Small MethodsPub Date : 2025-05-26DOI: 10.1002/smtd.202500622
Aristide Djoulde, Anup Sharma, Alfred Bekoe Appiagyei, Levi Tegg, Yang Liu, Lian Zhang, Julie M Cairney, Yunlong Tang, Jing Fu
{"title":"On-Tip Polymerization Method for Multimodal Characterization of Nanoparticles with Electron/Ion Imaging and Atom Probe Tomography.","authors":"Aristide Djoulde, Anup Sharma, Alfred Bekoe Appiagyei, Levi Tegg, Yang Liu, Lian Zhang, Julie M Cairney, Yunlong Tang, Jing Fu","doi":"10.1002/smtd.202500622","DOIUrl":"https://doi.org/10.1002/smtd.202500622","url":null,"abstract":"<p><p>This work presents a novel method for exploring the structures and chemistry of nanoparticles (NPs), addressing challenges in multimodal and correlative microscopy analysis. The proposed method utilizes a \"needle-eye\" design, featuring a through-microchannel fabricated at the needle tip. The microchannel and its surface are tuned via focused ion beam (FIB) milling and plasma treatment, enabling NPs dispersed in a resin precursor to be confined in the microchannel due to a pressure gradient upon immersion. The retained suspension is promptly polymerized in situ on the tip and shaped by FIB milling into specific geometries, including but not limited to a micropillar, lamella, and nanoneedle. Here, to demonstrate its applicability, a mixed metal oxide catalyst prepared by the needle-eye approach is characterized with energy-dispersive X-ray spectroscopy (EDX), FIB secondary ion mass spectrometry (FIB-SIMS), (scanning) transmission electron microscopy ((S)TEM), and atom probe tomography (APT). The results validate the ability of the method to achieve multimodal, combining correlative and complementary high-resolution structural and chemical imaging of individuals and clustered NPs. The proposed method confines picoliter-scale samples (6-60 pL) at a tip, eliminating lift-out and microtomy while enabling comprehensive analysis via combined microscopy techniques.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2500622"},"PeriodicalIF":10.7,"publicationDate":"2025-05-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144140960","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Small MethodsPub Date : 2025-05-24DOI: 10.1002/smtd.202570034
Li Song, Liqun Wang, Zitian He, Xiao Cui, Cheng Peng, Jie Xu, Zhouying Yong, Yanmei Liu, Ji-Feng Fei
{"title":"Improving Spatial Transcriptomics with Membrane-Based Boundary Definition and Enhanced Single-Cell Resolution (Small Methods 5/2025)","authors":"Li Song, Liqun Wang, Zitian He, Xiao Cui, Cheng Peng, Jie Xu, Zhouying Yong, Yanmei Liu, Ji-Feng Fei","doi":"10.1002/smtd.202570034","DOIUrl":"https://doi.org/10.1002/smtd.202570034","url":null,"abstract":"<p><b>Single-Cell Resolution</b></p><p>In article number 2401056, Yanmei Liu, Ji-Feng Fei, and co-workers introduce a cell membrane genetic-labeling model to precisely define cell boundaries in sequencing-based spatial transcriptomics. This work demonstrates that cell segmentation based on cell membranes more accurately represents the true single cells in actual tissues and organs compared to nucleus or algorithmic-based methods, particularly in the case of irregular and multinucleated cells, thereby improving single-cell resolution and enhancing the analytical power of spatial transcriptomics.\u0000\u0000 <figure>\u0000 <div><picture>\u0000 <source></source></picture><p></p>\u0000 </div>\u0000 </figure></p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":"9 5","pages":""},"PeriodicalIF":10.7,"publicationDate":"2025-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/smtd.202570034","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144131558","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Small MethodsPub Date : 2025-05-24DOI: 10.1002/smtd.202570033
Qianwen Wang, Hongyuan Zhu, Lin Deng, Shuangbin Xu, Wenqin Xie, Ming Li, Rui Wang, Liang Tie, Li Zhan, Guangchuang Yu
{"title":"Spatial Transcriptomics: Biotechnologies, Computational Tools, and Neuroscience Applications (Small Methods 5/2025)","authors":"Qianwen Wang, Hongyuan Zhu, Lin Deng, Shuangbin Xu, Wenqin Xie, Ming Li, Rui Wang, Liang Tie, Li Zhan, Guangchuang Yu","doi":"10.1002/smtd.202570033","DOIUrl":"https://doi.org/10.1002/smtd.202570033","url":null,"abstract":"<p><b>Computational Tools</b></p><p>The image features spatial transcriptomics, displaying a brain section against a digital backdrop. This technology precisely maps gene expression in brain tissue, driving advances across multiple fields, from cell atlas to disease diagnostics, revolutionizing brain molecular research. More in article number 2401107 by Guangchuang Yu and co-workers.\u0000\u0000 <figure>\u0000 <div><picture>\u0000 <source></source></picture><p></p>\u0000 </div>\u0000 </figure></p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":"9 5","pages":""},"PeriodicalIF":10.7,"publicationDate":"2025-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/smtd.202570033","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144131547","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Small MethodsPub Date : 2025-05-24DOI: 10.1002/smtd.202570035
Chen-Kai Guo, Chen-Rui Xia, Guangdun Peng, Zhi-Jie Cao, Ge Gao
{"title":"Learning Phenotype Associated Signature in Spatial Transcriptomics with PASSAGE (Small Methods 5/2025)","authors":"Chen-Kai Guo, Chen-Rui Xia, Guangdun Peng, Zhi-Jie Cao, Ge Gao","doi":"10.1002/smtd.202570035","DOIUrl":"https://doi.org/10.1002/smtd.202570035","url":null,"abstract":"<p><b>Spatial Signature Identification</b></p><p>The cover image depicts a novel deep learning framework, PASSAGE, designed to automatically identify phenotype-associated spatial signatures across large-scale heterogeneous spatial transcriptomics cohorts, schematically represented by intertwining passages connecting different puzzle pieces (spatial transcriptomics record the ground-truth spatial location of cells, a process akin to reconstructing a scattered puzzle into its original landscape). More in article number 2401451 by Guangdun Peng, Zhi-Jie Cao, and Ge Gao and co-workers.\u0000\u0000 <figure>\u0000 <div><picture>\u0000 <source></source></picture><p></p>\u0000 </div>\u0000 </figure></p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":"9 5","pages":""},"PeriodicalIF":10.7,"publicationDate":"2025-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/smtd.202570035","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144131560","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A Robust Kernel-Based Workflow for Niche Trajectory Analysis\t(Small Methods 5/2025)","authors":"Wen Wang, 王文, Sujung Crystal Shin, Joselyn Cristina Chávez-Fuentes, Guo-Cheng Yuan","doi":"10.1002/smtd.202570031","DOIUrl":"https://doi.org/10.1002/smtd.202570031","url":null,"abstract":"<p><b>Niche Trajectory Analyses</b></p><p>In article number 2401199, Guo-Cheng Yuan and co-workers develop a kernel-based machine learning method for niche trajectory analysis. This method enables biologists to dissect the spatially continuous variations of tissue microenvironment from spatial omics data. This method is technology agnostic and does not require cell type annotation information.\u0000\u0000 <figure>\u0000 <div><picture>\u0000 <source></source></picture><p></p>\u0000 </div>\u0000 </figure></p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":"9 5","pages":""},"PeriodicalIF":10.7,"publicationDate":"2025-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/smtd.202570031","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144131559","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Dual-Functional Thermal Metamaterials: Decoupling Heat Flux and Temperature Fields for Advanced Thermal Management.","authors":"Yixin Liu, Xianrong Cao, Jiachang Li, Yinuo Zhou, Zifeng Tong, Zihao Zhang, Ziang Zhang, Dongsheng Jiao, Zhengdong Cheng, Liqun He","doi":"10.1002/smtd.202500469","DOIUrl":"https://doi.org/10.1002/smtd.202500469","url":null,"abstract":"<p><p>Thermal metamaterials offer a powerful platform for precise thermal management, with exceptional potential in applications such as thermal camouflage, protection, and energy utilization. However, the inherent coupling of heat flux and temperature fields, governed by Fourier's law, limits existing thermal metamaterials to single functionality. For instance, in a classic thermal cloak, both heat flux and temperature gradients are absent within the cloaked region, repelling both fields similarly. Here, a design theory is proposed for dual-functional metamaterials that decouples the functions of heat flux and temperature fields through coordinate transformations along field lines, enabling their independent control. As proof of concept, six dual-functional meta-devices are developed, where the heat flux and temperature fields independently exhibit functions such as cloak, concentrator, and rotation. Furthermore, the Finite Element Method (FEM) is extended, enabling the programmable design of dual-functional thermal metamaterials. The work not only provides a universal design framework for independent functionality in coupled physical fields, but also offers potential applications extending to fields such as electronics, acoustics, and mechanics.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2500469"},"PeriodicalIF":10.7,"publicationDate":"2025-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144136073","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A Coordination Supramolecular Network Janus Separator Boost Sulfur Redox Dynamics in Lithium-Sulfur Batteries.","authors":"Zhao Chen, Yuanming Tan, Kaiji Lin, Shimei Lai, Chunshan Zhou, Shilin Huang, Yangyi Yang","doi":"10.1002/smtd.202500562","DOIUrl":"https://doi.org/10.1002/smtd.202500562","url":null,"abstract":"<p><p>Lithium-sulfur (Li-S) batteries are limited in practical application due to the dissolution and shuttle effect of lithium polysulfides (LiPSs) intermediates. Herein, a multifunctional Janus separator is designed that integrates the zirconium-based coordination supramolecular network (Zr-CSN) with the polypropylene (PP) membrane to fabricate Zr-CSN@PP. The Zr-CSN@PP constructs a barrier on the side of the sulfur cathode to block the passage of polysulfides, and the nanoporous structure of Zr-CSN transfers lithium ions quickly. The active zirconium sites and abundant oxygen-containing groups of Zr-CSN adsorb and catalyze the polysulfides effectively, which has been proved by experiments and theoretical calculations. Zr-CSN@PP promotes the migration of Li<sup>+</sup> (the lithium-ion transference number is 0.63) and improves the kinetics of sulfur evolution reactions, enhancing the electrochemical performance of Li-S batteries. The Li-S battery with Zr-CSN@PP separator has a capacity of 650.63 mAh g<sup>-1</sup> after 280 cycles at 0.5 C (average decay of 0.2% per cycle), and a capacity of 422.48 mAh g<sup>-1</sup> after 400 cycles at 2 C. This concept of porous coordination supramolecular networks Janus separator provides a broad prospect for advanced Li-S batteries.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2500562"},"PeriodicalIF":10.7,"publicationDate":"2025-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144136126","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Small MethodsPub Date : 2025-05-24DOI: 10.1002/smtd.202570036
Niklas Müller-Bötticher, Sebastian Tiesmeyer, Roland Eils, Naveed Ishaque
{"title":"Sainsc: A Computational Tool for Segmentation-Free Analysis of In Situ Capture Data (Small Methods 5/2025)","authors":"Niklas Müller-Bötticher, Sebastian Tiesmeyer, Roland Eils, Naveed Ishaque","doi":"10.1002/smtd.202570036","DOIUrl":"https://doi.org/10.1002/smtd.202570036","url":null,"abstract":"<p><b>Segmentation-Free Analyses</b></p><p>Sainsc: a new tool for efficient whole organism spatial transcriptomics data analysis at the nanometre scale. Shown is a blended composite spatial map of total gene expression (top), cell types (middle) and assignment confidence (bottom) of a mouse embryo Stereo-seq dataset from Chen et al. 2022. More in article number 2401123 by Naveed Ishaque and co-workers.\u0000\u0000 <figure>\u0000 <div><picture>\u0000 <source></source></picture><p></p>\u0000 </div>\u0000 </figure></p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":"9 5","pages":""},"PeriodicalIF":10.7,"publicationDate":"2025-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/smtd.202570036","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144131561","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Structural Phase Transition-Associated Ferroelectricity and Piezoelectric Energy Harvesting in 0D Halogenozincate Hybrid via Cation's Terminal Group Lengthening.","authors":"Cai-Hong Shi, Si-Yu Deng, Jun-Yi Li, Hao-Ran Chen, Qing-Ling Cao, Wen-He Zhong, Jie-Yu Zhu, Shuai Shao, Wei Bao, Hao Du, Li-Zhuang Chen, Chao Shi, Jia-Jia Zhao","doi":"10.1002/smtd.202500118","DOIUrl":"https://doi.org/10.1002/smtd.202500118","url":null,"abstract":"<p><p>Halogenometallate hybrids have garnered significant research interest for their unique structural properties, making them promising candidates for practical applications. However, due to preparation challenges and stability issues, molecular-based materials with ferroelectric properties are needed. Herein, zero-dimensional (0D) A<sub>2</sub>BX<sub>4</sub>-type halogenozincate hybrids, (C<sub>7</sub>H<sub>13</sub>NR)<sub>2</sub>ZnCl<sub>4</sub> (R = H for 1; methyl for 2; ethyl for 3, n-propyl for 4, and n-butyl for 5), are synthesized. Despite the sole difference in the cation, only 5 displays a reversible ferroelectric phase transition (P4<sub>1</sub>↔P4<sub>3</sub>2<sub>1</sub>2). The ferroelectricity and its implementation in piezoelectric energy harvesting are demonstrated. Single-crystal structural analyses reveal the static-to-dynamic state change of the cation's terminal group drives the phase transition and associated properties. 5 achieves excellent ferroelectricity, including above room-temperature Curie temperature (330 K) and low coercive field (0.95 kV cm<sup>-1</sup>). Furthermore, flexible piezoelectric nanogenerators are fabricated using polyvinyl alcohol films incorporated with 5 at varying weight percentages (wt%). The 15 wt% composite device exhibits the highest open-circuit peak voltage of 74 V, a short-circuit peak current of 4 µA, and a power density of 0.40 mW cm<sup>-2</sup>. More importantly, it maintains stable performance over 5000 cycles. This finding provides a simple approach for designing low-dimensional hybrid ferroelectrics tailored for high-power output devices.</p>","PeriodicalId":229,"journal":{"name":"Small Methods","volume":" ","pages":"e2500118"},"PeriodicalIF":10.7,"publicationDate":"2025-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144136079","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}