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Application of reverse genetics system to Chikungunya virus study 在基孔肯雅病毒研究中应用反向遗传学系统
IF 2.8 3区 医学
Virology Pub Date : 2025-02-27 DOI: 10.1016/j.virol.2025.110465
Youichi Suzuki
{"title":"Application of reverse genetics system to Chikungunya virus study","authors":"Youichi Suzuki","doi":"10.1016/j.virol.2025.110465","DOIUrl":"10.1016/j.virol.2025.110465","url":null,"abstract":"<div><div>Chikungunya virus (CHIKV) is an enveloped RNA virus of the <em>Togaviridae</em> family that causes Chikungunya fever, characterized by fever, myalgia, and arthralgia. Although the mortality rate attributed to CHIKV infection is low, the risk of severe disease increases in young children, the elderly, and people with medical conditions. Given the significant impact of these clinical manifestations, an effective regimen for the treatment of CHIKV infection is needed. The reverse genetics system, an approach to generate a complete virus from cloned cDNA, has been widely used to characterize the replication and pathogenicity of medically important viruses. In particular, the implementation of reverse genetics allows researchers to manipulate the viral genome <em>in vitro</em>, contributing to the development of vaccines and antivirals. This review will present the status of the application of the reverse genetics system to advance knowledge of the biological aspects of CHIKV and summarize how this technology is being used to establish preventive and therapeutic measures against CHIKV infection.</div></div>","PeriodicalId":23666,"journal":{"name":"Virology","volume":"605 ","pages":"Article 110465"},"PeriodicalIF":2.8,"publicationDate":"2025-02-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143534066","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
vB_Ent31 bacteriophage may combat Enterobacter cloacae infections with macrophage modulating activity
IF 2.8 3区 医学
Virology Pub Date : 2025-02-25 DOI: 10.1016/j.virol.2025.110463
Mengyuan Li , Jiayue Ma , Xiaoshuang Feng , Naijin Zheng , Hong Li , Xue Chi , Xiang Ma , Yanqiong Tang , Juanjuan Li , Zhu Liu
{"title":"vB_Ent31 bacteriophage may combat Enterobacter cloacae infections with macrophage modulating activity","authors":"Mengyuan Li ,&nbsp;Jiayue Ma ,&nbsp;Xiaoshuang Feng ,&nbsp;Naijin Zheng ,&nbsp;Hong Li ,&nbsp;Xue Chi ,&nbsp;Xiang Ma ,&nbsp;Yanqiong Tang ,&nbsp;Juanjuan Li ,&nbsp;Zhu Liu","doi":"10.1016/j.virol.2025.110463","DOIUrl":"10.1016/j.virol.2025.110463","url":null,"abstract":"<div><div>Multidrug-resistant organisms (MDRO), including MDR <em>Enterobacter</em> cloacae, may emerge due to the extensive usage of antibiotics and threaten the lives of millions of people around the world. Developing new antibiotic-free strategies to combat <em>E. cloacae</em> infections and curb the spread of drug-resistant genes is crucial. Bacteriophage therapy has garnered widespread attention as a promising approach to tackle bacterial infections. Herein, we isolated a specific bacteriophage (vB_Ent31) targeting <em>E. cloacae</em> from sewage using <em>E. cloacae</em> Ent31 as the host bacterium. vB_Ent31 is a tadpole-like phage with double-stranded DNA belonging to the <em>Siphoviridae</em> family. It exhibits narrow-spectrum activity against <em>Enterobacter</em> spp. and remains stable across a temperature range of 4–50 °C and pH 4 to 11. Significantly, vB_Ent31 prevents proliferation of Ent31 and inhibits inflammation, which further accelerate wound healing. Our findings suggest that bacteriophage therapy could offer an alternative to combating drug-resistant bacteria.</div></div>","PeriodicalId":23666,"journal":{"name":"Virology","volume":"605 ","pages":"Article 110463"},"PeriodicalIF":2.8,"publicationDate":"2025-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143511328","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The role of lactylation in virology
IF 2.8 3区 医学
Virology Pub Date : 2025-02-25 DOI: 10.1016/j.virol.2025.110466
Sirui Wang , Leiliang Zhang
{"title":"The role of lactylation in virology","authors":"Sirui Wang ,&nbsp;Leiliang Zhang","doi":"10.1016/j.virol.2025.110466","DOIUrl":"10.1016/j.virol.2025.110466","url":null,"abstract":"<div><div>Lactylation, a novel post-translational protein modification, is increasingly recognized for its widespread occurrence on lysine residues in both histone and non-histone proteins. Recent research has primarily focused on its implications in specific human diseases, particularly cancer progression, metabolic disorders, neurodegenerative diseases, and immune responses. However, it is crucial to acknowledge the significant roles played by viruses as pathogens in both clinical and veterinary medicine, as well as in zoological and phytopathological studies. This review highlights the latest advancements in understanding the mechanisms underlying lactylation and its regulation, emphasizing the role of lactylation in certain viruses. We discuss its involvement in essential biological functions, the pathogenic mechanisms of various viruses, host-virus interactions, and practical applications, including the potential for lactylation to serve as a therapeutic target in disease pathogenesis. Exploring the interactions between viruses and lactylation presents a promising research direction that may help refine the emerging concept of lactylation.</div></div>","PeriodicalId":23666,"journal":{"name":"Virology","volume":"605 ","pages":"Article 110466"},"PeriodicalIF":2.8,"publicationDate":"2025-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143509475","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Longitudinal humoral immunity against SARS-CoV-2 Spike following infection in individuals from Cameroon
IF 2.8 3区 医学
Virology Pub Date : 2025-02-25 DOI: 10.1016/j.virol.2025.110467
Mehdi Benlarbi , Dell-Dylan Kenfack , Katrina Dionne , Maxime Côté-Chenette , Guillaume Beaudoin-Bussières , Étienne Bélanger , Shilei Ding , Oumarou H. Goni , Yannick F. Ngoume , Alexandra Tauzin , Halima Medjahed , Elodie Ghedin , Ralf Duerr , Andrés Finzi , Marcel Tongo
{"title":"Longitudinal humoral immunity against SARS-CoV-2 Spike following infection in individuals from Cameroon","authors":"Mehdi Benlarbi ,&nbsp;Dell-Dylan Kenfack ,&nbsp;Katrina Dionne ,&nbsp;Maxime Côté-Chenette ,&nbsp;Guillaume Beaudoin-Bussières ,&nbsp;Étienne Bélanger ,&nbsp;Shilei Ding ,&nbsp;Oumarou H. Goni ,&nbsp;Yannick F. Ngoume ,&nbsp;Alexandra Tauzin ,&nbsp;Halima Medjahed ,&nbsp;Elodie Ghedin ,&nbsp;Ralf Duerr ,&nbsp;Andrés Finzi ,&nbsp;Marcel Tongo","doi":"10.1016/j.virol.2025.110467","DOIUrl":"10.1016/j.virol.2025.110467","url":null,"abstract":"<div><div>In May 2023 the World Health Organization (WHO) declared the end of COVID-19 as a public health emergency. Seroprevalence studies performed in African countries, such as Cameroon, depicted a much higher COVID-19 burden than reported by the WHO. To better understand humoral responses kinetics following infection, we enrolled 333 participants from Yaoundé, Cameroon between March 2020 and January 2022. We measured the levels of antibodies targeting the SARS-CoV-2 receptor-binding-domain (RBD) and the Spike glycoproteins of Delta, Omicron BA.1 and BA.4/5 and the common cold coronavirus HCoV-OC43. We also evaluated plasma capacity to neutralize authentic SARS-CoV-2 virus and to mediate Antibody-Dependent Cellular Cytotoxicity (ADCC). Most individuals mounted a strong antibody response against SARS-CoV-2 Spike. Plasma neutralization waned faster than anti-Spike binding and ADCC. We observed differences in humoral responses by age and circulating variants. Altogether, we show a global overview of antibody dynamics and functionality against SARS-CoV-2 in Cameroon.</div></div>","PeriodicalId":23666,"journal":{"name":"Virology","volume":"605 ","pages":"Article 110467"},"PeriodicalIF":2.8,"publicationDate":"2025-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143529026","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Multifunctional noncoding regions in the mammarenavirus genome
IF 2.8 3区 医学
Virology Pub Date : 2025-02-24 DOI: 10.1016/j.virol.2025.110464
Masaharu Iwasaki
{"title":"Multifunctional noncoding regions in the mammarenavirus genome","authors":"Masaharu Iwasaki","doi":"10.1016/j.virol.2025.110464","DOIUrl":"10.1016/j.virol.2025.110464","url":null,"abstract":"<div><div>Mammarenaviruses often cause long-term asymptomatic chronic infections in their natural hosts, primarily rodents, and include several human pathogens responsible for diseases ranging from mild febrile illnesses to life-threatening hemorrhagic fever. Mammarenaviruses encode two genes in each segment of their bisegmented RNA genome, with ambisense polarity. The multifunctionality of each gene product supports the optimal propagation of the virus. Moreover, the noncoding regions of the mammarenaviral genome have been shown to have multiple functions, beyond the control of viral transcription and replication. For instance, the noncoding intergenic region (IGR) is integral to the posttranscriptional regulation of viral protein expression. This mechanism underlies the efficient multiplication of the virus, which utilizes an ambisense coding strategy. Further clarification of the multifunctionality of the noncoding regions of the mammarenaviral genome will extend our understanding of the complex biology of these simple viruses and provide the basis for the development of novel medical countermeasures.</div></div>","PeriodicalId":23666,"journal":{"name":"Virology","volume":"605 ","pages":"Article 110464"},"PeriodicalIF":2.8,"publicationDate":"2025-02-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143511329","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Shared and unique mechanisms of RNAi-mediated antiviral immunity in C. elegans
IF 2.8 3区 医学
Virology Pub Date : 2025-02-21 DOI: 10.1016/j.virol.2025.110459
Teng Yan , Rui Lu
{"title":"Shared and unique mechanisms of RNAi-mediated antiviral immunity in C. elegans","authors":"Teng Yan ,&nbsp;Rui Lu","doi":"10.1016/j.virol.2025.110459","DOIUrl":"10.1016/j.virol.2025.110459","url":null,"abstract":"<div><div>Small interfering RNAs (siRNAs), generated by Dicer proteins, play a pivotal role in antiviral immunity in eukaryotes. Dicer proteins also produce microRNAs (miRNAs), a class of endogenous small non-coding RNAs that regulate essential cellular functions through post-transcriptional mechanisms. In plants and insects, multiple Dicer proteins are produced and deployed to separately manage the biogenesis of antiviral siRNAs and miRNAs. This separation ensures that viral infections, especially the production of viral RNAi suppressors, do not severely compromise host growth or development. In contrast, nematode worms, such as <em>Caenorhabditis elegans,</em> rely on a single Dicer protein to produce both types of small RNAs. Probably as a strategy to mitigate the potential disruption of miRNA production by viral infections, nematodes have evolved distinct strategies for generating primary and secondary siRNAs for antiviral defense. This review explores the shared and unique features of siRNA-mediated antiviral immunity in <em>Caenorhabditis elegans</em>, shedding light on the specialized adaptations that enable robust antiviral defenses without compromising miRNA-mediated function.</div></div>","PeriodicalId":23666,"journal":{"name":"Virology","volume":"605 ","pages":"Article 110459"},"PeriodicalIF":2.8,"publicationDate":"2025-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143511330","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Immunity responses as checkpoints for efficient transmission of begomoviruses by whiteflies
IF 2.8 3区 医学
Virology Pub Date : 2025-02-21 DOI: 10.1016/j.virol.2025.110462
Ilana Kuzminsky , Murad Ghanim
{"title":"Immunity responses as checkpoints for efficient transmission of begomoviruses by whiteflies","authors":"Ilana Kuzminsky ,&nbsp;Murad Ghanim","doi":"10.1016/j.virol.2025.110462","DOIUrl":"10.1016/j.virol.2025.110462","url":null,"abstract":"<div><div>Begomoviruses are a group of single stranded DNA plant viruses exclusively transmitted by the sweet potato whitefly <em>Bemisia tabaci</em> in a persistent, circulative manner. After acquisition from plant phloem, this group of viruses circulate and are retained within the whitefly, interacting with tissues, cells and molecular pathways for maintaining the safety of the infective intact virions, by exploiting cellular mechanisms and avoiding degradation by the insect immune responses. During retention, the virions are internalized in the midgut cells, exit and spend hours-days in the hemolymph and cross into salivary gland cells, before transmission. Destroying this group of viruses by the insect immune system seems inefficient for the most part, by examining their very efficient transmission. Thus, within the various sites along the transmission pathway especially in the midgut, it is thought that the immune system with its various layers is activated for avoiding the damage caused by the viruses on one hand, and for ensuring their safe circulation and transmission on the other hand. Begomoviruses have evolved mechanisms for counteracting and exploiting the activated immune system for their safe translocation within the whitefly. In this review, we discuss the various levels of immunity activated against begomoviruses in <em>B. tabaci,</em> taking other pathogen-vector systems as examples and reflecting relevant components on the interactions between <em>B. tabaci</em> and Begomoviruses.</div></div>","PeriodicalId":23666,"journal":{"name":"Virology","volume":"605 ","pages":"Article 110462"},"PeriodicalIF":2.8,"publicationDate":"2025-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143509476","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Viral oncogenesis of δ-retroviruses, HTLV-1 and BLV, and recent advances in its diagnosis
IF 2.8 3区 医学
Virology Pub Date : 2025-02-21 DOI: 10.1016/j.virol.2025.110461
Md Belal Hossain , Benjy Jek Yang Tan , Yorifumi Satou
{"title":"Viral oncogenesis of δ-retroviruses, HTLV-1 and BLV, and recent advances in its diagnosis","authors":"Md Belal Hossain ,&nbsp;Benjy Jek Yang Tan ,&nbsp;Yorifumi Satou","doi":"10.1016/j.virol.2025.110461","DOIUrl":"10.1016/j.virol.2025.110461","url":null,"abstract":"<div><div>The δ-retrovirus genus includes human T-cell leukemia viruses (HTLV-1, HTLV-2, HTLV-3), simian T-lymphotropic viruses (STLV), and bovine leukemia viruses (BLV), which establish lifelong, typically asymptomatic, infections. However, HTLV-1 and BLV can lead to leukemia or lymphoma in 2–5% of infected hosts after prolonged latency. HTLV-1, the first identified human oncogenic retrovirus, drives T-cell leukemia/lymphoma via cell-intrinsic mechanisms. Similarly, BLV induces B-cell lymphoma in cattle, sharing key genomic and disease progression features with HTLV-1. Retrovirus-induced leukemias/lymphomas arise through complex interactions of viral and host factors. This review explores current virological perspectives on δ-retroviral oncogenesis, focusing on proviral integration sites within the host genome. Additionally, we briefly compare HTLV-1 with the human immunodeficiency virus (HIV), highlighting that while HIV causes AIDS, it also induces clonal expansion of infected cells. Finally, we discuss the potential diagnostic and prognostic value of analyzing viral factors and integration sites.</div></div>","PeriodicalId":23666,"journal":{"name":"Virology","volume":"605 ","pages":"Article 110461"},"PeriodicalIF":2.8,"publicationDate":"2025-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143487140","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Altered receptor-binding specificity of gull-adapted H13 avian influenza viruses corresponds to their unique host preferences
IF 2.8 3区 医学
Virology Pub Date : 2025-02-21 DOI: 10.1016/j.virol.2025.110460
Rio Harada , Takahiro Hiono , Manabu Igarashi , Daiki Kobayashi , Hinako Ban , Norikazu Isoda , Yoshihiro Sakoda
{"title":"Altered receptor-binding specificity of gull-adapted H13 avian influenza viruses corresponds to their unique host preferences","authors":"Rio Harada ,&nbsp;Takahiro Hiono ,&nbsp;Manabu Igarashi ,&nbsp;Daiki Kobayashi ,&nbsp;Hinako Ban ,&nbsp;Norikazu Isoda ,&nbsp;Yoshihiro Sakoda","doi":"10.1016/j.virol.2025.110460","DOIUrl":"10.1016/j.virol.2025.110460","url":null,"abstract":"<div><div>Avian influenza viruses (AIVs) recognize α2-3 sialosides as receptors. Previous studies showed that the structural diversity within α2-3 sialosides is related to the host specificity of AIVs. H13 AIVs are primarily isolated from gulls, although almost all AIV subtypes have been isolated from ducks, the natural hosts of AIVs. To elucidate the molecular basis of the host specificity of H13 viruses to gulls, the receptor-binding specificity of H13 hemagglutinins (HAs) and the distribution of viral receptors in gulls were investigated. The results revealed that recombinant HA (rHA) of H13 viruses had a binding preference for fucosylated α2-3 sialosides, which were distributed widely in the respiratory tract and intestines of gulls but not in the colon of ducks. Moreover, the receptor-binding specificity of mutant rHAs revealed that amino acids in the 130-loop and at position 227 of H13 HA were critical for the preference for fucosylated α2-3 sialosides. The results of the present study suggest that the binding specificity of H13 HA to fucosylated α2-3 sialosides is a key factor for the host susceptibility of H13 viruses to gulls.</div></div>","PeriodicalId":23666,"journal":{"name":"Virology","volume":"605 ","pages":"Article 110460"},"PeriodicalIF":2.8,"publicationDate":"2025-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143474925","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Assessing the virological response to direct-acting antiviral therapies in the HBV cure programme
IF 2.8 3区 医学
Virology Pub Date : 2025-02-21 DOI: 10.1016/j.virol.2025.110458
James Lok , James M. Harris , Ivana Carey , Kosh Agarwal , Jane A. McKeating
{"title":"Assessing the virological response to direct-acting antiviral therapies in the HBV cure programme","authors":"James Lok ,&nbsp;James M. Harris ,&nbsp;Ivana Carey ,&nbsp;Kosh Agarwal ,&nbsp;Jane A. McKeating","doi":"10.1016/j.virol.2025.110458","DOIUrl":"10.1016/j.virol.2025.110458","url":null,"abstract":"<div><div>Hepatitis B virus (HBV) is a global health problem with over 250 million people affected worldwide. Nucleos(t)ide analogues remain the standard of care and suppress production of progeny virions; however, they have limited effect on the viral transcriptome and long-term treatment is associated with off-target toxicities. Promising results are emerging from clinical trials and several drug classes have been evaluated, including capsid assembly modulators and RNA interfering agents. Whilst peripheral biomarkers are used to monitor responses and define treatment endpoints, they fail to reflect the full reservoir of infected hepatocytes. Given these limitations, consideration should be given to the merits of sampling liver tissue, especially in the context of clinical trials. In this review article, we will discuss methods for profiling HBV in liver tissue and their value to the HBV cure programme.</div></div>","PeriodicalId":23666,"journal":{"name":"Virology","volume":"605 ","pages":"Article 110458"},"PeriodicalIF":2.8,"publicationDate":"2025-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143519819","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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