Fruit Growing Research最新文献

{"title":"Identification of microRNAs and target genes in apple (&lt;i&gt;Malus domestica&lt;/i&gt;) scion and rootstock with grafted interstock","authors":"Qingshan Li, Yuan Gao, Kun Wang, Simiao Sun, Xiang Lu, Zhao Liu, Guangyi Wang, Lin Wang, Zichen Li, Hanxin Guo, Lianwen Li, Jianrong Feng, Dajiang Wang","doi":"10.48130/frures-2023-0034","DOIUrl":"https://doi.org/10.48130/frures-2023-0034","url":null,"abstract":"Apple (<italic>Malus domestica</italic>) is an important multi-functional horticultural crop. However, thus far, there have been few reports concerning the molecular mechanism by which interstock regulates rootstock and scion growth. MicroRNAs (miRNAs) are a type of post-transcriptional regulator that regulates apple growth and development, fruit quality, hormone signal transduction, and stress response. Interstock grafting resulted in differences in miRNA distribution between apple tissues. The regulatory roles of miRNAs in the grafting of apples are not yet clear. In this study, 15 libraries were constructed using the phloem of an apple grafted on two types of interstock and rootstock by high-throughput sequencing. A total of 281 miRNAs were catalogued into 80 families, and 159 novel ones were identified. Compared with the control, the grafting combination with the interstock resulted in 79 differentially expressed miRNAs (DEMs) in the scion, with 36 up-regulated and 43 down-regulated miRNAs, and 57 DEMs in the rootstock, including 22 up-regulated and 35 down-regulated miRNAs. Grafting with the dwarfing interstock led to DEMs in the whole plant, including a decrease in the expression of mdm-miR156 in the scion and mdm-miR172 in the rootstock. Predictive analysis of the DEMs and their target genes suggested that miRNAs mediate scion growth through several aspects, such as plant hormone synthesis and signal transduction, and nutrient absorption and balance. Through combined miRNA and mRNA analysis, the dwarfing effect of the interstock may affect the expression of genes related to the starch and sucrose metabolism pathways in the rootstock and the plant hormone signal transduction pathway in the scion. The available evidence facilitates a better understanding of the role of miRNAs in the response of apples after grafting interstock. One possible reason for the stunting of apple trees and the promotion of early flowering caused by the dwarfing interstock is the decrease in expression levels of mdm-miR156 and mdm-miR172.","PeriodicalId":37667,"journal":{"name":"Fruit Growing Research","volume":"70 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136367763","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Long-distance genome editing in grafted plants using tRNA like sequence and CRISPR/Cas9 system","authors":"Juxun Wu","doi":"10.48130/frures-2023-0005","DOIUrl":"https://doi.org/10.48130/frures-2023-0005","url":null,"abstract":"","PeriodicalId":37667,"journal":{"name":"Fruit Growing Research","volume":"28 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"72893211","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Pool-seq of diverse apple germplasm reveals candidate loci underlying ripening time, phenolic content, and softening","authors":"T. Davies, S. Myles","doi":"10.48130/frures-2023-0011","DOIUrl":"https://doi.org/10.48130/frures-2023-0011","url":null,"abstract":"","PeriodicalId":37667,"journal":{"name":"Fruit Growing Research","volume":"14 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84291003","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Transcriptome analysis revealed MAPK and hormone pathway involving in exogenous melatonin-regulated salt tolerance in sour jujube","authors":"Wenhui Zhu, Haonan Cao, Qingfang Wang, Yahong Niu, Ehsan Sadeghnezhad, Shoukun Han, Mengjun Liu, Lixin Wang, Zhiguo Liu","doi":"10.48130/frures-2023-0019","DOIUrl":"https://doi.org/10.48130/frures-2023-0019","url":null,"abstract":"","PeriodicalId":37667,"journal":{"name":"Fruit Growing Research","volume":"102 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"85825546","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Transcriptional co-regulation of anthocyanin accumulation and acidity in fruits","authors":"Ahmed Alabd, Junbei Ni, Songling Bai, Yuanwen Teng","doi":"10.48130/frures-0023-0041","DOIUrl":"https://doi.org/10.48130/frures-0023-0041","url":null,"abstract":"Color and acidity, two important fruit quality traits, greatly influence consumer choice and market competitiveness. They result from the accumulation of anthocyanins and organic acids in the vacuole. A shift in the vacuolar pH, caused by the accumulation of organic acids, leads to a change in the absorption spectrum of anthocyanins, and thus to changes in the color of tissues, suggesting a possible relationship between these two traits. Thus, the discovery of the molecular co-mechanism responsible for these processes is one of the most challenging for improving fruit quality traits and ultimately increasing market value. Here, we review current knowledge on the relationship between anthocyanin accumulation and acidity, and highlight recent advances in the roles of TFs in regulating these quality traits via transcriptional co-regulation of different gene associated with anthocyanin accumulation and acidity for fruit quality improvement.","PeriodicalId":37667,"journal":{"name":"Fruit Growing Research","volume":"80 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135611624","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Large-scale apple GWAS reveals &lt;i&gt;NAC18.1&lt;/i&gt; as a master regulator of ripening traits","authors":"Sophie Watts, Zoë Migicovsky, Sean Myles","doi":"10.48130/frures-2023-0032","DOIUrl":"https://doi.org/10.48130/frures-2023-0032","url":null,"abstract":"Apple quality traits such as fruit texture, sugar content, and firmness retention during storage are key targets for breeders. Understanding the genetic control of fruit quality traits can enable the development of genetic markers, useful for marker-assisted breeding of new apple cultivars. We made use of over 260,000 single nucleotide polymorphisms (SNPs) genotyped across 1,054 apple accessions from Canada's Apple Biodiversity Collection to perform genome-wide association for 21 fruit quality and phenology traits. We identified two loci on chromosome 15 and 16 associated with phenolic content and a locus on chromosome 10 associated with softening. In addition, we determined that allelic variation at the <italic>NAC18.1</italic> transcription factor was associated with numerous traits including harvest date, firmness at harvest, and firmness after storage. Our analyses suggest that <italic>NAC18.1</italic> independently acts as a high level regulator of multiple ripening related traits and we propose a model for the allelic effects at <italic>NAC18.1</italic> on apple ripening and softening.","PeriodicalId":37667,"journal":{"name":"Fruit Growing Research","volume":"26 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135701457","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Ethylene accelerates grape ripening via increasing VvERF75-induced ethylene synthesis and chlorophyll degradation","authors":"Zhiqian Li, Chao-Xi Chen, Dongfang Zou, Jingwen Li, Yingying Huang, Xianbo Zheng, B. Tan, Jun Cheng, W. Wang, Langlang Zhang, Xia Ye, Jiancan Feng","doi":"10.48130/frures-2023-0003","DOIUrl":"https://doi.org/10.48130/frures-2023-0003","url":null,"abstract":"","PeriodicalId":37667,"journal":{"name":"Fruit Growing Research","volume":"23 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79114154","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Vacuole: A repository to control fruit flavor quality","authors":"Ziyan Liu, Z. Mao, Mengdi Li, Changle Cai, Yue Wang, Ji-Hong Liu, Chunlong Li","doi":"10.48130/frures-2023-0012","DOIUrl":"https://doi.org/10.48130/frures-2023-0012","url":null,"abstract":"","PeriodicalId":37667,"journal":{"name":"Fruit Growing Research","volume":"1 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89217750","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Genome-wide identification and expression pattern analysis of the &lt;i&gt;ACS&lt;/i&gt; gene family during fruit development in peach","authors":"Xiaofei Wang, Kang Dong, Jun Cheng, Bin Tan, Xianbo Zheng, Xia Ye, Wei Wang, Langlang Zhang, Jiancan Feng","doi":"10.48130/frures-0023-0040","DOIUrl":"https://doi.org/10.48130/frures-0023-0040","url":null,"abstract":"Ethylene plays an important role in regulating the development and ripening of fruits, and 1-aminocyclopropane carboxylic acid synthase is the key rate-limiting enzyme in ethylene synthesis pathway. In this study, eight <italic>PpACS</italic> genes were identified from the peach genome [<italic>Prunus persica</italic> (L.) Batsch], and their phylogeny, gene structures, promoter motifs and expression patterns were analyzed. The <italic>PpACS</italic> genes could be divided into four types, and the genes with similar structures and motif distribution clustered together. Identification of the cis-elements in the promoters revealed that the <italic>PpACS</italic> genes may respond to various hormones. Furthermore, expression analysis showed that five (<italic>PpACS1</italic>, <italic>PpACS5</italic>, <italic>PpACS6</italic>, <italic>PpACS7</italic> and <italic>PpACS8</italic>) of the eight <italic>PpACS</italic> genes were expressed at different stages during peach fruit development. Among them, <italic>PpACS1</italic> was highly expressed at the ripening stage and induced by ethylene. The expression peaks of <italic>PpACS5</italic>, <italic>PpACS6</italic>, <italic>PpACS7</italic> and <italic>PpACS8</italic> during the transition from first exponential growth to pit hardening (S1 to S2) indicated a potential function of ethylene during this important transition. Taken together, these results provide valuable information for future investigation into the functions of the <italic>PpACS</italic> genes during peach fruit development and ripening.","PeriodicalId":37667,"journal":{"name":"Fruit Growing Research","volume":"102 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135505051","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Comprehensive analysis provides insights into Ziyang xiangcheng (&lt;i&gt;Citrus junos&lt;/i&gt; Sieb.) tolerance of alkalinity stress","authors":"Chenyu Xu, Junying Cao, Mei Su, Xianshuo Yan, Hualin Yi, Haijian Yang, Juxun Wu","doi":"10.48130/frures-0023-0037","DOIUrl":"https://doi.org/10.48130/frures-0023-0037","url":null,"abstract":"","PeriodicalId":37667,"journal":{"name":"Fruit Growing Research","volume":"27 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135105914","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}