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The differential effects of integrase strand transfer inhibitors and efavirenz on neuropsychiatric conditions and brain imaging in HIV-positive men who have sex with men 整合酶链转移抑制剂和依非韦伦对艾滋病毒阳性男男性行为者神经精神状况和脑成像的不同影响
IF 3.5
Biosafety and Health Pub Date : 2024-08-01 DOI: 10.1016/j.bsheal.2024.07.001
Yihui He , Yang Zhang , Jiaxin Zhen , Guangqiang Sun , Zhen Li , Bo Yang , Bin Yang , Keyi Chang , Xue Chen , Yulin Zhang , Caiping Guo , Wen Wang , Ping Wu , Tong Zhang , Lei Wang
{"title":"The differential effects of integrase strand transfer inhibitors and efavirenz on neuropsychiatric conditions and brain imaging in HIV-positive men who have sex with men","authors":"Yihui He ,&nbsp;Yang Zhang ,&nbsp;Jiaxin Zhen ,&nbsp;Guangqiang Sun ,&nbsp;Zhen Li ,&nbsp;Bo Yang ,&nbsp;Bin Yang ,&nbsp;Keyi Chang ,&nbsp;Xue Chen ,&nbsp;Yulin Zhang ,&nbsp;Caiping Guo ,&nbsp;Wen Wang ,&nbsp;Ping Wu ,&nbsp;Tong Zhang ,&nbsp;Lei Wang","doi":"10.1016/j.bsheal.2024.07.001","DOIUrl":"10.1016/j.bsheal.2024.07.001","url":null,"abstract":"<div><p>Integrase strand transfer inhibitors (INSTIs) have emerged as the first-line choice for treating human immunodeficiency virus (HIV) infection due to their superior efficacy and safety. However, the impact of INSTIs on the development of neuropsychiatric conditions in people living with HIV (PLWH) is not fully understood due to limited data. In this study, we conducted a cross-sectional examination of PLWH receiving antiretroviral therapy, with a specific focus on HIV-positive men who have sex with men (MSM) on INSTI-based regimens (n = 61) and efavirenz (EFV)-based regimens (n = 28). Participants underwent comprehensive neuropsychiatric evaluations and multimodal magnetic resonance imaging (MRI) scans, including T1-weighted images and resting-state functional MRI. Compared to the EFV group, the INSTI group exhibited primarily reduced gray matter volume (GMV) in the right superior parietal gyrus, higher regional homogeneity (ReHo) in the left postcentral gyrus, lower ReHo in the right orbital part of the inferior frontal gyrus, and increased voxel-wise functional connectivity for the seed region in the left inferior temporal gyrus with clusters in the right cuneus. Furthermore, the analysis revealed a main effect of antiretroviral drugs on GMV changes, but no main effect of neuropsychiatric disorders or their interaction. The repeated analysis of participants who did not switch regimens confirmed the GMV changes in the INSTI group, validating the initial findings. Our study demonstrated gray matter atrophy and functional brain changes in PLWH on INSTI-based regimens compared to those on EFV-based regimens. These neuroimaging results provide valuable insights into the characteristics of brain network modifications in PLWH receiving INSTI-based regimens.</p></div>","PeriodicalId":36178,"journal":{"name":"Biosafety and Health","volume":"6 4","pages":"Pages 216-224"},"PeriodicalIF":3.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590053624000831/pdfft?md5=157ff1fb6d84c6d958ba2fa6b84928e1&pid=1-s2.0-S2590053624000831-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141711380","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A secure visualization platform for pathogenic genome analysis with an accurate reference database 利用精确参考数据库进行病原体基因组分析的安全可视化平台
IF 3.5
Biosafety and Health Pub Date : 2024-08-01 DOI: 10.1016/j.bsheal.2024.07.003
Guomei Fan , Chongye Guo , Qian Zhang , Dongmei Liu , Qinglan Sun , Zhigang Cui , Haijian Zhou , Yuanchun Zhou , Zhibin Guo , Juncai Ma , Linhuan Wu
{"title":"A secure visualization platform for pathogenic genome analysis with an accurate reference database","authors":"Guomei Fan ,&nbsp;Chongye Guo ,&nbsp;Qian Zhang ,&nbsp;Dongmei Liu ,&nbsp;Qinglan Sun ,&nbsp;Zhigang Cui ,&nbsp;Haijian Zhou ,&nbsp;Yuanchun Zhou ,&nbsp;Zhibin Guo ,&nbsp;Juncai Ma ,&nbsp;Linhuan Wu","doi":"10.1016/j.bsheal.2024.07.003","DOIUrl":"10.1016/j.bsheal.2024.07.003","url":null,"abstract":"<div><p>Investigating the genetic and developmental characteristics, infection transmission attributes, and epidemiological trends of pathogens using genomic data represents the foundation for pathogen surveillance and is a crucial prerequisite for guaranteeing global health security. To meet the analytical demands of research relating to pathogen prevention and control, we designed a secure visualization system capable of pathogen genome assembly, annotation, species identification, sequence typing, antibiotic resistance and virulence analysis, genomic mobile element and transferable resistance gene annotation, and phylogenetic tree reconstruction. For highly pathogenic organisms requiring complete data protection, we have developed a secure computing tool that utilizes a trusted execution environment, is combined with blockchain and privacy computing technologies, and is specifically designed for nucleotide<!--> <!-->basic<!--> <!-->local<!--> <!-->alignment<!--> <!-->search<!--> <!-->tool<!--> <!-->(BLASTn) comparison analysis. This technological advancement offers scientific support for in-depth investigations into pathogen transmission and epidemiological mechanisms, environmental adaptability, evolutionary trends, and immune evasion mechanisms, as well as the identification of new or emerging pathogen strains. This, in turn, aids efforts in infectious disease prevention, treatment, and research.</p></div>","PeriodicalId":36178,"journal":{"name":"Biosafety and Health","volume":"6 4","pages":"Pages 235-243"},"PeriodicalIF":3.5,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590053624000843/pdfft?md5=c28924f602680db82ee740d921e239d3&pid=1-s2.0-S2590053624000843-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141713771","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluation of antibody responses in healthy individuals receiving SARS-CoV-2 inactivated vaccines 评估接种 SARS-CoV-2 灭活疫苗的健康人的抗体反应
IF 3.5
Biosafety and Health Pub Date : 2024-06-01 DOI: 10.1016/j.bsheal.2024.04.001
Ziyu Liu , Liyan Cai , Man Xing , Nan Qiao , Jiaojiao Liu , Xuejun Li , Chiyu Zhang , Naijun Tang , Zhelong Xu , Yingying Guo , Renfei Lu , Dongming Zhou
{"title":"Evaluation of antibody responses in healthy individuals receiving SARS-CoV-2 inactivated vaccines","authors":"Ziyu Liu ,&nbsp;Liyan Cai ,&nbsp;Man Xing ,&nbsp;Nan Qiao ,&nbsp;Jiaojiao Liu ,&nbsp;Xuejun Li ,&nbsp;Chiyu Zhang ,&nbsp;Naijun Tang ,&nbsp;Zhelong Xu ,&nbsp;Yingying Guo ,&nbsp;Renfei Lu ,&nbsp;Dongming Zhou","doi":"10.1016/j.bsheal.2024.04.001","DOIUrl":"10.1016/j.bsheal.2024.04.001","url":null,"abstract":"<div><p>Inactivated coronavirus disease 2019 (COVID-19) vaccines such as CoronaVac and BBIBP-CorV have been widely used in China. However, more investigation is still needed to understand antibodies' duration and effectiveness against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants in the real world. In this study, 575 participants who had been vaccinated with two or three doses of the inactivated vaccine were recruited. Serum samples were collected and tested for anti-spike IgG and neutralizing antibodies against SARS-CoV-2 (original strain, Dela, and Omicron). Unsurprisingly, a third dose of the vaccine significantly enhanced antibody responses against SARS-CoV-2 and its variants. However, despite a booster dose, the neutralizing antibody levels against Omicron, particularly the BA.5.2 subvariant, remained low. There was no sex bias, but an age bias was observed. Notably, the predominant IgG subclass antibodies were IgG1 and IgG2, with a much lower level of IgG4. After the booster shot, the ratio of IgG4 to IgG1 significantly increased. The observation of IgG1 to the IgG4 class switch after repeated inactivated vaccinations underscores the importance of continuous monitoring of subclass antibody responses. Further clinical investigations are required to understand the implications of this class switch for optimizing immunization strategies.</p></div>","PeriodicalId":36178,"journal":{"name":"Biosafety and Health","volume":"6 3","pages":"Pages 153-164"},"PeriodicalIF":3.5,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S259005362400051X/pdfft?md5=947b76c1d70ade26d8f1aabc0685b4e7&pid=1-s2.0-S259005362400051X-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140774933","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advances in technology for the laboratory diagnosis of individuals with HIV/AIDS coinfected with Mycobacterium tuberculosis 实验室诊断合并感染结核分枝杆菌的艾滋病毒/艾滋病患者的技术进展
IF 3.5
Biosafety and Health Pub Date : 2024-06-01 DOI: 10.1016/j.bsheal.2024.04.003
Jin Sun , Xiaoxu Han , Hongxia Yan , Xin Zhang , Taiyi Jiang , Tong Zhang , Hao Wu , Grigory Kaminskiy , Yingmin Ma , Eduard Karamov , Bin Su
{"title":"Advances in technology for the laboratory diagnosis of individuals with HIV/AIDS coinfected with Mycobacterium tuberculosis","authors":"Jin Sun ,&nbsp;Xiaoxu Han ,&nbsp;Hongxia Yan ,&nbsp;Xin Zhang ,&nbsp;Taiyi Jiang ,&nbsp;Tong Zhang ,&nbsp;Hao Wu ,&nbsp;Grigory Kaminskiy ,&nbsp;Yingmin Ma ,&nbsp;Eduard Karamov ,&nbsp;Bin Su","doi":"10.1016/j.bsheal.2024.04.003","DOIUrl":"https://doi.org/10.1016/j.bsheal.2024.04.003","url":null,"abstract":"<div><p>The high morbidity and mortality rate of individuals with human immunodeficiency virus (HIV) / acquired immunodeficiency syndrome (AIDS) coinfected with <em>Mycobacterium tuberculosis</em> (MTB) is a tough challenge for current global tuberculosis prevention and control efforts. HIV/MTB coinfection is more complex than a single infection, and the interaction between the two diseases aggravates the deterioration caused by the disease, resulting in increased hospitalizations and deaths. Rapid screening and early diagnosis facilitate the timely initiation of anti-tuberculosis treatment in HIV/MTB coinfected individuals, thereby reducing transmission and the incidence of adverse prognoses. To date, pathogenic detection has remained the gold standard for diagnosing tuberculosis, but its sensitivity and specificity are greatly affected by the body's immune status, which limits its application in the diagnosis of HIV/MTB coinfection. Recently, immunology and molecular detection technology has developed rapidly. New detection technologies, such as interferon-γ release assays, interferon-gamma inducible protein 10, and GeneXpert MTB/RIF assay have overcome the limitations of traditional detection methods, significantly improved the sensitivity and specificity of tuberculosis diagnosis, and brought new hope to the detection of HIV/MTB coinfection. In this article, the principle, scope of application, and latest research progress of relevant detection methods are reviewed to provide a reference for the early diagnosis of HIV/MTB coinfection.</p></div>","PeriodicalId":36178,"journal":{"name":"Biosafety and Health","volume":"6 3","pages":"Pages 133-142"},"PeriodicalIF":3.5,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590053624000533/pdfft?md5=6c0e13fb06e566baef0c07e1307fb3b4&pid=1-s2.0-S2590053624000533-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141444518","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A novel method to assess antibody-dependent cell-mediated cytotoxicity against influenza A virus M2 in immunized murine models 在免疫小鼠模型中评估抗甲型流感病毒 M2 的抗体依赖性细胞介导细胞毒性的新方法
IF 3.5
Biosafety and Health Pub Date : 2024-06-01 DOI: 10.1016/j.bsheal.2024.04.002
Yinjie Liang , Junjia Guo , Zhen Li , Shiyuan Liu , Ting Zhang , Shucai Sun , Funa Lu , Yuqian Zhai , Wenling Wang , Chuanyi Ning , Wenjie Tan
{"title":"A novel method to assess antibody-dependent cell-mediated cytotoxicity against influenza A virus M2 in immunized murine models","authors":"Yinjie Liang ,&nbsp;Junjia Guo ,&nbsp;Zhen Li ,&nbsp;Shiyuan Liu ,&nbsp;Ting Zhang ,&nbsp;Shucai Sun ,&nbsp;Funa Lu ,&nbsp;Yuqian Zhai ,&nbsp;Wenling Wang ,&nbsp;Chuanyi Ning ,&nbsp;Wenjie Tan","doi":"10.1016/j.bsheal.2024.04.002","DOIUrl":"10.1016/j.bsheal.2024.04.002","url":null,"abstract":"<div><p>The matrix protein 2 (M2) is a preferred target for developing a universal vaccine against the influenza A virus (IAV). This study aimed to develop a method for assessing antibody-dependent cell-mediated cytotoxicity (ADCC) associated with M2-based immunization in mice. We first established a stable cell line derived from mouse lymphoma cells (YAC-1) expressing M2 of H3N2. This cell line, designated as YAC-1-M2, was generated using a second-generation lentiviral tricistronic plasmid system to transduce the <em>M2</em> gene into YAC-1 cells. The ADCC effect induced by polyclonal antibodies targeting matrix protein 2 ectodomain (M2e) was demonstrated by YAC-1-M2 cell lysis by natural killer cells (NK) derived from mice, in the presence of anti-M2 antibodies obtained from mice immunized with an mRNA vaccine based on M2e. This ADCC effect was found to be stronger compared to the effect induced by monoclonal antibodies (14C2) against M2. Moreover, the ADCC effect was enhanced as the effector-to-target ratio of NK to YAC-1-M2 cells increased. In conclusion, we established a novel method to detect ADCC of M2 of IAV, which paves the way for the development of an M2-based universal vaccine against IAV and an in-depth analysis of its mechanism of broad-spectrum immune protection in mice.</p></div>","PeriodicalId":36178,"journal":{"name":"Biosafety and Health","volume":"6 3","pages":"Pages 178-185"},"PeriodicalIF":3.5,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590053624000521/pdfft?md5=633e7d024daae893dd871a5c85ddc447&pid=1-s2.0-S2590053624000521-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140796575","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Impact of ursodeoxycholic acid therapy in autoimmune liver disease patients with COVID-19 and its clinical prognosis 熊去氧胆酸治疗对 COVID-19 自身免疫性肝病患者的影响及其临床预后
IF 3.5
Biosafety and Health Pub Date : 2024-06-01 DOI: 10.1016/j.bsheal.2024.04.004
Minghui Li , Weihua Cao , Tingting Jiang , Wen Deng , Shiyu Wang , Shuling Wu , Lu Zhang , Yao Lu , Min Chang , Ruyu Liu , Xiaoyan Ding , Ge Shen , Yuanjiao Gao , Hongxiao Hao , Xiaoxue Chen , Leiping Hu , Mengjiao Xu , Yuyong Jiang , Wei Yi , Yao Xie , Rui Song
{"title":"Impact of ursodeoxycholic acid therapy in autoimmune liver disease patients with COVID-19 and its clinical prognosis","authors":"Minghui Li ,&nbsp;Weihua Cao ,&nbsp;Tingting Jiang ,&nbsp;Wen Deng ,&nbsp;Shiyu Wang ,&nbsp;Shuling Wu ,&nbsp;Lu Zhang ,&nbsp;Yao Lu ,&nbsp;Min Chang ,&nbsp;Ruyu Liu ,&nbsp;Xiaoyan Ding ,&nbsp;Ge Shen ,&nbsp;Yuanjiao Gao ,&nbsp;Hongxiao Hao ,&nbsp;Xiaoxue Chen ,&nbsp;Leiping Hu ,&nbsp;Mengjiao Xu ,&nbsp;Yuyong Jiang ,&nbsp;Wei Yi ,&nbsp;Yao Xie ,&nbsp;Rui Song","doi":"10.1016/j.bsheal.2024.04.004","DOIUrl":"https://doi.org/10.1016/j.bsheal.2024.04.004","url":null,"abstract":"<div><p>To explore the impact of ursodeoxycholic acid (UDCA) on severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection and clinical outcomes in patients with autoimmune liver disease (AILD). Patients diagnosed with AILD were enrolled and divided into a UDCA group and a non-UDCA group based on whether they received UDCA treatment. Relevant data were collected regarding AILD diagnosis, treatment, biochemical indicators, and imaging examination. The incidence of SARS-CoV-2 infection and the prognosis of AILD patients were observed. A total of 1,138 patients completed follow-up. The usage rate of hormone (<em>P</em> = 0.003) and immunosuppressant (<em>P</em> = 0.001) used for treating AILD in the non-UDCA group was markedly lower than in the UDCA group. The UDCA usage rate was markedly lower in SARS-CoV-2 infected patients than in uninfected patients (<em>P</em> = 0.003). The rate of SARS-CoV-2 infection in the non-UDCA group was significantly higher than in the UDCA group (<em>P</em> = 0.018). Logistic regression analysis showed that UDCA use (<em>P</em> = 0.003) was correlated to a lower incidence of SARS-CoV-2, while immunosuppressant use (<em>P</em> = 0.017) increased the incidence. Recovery time from SARS-CoV-2 infection was markedly longer for those receiving UDCA treatment than those in the non-UDCA group (<em>P</em> = 0.018). UDCA is associated with low SARS-CoV-2 incidence in AILD patients, while immunosuppressant increases its incidence instead. Patients receiving UDCA treatment have a longer recovery time after being infected.</p></div>","PeriodicalId":36178,"journal":{"name":"Biosafety and Health","volume":"6 3","pages":"Pages 165-170"},"PeriodicalIF":3.5,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590053624000545/pdfft?md5=bd6ab21d4a00accdd4ec3b047274df81&pid=1-s2.0-S2590053624000545-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141444517","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Caspase-8 activation regulates enterovirus D68 infection-induced inflammatory response and cell death Caspase-8 激活调控肠道病毒 D68 感染诱发的炎症反应和细胞死亡
IF 3.5
Biosafety and Health Pub Date : 2024-06-01 DOI: 10.1016/j.bsheal.2024.03.003
Yuanyuan Zhou , Chongtao Zhang , Yuhan Zhang , Fei Li , Jun Shen
{"title":"Caspase-8 activation regulates enterovirus D68 infection-induced inflammatory response and cell death","authors":"Yuanyuan Zhou ,&nbsp;Chongtao Zhang ,&nbsp;Yuhan Zhang ,&nbsp;Fei Li ,&nbsp;Jun Shen","doi":"10.1016/j.bsheal.2024.03.003","DOIUrl":"10.1016/j.bsheal.2024.03.003","url":null,"abstract":"<div><p>Enterovirus D68 (EV-D68) infection causes severe acute respiratory infection and severe neurological complications, such as acute flaccid myelitis (AFM), in children. However, although EV-D68 has pandemic potential, no effective drugs or vaccines are currently clinically available. Furthermore, EV-D68 infection-induced inflammatory response and cell death are not fully understood. In this study, we demonstrated that several inflammatory cytokines were upregulated in a multiplicity of infection (MOI) dependent manner in EV-D68-infected human rhabdomyosarcoma (RD) cells. Quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) confirmed that tumor necrosis factor-α (TNF-α), interleukin 6 (IL-6), C-C motif chemokine ligand-5 (CCL-5), and CXC motif chemokine ligand-5 (CXCL-5) mRNA levels were highly upregulated after EV-D68 infection. IL-1β processing and maturation mediated by caspase-8 was inhibited by the caspase-8 inhibitor Z-IETD-FMK. EV-D68 infection activates caspase-8 to mediate IL-1β maturation and secretion. Additionally, EV-D68 activated cell death-related proteins such as caspase-3, poly (ADP-ribose) polymerase 1 (PARP-1), phosphorylation of Mixed Lineage Kinase domain-like protein (pMLKL), and gasdermin E (GSDME). Thus, EV-D68 infection activates caspase-8, which triggers the necroptosis and apoptosis pathways. Overall, our data suggest that caspase-8 activation is associated with the inflammatory response and cell death in EV-D68-infected RD cells. This mechanism represents a novel target for the treatment of EV-D68 infection by inhibiting caspase-8 activation.</p></div>","PeriodicalId":36178,"journal":{"name":"Biosafety and Health","volume":"6 3","pages":"Pages 171-177"},"PeriodicalIF":3.5,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590053624000302/pdfft?md5=7a67ed2179da31c35d235619dd45c913&pid=1-s2.0-S2590053624000302-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140085746","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A novel method for identifying SARS-CoV-2 infection mutants via an epitope-specific CD8+ T cell test 通过表位特异性 CD8+ T 细胞检测鉴定 SARS-CoV-2 感染突变体的新方法
IF 3.5
Biosafety and Health Pub Date : 2024-06-01 DOI: 10.1016/j.bsheal.2024.03.005
Congling Qiu , Bo Peng , Chanchan Xiao , Pengfei Chen , Lipeng Mao , Xiaolu Shi , Zhen Zhang , Ziquan Lv , Qiuying Lv , Xiaomin Zhang , Jiaxin Li , Yanhao Huang , Qinghua Hu , Guobing Chen , Xuan Zou , Xiaofeng Liang
{"title":"A novel method for identifying SARS-CoV-2 infection mutants via an epitope-specific CD8+ T cell test","authors":"Congling Qiu ,&nbsp;Bo Peng ,&nbsp;Chanchan Xiao ,&nbsp;Pengfei Chen ,&nbsp;Lipeng Mao ,&nbsp;Xiaolu Shi ,&nbsp;Zhen Zhang ,&nbsp;Ziquan Lv ,&nbsp;Qiuying Lv ,&nbsp;Xiaomin Zhang ,&nbsp;Jiaxin Li ,&nbsp;Yanhao Huang ,&nbsp;Qinghua Hu ,&nbsp;Guobing Chen ,&nbsp;Xuan Zou ,&nbsp;Xiaofeng Liang","doi":"10.1016/j.bsheal.2024.03.005","DOIUrl":"10.1016/j.bsheal.2024.03.005","url":null,"abstract":"<div><p>Since the outbreak of the coronavirus disease 2019 (COVID-19) epidemic in 2019, the public health system has faced enormous challenges. Tracking the individuals who test positive for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a key step for interrupting chains of transmission of SARS-CoV-2 and reducing COVID-19-associated mortality. With the increasing of asymptomatic infections, it is difficult to track asymptomatic infections through epidemiological surveys and virus whole-genome sequencing. However, due to the cross-reactivity of neutralizing antibodies produced by multiple virus subtypes, neutralizing antibody detection cannot be used to determine whether an individual has a history of infection with a specific subtype of SARS-CoV-2. We recruited 4 human leukocyte antigen A2 (HLA-A2) infections, 15 individuals who received three doses of inactivated vaccines, and 30 breakthrough infections after vaccination and discussed a case-tracking approach to detect epitope-specific CD8<sup>+</sup> T cells in the peripheral blood of close contacts, including accurate HLA typing based on ribonucleic acid (RNA)-sequencing and flow cytometry data and the comparison and characterization of SARS-CoV-2 HLA-A2 and HLA-A24 epitope-specific CD8<sup>+</sup> T cells. From individuals who received three doses of inactivated vaccine, we observed that the CD8<sup>+</sup> T cell specificity for ancestral epitopes was significantly higher than for mutated epitopes, and the fold change of CD8<sup>+</sup> T cells corresponding to mutated epitopes relative to ancestral epitopes was less than 1. The enzyme-linked immunospot (ELISpot) results further validate this result. This study forms a “method for understanding the infection history of SARS-CoV-2 subtypes based on the proportion of epitope-specific CD8<sup>+</sup> T cells in the peripheral blood of subjects”, covering up to 46 % of the population, including HLA-A2<sup>+</sup> and HLA-A24<sup>+</sup> donors, providing a novel method for SARS-CoV-2 infected case tracing.</p></div>","PeriodicalId":36178,"journal":{"name":"Biosafety and Health","volume":"6 3","pages":"Pages 143-152"},"PeriodicalIF":3.5,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590053624000326/pdfft?md5=f1efcb418ab5e241a7316a79df11a3a4&pid=1-s2.0-S2590053624000326-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140399126","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Transmission of ceftazidime-avibactam-resistant Escherichia coli among pets, veterinarians and animal hospital environment 耐头孢他啶-阿维菌素大肠杆菌在宠物、兽医和动物医院环境中的传播
IF 3.5
Biosafety and Health Pub Date : 2024-06-01 DOI: 10.1016/j.bsheal.2024.03.004
Hegen Dai , Dongyan Shao , Yu Song , Qi An , Zhenbiao Zhang , Haixia Zhang , Siyu Chen , Congming Wu , Jianzhong Shen , Yanli Lyu , Yang Wang , Shizhen Ma , Zhaofei Xia
{"title":"Transmission of ceftazidime-avibactam-resistant Escherichia coli among pets, veterinarians and animal hospital environment","authors":"Hegen Dai ,&nbsp;Dongyan Shao ,&nbsp;Yu Song ,&nbsp;Qi An ,&nbsp;Zhenbiao Zhang ,&nbsp;Haixia Zhang ,&nbsp;Siyu Chen ,&nbsp;Congming Wu ,&nbsp;Jianzhong Shen ,&nbsp;Yanli Lyu ,&nbsp;Yang Wang ,&nbsp;Shizhen Ma ,&nbsp;Zhaofei Xia","doi":"10.1016/j.bsheal.2024.03.004","DOIUrl":"10.1016/j.bsheal.2024.03.004","url":null,"abstract":"<div><p>Ceftazidime-avibactam (CZA) is a recently approved combination synthetic β-lactamase inhibitor used in human clinical medicine. Cases of CZA resistance in humans have already been reported, but limited research has investigated CZA resistance in pets. This study explored the prevalence and transmission of CZA-resistant <em>Escherichia coli</em> (CZAREC) among pets, their owners, veterinarians, and the environment in animal hospitals. A total of 5,419 clinical samples were collected from dogs and cats, along with samples from the environment (n = 5,843), veterinarians (n = 557), and pet owners (n = 368) in animal hospitals. From these samples, 760 <em>Escherichia coli</em> (<em>E. coli</em>) isolates were obtained, out of which 60 were identified as CZAREC. These included 34 isolates from the environment (9.14 %, n = 372), three from veterinarians (8.11 %, n = 37), and 23 from animals (6.82 %, n = 337). No CZAREC isolates were found in pet owners. The predominant sequence types of CZARECs were ST156 (n = 20), ST410 (n = 19) and ST101 (n = 7). Bayesian analysis revealed six clusters comprising 47 isolates from the hospital environment, pets, and veterinaries, displaying genetic relatedness of less than 100 core genome single nucleotide polymorphisms (cgSNPs) between any two isolates in each cluster. Some CZAREC isolates with high genetic similarity persisted in the same animal hospital for four to six months. Moreover, discriminant analysis of principal components indicated that most isolates from different hosts shared a genetic source in the human/dog/cat merged cluster. Overall, evidence of CZARECs transmission was found among pets, the environment, and veterinarians in animal hospitals. The findings emphasize the importance of monitoring CZARECs in the veterinary clinical setting to ensure the health of both pets and humans.</p></div>","PeriodicalId":36178,"journal":{"name":"Biosafety and Health","volume":"6 3","pages":"Pages 191-198"},"PeriodicalIF":3.5,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590053624000314/pdfft?md5=0f67f4c914a912630bf07e2521592641&pid=1-s2.0-S2590053624000314-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140277099","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Human mpox co-infection with advanced HIV-1 and XDR-TB in a MSM patient previously vaccinated against smallpox: A case report 一名曾接种过天花疫苗的 MSM 患者合并感染人类 mpox 与晚期 HIV-1 和 XDR-TB:病例报告
IF 3.5
Biosafety and Health Pub Date : 2024-06-01 DOI: 10.1016/j.bsheal.2024.04.005
Yuan Fang , Fuchun Wang , Taiyi Jiang, Junyi Duan, Tao Huang, Hao Liu, Lin Jia, Han Jia, Benyong Yan, Mei Zhang, Wen Wang, Caiping Guo, Lifeng Liu, Yuening Zhang, Tong Zhang
{"title":"Human mpox co-infection with advanced HIV-1 and XDR-TB in a MSM patient previously vaccinated against smallpox: A case report","authors":"Yuan Fang ,&nbsp;Fuchun Wang ,&nbsp;Taiyi Jiang,&nbsp;Junyi Duan,&nbsp;Tao Huang,&nbsp;Hao Liu,&nbsp;Lin Jia,&nbsp;Han Jia,&nbsp;Benyong Yan,&nbsp;Mei Zhang,&nbsp;Wen Wang,&nbsp;Caiping Guo,&nbsp;Lifeng Liu,&nbsp;Yuening Zhang,&nbsp;Tong Zhang","doi":"10.1016/j.bsheal.2024.04.005","DOIUrl":"10.1016/j.bsheal.2024.04.005","url":null,"abstract":"<div><p>Mpox is a zoonotic infectious disease caused by the mpox virus (MPXV). Historically, the majority of mpox cases have been documented in Central Africa. However, since May 2022, there has been a notable rise in reported cases from regions beyond Africa. Currently, over 110 countries spanning Europe, North America, South America, Asia, and other territories have reported mpox infections. This report details a case involving a patient who identifies as a man who has sex with men (MSM) and is concurrently infected with MPXV, human immunodeficiency virus type 1 (HIV-1), <em>Pneumocystis jiroveci</em>, as well as extensively drug-resistant tuberculosis (XDR-TB). This patient had also received a vaccination for smallpox in the past. Additionally, we provide photographic documentation charting the progression of dermatological manifestations associated with mpox. This case highlights the significance of sexual intercourse as a crucial mode of transmission for mpox. The rapid and widespread dissemination of the MPXV across various regions, especially among MSM communities, underscores the importance of enhancing preventive education efforts targeted at high-risk populations.</p></div>","PeriodicalId":36178,"journal":{"name":"Biosafety and Health","volume":"6 3","pages":"Pages 186-190"},"PeriodicalIF":3.5,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590053624000557/pdfft?md5=5eae38213102665147a6a1c9a715d203&pid=1-s2.0-S2590053624000557-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141023703","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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