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Responding to extreme climates
IF 88.1 1区 生物学
Nature Reviews Microbiology Pub Date : 2024-12-19 DOI: 10.1038/s41579-024-01146-7
Ashley York
{"title":"Responding to extreme climates","authors":"Ashley York","doi":"10.1038/s41579-024-01146-7","DOIUrl":"https://doi.org/10.1038/s41579-024-01146-7","url":null,"abstract":"A recent study found that soil microbial communities show consistent and predictable responses to extreme climatic events.","PeriodicalId":18838,"journal":{"name":"Nature Reviews Microbiology","volume":"28 1","pages":""},"PeriodicalIF":88.1,"publicationDate":"2024-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142849146","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Commensals find their niche 寄生虫找到了自己的位置
IF 88.1 1区 生物学
Nature Reviews Microbiology Pub Date : 2024-12-16 DOI: 10.1038/s41579-024-01142-x
Andrea Du Toit
{"title":"Commensals find their niche","authors":"Andrea Du Toit","doi":"10.1038/s41579-024-01142-x","DOIUrl":"https://doi.org/10.1038/s41579-024-01142-x","url":null,"abstract":"A recent study shows that the commensal bacterium Lactiplantibacillus plantarum recognizes the foregut of the fruit fly as its physical niche via sugar-binding adhesins.","PeriodicalId":18838,"journal":{"name":"Nature Reviews Microbiology","volume":"30 1","pages":""},"PeriodicalIF":88.1,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142825712","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Author Correction: Examining the healthy human microbiome concept 作者更正：审视健康人体微生物组概念
IF 88.1 1区 生物学
Nature Reviews Microbiology Pub Date : 2024-12-16 DOI: 10.1038/s41579-024-01145-8
Raphaela Joos, Katy Boucher, Aonghus Lavelle, Manimozhiyan Arumugam, Martin J. Blaser, Marcus J. Claesson, Gerard Clarke, Paul D. Cotter, Luisa De Sordi, Maria G. Dominguez-Bello, Bas E. Dutilh, Stanislav D. Ehrlich, Tarini Shankar Ghosh, Colin Hill, Christophe Junot, Leo Lahti, Trevor D. Lawley, Tine R. Licht, Emmanuelle Maguin, Thulani P. Makhalanyane, Julian R. Marchesi, Jelle Matthijnssens, Jeroen Raes, Jacques Ravel, Anne Salonen, Pauline D. Scanlan, Andrey Shkoporov, Catherine Stanton, Ines Thiele, Igor Tolstoy, Jens Walter, Bo Yang, Natalia Yutin, Alexandra Zhernakova, Hub Zwart, Joël Doré, R. Paul Ross
{"title":"Author Correction: Examining the healthy human microbiome concept","authors":"Raphaela Joos, Katy Boucher, Aonghus Lavelle, Manimozhiyan Arumugam, Martin J. Blaser, Marcus J. Claesson, Gerard Clarke, Paul D. Cotter, Luisa De Sordi, Maria G. Dominguez-Bello, Bas E. Dutilh, Stanislav D. Ehrlich, Tarini Shankar Ghosh, Colin Hill, Christophe Junot, Leo Lahti, Trevor D. Lawley, Tine R. Licht, Emmanuelle Maguin, Thulani P. Makhalanyane, Julian R. Marchesi, Jelle Matthijnssens, Jeroen Raes, Jacques Ravel, Anne Salonen, Pauline D. Scanlan, Andrey Shkoporov, Catherine Stanton, Ines Thiele, Igor Tolstoy, Jens Walter, Bo Yang, Natalia Yutin, Alexandra Zhernakova, Hub Zwart, Joël Doré, R. Paul Ross","doi":"10.1038/s41579-024-01145-8","DOIUrl":"https://doi.org/10.1038/s41579-024-01145-8","url":null,"abstract":"<p>Correction to: <i>Nature Reviews Microbiology</i> https://doi.org/10.1038/s41579-024-01107-0, published online 23 October 2024</p>","PeriodicalId":18838,"journal":{"name":"Nature Reviews Microbiology","volume":"30 1","pages":""},"PeriodicalIF":88.1,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142832155","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Linking innate immune evasion to pandemic potential
IF 88.1 1区 生物学
Nature Reviews Microbiology Pub Date : 2024-12-11 DOI: 10.1038/s41579-024-01137-8
Lucy G. Thorne
{"title":"Linking innate immune evasion to pandemic potential","authors":"Lucy G. Thorne","doi":"10.1038/s41579-024-01137-8","DOIUrl":"https://doi.org/10.1038/s41579-024-01137-8","url":null,"abstract":"In this journal club, Lucy Thorne discusses a paper that compares pandemic and non-pandemic HIV and shows that the ability of pandemic HIV to effectively evade the host’s innate immune response is a key factor in its pandemic potential.","PeriodicalId":18838,"journal":{"name":"Nature Reviews Microbiology","volume":"233 1","pages":""},"PeriodicalIF":88.1,"publicationDate":"2024-12-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142804594","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Gut phages fuel food addiction
IF 88.1 1区 生物学
Nature Reviews Microbiology Pub Date : 2024-12-11 DOI: 10.1038/s41579-024-01140-z
Agustina Taglialegna
{"title":"Gut phages fuel food addiction","authors":"Agustina Taglialegna","doi":"10.1038/s41579-024-01140-z","DOIUrl":"https://doi.org/10.1038/s41579-024-01140-z","url":null,"abstract":"In this study, Castells-Nobau et al. show that bacteriophages present in the gut microbiome contribute to the regulation of food addiction.","PeriodicalId":18838,"journal":{"name":"Nature Reviews Microbiology","volume":"37 1","pages":""},"PeriodicalIF":88.1,"publicationDate":"2024-12-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142804858","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Campylobacter spreads colorectal cancer
IF 88.1 1区 生物学
Nature Reviews Microbiology Pub Date : 2024-12-09 DOI: 10.1038/s41579-024-01139-6
Andrea Du Toit
{"title":"Campylobacter spreads colorectal cancer","authors":"Andrea Du Toit","doi":"10.1038/s41579-024-01139-6","DOIUrl":"https://doi.org/10.1038/s41579-024-01139-6","url":null,"abstract":"This study shows that the Campylobacter jejuni-derived genotoxin named cytolethal distending toxin promotes colorectal cancer metastasis.","PeriodicalId":18838,"journal":{"name":"Nature Reviews Microbiology","volume":"28 1","pages":""},"PeriodicalIF":88.1,"publicationDate":"2024-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142793547","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metagenomics for drug discovery
IF 88.1 1区 生物学
Nature Reviews Microbiology Pub Date : 2024-12-05 DOI: 10.1038/s41579-024-01138-7
Agustina Taglialegna
{"title":"Metagenomics for drug discovery","authors":"Agustina Taglialegna","doi":"10.1038/s41579-024-01138-7","DOIUrl":"https://doi.org/10.1038/s41579-024-01138-7","url":null,"abstract":"In this study, Padhi et al. demonstrate the potential of metagenomics-based approaches for the discovery of natural products from complex ecosystems.","PeriodicalId":18838,"journal":{"name":"Nature Reviews Microbiology","volume":"1 1","pages":""},"PeriodicalIF":88.1,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142776907","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Shigella sonnei: epidemiology, evolution, pathogenesis, resistance and host interactions 子内志贺菌：流行病学、进化、致病机理、抗药性和宿主相互作用
IF 88.1 1区 生物学
Nature Reviews Microbiology Pub Date : 2024-11-27 DOI: 10.1038/s41579-024-01126-x
Timothy A. Scott, Kate S. Baker, Caroline Trotter, Claire Jenkins, Serge Mostowy, Jane Hawkey, Hayden Schmidt, Kathryn E. Holt, Nicholas R. Thomson, Stephen Baker
{"title":"Shigella sonnei: epidemiology, evolution, pathogenesis, resistance and host interactions","authors":"Timothy A. Scott, Kate S. Baker, Caroline Trotter, Claire Jenkins, Serge Mostowy, Jane Hawkey, Hayden Schmidt, Kathryn E. Holt, Nicholas R. Thomson, Stephen Baker","doi":"10.1038/s41579-024-01126-x","DOIUrl":"https://doi.org/10.1038/s41579-024-01126-x","url":null,"abstract":"<p><i>Shigella sonnei</i> is a major cause of diarrhoea globally and is increasing in prevalence relative to other <i>Shigella</i> because of multiple demographic and environmental influences. This single-serotype species has traditionally received less attention in comparison to <i>Shigella flexneri</i> and <i>Shigella dysenteriae</i>, which were more common in low-income countries and more tractable in the laboratory. In recent years, we have learned that <i>Shigella</i> are highly complex and highly susceptible to environmental change, as exemplified by epidemiological trends and increasing relevance of <i>S</i>. <i>sonnei</i>. Ultimately, methods, tools and data generated from decades of detailed research into <i>S</i>. <i>flexneri</i> have been used to gain new insights into the epidemiology, microbiology and pathogenesis of <i>S</i>. <i>sonnei</i>. In parallel, widespread adoption of genomic surveillance has yielded insights into antimicrobial resistance, evolution and organism transmission. In this Review, we provide an overview of current knowledge of <i>S</i>. <i>sonnei</i>, highlighting recent insights into this globally disseminated antimicrobial-resistant pathogen and assessing how novel data may impact future vaccine development and implementation.</p>","PeriodicalId":18838,"journal":{"name":"Nature Reviews Microbiology","volume":"25 1","pages":""},"PeriodicalIF":88.1,"publicationDate":"2024-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142718414","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Methanogens implicated by DNA evidence DNA 证据显示的甲烷菌
IF 88.1 1区 生物学
Nature Reviews Microbiology Pub Date : 2024-11-27 DOI: 10.1038/s41579-024-01135-w
Matthew Kellom
{"title":"Methanogens implicated by DNA evidence","authors":"Matthew Kellom","doi":"10.1038/s41579-024-01135-w","DOIUrl":"https://doi.org/10.1038/s41579-024-01135-w","url":null,"abstract":"This Genome Watch article highlights recent findings that expand the known diversity of methanogenic archaea and the metagenomic evidence that led to their identification and cultivation.","PeriodicalId":18838,"journal":{"name":"Nature Reviews Microbiology","volume":"8 1","pages":""},"PeriodicalIF":88.1,"publicationDate":"2024-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142718413","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The consequences of SARS-CoV-2 within-host persistence SARS-CoV-2 在宿主内持续存在的后果
IF 88.1 1区 生物学
Nature Reviews Microbiology Pub Date : 2024-11-25 DOI: 10.1038/s41579-024-01125-y
Alex Sigal, Richard A. Neher, Richard J. Lessells
{"title":"The consequences of SARS-CoV-2 within-host persistence","authors":"Alex Sigal, Richard A. Neher, Richard J. Lessells","doi":"10.1038/s41579-024-01125-y","DOIUrl":"https://doi.org/10.1038/s41579-024-01125-y","url":null,"abstract":"<p>SARS-CoV-2 causes an acute respiratory tract infection that resolves in most people in less than a month. Yet some people with severely weakened immune systems fail to clear the virus, leading to persistent infections with high viral titres in the respiratory tract. In a subset of cases, persistent SARS-CoV-2 replication results in an accelerated accumulation of adaptive mutations that confer escape from neutralizing antibodies and enhance cellular infection. This may lead to the evolution of extensively mutated SARS-CoV-2 variants and introduce an element of chance into the timing of variant evolution, as variant formation may depend on evolution in a single person. Whether long COVID is also caused by persistence of replicating SARS-CoV-2 is controversial. One line of evidence is detection of SARS-CoV-2 RNA and proteins in different body compartments long after SARS-CoV-2 infection has cleared from the upper respiratory tract. However, thus far, no replication competent virus has been cultured from individuals with long COVID who are immunocompetent. In this Review, we consider mechanisms of viral persistence, intra-host evolution in persistent infections, the connection of persistent infections with SARS-CoV-2 variants and the possible role of SARS-CoV-2 persistence in long COVID. Understanding persistent infections may therefore resolve much of what is still unclear in COVID-19 pathophysiology, with possible implications for other emerging viruses.</p>","PeriodicalId":18838,"journal":{"name":"Nature Reviews Microbiology","volume":"2 1","pages":""},"PeriodicalIF":88.1,"publicationDate":"2024-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142696565","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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