{"title":"","authors":"Ruben Szabó, Melinda Andrási and Attila Gáspár*, ","doi":"","DOIUrl":"","url":null,"abstract":"","PeriodicalId":27,"journal":{"name":"Analytical Chemistry","volume":"97 28","pages":"XXX-XXX XXX-XXX"},"PeriodicalIF":6.7,"publicationDate":"2025-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/pdf/10.1021/acs.analchem.5c02250","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144671528","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lukas Kopecky, Caroline J. Sands, María Gómez-Romero, Shivani Misra, Elizabeth J. Want and Timothy M. D. Ebbels*,
{"title":"","authors":"Lukas Kopecky, Caroline J. Sands, María Gómez-Romero, Shivani Misra, Elizabeth J. Want and Timothy M. D. Ebbels*, ","doi":"","DOIUrl":"","url":null,"abstract":"","PeriodicalId":27,"journal":{"name":"Analytical Chemistry","volume":"97 28","pages":"XXX-XXX XXX-XXX"},"PeriodicalIF":6.7,"publicationDate":"2025-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/pdf/10.1021/acs.analchem.5c01327","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144671611","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Cellular and Intravital ATP Imaging Using a Merocyanine-Hybrided Rhodamine Fluorescent Probe.","authors":"Zuo-Hu Chai,Gaowei Pan,Fujian Qi,Yu Zhang,Fang Dai,Shengxiang Zhang,Bo Zhou","doi":"10.1021/acs.analchem.5c02198","DOIUrl":"https://doi.org/10.1021/acs.analchem.5c02198","url":null,"abstract":"The real-time intravital imaging of adenosine triphosphate (ATP) is essential for comprehending the intricate relationship between energy metabolism and cellular functions. To develop highly effective molecular tools for intravital ATP imaging, herein we designed a merocyanine-hybrided rhodamine fluorescent probe named PCR. The advantages offered by this probe toward ATP include near-infrared excitation/emission (λex/λem = 700/758 nm), a rapid (<3 min) and reversible response, an ideal dissociation constant (Kd = 7.05 mM), a relatively low detection limit (36.9 μM), deep tissue penetration (180 μm), and two-photon excitability. With the aid of the probe, we successfully detected both exogenous and endogenous ATP generation in viable cells. Furthermore, we monitored dynamic fluctuations in ATP levels under various metabolic perturbations and observed an augmented ATP production in cancer cells relative to normal cells. Subsequently, our investigation unveiled that β-lapachone, a well-established anticancer agent, induces cancer cell death by triggering reactive oxygen species-dependent energy crisis. Lastly, we visualized oscillations in ATP levels during cerebral ischemia/reperfusion by examining HT-22 cells and live mouse brain. The aforementioned successful application showcases the probe's potential for further elucidating ATP function in intricate biological environments, particularly in vivo.","PeriodicalId":27,"journal":{"name":"Analytical Chemistry","volume":"25 1","pages":""},"PeriodicalIF":7.4,"publicationDate":"2025-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144684306","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Linghui Guo,Huiyun Zhang,Zigeng Zhao,Shouting Zhang,Wenping Hu
{"title":"Synthesis of Co/Ce Dual Active Sites Single-Atom Cerium Nanozyme with the Synergistic Effect and Peroxidase-like Activity for Total Antioxidant Capacity Evaluation.","authors":"Linghui Guo,Huiyun Zhang,Zigeng Zhao,Shouting Zhang,Wenping Hu","doi":"10.1021/acs.analchem.5c01219","DOIUrl":"https://doi.org/10.1021/acs.analchem.5c01219","url":null,"abstract":"The design and modulation of the catalytic activity of nanozymes are critical for advancing their development. In this study, a novel Ce-based single-atom nanozyme with Co/Ce dual-metal active sites (named Co-Ce@NC) was successfully synthesized. Co-Ce@NC exhibits excellent peroxidase-like (POD) activity, demonstrating both enhanced affinity and an accelerated reaction rate for H2O2. This may be attributed to the high single-atom loading (Ce: 9.61 wt %; Co: 0.46 wt %) caused by surface defects of the material and the synergistic effect between Co and Ce, which enhance the Ce3+/Ce4+ ratio and thereby rapidly trigger the production of reactive oxygen species (ROS) from H2O2. Based on the competition between ascorbic acid (AA) and ROS during the oxidation of TMB, a colorimetric platform was developed to detect the total antioxidant capacity (TAC). This platform was applied for detecting TAC in commercial beverages and fruits, indicating its significant potential for evaluating antioxidant quality in food. This study not only introduces a novel approach for enhancing the performance of Ce-based single-atom nanozymes but also emphasizes their broad applicability in TAC detection.","PeriodicalId":27,"journal":{"name":"Analytical Chemistry","volume":"16 1","pages":""},"PeriodicalIF":7.4,"publicationDate":"2025-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144684312","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Analytical ChemistryPub Date : 2025-07-22Epub Date: 2025-07-08DOI: 10.1021/acs.analchem.5c01142
Robbe Devreese, Alireza Nameni, Arthur Declercq, Emmy Terryn, Ralf Gabriels, Francis Impens, Kris Gevaert, Lennart Martens, Robbin Bouwmeester
{"title":"Collisional Cross-Section Prediction for Multiconformational Peptide Ions with IM2Deep.","authors":"Robbe Devreese, Alireza Nameni, Arthur Declercq, Emmy Terryn, Ralf Gabriels, Francis Impens, Kris Gevaert, Lennart Martens, Robbin Bouwmeester","doi":"10.1021/acs.analchem.5c01142","DOIUrl":"10.1021/acs.analchem.5c01142","url":null,"abstract":"<p><p>Peptide collisional cross-section (CCS) prediction is complicated by the tendency of peptide ions to exhibit multiple conformations in the gas phase. This adds further complexity to downstream analysis of proteomics data, for example for identification or quantification through feature finding. Here, we present an improved version of IM2Deep that is trained on a carefully curated data set to predict CCS values of multiconformational peptides. The training data is derived from a large and comprehensive set of publicly available data sets. This comprehensive training data set together with a tailored architecture allows for the accurate CCS prediction of multiple peptide conformational states. Furthermore, the enhanced IM2Deep model also retains high precision for peptides with a single observed conformation. IM2Deep is publicly available under a permissive open-source license at https://github.com/compomics/IM2Deep.</p>","PeriodicalId":27,"journal":{"name":"Analytical Chemistry","volume":" ","pages":"15113-15121"},"PeriodicalIF":6.7,"publicationDate":"2025-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144582622","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"In Vivo Identification and Spatial Distribution of Crown Gall Disease Biomarkers in Grapevine.","authors":"Trong Nguyen-Huu,Nina Ogrinc,Léa Ledoux,Cédric Jacquard,Isabelle Kerzaon,Céline Lavire,Christophe Clément,Michel Salzet,Ludovic Vial,Lisa Sanchez,Isabelle Fournier","doi":"10.1021/acs.analchem.5c02019","DOIUrl":"https://doi.org/10.1021/acs.analchem.5c02019","url":null,"abstract":"Grapevine crown gall is caused by the tumorigenic bacterium Allorhizobium vitis. The fight against this disease is a major challenge in viticulture since this pathogen can systemically colonize the plant host, persisting in vineyards once infected. Understanding the dynamics of the plant-pathogen relationship not only improves our knowledge of plant biology but also could lead to innovative strategies for sustainable agricultural practices. In this way, this study aimed to gain insights into metabolic changes occurring in the tumor induced by A. vitis, using two techniques, Water-Assisted Laser Desorption/Ionization Mass Spectrometry (WALDI) and Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Imaging (MALDI MSI). We highlighted compounds such as phenolics alongside specific lipids acting as stress signaling regulators. Moreover, vitopine, produced after plant cell transformation by A. vitis and exclusively found in infected plants, was successfully identified by real time detection by SpiderMass and localized for the first time through MSI. We illustrate here the effectiveness of SpiderMass and MSI in identifying biomarkers of grapevine crown gall, enhancing our understanding of plant responses to bacterial infection. These techniques allow for real-time analysis and spatial distribution mapping of metabolites, paving the way for future research and potential applications in diagnostics.","PeriodicalId":27,"journal":{"name":"Analytical Chemistry","volume":"110 1","pages":""},"PeriodicalIF":7.4,"publicationDate":"2025-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144678244","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}