during the development of S. californicum has distinct patterns in the formation of larval and adult body plans. However, cell death is very limited in larvae and begins during the onset of metamorphosis and into early juvenile development in specific domains. The populations of cells that proliferated and gave rise to the larvae and juveniles have a genetic signature that suggested a heterogeneous pool of proliferative progenitors, rather than a set-aside population of pluripotent cells. Taken together, we propose that the gradual morphological transformation of S. californicum is mirrored at the cellular level and may be more representative of the development strategies that characterize metamorphosis in many metazoan animals.","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":"20 1","pages":""},"PeriodicalIF":4.1,"publicationDate":"2022-06-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138536634","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Distal-less and spalt are distal organisers of pierid wing patterns 无远端和裂端是远端组织者的梨形翼图案
IF 4.1 2区 生物学
Evodevo Pub Date : 2022-06-03 DOI: 10.1186/s13227-022-00197-2
Jocelyn Liang Qi Wee, Tirtha Das Banerjee, Anupama Prakash, K. Seah, A. Monteiro
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引用次数: 3
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