{"title":"Evaluation and Optimization of a Loop-Mediated Isothermal Amplification (LAMP) Assay for the Detection of Salmonella enterica serovar Typhi Isolated from Food Samples","authors":"F. Foroohi, H. Zamani, Sajjad Yazdan setad","doi":"10.29252/IEM.6.4.259","DOIUrl":"https://doi.org/10.29252/IEM.6.4.259","url":null,"abstract":"CITATION LINKS A R T I C L E I N F O Article Type Original Research Authors Fatemeh Forohi, PhD1* Hadi Zamani, PhD1 Sajjad Yazdansetad, PhD2 How to cite this article Forohi F., Zamani H., Yazdansetad S. Evaluation and Optimization of a Loop-Mediated Isothermal Amplification (LAMP) Assay for the Detection of Salmonella enterica serovar Typhi Isolated from Food Samples. Infection Epidemiology and Microbiology. 2020;6(4): 259-267 1Department of Microbiology, Shahr-e-Qods Branch, Islamic Azad University, Tehran, Iran 2Laboratory Sciences Research Center, Golestan University of Medical Sciences, Gorgan, Iran * Correspondence Address: Department of Microbiology, Faculty of Basic Sciences, Shahre-Qods-Branch, Islamic Azad University, Tehran, Iran. f_foroohi@ymail.com Article History Received: July 21 ,2020 Accepted: October 15 ,2020 Published: November 19 ,2020 [1] Bhandari DP. Characterization of flagellin antigen using a panel of ...[2] Babar A, Butt SJ, Ullah S. A review of prognostic models on diagnosis and ... [3] Olobatoke R. Public health burden of non-typhoidal Salmonella strains in sub-Saharan ... [4] Yang Q, Domesle KJ, Wang F, Ge B. Rapid detection of Salmonella in food and feed ... [5] Foddai AC, Grant IR. Methods for detection of viable foodborne pathogens: Current state-of-art ... [6] Zhai L, Liu H, Chen Q, Lu Z, Zhang C, Lv F, et al. Development of a real-time nucleic acid ... [7] Linh Quyen T, Nordentoft S, Chidambara Vinayaka A, Ngo TA, Engelsmenn P, Sun Y, et al. A sensitive, specific, and ... [8] Notomi T, Okayama H, Masubuchi H, Yonekawa T, Watanabe K, Amino N, et al. Loop-mediated ... [9] HaraKudo Y, Yoshino M, Kojima T, Ikedo M. Loop-mediated isothermal amplification for ... [10] Havelaar A, Grace D, Wu F. Foodborne diseases from dairy products in developing ...[11] Shahbazi S, Karam MRA, Habibi M, Talebi A, Bouzari S. Distribution of ... [12] Nair A, Balasaravanan T, Malik SS, Mohan V, Kumar M, Vergis J, et al. Isolation and ... [13] Köchl S, Niederstätter H, Parson W. DNA extraction and quantitation of forensic ... [14] Vickers NJ. Animal communication: When I’m calling you, will you answer ... [15] Zhang G, Brown EW, González-Escalona N. Comparison of real-time PCR, reverse transcriptase real-time PCR, loop-mediated isothermal amplification, and the FDA conventional microbiological method for ...[16] Srisawat M, Panbangred W. Efficient and specific detection of Salmonella in food ... [17] Yang Q, Domesle KJ, Ge B. Loop-mediated isothermal amplification for Salmonella detection ... [18] Ravan H, Amandadi M. A rapid and specific detection of pathogenic serovar Salmonella ... [19] Moganedi K, Goyvaerts E, Venter SN, Sibara M. Optimisation of the PCR-invA primers for ... [20] Techathuvanan C, Draughon FA, D’Souza DH. Loop-mediated isothermal amplification (LAMP) for ... [21] Zhao X, Wang L, Chu J, Li Y, Li Y, Xu Z, et al. Development and application of a rapid and simple ... [22] Zhang Y, Shan X, Shi L, Lu X, Tang S, Wang Y, et al. ","PeriodicalId":34545,"journal":{"name":"Infection Epidemiology and Microbiology","volume":"98 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81029996","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
F. Keramat, Sima Sadat Ahmadinejad, Z. Sanaei, A. Saadatmand
{"title":"The Main Causes of Mortality in the Respiratory ICU and Infectious diseases Ward of Sina Hospital in Hamadan","authors":"F. Keramat, Sima Sadat Ahmadinejad, Z. Sanaei, A. Saadatmand","doi":"10.29252/iem.6.2.135","DOIUrl":"https://doi.org/10.29252/iem.6.2.135","url":null,"abstract":"Article Type Original Research Authors Fariba keramat, MD1, 2 Sima Sadat Ahmadinejad, MD3* Zahra Sanaei, PhD4 Ali Saadatmand, MSc1 How to cite this article keramat F., Ahmadinejad S.S., Sanaei Z., Saadatmand A., The Main Causes of Mortality in the Respiratory ICU and Infectious diseases Ward of Sina Hospital in Hamadan. Infection Epidemiology and Microbiology. 2020;6(2): 135-141 1 Brucellosis Research Center, Hamadan University of Medical Sciences, Hamadan, Iran. 2 Department of Infectious Diseases, Sina Hospital, Hamadan University of Medical Sciences, Hamadan, Iran. 3 General Practitioner, School of Medicine, Hamadan University of Medical Sciences, Hamadan, Iran. 4 Department of Community Medicine, School of Medicine, Hamadan University of Medical Sciences, Hamadan, Iran. * Correspondence Address: Department of Infectious Diseases, Sina Hospital, Hamadan University of Medical Sciences, Hamadan, Iran. simasadatahmadinejad@gmail.com Article History Received: March 15 ,2020 Accepted: May 15 ,2020 Published: June 10 ,2020 [1] Kasper DL, Madoff LC. Introduction to infectious ... [2] Gupta I, Guin P. Communicable diseases in the South-East... [3] Boutayeb A, Boutayeb S. The burden of non communicable diseases in ... [4] Lankarani KB, Alavian SM, Peymani P. Health in the Islamic... [5] Wester AL, Dunlop O, Melby KK, Dahle UR, Wyller TB. Age-related... [6] Fernández de la Hoz K, de Mateo S, Regidor E. Trends in infectious... [7] Dore GJ, Li Y, Plant AJ, Kaldor JM. Trends in infectious disease... [8] TavanaeeSani A, Mirkarimi H. Evaluation of etiology of infectious ... [9] Mouton CP, Bazaldua OV, Pierce B, Espino DV. Common infections in older... [10] Armstrong GL, Conn LA, Pinner RW. Trends in infectious disease mortality in the United... [11] Golsha R, Golshah E, Jalali Z, Rajabli N, Roshandel G. Final diagnosis and outcomes in old patients admitted to the infectious diseases ward. Med J Mashhad Univ... [12] Hasibi M, Soudbakhsh A, Abadi Z, Mehdipoor P. Mortality rate of infectious disease in relation to holidays: Three year study in Imam Khomeini... [13] Mahmoudi GA, Astaraki P, Anbari K, Khayatpisheh S. Epidemiolgical survey of mortality rate in patients admitted to Shohada hospital of Khorramabad in... [14] Noorizad S, Tabesh H, Mahdian M, Akbari H, Taghadosi M. Causes of mortality and morbidity in a neurosurgery ICU in... [15] Norman DC, Grahn D, Yoshikawa TT. Fever and aging. J Am Geriatr... [16] Norman DC, Yoshikawa TT. Fever in the elderly. Infect Dis Clin... [17] Almario CV, Metz DC, Haynes K, Yang YX. Risk of community-acquired pneumonia in patients with a diagnosis of pernicious anemia: A population-based retrospective cohort study. Eur J Gastroenterol ... [18] Serraino D, Bidoli E, Piselli P, Angeletti C, Bruzzone S, Pappagallo M, et al. Time trends in infectious disease mortality in Italy: 1999-1969. Epidemiol... [19] Tellioğlu E, Balcı G, Mertoğlu A. Duration of stay of patients with community-acquired pneumonia in influenza season. Turk ","PeriodicalId":34545,"journal":{"name":"Infection Epidemiology and Microbiology","volume":"44 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74205046","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Prevalence of blaTEM and blaVEB Genes in Multidrug-Resistant Acinetobacter baumannii Strains Isolated from Burn Wound Infection in Isfahan, Iran","authors":"Elham Haghighifar, R. Dolatabadi, A. Rezaei","doi":"10.29252/iem.6.2.109","DOIUrl":"https://doi.org/10.29252/iem.6.2.109","url":null,"abstract":"Article History Received: March 15 ,2020 Accepted: May 15 ,2020 Published: June 10 ,2020 [1] Hashim IA, Wdaah QH, Atya AA. Potential effect of ... [2] Peck MD. Epidemiology of burns throughout the world. Part I: Distribution and ... [3] Capoor MR., Sarabahi S, Tiwari VK, Narayanan RP. Fungal ... [4] Zubair M, Malik A, Ahmad J, Rizvi M, Farooqui KJ, Rizvi MW. A study of ... [5] Asadollahi P, Akbari M, Soroush S, Taherikalani M, Asadollahi K, Sayehmiri K, et al. Antimicrobial resistance patterns and their encoding genes ... [6] Rezaei A, Fazeli H, Moghadampour M, Halaji M, Faghri J. Determination of antibiotic resistance pattern and prevalence of OXA-type carbapenemases among Acinetobacter baumannii clinical isolates from inpatients in Isfahan, central ... [7] Rezaei A, Fazeli H, Halaji M, Moghadampour M, Faghri J. Prevalence of ... [8] Heidari H, Halaji M, Taji A, Kazemian H, Abadi MSS, Sisakht MT, et al. Molecular analysis of drug-resistant ... [9] García-Patiño MG, García-Contreras R, Licona-Limón P. The immune response against Acinetobacter baumannii, an ... [10] Kittinger C, Kirschner A, Lipp M, Baumert R, Mascher F, Farnleitner AH, et al. Antibiotic resistance of Acinetobacter spp. isolates from the river ... [11] JafariSales A, Bagherizadeh Y, Khalifehpour M, Abdoli-senejan M, Helali-Pargali R. Antibiotic resistance pattern and blaTEM gene expression in Acinetobacter baumannii isolated from clinical specimens ... [12] Ghaima KK, Abdulhassan AA, Mahdi ZH. Molecular study of ... [13] Torkar KG, Bedenić B. Antimicrobial susceptibility and characterization of metalloβ-lactamases, extended ... [14] Fazeli H, Taraghian A, Poursina F, Kamali R. Molecular ... [15] Sohail M, Rashid A, Aslam B, Waseem M, Shahid M, Akram M, et al. Antimicrobial ... [16] Rezai MS, Rafiei A, Ahangarkani F, Bagheri-Nesami M, Nikkhah A, Shafahi K, et al. Emergence ... [17] Burcu B, Acik L, Sultan L. Phenotypic and molecular ... [18] Vahidi Emami H, Khalilian M, Yadollahi Movahhed N. Antibiotic ... [19] Moosavian M, Sirous M, Shams N. Phenotypic and ... [20] Bali EB, Accedil L, Sultan N. Phenotypic ... [21] Salih TS, Shafeek RR. In silico detection ... [22] Abdar MH, Taheri-Kalani M, Taheri K, Emadi B, Hasanzadeh A, Sedighi A, et al. Prevalence of ... [23] Ahmadikiya F, Mosadegh A, Moradi M, Hossieni-Nave H. Antimicrobial ... [24] Azizi O, Shahcheraghi F. The frequency of blaPER, blaVEB, blaCTX-M, tetA and tetB genes among ... [25] Shahcheraghi F, Akbari Shahmirzadi N, Abbasalipour Bashash M, Jabbar H, Amirmozafari N. Detection ... [26] Safari M, Nejad ASM, Bahador A, Jafari R, Alikhani MY. Prevalence of ... Aims: Acinetobacter baumannii is an opportunistic pathogen that is resistant to many antibiotics including beta-lactams. Production of β-lactamases is the main mechanism of β-lactam resistance in A. baumannii strains. The aim of this study was to determine the frequency of blaTEM and blaVEB genes in clinical isolates of A. baumannii and the relationship between the anti","PeriodicalId":34545,"journal":{"name":"Infection Epidemiology and Microbiology","volume":"58 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81558775","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ghasem Heidari, S. J. H. Hazaveh, M. Bayat, B. Daraei
{"title":"Measuring the Level of Main Mycotoxins in Wheat Samples Collected from Flour Factories Silos in Alborz and Tehran Provinces Using LC-MS/MS","authors":"Ghasem Heidari, S. J. H. Hazaveh, M. Bayat, B. Daraei","doi":"10.29252/iem.6.2.95","DOIUrl":"https://doi.org/10.29252/iem.6.2.95","url":null,"abstract":"Article Type Original Research Authors Ghasem Heidari, PhD Seyed Jamal Hashemi Hazaveh, PhD1 Mansour Bayat, PhD1, Bahram Daraei, PhD3* How to cite this article Heidari GH., Hashemi Hazaveh S. J., Bayat M., Daraei B. Measuring the Level of Main Mycotoxins in Wheat Samples Collected from Flour Factories Silos in Alborz and Tehran Provinces Using LC-MS/ MS. Infection Epidemiology and Microbiology. 2020;6(2): 95-107 1 Department of pathobiology, Science and Research Branch, Islamic Azad University,Tehran,Iran 2 Department of Medical Parasitology and Mycology, School of Public Health, Food Microbiology Research Center, Tehran University of Medical Sciences,Tehran,Iran 3 Departement of Toxicology and Pharmacology, School of pharmacy, Shahid Beheshti University of Medical Sciences,Tehran,Iran * Correspondence Address: Departement of Toxicology and Pharmacology, School of pharmacy, Shahid Beheshti University of Medical Sciences,Tehran,Iran. bdaraei@sbmu.ac.ir Article History Received: April 05 ,2020 Accepted: March 30 ,2020 Published: June 10 ,2020 [1] Bhat R, Rai RV, Karim AA. Mycotoxins ... [2] Cheng CT, Perak M. Mass poisoning tale of ... [3] Bryden WL. Mycotoxin contamination of the feed supply chain: Implications for animal productivity and ... [4] Marquardt RR. Effects of molds and their toxins on livestock performance: A western Canadian perspective. Anim Feed ... [5] Richard JL. Some major mycotoxins and their mycotoxicosesAn overview. Int J Food ... [6] Kim DH, Hong SY, Kang JW, Cho SM, Lee KR, An TK, et al. Simultaneous determination of ... [7] Vaclavikova M, MacMahon S, Zhang K, Begley TH. Application of single immunoaffinity clean-up for ... [8] Park J, Kim DH, Moon JY, An JA, Kim YW, Chung SH, et al. Distribution analysis of ... [9] Sarrafian MR. Country report: Iran. Thailand, Chiang Rai: Fourth session of the technical ... [10] Reddy CS. Mycotoxin ... [11] Zamani-Zadeh HR, Khoursandi H. Occurrence of ... [12] Sulyok M, Berthiller F, Krska R, Schuhmacher R. Development and... [13] Rasmussen RR, Storm IMLD, Rasmussen PH, Smedsgaard J, Nielsen K F. Multi-mycotoxin analysis of ... [14] Sorensen LK, Elbaek TH. Determination... [15] Frenich AG, Vidal JLM, Romero-Gonzalez R, Aguilera-Luiz MM. Simple and ... [16] Razzazi-Fazeli E. A review of recent trends in applications of liquid chromatography-mass spectrometry for determination of mycotoxins. J Liq Chromatogr ... [17] Di Mavungu JD, Monbaliu S, Scippo ML, Maghuin Rogister G, Schneider YJ, Larondelle Y, et al. LC-MS/MS multi-analyte method for ... [18] Monbaliu S, Van Poucke C, van Peteghem C, Van Poucke K, Heungens K, de Saeger S. Development of ... [19] Boyd RK, Basic C, Bethem RA. Trace ... [20] Ediage EN, Di Mavungu JD, Monbaliu S, Van Peteghem C, De Saeger S. A validated multianalyte LC–MS/MS method for quantification of 25 mycotoxins in cassava flour, peanut cake and ... [21] Ediage EN, Van Poucke C, De Saeger S. A multi-analyte... [22] Commission Regulation ... [23] Soleimany F, Jinap S,","PeriodicalId":34545,"journal":{"name":"Infection Epidemiology and Microbiology","volume":"1 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"88920263","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}