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A Water-Repellent Ionic Liquid/MOF Protective Layer for Stable Zinc Anodes.
IF 10.7 2区 材料科学
Small Methods Pub Date : 2025-03-04 DOI: 10.1002/smtd.202402213
Yujing Zhang, Tiantian Zhan, Miao Zhu, Limin Qi
{"title":"A Water-Repellent Ionic Liquid/MOF Protective Layer for Stable Zinc Anodes.","authors":"Yujing Zhang, Tiantian Zhan, Miao Zhu, Limin Qi","doi":"10.1002/smtd.202402213","DOIUrl":"https://doi.org/10.1002/smtd.202402213","url":null,"abstract":"<p><p>Aqueous zinc-ion batteries have emerged as promising candidates for large-scale energy storage, but their cycle stability is limited by irreversible zinc anodes due to dendrite growth and undesired side reactions. Here, an artificial composite protective layer consisting of a Zn metal-organic framework (MOF) layer infiltrated with a hydrophobic ionic liquid 1-ethyl-3-methylimidazoline bis(trifluoromethyl sulfonyl) imide is constructed on zinc anodes. The unique porous structure of the MOF enables uniform electric field distribution, effectively inducing uniform Zn plating and stripping. Meanwhile, a small amount of hydrophobic ionic liquid can effectively isolate the direct contact between the zinc anode and the aqueous electrolyte, thereby inhibiting undesired side reactions including hydrogen evolution reaction. In addition, the cations in the ionic liquid can act as a shielding layer to suppress the tip effect. Consequently, the stability of the zinc metal anode is greatly improved. The assembled symmetric cell is able to cycle stably for over 2600 h at 0.2 mA cm<sup>-2</sup>/0.2 mAh cm<sup>-2</sup> and over 800 h at 1 mA cm<sup>-2</sup>/1 mAh cm<sup>-2</sup>, which also exhibits lower and more stable overpotentials.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2402213"},"PeriodicalIF":10.7,"publicationDate":"2025-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143539609","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synergistic Effect of Solvent and Component Engineering for High-Efficiency Carbon-Based Perovskite Solar Cells.
IF 10.7 2区 材料科学
Small Methods Pub Date : 2025-03-04 DOI: 10.1002/smtd.202402039
Nannan Wang, Jiating Wang, Xinrui Gao, Yingjia Zhuansun, Decai Zhu, Qingbo Wei, Shengzhong Frank Liu
{"title":"Synergistic Effect of Solvent and Component Engineering for High-Efficiency Carbon-Based Perovskite Solar Cells.","authors":"Nannan Wang, Jiating Wang, Xinrui Gao, Yingjia Zhuansun, Decai Zhu, Qingbo Wei, Shengzhong Frank Liu","doi":"10.1002/smtd.202402039","DOIUrl":"https://doi.org/10.1002/smtd.202402039","url":null,"abstract":"<p><p>It is highly desired to get rid of the high-temperature annealing process in manufacturing perovskite solar cells (PSCs) to reduce production costs. Herein, perovskite films are designed by rapidly evaporating of a mixture solvent consisting of methylamine ethanol solution (MA-EtOH sol) and acetonitrile (ACN) (MA-EtOH-ACN) by dopping different amounts of formamidinium iodide (FAI) into the CH<sub>3</sub>NH<sub>2</sub>PbI<sub>3</sub> (MAPbI<sub>3</sub>) precursor solution; as a result, the high-temperature annealing step is effectively eliminated while the perovskite solar cell efficiency remains unchanged. The in situ UV-vis absorption for monitoring the perovskite crystallization process shows that FAI retards the crystallization rate, leading to a dense and smooth film. It is also found that the synergistic effect of solvent and composition engineering reduces defect density, boosts absorption strength, and enhances film stability. Consequently, high-performance ITO/SnO<sub>2</sub>/FA<sub>0.05</sub>MA<sub>0.95</sub>PbI<sub>3</sub>/carbon device is obtained with efficiency as high as 18.74%, with an excellent short circuit current of 25.04 mA cm<sup>-2</sup>, an open circuit voltage of 1.16 V, and a fill factor of 64.53%. The carbon-based perovskite solar cells also exhibit outstanding stability. This strategy offers a reference to producing efficient and stable perovskite cells by the straightforward ink method.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2402039"},"PeriodicalIF":10.7,"publicationDate":"2025-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143555498","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Persistent- and Mechanoluminescence of Er3+-Doped NaYF4 for Multipurpose Use.
IF 10.7 2区 材料科学
Small Methods Pub Date : 2025-03-04 DOI: 10.1002/smtd.202401615
Leipeng Li, Huimin Li, Yifan Liu, Chongyang Cai, Pei Li, Dengfeng Peng, Yanmin Yang
{"title":"Persistent- and Mechanoluminescence of Er<sup>3+</sup>-Doped NaYF<sub>4</sub> for Multipurpose Use.","authors":"Leipeng Li, Huimin Li, Yifan Liu, Chongyang Cai, Pei Li, Dengfeng Peng, Yanmin Yang","doi":"10.1002/smtd.202401615","DOIUrl":"https://doi.org/10.1002/smtd.202401615","url":null,"abstract":"<p><p>Advanced functional materials that possess both persistent luminescence (PersL) and mechanoluminescence (ML) have gained considerable attention during the past few years owing to their potential applications in many fields such as two-dimensional stress sensing, energy-saving lighting, and optical bioimaging. However, combined investigation of PersL and ML is still in its infancy. Here, the optical property of Er<sup>3+</sup>-doped NaYF<sub>4</sub>, mainly focusing on the PersL and ML characteristic and their correlation, is studied in detail. It is shown that microscaled NaYF<sub>4</sub>:Er<sup>3+</sup> has advantages against nanoscaled counterpart in terms of PersL and ML, consistent with the photoluminescence results. By means of pre-charging and trap-emptying cycle and thermoluminescence test, it is confirmed that the PersL and ML of NaYF<sub>4</sub>:Er<sup>3+</sup> come from the same trapped charge carriers, and the ML belongs to the trap-controlled ML. Furthermore, the good repeatability is proven, and regulation of the PersL and ML of NaYF<sub>4</sub>:Er<sup>3+</sup> is realized. Finally, the potential of NaYF<sub>4</sub>:Er<sup>3+</sup> for dynamic anti-counterfeiting and dual-mode detection of X-ray radiation dose is demonstrated.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2401615"},"PeriodicalIF":10.7,"publicationDate":"2025-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143539735","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Co-Doped Hybrid Magneto-Mechano-Electric Generator for Powering Watt-Level IoT Systems.
IF 10.7 2区 材料科学
Small Methods Pub Date : 2025-03-04 DOI: 10.1002/smtd.202401666
Ha Young Lee, Srinivas Pattipaka, Sung-Dae Kim, Geon-Tae Hwang, Jongmoon Jang
{"title":"Co-Doped Hybrid Magneto-Mechano-Electric Generator for Powering Watt-Level IoT Systems.","authors":"Ha Young Lee, Srinivas Pattipaka, Sung-Dae Kim, Geon-Tae Hwang, Jongmoon Jang","doi":"10.1002/smtd.202401666","DOIUrl":"https://doi.org/10.1002/smtd.202401666","url":null,"abstract":"<p><p>Magneto-mechano-electric (MME) generators, which convert ambient magnetic energy into electricity, show promise as power sources for wireless Internet of Things (IoT) sensors. However, their output power remains insufficient for powering watt-level IoT applications. This study addresses this limitation by co-doping Pb(Mg<sub>1/3</sub>Nb<sub>2/3</sub>)O<sub>3</sub>-Pb(Zr,Ti)O<sub>3</sub> (PMN-PZT) piezoelectric single crystals with manganese (Mn) and lanthanum (La). The piezoelectric cantilevers are constructed using an optimized composition containing 1 mol.% Mn and 0.5 mol.% La, designed to operate d<sub>32</sub>-mode at a resonance frequency of 60 Hz. The piezoelectric cantilever is combined with an electromagnetic coil to complete the hybrid-MME (H-MME) generator, achieving a total root mean square power of 82.19 mW under a 5-Oe magnetic field. The H-MME generator successfully supplied the watt-level power-consuming smart farm system, which included a power management circuit, camera, microcontroller, and Bluetooth module, to transmit images to a smartphone at intervals of 1 h 30 min. These results demonstrate the potential of co-doped H-MME generators to drive watt-level IoT systems, enabling applications with high-energy demands.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2401666"},"PeriodicalIF":10.7,"publicationDate":"2025-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143555496","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Recent Advances in the Construction and Application of Anion-Induced Cucurbit[n]uril-Based Supramolecular Assemblies via Outer-Surface Interactions.
IF 10.7 2区 材料科学
Small Methods Pub Date : 2025-03-03 DOI: 10.1002/smtd.202402186
Feiyang Tian, Ruixue Cheng, Kai Chen, Jiang-Lin Zhao
{"title":"Recent Advances in the Construction and Application of Anion-Induced Cucurbit[n]uril-Based Supramolecular Assemblies via Outer-Surface Interactions.","authors":"Feiyang Tian, Ruixue Cheng, Kai Chen, Jiang-Lin Zhao","doi":"10.1002/smtd.202402186","DOIUrl":"https://doi.org/10.1002/smtd.202402186","url":null,"abstract":"<p><p>Cucurbit[n]urils (abbreviated as Q[n]s or CB[n]s) are synthesized through the condensation of formaldehyde and glycoluril in a hydrochloric acid environment. These molecules exhibit three distinctive properties concerning their charge distribution: a neutral internal cavity, a positively charged outer surface, and a negatively charged portal carbonyl oxygen atoms. These unique characteristics facilitate the formation of supramolecular frameworks with a range of anions and metal polyanions. The primary focus of this review is on the creation of anion-induced Q[n]-based supramolecular self-assemblies and exploring their potential applications in metal ion sequestration and release, gas adsorption, as well as the development of fluorescence probes. Additionally, a concise review of current research on anion-induced Q[n]-based supramolecular compounds is provided, aiming to stimulate future advancements in the field of innovative supramolecular framework materials.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2402186"},"PeriodicalIF":10.7,"publicationDate":"2025-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143536211","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Liquid Printing in Nanochitin Suspensions: Interfacial Nanoparticle Assembly Toward Volumetric Elements, Organic Electronics and Core-Shell Filaments.
IF 10.7 2区 材料科学
Small Methods Pub Date : 2025-03-03 DOI: 10.1002/smtd.202500100
Mahyar Panahi-Sarmad, Ahmadreza Ghaffarkhah, Lukas Alexander Bauman, Amin Babaei-Ghazvini, Seyyed Alireza Hashemi, Bishnu Acharya, Boxin Zhao, Mohammad Arjmand, Feng Jiang, Orlando J Rojas
{"title":"Liquid Printing in Nanochitin Suspensions: Interfacial Nanoparticle Assembly Toward Volumetric Elements, Organic Electronics and Core-Shell Filaments.","authors":"Mahyar Panahi-Sarmad, Ahmadreza Ghaffarkhah, Lukas Alexander Bauman, Amin Babaei-Ghazvini, Seyyed Alireza Hashemi, Bishnu Acharya, Boxin Zhao, Mohammad Arjmand, Feng Jiang, Orlando J Rojas","doi":"10.1002/smtd.202500100","DOIUrl":"https://doi.org/10.1002/smtd.202500100","url":null,"abstract":"<p><p>A nanoparticle-nanoparticle assembly is introduced using electrostatic complexation to precisely control volumetric structuring at the water/alcohol interface. In this system, an aqueous graphene oxide (GO) ink interacts electrostatically with partially deacetylated chitin nanofibers (mChNF), modified with benzophenone and dispersed in 1-butanol, which serves as the external phase. Upon extrusion of the GO ink, a jammed interfacial network forms, stabilizing the printed patterns within the external suspension, which provides suitable viscoelasticity for support-free printing. This approach is further extended to inks incorporating metal-organic frameworks or cellulose nanoparticles, demonstrating the advantages of mChNF as a stabilizer. Additionally, by incorporating a conductive polymer, the inks can be tailored for programmable and conductive patterning, opening new opportunities in liquid electronics and reconfigurable systems. Finally, GO inks containing an anionic polyelectrolyte (sodium alginate) undergo osmosis-driven solidification, facilitating the demolding of high-fidelity 3D structures formed by the printed threads of struts. These structures exhibit coreshell morphologies and high mechanical strength (∼175 MPa at 4% strain). Overall, this liquid-in-liquid fabrication approach, enabled by the integration of mChNF in the external phase, unlocks new possibilities for the design of versatile and multifunctional materials.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2500100"},"PeriodicalIF":10.7,"publicationDate":"2025-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143536192","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Recent Advances in Structured Illumination Microscopy: From Fundamental Principles to AI-Enhanced Imaging.
IF 10.7 2区 材料科学
Small Methods Pub Date : 2025-03-03 DOI: 10.1002/smtd.202401616
Heng Zhang, Yunqi Zhu, Luhong Jin, Haixu Yang, Jianhang Wang, Sergey Ablameyko, Xu Liu, Yingke Xu
{"title":"Recent Advances in Structured Illumination Microscopy: From Fundamental Principles to AI-Enhanced Imaging.","authors":"Heng Zhang, Yunqi Zhu, Luhong Jin, Haixu Yang, Jianhang Wang, Sergey Ablameyko, Xu Liu, Yingke Xu","doi":"10.1002/smtd.202401616","DOIUrl":"https://doi.org/10.1002/smtd.202401616","url":null,"abstract":"<p><p>Structured illumination microscopy (SIM) has emerged as a pivotal super-resolution technique in biological imaging. This review aims to introduce the fundamental principles of SIM, primarily focuses on the latest developments in super-resolution SIM imaging, such as the light illumination and modulation devices, and the image reconstruction algorithms. Additionally, the application of deep learning (DL) technology in SIM imaging is explored, which is employed to enhance image quality, accelerate imaging and reconstruction speed or replace the current image reconstruction method. Furthermore, the key evaluation metrics are proposed and discussed for assessment of deep-learning neural networks, especially for their employment in SIM. Finally, the future integration of artificial intelligence (AI) with SIM system and the perspective of smart microscope are also discussed.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2401616"},"PeriodicalIF":10.7,"publicationDate":"2025-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143536206","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
GalNAc End-Capped Poly(β-amino ester)s with Screened Side Chains for Efficient Gene Delivery.
IF 10.7 2区 材料科学
Small Methods Pub Date : 2025-03-03 DOI: 10.1002/smtd.202401286
Xinlong Liu, Yimeng Li, Xinhua Liu, Yangyang Huang, Fujun Wang, Jiafeng Li, Yuqi Guo, Xinyuan Zhu, Lijuan Zhu, Chuan Zhang
{"title":"GalNAc End-Capped Poly(β-amino ester)s with Screened Side Chains for Efficient Gene Delivery.","authors":"Xinlong Liu, Yimeng Li, Xinhua Liu, Yangyang Huang, Fujun Wang, Jiafeng Li, Yuqi Guo, Xinyuan Zhu, Lijuan Zhu, Chuan Zhang","doi":"10.1002/smtd.202401286","DOIUrl":"https://doi.org/10.1002/smtd.202401286","url":null,"abstract":"<p><p>Plasmids are widely used gene vectors in gene therapy, yet their efficient delivery remains a major challenge for achieving optimal therapeutic outcomes. Recently, poly(β-amino esters) (PBAEs) have emerged as promising carriers for non-viral gene delivery due to their tunable structures and high delivery efficiency. Nonetheless, the cationic nature of PBAEs raises toxicity concerns, and their lack of tissue-specific targeting capability limits their clinical application. Herein, a novel PBAE for efficient plasmid delivery is constructed, which contains disulfide bonds in the backbone and N-acetylgalactosamine (GalNAc) moieties at the terminals (GalNAc-PBAEs). To address the potential reduction in nucleic acid condensing capacity caused by end-capping PBAE with GalNAc, the commonly used end-capping amines in conventional PBAE are employed as monomers to create GalNAc-PBAEs with tertiary amine side chains. Through side-chain screening, the optimized GalNAc-PBAE exhibits enhanced transfection efficiency, surpassing that of the conventional top-performing PBAE, C28-E7, and rivaling the commercial transfection reagent Lipo2000. Importantly, the GalNAc moieties enable the plasmid-PBAE polyplex to efficiently target the liver. In a mouse model with acute liver fibrosis, the efficient delivery and expression of a representative plasmid encoding HGF significantly mitigate liver fibrosis and improve liver function, demonstrating the potential of the designed PBAE in gene therapy.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2401286"},"PeriodicalIF":10.7,"publicationDate":"2025-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143536188","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthetic Biology-Based Strategy for Nanomedicine Design.
IF 10.7 2区 材料科学
Small Methods Pub Date : 2025-03-03 DOI: 10.1002/smtd.202401969
Xiangyun Zhang, Qiannan Duan, Jie Zhuang, Xinglu Huang
{"title":"Synthetic Biology-Based Strategy for Nanomedicine Design.","authors":"Xiangyun Zhang, Qiannan Duan, Jie Zhuang, Xinglu Huang","doi":"10.1002/smtd.202401969","DOIUrl":"https://doi.org/10.1002/smtd.202401969","url":null,"abstract":"<p><p>Nanomedicines have demonstrated significant potential in disease diagnosis and therapy, revolutionizing traditional drug development patterns. Recently, inspired by both natural and engineering principles, synthetic biology integrates the complexity of biological systems with the precision of engineering to design and create novel biological components, devices, and systems. This convergence of synthetic biology and nanomedicine has led to the emergence of a new concept: synthetic biological nanomedicine. Unlike traditional or biomimetic nanomedicines, synthetic biological nanomedicines are designed using gene engineering-based strategies. In this Perspective, the foundational concepts of synthetic biological nanomedicine are introduced and its relationship to, and differences from, traditional and biomimetic nanomedicine are explored. Drawing from synthetic biology, synthetic biological nanomedicine also incorporates two main approaches: top-down and bottom-up strategies. The latest advancements in the application of synthetic biology to nanomedicine are reviewed, these developments are categorized according to the aforementioned strategies, and a discussion of the potential advantages and challenges associated with utilizing synthetic biology in nanomedicine development is concluded.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2401969"},"PeriodicalIF":10.7,"publicationDate":"2025-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143536215","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Custom-Primed Rolling Circle Amplicons for Highly Accurate Nanopore Sequencing.
IF 10.7 2区 材料科学
Small Methods Pub Date : 2025-03-03 DOI: 10.1002/smtd.202401416
Jiayi Zhang, Xujuan Yang, Weijia Xuan, Zhiguang Wu, Jiawei Ding, Zhenqi Wang, Qi Yan, Tianqing Zhang, Zhi Qi, Jingwei Bai, Bryan Wei
{"title":"Custom-Primed Rolling Circle Amplicons for Highly Accurate Nanopore Sequencing.","authors":"Jiayi Zhang, Xujuan Yang, Weijia Xuan, Zhiguang Wu, Jiawei Ding, Zhenqi Wang, Qi Yan, Tianqing Zhang, Zhi Qi, Jingwei Bai, Bryan Wei","doi":"10.1002/smtd.202401416","DOIUrl":"https://doi.org/10.1002/smtd.202401416","url":null,"abstract":"<p><p>Tandem repeats of a certain DNA sequence can be generated using rolling circle amplification (RCA), where a circular template is continuously amplified by a polymerase with strand displacement activity. In leveraging the linear repetition of the target sequence, enhanced accuracy is achievable by consensus calling in nanopore sequencing. However, traditional multiply-primed RCA produces branched products with limited length, which may not be optimal for nanopore sequencing. In this study, an enhanced RCA protocol is introduced using sequence-specific primers to produce longer and less branched amplicons. Taking advantage of the RCA amplicons of tandem repeats, custom-primed rolling circle amplification sequencing (CPRSeq) is developed, a highly accurate nanopore sequencing pipeline. Utilizing CPRSeq, this successfully sequence standard samples of tumor-associated single nucleotide variants at low mutation frequency and accomplished the whole-genome sequencing and assembly of E. coli.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2401416"},"PeriodicalIF":10.7,"publicationDate":"2025-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143536185","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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