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Molecular and biological properties of the African swine fever virus (Asfarviridae: <i>Asfivirus</i>) isolate ASF/Tatarstan 20/WB-12276 非洲猪瘟病毒ASF/Tatarstan 20/WB-12276分离株的分子和生物学特性(Asfivirus&lt; i&gt;Asfivirus&lt;/i&gt;
Voprosy virusologii Pub Date : 2023-09-21 DOI: 10.36233/0507-4088-182
Andrey R. Shotin, Roman S. Chernyshev, Elizaveta O. Morozova, Alexey S. Igolkin, Konstantin N. Gruzdev, Ivan S. Kolbin, Ivan A. Lavrentiev, Ali Mazloum
{"title":"Molecular and biological properties of the African swine fever virus (Asfarviridae: &lt;i&gt;Asfivirus&lt;/i&gt;) isolate ASF/Tatarstan 20/WB-12276","authors":"Andrey R. Shotin, Roman S. Chernyshev, Elizaveta O. Morozova, Alexey S. Igolkin, Konstantin N. Gruzdev, Ivan S. Kolbin, Ivan A. Lavrentiev, Ali Mazloum","doi":"10.36233/0507-4088-182","DOIUrl":"https://doi.org/10.36233/0507-4088-182","url":null,"abstract":"Introduction. Up-to-date data and full characterization of circulating ASFV isolates play a crucial role in virus eradication and control in endemic regions and countries.&#x0D; The aim of the study was to evaluate and characterize the molecular and biological properties of the ASFV isolate ASF/Tatarstan 20/WB-12276, conduct phylogenetic analysis, and compare the results with isolates circulating in Europe and Asia.&#x0D; Materials and methods. For bioassay, eight heads of the Large White pigs weighing 1520 kg/head were used. Detection of specific anti-ASFV antibodies by ELISA and immunoperoxidase method. Detection of ASFV genome was performed by qPCR. Isolation of ASF/Tatarstan 20/WB-12276 and determination of titer were performed in pig spleen cell culture. Sequencing was carried out by the Sanger method.&#x0D; Results. The virus was characterized as highly virulent and capable of causing acute to subacute forms of ASF. Phylogenetic analysis revealed substitutions in the genome of the ASF/Tatarstan 20/WB-12276 isolate (IGR/I73R-I329L and I267L markers) that supported the clustering of the studied variant with isolates prevalent in most of Europe and Asia.&#x0D; Conclusion. For the first time, the molecular and biological properties of the ASF/Tatarstan 20/WB-12276 virus isolate taken from a wild boar shot on the territory of the Republic of Tatarstan were studied and analyzed.","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"19 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136154084","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic features of the Puumala virus (Hantaviridae: <i>Orthohantavirus</i>) identified in the Moscow region 在莫斯科地区发现的普玛拉病毒(汉坦病毒科:&lt;i&gt;正汉坦病毒&lt;/i&gt;)的遗传特征
Voprosy virusologii Pub Date : 2023-09-21 DOI: 10.36233/0507-4088-177
Ekaterina A. Blinova, Marat T. Makenov, Evgeny S. Morozkin, Ivan S. Kholodilov, Marina V. Fedorova, Olga B. Zhurenkova, German V. Roev, Kamil F. Khafizov, Ludmila S. Karan
{"title":"Genetic features of the Puumala virus (Hantaviridae: &lt;i&gt;Orthohantavirus&lt;/i&gt;) identified in the Moscow region","authors":"Ekaterina A. Blinova, Marat T. Makenov, Evgeny S. Morozkin, Ivan S. Kholodilov, Marina V. Fedorova, Olga B. Zhurenkova, German V. Roev, Kamil F. Khafizov, Ludmila S. Karan","doi":"10.36233/0507-4088-177","DOIUrl":"https://doi.org/10.36233/0507-4088-177","url":null,"abstract":"Introduction. Puumala virus (family Hantaviridae, genus Orthohantavirus) is distributed in most regions of the European part of Russia. However, information about its genetic variants circulating on the territory of the Central Federal District is extremely scarce.&#x0D; Materials and methods. Rodents tissue samples were tested after reverse transcription by PCR for the presence of hantaviral RNA. The amplified fragments of the L segment were sequenced by the Sanger method. For two samples, sequences of all three segments were obtained using the NGS method. Phylogenetic trees were built in the MEGA-X software.&#x0D; Results. Puumala virus was found in six samples. Based on the phylogenetic analysis of sequences of three segments, the obtained genetic variants belong to the sublineage previously designated as W-RUS.&#x0D; Conclusion. A genetic variant of the Puumala virus, belonging to the subline W-RUS, circulates on the territory of the Volokolamsk district of Moscow region.","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"72 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136152318","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The adjuvant effect of polymuramil, a NOD1 and NOD2 agonist, differs when immunizing mice of different inbred lines with nonstructural hepatitis C virus (Flaviviridae: <i>Hepacivirus</i>)proteins and is synergistically enhanced in combination with pyrogenalum, a TLR4 agonist 当用非结构性丙型肝炎病毒(黄病毒科:&lt;i&gt;Hepacivirus&lt;/i&gt;)蛋白免疫不同近交系的小鼠时,NOD1和NOD2激动剂polymuramil的佐剂效果不同,与TLR4激动剂热原醛(pyrogenalum)联合使用时,佐剂效果增强
Voprosy virusologii Pub Date : 2023-09-21 DOI: 10.36233/0507-4088-183
Ekaterina I. Lesnova, Olga V. Masalova, Kristina Yu. Permyakova, Natalia A. Demidova, Vladimir T. Valuev-Elliston, Alexandr V. Ivanov, Alla A. Kushch
{"title":"The adjuvant effect of polymuramil, a NOD1 and NOD2 agonist, differs when immunizing mice of different inbred lines with nonstructural hepatitis C virus (Flaviviridae: &lt;i&gt;Hepacivirus&lt;/i&gt;)proteins and is synergistically enhanced in combination with pyrogenalum, a TLR4 agonist","authors":"Ekaterina I. Lesnova, Olga V. Masalova, Kristina Yu. Permyakova, Natalia A. Demidova, Vladimir T. Valuev-Elliston, Alexandr V. Ivanov, Alla A. Kushch","doi":"10.36233/0507-4088-183","DOIUrl":"https://doi.org/10.36233/0507-4088-183","url":null,"abstract":"Introduction. Hepatitis C is a liver disease with high chronicity, the cause of cirrhosis and hepatocarcinoma. The main obstacle to controlling hepatitis C is the lack of vaccines.&#x0D; The aim of the work was to compare the immunogenic activity of nonstructural recombinant proteins NS3, NS4 and NS5B of hepatitis C virus (HCV) as components of a subunit candidate vaccine and to analyze the adjuvant properties of two available commercial drugs, polymuramil and pyrogenalum.&#x0D; Materials and methods. BALB/c, DBA/2J and C57BL/6 mice were immunized with nonstructural proteins without adjuvants or with polymuramyl (NOD1 and NOD2 agonist) and pyrogenalum (TLR-4 agonist). The activity of antibodies was determined in ELISA, the cellular response by antigen-specific lymphocyte proliferation and by production of IFN- in vitro.&#x0D; Results. Recombinant proteins showed different immunogenicity. NS4 induced antibodies more efficiently than NS3 and NS5B. Significant differences were found in the immune response of three inbred lines mice: the level of IFN- in BALB/c and DBA/2J mice induced by NS5B protein was 30 times higher than in C57Bl/6 mice. In contrast, the induction of antibodies in BALB/c mice was lower than in C57Bl/6 and DBA/2J. Polymuramil did not increase the humoral response to NS5B and enhanced the cellular response only in C57BL/6 mice. The combined use of polymuramil with pyrogenalum significantly increased both the humoral and cellular response of mice to all recombinant HCV proteins.&#x0D; Conclusion. Different immunogenic properties and different functions of recombinant non-structural HCV proteins indicate the feasibility of their combined inclusion in subunit vaccines. It was established for the first time that immunization with HCV proteins with a complex adjuvant (polymuramyl + pyrogenalum) has a synergistic effect, significantly exceeding the effect of each of them separately.","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"46 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136235947","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characteristics of self-regulation of the epidemic process of infection caused by the Epstein–Barr virus (Herpesviridae: <i>Lymphocryptovirus</i>, HHV-4) 爱泼斯坦-巴尔病毒(疱疹病毒科:&lt;i&gt;淋巴隐病毒&lt;/i&gt; HHV-4)感染流行过程的自我调节特征
Voprosy virusologii Pub Date : 2023-09-21 DOI: 10.36233/0507-4088-170
Tatyana V. Solomay, Tatiana A. Semenenko, Vasiliy G. Akimkin
{"title":"Characteristics of self-regulation of the epidemic process of infection caused by the Epstein–Barr virus (Herpesviridae: &lt;i&gt;Lymphocryptovirus&lt;/i&gt;, HHV-4)","authors":"Tatyana V. Solomay, Tatiana A. Semenenko, Vasiliy G. Akimkin","doi":"10.36233/0507-4088-170","DOIUrl":"https://doi.org/10.36233/0507-4088-170","url":null,"abstract":"Introduction. Among the available scientific literature, there are no publications addressing processes of self-regulation in the parasite-host population systems with reference to chronic infections, including the infection caused by the EpsteinBarr virus (EBV infection).&#x0D; The aim of the study is to assess manifestations of the epidemic process of chronic EBV infection through the lens of the basic tenets of the theory of self-regulation of parasitic systems.&#x0D; Materials and methods. The study was performed using data from scientific publications selected from such database sources as Scopus, Web of Science, Cochrane Library, PubMed, CyberLeninka, RSCI, etc. The list of analyzed publications included published articles of the authors of this study, reporting the results of the retrospective epidemiological analysis of the incidence of infectious mononucleosis in Russia in general and in Moscow in particular, as well as the results of the laboratory tests regarding the detection frequency of specific antibodies to EBV proteins.&#x0D; Results. The chronic course of EBV infection promotes a close long-term interaction between the pathogen and the host. The genetic variability of the pathogen and the functions of specific and nonspecific human immune defense systems play a key role in the interaction between two heterogeneous populations and underlie their phasal self-transformation. A variety of social and natural factors (adverse chemical, physical, biological, climatic impacts, etc.) trigger the reactivation of chronic EBV infection, thus providing the continuous existence of additional sources of infection in the host population.&#x0D; Conclusion. The analysis of the manifestations of chronic EBV infection in the context of the theory of self-regulation of parasitic systems promotes the understanding of the factors underlying the unevenness of its epidemic process. The obtained data can be adjusted for other infections having similar transmission mechanisms and virus life cycles (including other herpes infections) to map out strategies to control the epidemic process of chronic infections spread by aerosol transmission of the pathogen.","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"3 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136154094","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Frequency of drug resistance and immune escape mutations in the hepatitis B virus genome detected in pregnant women in the Republic of Guinea]. [几内亚共和国孕妇中检测到的乙型肝炎病毒基因组耐药和免疫逃逸突变的频率]。
Voprosy virusologii Pub Date : 2023-07-06 DOI: 10.36233/0507-4088-175
T Balde, Y V Ostankova, S Boumbaly, E V Naidenova, E B Zueva, E N Serikova, D E Valutite, A N Schemelev, V S Davydenko, E V Esaulenko, A A Totolian
{"title":"[Frequency of drug resistance and immune escape mutations in the hepatitis B virus genome detected in pregnant women in the Republic of Guinea].","authors":"T Balde,&nbsp;Y V Ostankova,&nbsp;S Boumbaly,&nbsp;E V Naidenova,&nbsp;E B Zueva,&nbsp;E N Serikova,&nbsp;D E Valutite,&nbsp;A N Schemelev,&nbsp;V S Davydenko,&nbsp;E V Esaulenko,&nbsp;A A Totolian","doi":"10.36233/0507-4088-175","DOIUrl":"https://doi.org/10.36233/0507-4088-175","url":null,"abstract":"<p><p>The aim of the work is to assess the prevalence of hepatitis B virus drug resistance mutations and immune escape mutations in pregnant women in the Republic of Guinea.</p><p><strong>Materials and methods: </strong>Blood plasma samples obtained from 480 pregnant women from different regions of the Republic of Guinea with laboratory-confirmed viral hepatitis B were studied. Nucleotide sequences for genotype identification and mutation detection were obtained using nested-PCR followed by Sanger sequencing, based on overlapping pairs of primers spanning the complete genome of the virus.</p><p><strong>Results and discussion: </strong>In the examined group, the viral genotype E was the most prevalent (92.92%) compared with subgenotypes A1 (1.67%), A3 (1.46%), D1 (0.63%), D2 (1.04%) and D3 (2.29%). Among the examined HBV-infected pregnant women, 188 (39.17%) had undetectable HBsAg. Drug resistance mutations were detected in 33 individuals, which amounted to 6.88%. The following mutations were found: S78T (27.27%), L80I (24.24%), S202I (15.15%), M204I/V (42.42%). The presence of polymorphic variants not described as drug resistant has also been shown in positions associated with the development of drug resistance to tenofovir, lamivudine, telbivudine and entecavir (L80F, S202I, M204R). When analyzing the MHR and the region of a determinant, mutations were detected in 318 (66.25%) of pregnant women. In 172 of them, which amounted to 54.09%, multiple mutations were found. The amino acid substitutions in 13 positions associated with HBsAg-negative hepatitis B and/or potentially affecting HBsAg antigenicity were identified.</p><p><strong>Conclusion: </strong>The high prevalence of immune escape and drug resistance mutations potentially associated with false-negative result of HBsAg screening, prophylaxis failure, and virological failure of therapy that has been identified among treatment naive pregnant women imposes a serious problem.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 3","pages":"228-241"},"PeriodicalIF":0.0,"publicationDate":"2023-07-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9818950","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Analysis of resistance-associated substitutions in hepatitis C virus sequences from Kyrgyzstan]. [吉尔吉斯斯坦丙型肝炎病毒耐药相关替换序列分析]。
Voprosy virusologii Pub Date : 2023-07-06 DOI: 10.36233/0507-4088-176
M Y Kartashov, K A Svirin, A A Bekbolotov, K T Momusheva, B M Iskanova, A S Solpueva, U T Motorov, E B Narmatova, E I Krivosheina, A V Gladysheva, E V Chub, N M Gashnikova
{"title":"[Analysis of resistance-associated substitutions in hepatitis C virus sequences from Kyrgyzstan].","authors":"M Y Kartashov,&nbsp;K A Svirin,&nbsp;A A Bekbolotov,&nbsp;K T Momusheva,&nbsp;B M Iskanova,&nbsp;A S Solpueva,&nbsp;U T Motorov,&nbsp;E B Narmatova,&nbsp;E I Krivosheina,&nbsp;A V Gladysheva,&nbsp;E V Chub,&nbsp;N M Gashnikova","doi":"10.36233/0507-4088-176","DOIUrl":"https://doi.org/10.36233/0507-4088-176","url":null,"abstract":"<p><strong>Introduction: </strong>The countries of Central Asia, including Kyrgyzstan, are characterized by high prevalence and morbidity of HCV infection. Identification of HCV genotype and mutations associated with resistance to direct-acting antiviral (DAA) plays an important role either in conducting molecular epidemiological studies or choosing the treatment tactics. The aim of the work was to research of the genotype diversity of HCV variants circulating in Kyrgyzstan and the identification among them the mutations associated with the development of resistance to DAA.</p><p><strong>Materials and methods: </strong>38 serum samples from HCV-infected residents of Kyrgyzstan were analyzed in this study. The nucleotide sequences of viral gene fragments (NS3, NS5A, NS5B) were determined by Sangers sequencing and deposited in the international GenBank database under the numbers ON841497ON841534 (NS5B), ON841535ON841566 (NS5A), and ON841567ON841584 (NS3).</p><p><strong>Results: </strong>The HCV subtypes 1b (52.6%; 95% CI 37.367.5%), 3a (44.8%; 95% CI 30.260.2%) and 1a (2.6%; 95% CI 0.513.4%) are circulating in Kyrgyzstan. 37% (95% CI 1959%) of subtype 1b isolates had C316N mutation in the NS5A gene; 46% (95% CI 2370%) had F37L mutation in the NS5A gene; 45% (95% CI 2272%) had Y56F mutation in the NS3 gene. Among subtype 3a isolates, resistance-associated mutations in NS5B fragment were not found. 22% (95% CI 945%) of subtype 3a sequences had a Y93H mutation in the NS5A gene. A combination of Y56F + Q168 + I170 mutations was identified among all sequences of NS3 gene. DAA resistance mutations were not found in NS3, NS5A, NS5B genes of subtype 1a sequence.</p><p><strong>Conclusion: </strong>A rather high prevalence of mutations associated with resistance or significant decrease in sensitivity to DAA among HCV sequences from Kyrgyzstan was shown. Updating of data on HCV genetic diversity is necessary for timely planning of measures to combat epidemic.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 3","pages":"265-270"},"PeriodicalIF":0.0,"publicationDate":"2023-07-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9815545","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
[Intranasal vaccine against COVID-19 based on a recombinant variant of the Sendai virus (Paramyxoviridae: Respirovirus) strain Moscow]. [基于仙台病毒(副粘病毒科:呼吸道病毒)莫斯科株重组变体的COVID-19鼻内疫苗]。
Voprosy virusologii Pub Date : 2023-07-06 DOI: 10.36233/0507-4088-172
G A Kudrov, S S Zainutdinov, A A Grazhdantseva, A V Shipovalov, G F Sivolobova, A V Semenova, I A Merkuleva, D N Shcherbakov, O S Taranov, A V Zaykovskaya, I S Shulgina, O V Pyankov, G V Kochneva
{"title":"[Intranasal vaccine against COVID-19 based on a recombinant variant of the Sendai virus (Paramyxoviridae: <i>Respirovirus</i>) strain Moscow].","authors":"G A Kudrov,&nbsp;S S Zainutdinov,&nbsp;A A Grazhdantseva,&nbsp;A V Shipovalov,&nbsp;G F Sivolobova,&nbsp;A V Semenova,&nbsp;I A Merkuleva,&nbsp;D N Shcherbakov,&nbsp;O S Taranov,&nbsp;A V Zaykovskaya,&nbsp;I S Shulgina,&nbsp;O V Pyankov,&nbsp;G V Kochneva","doi":"10.36233/0507-4088-172","DOIUrl":"https://doi.org/10.36233/0507-4088-172","url":null,"abstract":"<p><strong>Introduction: </strong>Intranasal vaccination using live vector vaccines based on non-pathogenic or slightly pathogenic viruses is the one of the most convenient, safe and effective ways to prevent respiratory infections, including COVID-19. Sendai virus is the best suited for this purpose, since it is respiratory virus and is capable of limited replication in human bronchial epithelial cells without causing disease. The aim of the work is to design and study the vaccine properties of recombinant Sendai virus, Moscow strain, expressing secreted receptor-binding domain of SARS-CoV-2 Delta strain S protein (RBDdelta) during a single intranasal immunization.</p><p><strong>Materials and methods: </strong>Recombinant Sendai virus carrying insertion of RBDdelta transgene between P and M genes was constructed using reverse genetics and synthetic biology methods. Expression of RBDdelta was analyzed by Western blot. Vaccine properties were studied in two models: Syrian hamsters and BALB/c mice. Immunogenicity was evaluated by ELISA and virus-neutralization assays. Protectiveness was assessed by quantitation of SARS-CoV-2 RNA in RT-PCR and histological analysis of the lungs.</p><p><strong>Results: </strong>Based on Sendai virus Moscow strain, a recombinant Sen-RBDdelta(M) was constructed that expressed a secreted RBDdelta immunologically identical to natural SARS-CoV-2 protein. A single intranasal administration of Sen-RBDdelta(M) to hamsters and mice significantly, by 15 and 107 times, respectively, reduced replicative activity of SARS-CoV-2 in lungs of animals, preventing the development of pneumonia. An effective induction of virus-neutralizing antibodies has also been demonstrated in mice.</p><p><strong>Conclusion: </strong>Sen-RBDdelta(M) is a promising vaccine construct against SARS-CoV-2 infection and has a protective properties even after a single intranasal introduction.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 3","pages":"215-227"},"PeriodicalIF":0.0,"publicationDate":"2023-07-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9812954","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
[Development and preservation of specific T-cell immunity after COVID-19 or vaccination against this infection]. [在COVID-19或针对这种感染的疫苗接种后特异性t细胞免疫的发展和保存]。
Voprosy virusologii Pub Date : 2023-07-06 DOI: 10.36233/0507-4088-171
M S Blyakher, I M Fedorova, E A Tulskaya, I V Kapustin, S I Koteleva, Z K Ramazanova, E E Odintsov, S V Sandalova, L I Novikova, A V Aleshkin, S S Bochkareva
{"title":"[Development and preservation of specific T-cell immunity after COVID-19 or vaccination against this infection].","authors":"M S Blyakher,&nbsp;I M Fedorova,&nbsp;E A Tulskaya,&nbsp;I V Kapustin,&nbsp;S I Koteleva,&nbsp;Z K Ramazanova,&nbsp;E E Odintsov,&nbsp;S V Sandalova,&nbsp;L I Novikova,&nbsp;A V Aleshkin,&nbsp;S S Bochkareva","doi":"10.36233/0507-4088-171","DOIUrl":"https://doi.org/10.36233/0507-4088-171","url":null,"abstract":"<p><p>Aim evaluation of specific T-cell immunity against SARS-CoV-2 in primary and secondary response to virus antigens by screening method.</p><p><strong>Materials and methods: </strong>Patients were tested 11.5 months after COVID-19 and 610 months before and after vaccination. Healthy volunteers were screened before, 26 times during the vaccination course, and 68 months after revaccination with the Sputnik V vaccine. IgG and IgM antibodies to SARS-CoV-2 were detected by ELISA using commercially available kits (Vector-Best, Russia). Antigenic (AG) activation of T cells in the fraction of bloods mononuclear cells was assessed by IFN- production after AG stimulation in the wells of plates from ELISA kits intended for detection of antibodies against SARS-CoV-2. Data were processed by MS Excel and Statistica 10.0 software.</p><p><strong>Results: </strong>AG-specific T cells were detected in 88.5% of vaccinated healthy volunteers, half of whom were found to have T cells appearing earlier than antibodies to AG. After 6-8 months, the level of AG activation decreases. Following the revaccination, the level of AG activation of memory T cells in vitro increases within six months in 76.9100.0% of vaccinated subjects. On the contrary, after COVID-19, 86.7% of individuals had in their blood the AG-specific T cells with high activity at the time of vaccination. The activity of T cells recognizing the RBD domain of the SARS-CoV-2 S protein and the proportion of individuals who had these cells in their blood increased after the vaccination of reconvalescents.</p><p><strong>Conclusion: </strong>T-cell immunity against SARS-CoV-2 antigens has been shown to persist for 6 months after illness. In vaccinated individuals without history of COVID-19, such duration of the preservation of AG-specific T cells in blood was only achieved after the revaccination.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 3","pages":"205-214"},"PeriodicalIF":0.0,"publicationDate":"2023-07-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9815544","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Mathematical model for assessing the level of cross-immunity between strains of influenza virus subtype H3N2]. [流感病毒H3N2亚型毒株间交叉免疫水平评估的数学模型]。
Voprosy virusologii Pub Date : 2023-07-06 DOI: 10.36233/0507-4088-179
M N Asatryan, B I Timofeev, I S Shmyr, K R Khachatryan, D N Shcherbinin, T A Timofeeva, E R Gerasimuk, V G Agasaryan, I F Ershov, T I Shashkova, O L Kardymon, N V Ivanisenko, T A Semenenko, B S Naroditsky, D Y Logunov, A L Gintsburg
{"title":"[Mathematical model for assessing the level of cross-immunity between strains of influenza virus subtype H<sub>3</sub>N<sub>2</sub>].","authors":"M N Asatryan,&nbsp;B I Timofeev,&nbsp;I S Shmyr,&nbsp;K R Khachatryan,&nbsp;D N Shcherbinin,&nbsp;T A Timofeeva,&nbsp;E R Gerasimuk,&nbsp;V G Agasaryan,&nbsp;I F Ershov,&nbsp;T I Shashkova,&nbsp;O L Kardymon,&nbsp;N V Ivanisenko,&nbsp;T A Semenenko,&nbsp;B S Naroditsky,&nbsp;D Y Logunov,&nbsp;A L Gintsburg","doi":"10.36233/0507-4088-179","DOIUrl":"https://doi.org/10.36233/0507-4088-179","url":null,"abstract":"<p><strong>Introduction: </strong>The WHO regularly updates influenza vaccine recommendations to maximize their match with circulating strains. Nevertheless, the effectiveness of the influenza A vaccine, specifically its H3N2 component, has been low for several seasons. The aim of the study is to develop a mathematical model of cross-immunity based on the array of published WHO hemagglutination inhibition assay (HAI) data.</p><p><strong>Materials and methods: </strong>In this study, a mathematical model was proposed, based on finding, using regression analysis, the dependence of HAI titers on substitutions in antigenic sites of sequences. The computer program we developed can process data (GISAID, NCBI, etc.) and create real-time databases according to the set tasks.</p><p><strong>Results: </strong>Based on our research, an additional antigenic site F was identified. The difference in 1.6 times the adjusted R2, on subsets of viruses grown in cell culture and grown in chicken embryos, demonstrates the validity of our decision to divide the original data array by passage histories. We have introduced the concept of a degree of homology between two arbitrary strains, which takes the value of a function depending on the Hamming distance, and it has been shown that the regression results significantly depend on the choice of function. The provided analysis showed that the most significant antigenic sites are A, B, and E. The obtained results on predicted HAI titers showed a good enough result, comparable to similar work by our colleagues.</p><p><strong>Conclusion: </strong>The proposed method could serve as a useful tool for future forecasts, with further study to confirm its sustainability.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 3","pages":"252-264"},"PeriodicalIF":0.0,"publicationDate":"2023-07-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9805825","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[The rapid ELISA method for detection of orthopoxviruses]. ELISA快速检测正痘病毒的方法。
Voprosy virusologii Pub Date : 2023-07-06 DOI: 10.36233/0507-4088-178
N D Ushkalenko, A V Ersh, P V Filatov, A G Poltavchenko
{"title":"[The rapid ELISA method for detection of orthopoxviruses].","authors":"N D Ushkalenko,&nbsp;A V Ersh,&nbsp;P V Filatov,&nbsp;A G Poltavchenko","doi":"10.36233/0507-4088-178","DOIUrl":"https://doi.org/10.36233/0507-4088-178","url":null,"abstract":"<p><strong>Introduction: </strong>Following the successful eradication of smallpox, mass vaccination against this disease was discontinued in 1980. The unvaccinated population continues to be at risk of infection due to military use of variola virus or exposure to monkeypox virus in Africa and non-endemic areas. In cases of these diseases, rapid diagnosis is of great importance, since the promptness and effectiveness of therapeutic and quarantine measures depend on it. The aim of work is to develop a kit of reagents for enzyme-linked immunosorbent assay (ELISA) for fast and highly sensitive detection of orthopoxviruses (OPV) in clinical samples.</p><p><strong>Materials and methods: </strong>The efficiency of virus detection was evaluated by single-stage ELISA in the cryolisate of CV-1 cell culture samples infected with vaccinia, cowpox, rabbitpox, and ectromelia viruses, as well as in clinical samples of infected rabbits and mice.</p><p><strong>Results: </strong>The method of rapid ELISA was shown to allow the detection of OPV in crude viral samples in the range of 5.0 1025.0 103 PFU/ml, and in clinical samples with a viral load exceeding 5 103 PFU/ml.</p><p><strong>Conclusions: </strong>The assay involves a minimum number of operations and can be performed within 45 minutes, which makes it possible to use it in conditions of a high level of biosecurity. Rapid ELISA method was developed using polyclonal antibodies, which significantly simplifies and reduces the cost of manufacturing a diagnostic system.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 3","pages":"242-251"},"PeriodicalIF":0.0,"publicationDate":"2023-07-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9805824","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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