Warood Kream Alaarage , Kasim Kadhim Alasedi , Abbas H. Abo Nasria , Tamadhur Alaa Hussein , Rajaa R. Abbas , Hayder H. Hussain
{"title":"A DFT investigation of monolayer InP: Effective toxic gas sensor with adsorption and optical response","authors":"Warood Kream Alaarage , Kasim Kadhim Alasedi , Abbas H. Abo Nasria , Tamadhur Alaa Hussein , Rajaa R. Abbas , Hayder H. Hussain","doi":"10.1016/j.comptc.2024.114897","DOIUrl":"10.1016/j.comptc.2024.114897","url":null,"abstract":"<div><div>An examination was conducted on the electronic and optical characteristics of gas (H<sub>2</sub>S, CO<sub>2</sub>, CO, SO<sub>2</sub>, and SO) adsorption on a monolayer of InP using first-principles calculations based on DFT. To identify the optimal and most sensitive adsorption site for the adsorbed gases, four initial adsorption sites were selected. Various aspects such as adsorption distance, charge densities, and adsorption energy were analyzed across different types of adsorption to determine the most favorable adsorption configurations. Our research indicates that InP monolayers can chemically adsorb CO<sub>2</sub>, CO, SO<sub>2</sub>, and SO, forming new bonds with these gas molecules. Furthermore, H<sub>2</sub>S can be physically absorbed onto InP with a high level of adsorption energy. The optical findings reveal that the presence of gas molecules alters the conductivity and optical properties of the InP monolayer, especially noticeable in the UV range. InP emerges as a suitable material for detecting CO<sub>2</sub>, CO, SO<sub>2</sub>, and SO due to its distinct characteristics.</div></div>","PeriodicalId":284,"journal":{"name":"Computational and Theoretical Chemistry","volume":"1241 ","pages":"Article 114897"},"PeriodicalIF":3.0,"publicationDate":"2024-09-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142422929","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Rahma El Mouhi , Ahmed Slimi , Souad El Khattabi , Adil Touimi Benjelloun , Asmae Fitri , Mohammed Benzakour , Mohammed Mcharfi , Mustafa Kurban
{"title":"Computational study of new small molecules D-A based on triphenylamines for bulk heterojunction solar cells (BHJ)","authors":"Rahma El Mouhi , Ahmed Slimi , Souad El Khattabi , Adil Touimi Benjelloun , Asmae Fitri , Mohammed Benzakour , Mohammed Mcharfi , Mustafa Kurban","doi":"10.1016/j.comptc.2024.114899","DOIUrl":"10.1016/j.comptc.2024.114899","url":null,"abstract":"<div><div>In this computational study, four donor–acceptor (D–A) small molecules were constructed using indacenodithiophene triphenylamine (IDTTPA) as the donor, with modifications made to the acceptor units intended for use in organic bulk heterojunction (BHJ) solar cells. Their electrical and optical properties were determined through density functional theory (DFT) and time-dependent DFT (TD-DFT) techniques. To ascertain the impact of acceptor group modifications on intramolecular electron delocalization and light absorption capabilities, several key variables were examined. Based on the results, it was determined that molecule SM4 demonstrated the best performance among the designed compounds. It exhibited a maximum wavelength of 594 nm, a narrow energy gap of 1.91 eV, a low-lying HOMO energy level of −4.512 eV in its absorption spectra, and a theoretical power conversion efficiency (PCE) of 8 %. This research provides valuable insights for the development of efficient D-A compounds for use in organic solar cells.</div></div>","PeriodicalId":284,"journal":{"name":"Computational and Theoretical Chemistry","volume":"1241 ","pages":"Article 114899"},"PeriodicalIF":3.0,"publicationDate":"2024-09-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142422841","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Zhi Zheng , Jun Shen , Zhenqing Han , Yu Chen , Yifan Bai
{"title":"Unveiling the role of oxygen in ammonia coal combustion: A DFT study on NOx emission mechanism","authors":"Zhi Zheng , Jun Shen , Zhenqing Han , Yu Chen , Yifan Bai","doi":"10.1016/j.comptc.2024.114893","DOIUrl":"10.1016/j.comptc.2024.114893","url":null,"abstract":"<div><div>Ammonia-coal combustion mitigates CO<sub>2</sub> emissions, yet nitrogen oxide emissions and char nitrogen oxidation mechanisms require further study. Our research employs density functional theory to explore coal char interactions with NO, NH<sub>3</sub>, and the impact of hydroxyls (–OH) and oxygen on reduction–oxidation processes. Findings indicate oxygen aids in forming hydroxyls on coal char, facilitating NO to NO<sub>2</sub> conversion, lowering the activation energy for ammonia-coal oxidation to NO<sub>2</sub>. Oxygen also promotes char nitrogen oxidation to NO, reducing its activation energy. In NH<sub>3</sub>/coal/O<sub>2</sub> systems, NH<sub>3</sub> oxidation initiates NO formation. With the increase of the temperature, the reduction rate of NO by ammonia is always higher than the production rate of NO.</div></div>","PeriodicalId":284,"journal":{"name":"Computational and Theoretical Chemistry","volume":"1241 ","pages":"Article 114893"},"PeriodicalIF":3.0,"publicationDate":"2024-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142359586","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tianyan Jiang , Feifan Wu , Hao Wu , Haonan Xie , Biao Deng , Maoqiang Bi
{"title":"Adsorption and gas sensing properties of CH4, C2H2, and C2H4 dissolved gases in transformer oil on Pdn(n = 1–4)-doped WTe2 monolayers: A DFT study","authors":"Tianyan Jiang , Feifan Wu , Hao Wu , Haonan Xie , Biao Deng , Maoqiang Bi","doi":"10.1016/j.comptc.2024.114895","DOIUrl":"10.1016/j.comptc.2024.114895","url":null,"abstract":"<div><div>This paper investigates the potential of palladium (Pd) and its clusters-doped tungsten ditelluride (WTe<sub>2</sub>) monolayer materials for the detection of dissolved gases (such as CH<sub>4</sub>, C<sub>2</sub>H<sub>2</sub>, and C<sub>2</sub>H<sub>4</sub>) in transformer oil. Density functional theory (DFT) was used to study the effect of Pd<sub>n</sub> (n = 1–4) doping on the gas sensing and adsorption properties of WTe<sub>2</sub> monolayer materials. The results show that Pd<sub>n</sub> doping can significantly improve the adsorption capacity and gas sensing performance of WTe<sub>2</sub> to these gas molecules, especially showing excellent performance in detecting acetylene and ethylene. Studies have shown that Pd<sub>n</sub> doping improves the electrical conductivity of WTe<sub>2</sub>, making it more suitable for the development of gas sensors. Through the calculation of state density, molecular orbital and charge density difference, the adsorption mechanism of Pd<sub>n</sub>-doped WTe<sub>2</sub> monolayer to different gas molecules was revealed. This study provides a theoretical basis and guidance for the development of efficient sensor materials for fault gas detection in transformer oil. In conclusion, the proposed Pd-doped WTe<sub>2</sub> monolayer demonstrates promising potential for detecting dissolved gases in transformer oil. Future work will focus on experimental validation and further optimization of the material’s sensitivity and selectivity towards other gas species.</div></div>","PeriodicalId":284,"journal":{"name":"Computational and Theoretical Chemistry","volume":"1241 ","pages":"Article 114895"},"PeriodicalIF":3.0,"publicationDate":"2024-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142442407","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A comprehensive numerical investigation on structural stability, mechanical, and optoelectronic properties of HfxSi1‑xO2 tetragonal compounds from the hafnon Family","authors":"Amira Nour Asfora , Slimane Haid , Mawloud Ould Moussa","doi":"10.1016/j.comptc.2024.114894","DOIUrl":"10.1016/j.comptc.2024.114894","url":null,"abstract":"<div><div>This numerical research explores the structural stability, phonons, electronic, and optical properties of tetragonal Hf<sub>x</sub>Si<sub>1-x</sub>O<sub>2</sub> solid solutions for the rates <em>x</em> = 0.25, 0.5, and 0.75, respectively. During this numerical investigation, the Full-Potential Linearized Augmented Plane Wave method (FP-LAPW) based on the Density Functional Theory (DFT) was employed. Total energy calculations and structure relaxations were carried out using the Perdew-Burke-Ernzerhof Generalized Gradient Approximation (PBE-GGA). For electronic properties, we adopted the Tran-Blaha-modified Becke-Johnson (TB-mBJ) function. According to phonon properties, cohesiveness, and formation energy, these alloys have strong thermodynamic stability and could be produced and synthesized experimentally in a laboratory. The structural parameters are in good agreement with the available results for all compounds. From the electronic properties, HfSi<sub>3</sub>O<sub>8</sub> has a small direct band gap in the Γ<sub>V</sub>-<!--> <!-->Γ<sub>C</sub> direction via GGA approximation, equal to 1.541 eV, indicating that the HfSi<sub>3</sub>O<sub>8</sub> material is one of the future-efficient materials for the solar cell fabrication process. However, HfSiO<sub>4</sub> and Hf<sub>3</sub>SiO<sub>8</sub> exhibit a large indirect band gap in the Γ<sub>V</sub>-M<sub>C</sub> direction, equal to 5.328 eV and 4.284 eV, using GGA approximation, respectively. Motivated by the prospect of using its interesting electronic structure for optoelectronic semiconductor applications, the optical properties of HfSi<sub>3</sub>O<sub>8</sub>, HfSiO<sub>4</sub>, and Hf<sub>3</sub>SiO<sub>8</sub> were studied. This numerical research highlights this material as the first of its kind in terms of optical properties. Given the scarcity of theoretical and experimental data, the current study may be useful for future research on these compounds. Our findings can thus pave the way for further research into the potential use of these oxide compounds in a variety of chemical, physical, and electrical applications aimed at meeting socioeconomic requirements.</div></div>","PeriodicalId":284,"journal":{"name":"Computational and Theoretical Chemistry","volume":"1241 ","pages":"Article 114894"},"PeriodicalIF":3.0,"publicationDate":"2024-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142422928","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Junkai Wang , Yixuan Cai , Shumin Yu , Qianku Hu , Aiguo Zhou , Shaowei Zhang
{"title":"First-principles investigation of methane to methanol conversion on Ti2CO2 MXene supported single-atom catalyst","authors":"Junkai Wang , Yixuan Cai , Shumin Yu , Qianku Hu , Aiguo Zhou , Shaowei Zhang","doi":"10.1016/j.comptc.2024.114892","DOIUrl":"10.1016/j.comptc.2024.114892","url":null,"abstract":"<div><div>Developing efficient catalysts for the conversion of methane (CH<sub>4</sub>) to methanol (CH<sub>3</sub>OH) remains a critical challenge in the chemical industry, with significant implications for both energy production and environmental sustainability. This study pioneers the exploration of the Sc/Ti-Ti<sub>2</sub>CO<sub>2</sub> single-atom catalysts (SACs) for this transformation, utilizing density functional theory (DFT) calculations. Notably, our findings reveal that Sc and Ti are uniquely stable on the Ti<sub>2</sub>CO<sub>2</sub> MXene surface, a discovery that could inform future catalyst designs. We also demonstrate that while CH<sub>4</sub> weakly physisorbs on the Sc/Ti-Ti<sub>2</sub>CO<sub>2</sub> surface, N<sub>2</sub>O molecules decompose directly into N<sub>2</sub> and highly reactive O* species, which bind with Sc/Ti to drive the catalytic process. The oxidation of CH<sub>4</sub> proceeds in two steps: CH<sub>4</sub> + O* → CH<sub>3</sub>* + OH* with reaction barriers of 0.58 eV (Sc) and 1.38 eV (Ti), followed by CH<sub>3</sub>* + OH* → CH<sub>3</sub>OH with barriers of 1.5 eV (Sc) and 1.61 eV (Ti). Importantly, the low desorption energy of CH<sub>3</sub>OH, especially on Sc (0.85 eV), highlights the exceptional catalytic potential of Sc/Ti<sub>2</sub>CO<sub>2</sub> for the direct conversion of CH<sub>4</sub> to CH<sub>3</sub>OH. These results not only underscore the feasibility of using MXene-based SACs for CH<sub>4</sub> oxidation but also provide a theoretical foundation for the development of highly efficient catalysts in this domain.</div></div>","PeriodicalId":284,"journal":{"name":"Computational and Theoretical Chemistry","volume":"1241 ","pages":"Article 114892"},"PeriodicalIF":3.0,"publicationDate":"2024-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142422803","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Fragmentation of disulfide bonds in the fragment molecular orbital method","authors":"Dmitri G. Fedorov","doi":"10.1016/j.comptc.2024.114885","DOIUrl":"10.1016/j.comptc.2024.114885","url":null,"abstract":"<div><div>The disulfide bond order is analyzed in terms of localized molecular orbitals. Several schemes of fragment boundaries are proposed for defining fragments in proteins with sulfur bridges, and their accuracy is evaluated for the three-body expansion of the fragment molecular orbital method. Interactions of the ligand ibuprofen with residues in prostaglandin H(2) synthase-1 (PDB: 1EQG) are analyzed at the MP2 level. The role of sulfur bridges in the protein stability and ligand binding is discussed.</div></div>","PeriodicalId":284,"journal":{"name":"Computational and Theoretical Chemistry","volume":"1241 ","pages":"Article 114885"},"PeriodicalIF":3.0,"publicationDate":"2024-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142422804","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Ab initio study of iron-doped zinc oxide for efficient dye degradation","authors":"Muhammad Abdul Moiz","doi":"10.1016/j.comptc.2024.114886","DOIUrl":"10.1016/j.comptc.2024.114886","url":null,"abstract":"<div><div>First principle calculations were performed on iron doped zinc oxide (Fe-ZO) to reduce its bandgap to optimize its visible light absorption. The doping of iron in the ZO is done via supercells of <em>Zn</em><sub>1-x</sub><em>Fe<sub>x</sub>O</em>. The doped systems are analyzed using generalized gradient approximation plane wave pseudopotential on density functional theory, or local density approximation and LDA + U with PBE. The computational analysis reveals that the bandgap reduced with increasing dopant concentration. Furthermore, a robust absorption is observed toward the visible region of the spectrum. This enhances its ability as a photochemical material to increase degradation rates of industrial grade dyes.</div></div>","PeriodicalId":284,"journal":{"name":"Computational and Theoretical Chemistry","volume":"1241 ","pages":"Article 114886"},"PeriodicalIF":3.0,"publicationDate":"2024-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142422805","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alia Semab , Ali Raza Ayub , Saba Zahid , Mohammed A. Amin , Mohammed Aljohani , Fahad M. Almutairi , Majid S. Jabir , Hasan Majdi , Tamer H.A. Hasanin , Rasheed Ahmad Khera
{"title":"A theoretical study on symmetrical non-fullerene electron acceptors molecules on BDTPT based derivatives to enhance photovoltaic properties of organic solar cells","authors":"Alia Semab , Ali Raza Ayub , Saba Zahid , Mohammed A. Amin , Mohammed Aljohani , Fahad M. Almutairi , Majid S. Jabir , Hasan Majdi , Tamer H.A. Hasanin , Rasheed Ahmad Khera","doi":"10.1016/j.comptc.2024.114891","DOIUrl":"10.1016/j.comptc.2024.114891","url":null,"abstract":"<div><div>An innovative and promising approach to developing sustainable energy solutions and promoting an eco-friendly society is the use of organic solar cells. The key component for a solution-processed bulk-heterojunction organic solar cell is the photoactive layer’s embedded donor and acceptor components. This research presents seven modified molecules comprising the A–D–A type structural configuration, entitled <strong>A1</strong>–<strong>A7</strong>. All these designed moieties exhibit marvelous outcomes in optoelectronic features, including λ<sub>max</sub> and band gap, owing to non-fullerene acceptors in the terminal regions. All these compounds are computationally assessed by employing B3LYP at 6-31G (d,p) basis set using chloroform solvent. Compared to the reference molecule, the designed molecules (<strong>A1</strong>, <strong>A2</strong>, <strong>A4</strong>, <strong>A5</strong>, <strong>A6</strong>, <strong>A7</strong>) have reflected breakthrough results. The prerequisite for directing the practical application of designed acceptors is the efficient charge transfer, evidenced by coupling the J61 donor complex with the designed <strong>A5</strong> acceptor.</div></div>","PeriodicalId":284,"journal":{"name":"Computational and Theoretical Chemistry","volume":"1241 ","pages":"Article 114891"},"PeriodicalIF":3.0,"publicationDate":"2024-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142422806","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Luis Ignacio Perea-Ramírez , Paulino Zerón , Luis Ángel Zárate-Hernández , Guadalupe Castro , Marcelo Galván , Marco Franco-Pérez , Myrna H. Matus , Julián Cruz
{"title":"Theoretical study of the oxidative desulfurization reaction in sulfur compounds present in crude oil","authors":"Luis Ignacio Perea-Ramírez , Paulino Zerón , Luis Ángel Zárate-Hernández , Guadalupe Castro , Marcelo Galván , Marco Franco-Pérez , Myrna H. Matus , Julián Cruz","doi":"10.1016/j.comptc.2024.114887","DOIUrl":"10.1016/j.comptc.2024.114887","url":null,"abstract":"<div><div>Oxidative desulfurization (ODS) has emerged as a highly promising and effective complementary technique to hydrodesulfurization for reducing sulfur content in fossil fuels. Notably, ODS demonstrates superior efficacy in removing challenging sulfur compounds (SCs) such as 4-methyldibenzothiophene and 4,6-dimethyldibenzothiophene. Therefore, it is imperative to unveil the molecular mechanisms underlying the ODS process and comprehend the reactivity properties of the participating species, offering insights to explain the mechanisms implicated. In this study, a thorough analysis of the reaction coordinate associated with the ODS process for a specific set of SCs was undertaken. The approach involved utilizing the Density Functional Theory and comparing the results with prior experimental observations to ensure the relevance of the findings in this study. In addition, reactivity trends were rationalized by applying temperature-dependent chemical reactivity theory. In this way, these results contribute to understanding the ODS process, which is essential to an environmentally friendly fuel production.</div></div>","PeriodicalId":284,"journal":{"name":"Computational and Theoretical Chemistry","volume":"1241 ","pages":"Article 114887"},"PeriodicalIF":3.0,"publicationDate":"2024-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142422934","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}