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Exploring the potential performance of 0.2 T low-field unshielded MRI scanner using deep learning techniques.
IF 2 4区 医学
Magnetic Resonance Materials in Physics, Biology and Medicine Pub Date : 2025-04-01 Epub Date: 2025-02-18 DOI: 10.1007/s10334-025-01234-6
Lei Li, Qingyuan He, Shufeng Wei, Huixian Wang, Zheng Wang, Wenhui Yang
{"title":"Exploring the potential performance of 0.2 T low-field unshielded MRI scanner using deep learning techniques.","authors":"Lei Li, Qingyuan He, Shufeng Wei, Huixian Wang, Zheng Wang, Wenhui Yang","doi":"10.1007/s10334-025-01234-6","DOIUrl":"10.1007/s10334-025-01234-6","url":null,"abstract":"<p><strong>Objective: </strong>Using deep learning-based techniques to overcome physical limitations and explore the potential performance of 0.2 T low-field unshielded MRI in terms of imaging quality and speed.</p><p><strong>Methods: </strong>First, fast and high-quality unshielded imaging is achieved using active electromagnetic shielding and basic super-resolution. Then, the speed of basic super-resolution imaging is further improved by reducing the number of excitations. Next, the feasibility of using cross-field super-resolution to map low-field low-resolution images to high-field ultra-high-resolution images is analyzed. Finally, by cascading basic and cross-field super-resolution, the quality of the low-field low-resolution image is improved to the level of the high-field ultra-high-resolution image.</p><p><strong>Results: </strong>Under unshielded conditions, our 0.2 T scanner can achieve image quality comparable to that of a 1.5 T scanner (acquisition resolution of 512 × 512, spatial resolution of 0.45 mm<sup>2</sup>), and a single-orientation imaging time of less than 3.3 min.</p><p><strong>Discussion: </strong>The proposed strategy overcomes the physical limitations of the hardware and rapidly acquires images close to the high-field level on a low-field unshielded MRI scanner. These findings have significant practical implications for the advances in MRI technology, supporting the shift from conventional scanners to point-of-care imaging systems.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":" ","pages":"253-269"},"PeriodicalIF":2.0,"publicationDate":"2025-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143440875","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Improved phosphorus MRSI acquisition through compressed sensing acceleration combined with low-rank reconstruction. 通过压缩感知加速与低秩重构相结合改善了磷MRSI采集。
IF 2 4区 医学
Magnetic Resonance Materials in Physics, Biology and Medicine Pub Date : 2025-04-01 Epub Date: 2024-12-27 DOI: 10.1007/s10334-024-01218-y
Julien Songeon, François Lazeyras, Thomas Agius, Oscar Dabrowski, Raphael Ruttimann, Christian Toso, Alban Longchamp, Antoine Klauser, Sebastien Courvoisier
{"title":"Improved phosphorus MRSI acquisition through compressed sensing acceleration combined with low-rank reconstruction.","authors":"Julien Songeon, François Lazeyras, Thomas Agius, Oscar Dabrowski, Raphael Ruttimann, Christian Toso, Alban Longchamp, Antoine Klauser, Sebastien Courvoisier","doi":"10.1007/s10334-024-01218-y","DOIUrl":"10.1007/s10334-024-01218-y","url":null,"abstract":"<p><strong>Objectives: </strong>Phosphorus-31 magnetic resonance spectroscopic imaging (<sup>31</sup>P-MRSI) is a non-invasive tool for assessing cellular high-energy metabolism in-vivo. However, its acquisition suffers from a low sensitivity, which necessitates large voxel sizes or multiple averages to achieve an acceptable signal-to-noise ratio (SNR), resulting in long scan times.</p><p><strong>Materials and methods: </strong>To overcome these limitations, we propose an acquisition and reconstruction scheme for FID-MRSI sequences. Specifically, we employed Compressed Sensing (CS) and Low-Rank (LR) with Total Generalized Variation (TGV) regularization in a combined CS-LR framework. Additionally, we used a novel approach to k-space undersampling that utilizes distinct pseudo-random patterns for each average. To evaluate the proposed method's performance, we performed a retrospective analysis on healthy volunteers' brains and ex-vivo perfused kidneys.</p><p><strong>Results: </strong>The presented method effectively improves the SNR two-to-threefold while preserving spectral and spatial quality even with threefold acceleration. We were able to recover signal attenuation of anatomical information, and the SNR improvement was obtained while maintaining the metabolites peaks linewidth.</p><p><strong>Conclusions: </strong>We presented a novel combined CS-LR acceleration and reconstruction method for FID-MRSI sequences, utilizing a unique approach to k-space undersampling. Our proposed method has demonstrated promising results in enhancing the SNR making it applicable for reducing acquisition time.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":" ","pages":"161-173"},"PeriodicalIF":2.0,"publicationDate":"2025-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11914371/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142895854","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Pulseq-CEST Library: definition of preparations and simulations, example data, and example evaluations.
IF 2 4区 医学
Magnetic Resonance Materials in Physics, Biology and Medicine Pub Date : 2025-03-27 DOI: 10.1007/s10334-025-01242-6
Alexander Liebeskind, Jan Rüdiger Schüre, Moritz Simon Fabian, Simon Weinmüller, Patrick Schünke, Vladimir Golkov, Daniel Cremers, Moritz Zaiss
{"title":"The Pulseq-CEST Library: definition of preparations and simulations, example data, and example evaluations.","authors":"Alexander Liebeskind, Jan Rüdiger Schüre, Moritz Simon Fabian, Simon Weinmüller, Patrick Schünke, Vladimir Golkov, Daniel Cremers, Moritz Zaiss","doi":"10.1007/s10334-025-01242-6","DOIUrl":"https://doi.org/10.1007/s10334-025-01242-6","url":null,"abstract":"<p><strong>Objectives: </strong>Despite prevalent use of chemical exchange saturation transfer (CEST) MRI, standardization remains elusive. Imaging depends heavily on parameters dictating radiofrequency (RF) events, gradients, and apparent diffusion coefficient (ADC). We present the Pulseq-CEST Library, a repository of CEST preparation and simulation definitions, including example data and evaluations, that provides a common basis for reproducible research, rapid prototyping, and in silico deep learning training data generation.</p><p><strong>Materials and methods: </strong>A Pulseq-CEST experiment requires (i) a CEST preparation sequence, (ii) a Bloch-McConnell parameter set, (iii) a Bloch-McConnell simulation, and (iv) an evaluation script. Pulseq-CEST utilizes the Bloch-McConnell equations to model in vitro and in vivo conditions. Using this model, a candidate sequence or environment can be held constant while varying other inputs, enabling robust testing.</p><p><strong>Results: </strong>Data were compared for amide proton transfer weighted (APTw) and water shift and B1 (WASABI) protocols using a five-tube phantom and simulated environments. Real and simulated data matched anticipated spectral shapes and local peak characteristics. The Pulseq-CEST Library supports similar experiments with common sequences and environments to assess new protocols and sample data.</p><p><strong>Discussion: </strong>The Pulseq-CEST Library provides a flexible mechanism for standardizing and prototyping CEST sequences, facilitating collaborative development. With the capability for expansion, including open-source incorporation of new sequences and environments, the library accelerates the invention and spread of novel CEST and other saturation transfer approaches, such as relayed NOEs (rNOEs) and semisolid magnetization transfer contrast (MTC) methods.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":" ","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-03-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143719767","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Multi-center QA of ultrahigh-field systems.
IF 2 4区 医学
Magnetic Resonance Materials in Physics, Biology and Medicine Pub Date : 2025-03-24 DOI: 10.1007/s10334-025-01232-8
Oliver Kraff, Markus W May
{"title":"Multi-center QA of ultrahigh-field systems.","authors":"Oliver Kraff, Markus W May","doi":"10.1007/s10334-025-01232-8","DOIUrl":"https://doi.org/10.1007/s10334-025-01232-8","url":null,"abstract":"<p><p>Over the past two decades, ultra-high field (UHF) magnetic resonance imaging (MRI) has evolved from pure investigational devices to now systems with CE and FDA clearance for clinical use. UHF MRI offers enhanced diagnostic value, especially in brain and musculoskeletal imaging, aiding in the differential diagnosis of conditions like multiple sclerosis and epilepsy. However, to fully harness the potential of UHF, multi-center studies and quality assurance (QA) protocols are critical for ensuring reproducibility across different systems and sites. This becomes even more vital as the UHF community comprises three generations of magnet design, and many UHF sites are currently upgrading to the latest system architecture. Hence, this review presents multi-center QA measurements that have been performed at UHF, in particular from larger consortia through their \"travelling heads\" studies. Despite the technical variability between different vendors and system generations, these studies have shown a high level of reproducibility in structural and quantitative imaging. Furthermore, the review highlights the ongoing challenges in QA, such as transmitter performance drift and the need for a standard reliable multi-tissue phantom for RF coil calibration, which are crucial for advancing UHF MRI in both clinical and research applications.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":" ","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-03-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143700812","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthetic DWI: contrast improvement for diffusion-weighted imaging in prostate using T1 shine-through by synthesizing images with adjusted TR and TE.
IF 2 4区 医学
Magnetic Resonance Materials in Physics, Biology and Medicine Pub Date : 2025-03-24 DOI: 10.1007/s10334-025-01243-5
Yu Ueda, Tsutomu Tamada, Atsushi Higaki, Ayumu Kido, Hiroyasu Sanai, Kazunori Moriya, Taro Takahara, Makoto Obara, Marc Van Cauteren
{"title":"Synthetic DWI: contrast improvement for diffusion-weighted imaging in prostate using T1 shine-through by synthesizing images with adjusted TR and TE.","authors":"Yu Ueda, Tsutomu Tamada, Atsushi Higaki, Ayumu Kido, Hiroyasu Sanai, Kazunori Moriya, Taro Takahara, Makoto Obara, Marc Van Cauteren","doi":"10.1007/s10334-025-01243-5","DOIUrl":"https://doi.org/10.1007/s10334-025-01243-5","url":null,"abstract":"<p><strong>Objective: </strong>To investigate whether synthetic DWI (SyDWI) calculated with short TR and zero TE can improve diffusion contrast in prostate compared to conventional DWI acquired with standard TR and TE.</p><p><strong>Materials and methods: </strong>Thirty-two patients who underwent multiparametric MRI (mp-MRI) on a 3.0 T scanner were enrolled. For SyDWI, DWIs at b0 were acquired with two different TRs and TEs in addition to b1000 and b2000 images acquired with single conventional TR and TE. Contrast ratio (CR) was compared between SyDWI calculated with TR of 1000 ms and TE of 0 ms and conventional DWI acquired with TR of 6000 ms and TE of 70 ms.</p><p><strong>Results: </strong>The mean CR between prostate cancer (PCa) and normal prostate, and between PCa and benign prostatic hyperplasia (BPH), is significantly higher in SyDWI compared to conventional DWI for both b-values of 1000 and 2000 s/mm<sup>2</sup>. In addition, contrast within some lesions is now visualized, suggesting that tumour heterogeneity can be observed that is not seen with conventional DWI.</p><p><strong>Conclusion: </strong>SyDWI calculated with TR of 1000 ms and TE of 0 ms significantly improves diffusion contrast between PCa and normal prostate or BPH, and within the lesion, compared to conventional DWI as a result of T1 shine-through.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":" ","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-03-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143700817","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Assessing measurement consistency of a diffusion tensor imaging (DTI) quality control (QC) anisotropy phantom.
IF 2 4区 医学
Magnetic Resonance Materials in Physics, Biology and Medicine Pub Date : 2025-03-22 DOI: 10.1007/s10334-025-01244-4
Nicholas Simard, Alec D Fernback, Norman B Konyer, Fergal Kerins, Michael D Noseworthy
{"title":"Assessing measurement consistency of a diffusion tensor imaging (DTI) quality control (QC) anisotropy phantom.","authors":"Nicholas Simard, Alec D Fernback, Norman B Konyer, Fergal Kerins, Michael D Noseworthy","doi":"10.1007/s10334-025-01244-4","DOIUrl":"https://doi.org/10.1007/s10334-025-01244-4","url":null,"abstract":"<p><strong>Objectives: </strong>We evaluated a quality control (QC) phantom designed to mimic diffusion characteristics and white matter fiber tracts in the brain. We hypothesized that acquisition of diffusion tensor imaging (DTI) data on different vendors and over multiple repeated measures would not contribute to significant variability in calculated diffusion tensor scalar metrics such as fractional anisotropy (FA) and mean diffusivity (MD).</p><p><strong>Materials and methods: </strong>The DTI QC phantom was scanned using a 32-direction DTI sequence on General Electric (GE), Siemens, and Philips 3 Tesla scanners. Motion probing gradients (MPGs) were investigated as a source of variance in our statistical design, and data were acquired on GE and Siemens scanners using GE, Siemens, and Philips vendor MPGs for 32 directions. In total, 8 repeated scans were made for each GE/Siemens combination of vendor and MPGs with 8 repeated scans on a Philips machine using its stock DTI sequence. Data were analyzed using 2-way ANOVAs to investigate repeat scan and vendor variances and 3-way ANOVAs with repeat, MPG, and vendor as factors.</p><p><strong>Results: </strong>No statistical differences (i.e., P > 0.05) were found in any DTI scalar metrics (FA, MD) or for any factor, suggesting system constancy across imaging platforms and the specified phantom's reliability and reproducibility across vendors and conditions.</p><p><strong>Discussion: </strong>A DTI QC phantom demonstrates that DTI measurements maintain their consistency across different MRI systems and can contribute to a standard that is more reliable for quantitative MRI analyses.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":" ","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-03-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143692437","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metrology for MRI: the field you've never heard of.
IF 2 4区 医学
Magnetic Resonance Materials in Physics, Biology and Medicine Pub Date : 2025-03-19 DOI: 10.1007/s10334-025-01238-2
Matt G Hall, Matt Cashmore, Hyo-Min Cho, Bernd Ittermann, Kathryn E Keenan, Christoph Kolbitsch, Changwoo Lee, Chengwei Li, Asante Ntata, Katie Obee, Zhang Pu, Stephen E Russek, Karl F Stupic, Lukas Winter, Luca Zilberti, Michael Steckner
{"title":"Metrology for MRI: the field you've never heard of.","authors":"Matt G Hall, Matt Cashmore, Hyo-Min Cho, Bernd Ittermann, Kathryn E Keenan, Christoph Kolbitsch, Changwoo Lee, Chengwei Li, Asante Ntata, Katie Obee, Zhang Pu, Stephen E Russek, Karl F Stupic, Lukas Winter, Luca Zilberti, Michael Steckner","doi":"10.1007/s10334-025-01238-2","DOIUrl":"https://doi.org/10.1007/s10334-025-01238-2","url":null,"abstract":"<p><p>Quantitative MRI has been an active area of research for decades and has produced a huge range of approaches with enormous potential for patient benefit. In many cases, however, there are challenges with reproducibility which have hampered clinical translation. Quantitative MRI is a form of measurement and like any other form of measurement it requires a supporting metrological framework to be fully consistent and compatible with the international system of units. This means not just expressing results in terms of seconds, meters, etc., but demonstrating consistency to their internationally recognized definitions. Such a framework for MRI is not yet complete, but a considerable amount of work has been done internationally towards building one. This article describes the current state of the art for MRI metrology, including a detailed description of metrological principles and how they are relevant to fully quantitative MRI. It also undertakes a gap analysis of where we are versus where we need to be to support reproducibility in MRI. It focusses particularly on the role and activities of national measurement institutes across the globe, illustrating the genuinely international and collaborative nature of the field.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":" ","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143663731","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Using intra-voxel incoherent motion MRI to dynamically evaluate the attenuating effects of donafenib combined with carvedilol in a thioacetamide-induced hepatic fibrosis rat model.
IF 2 4区 医学
Magnetic Resonance Materials in Physics, Biology and Medicine Pub Date : 2025-03-17 DOI: 10.1007/s10334-025-01241-7
Jiacheng Liu, Yaowei Bai, Wei Yao, Peng Sun, Binqian Zhou, Xiaoming Liu, Bin Liang, Chuansheng Zheng
{"title":"Using intra-voxel incoherent motion MRI to dynamically evaluate the attenuating effects of donafenib combined with carvedilol in a thioacetamide-induced hepatic fibrosis rat model.","authors":"Jiacheng Liu, Yaowei Bai, Wei Yao, Peng Sun, Binqian Zhou, Xiaoming Liu, Bin Liang, Chuansheng Zheng","doi":"10.1007/s10334-025-01241-7","DOIUrl":"https://doi.org/10.1007/s10334-025-01241-7","url":null,"abstract":"<p><strong>Objective: </strong>This study aimed to dynamically evaluate the attenuating effects of donafenib combined with carvedilol using intra-voxel incoherent motion (IVIM) MRI at different time points of disease course in a thioacetamide (TAA)-induced hepatic fibrosis rat model.</p><p><strong>Methods: </strong>In this study, 40 male Sprague-Dawley rats received TAA for 6 weeks to induce liver fibrosis and were divided into four groups randomly (N = 10). From week 3 to week 6 of modeling, each group of rats received daily gavage of vehicle, carvedilol (CARV), donafenib (DON), and donafenib plus carvedilol (DON + CARV), respectively. IVIM MRI was used to assess the degree of liver fibrosis in the above groups at 0, 2, 4, and 6 weeks after modeling. Liver fibrosis was classified according to the METAVIR scoring system (F0-F4). IVIM parameters were calculated using a biexponential fitting model, and a least-squares fitting approach was applied for parameter estimation.</p><p><strong>Results: </strong>The mean pathological collagen areas and the expression of α-SMA and collagen I in the CARV, DON, and DON + CARV groups were significantly less than that in the vehicle group (P < 0.001). IVIM-derived parameters (D, D<sup>*</sup>, and f) and ADC values were negatively correlated with the fibrosis levels (D: r<sup>2</sup> = 0.594, P < 0.001; D<sup>*</sup>: r<sup>2</sup> = 0.556, P < 0.001; f: r<sup>2</sup> = 0.737, P < 0.001; ADC: r<sup>2</sup> = 0.694, P < 0.001). At 4 and 6 weeks after modeling, the mean IVIM parameters and ADC values of the DON + CARV group were significantly higher than those of the vehicle group.</p><p><strong>Conclusion: </strong>IVIM MRI is a noninvasive and valuable dynamic monitoring tool for liver fibrosis, and it was useful to monitor the dynamic inhibition process of donafenib and carvedilol on liver fibrosis in a TAA-induced rat model.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":" ","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-03-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143649582","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
MRI acquisition and reconstruction cookbook: recipes for reproducibility, served with real-world flavour.
IF 2 4区 医学
Magnetic Resonance Materials in Physics, Biology and Medicine Pub Date : 2025-03-06 DOI: 10.1007/s10334-025-01236-4
Jonathan I Tamir, Moritz Blumenthal, Jiachen Wang, Tal Oved, Efrat Shimron, Moritz Zaiss
{"title":"MRI acquisition and reconstruction cookbook: recipes for reproducibility, served with real-world flavour.","authors":"Jonathan I Tamir, Moritz Blumenthal, Jiachen Wang, Tal Oved, Efrat Shimron, Moritz Zaiss","doi":"10.1007/s10334-025-01236-4","DOIUrl":"https://doi.org/10.1007/s10334-025-01236-4","url":null,"abstract":"<p><p>MRI acquisition and reconstruction research has transformed into a computation-driven field. As methods become more sophisticated, compute-heavy, and data-hungry, efforts to reproduce them become more difficult. While the computational MRI research community has made great leaps toward reproducible computational science, there are few tailored guidelines or standards for users to follow. In this review article, we develop a cookbook to facilitate reproducible research for MRI acquisition and reconstruction. Like any good cookbook, we list several recipes, each providing a basic standard on how to make computational MRI research reproducible. And like cooking, we show example flavours where reproducibility may fail due to under-specification. We structure the article, so that the cookbook itself serves as an example of reproducible research by providing sequence and reconstruction definitions as well as data to reproduce the experimental results in the figures. We also propose a community-driven effort to compile an evolving list of best practices for making computational MRI research reproducible.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":" ","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-03-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143567580","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advancing sustainable magnetic resonance imaging access in Africa: review of clinical performance of MRI scanners using ACR MagPhan in Ghana.
IF 2 4区 医学
Magnetic Resonance Materials in Physics, Biology and Medicine Pub Date : 2025-03-03 DOI: 10.1007/s10334-025-01240-8
Shirazu Issahaku, Francis Hasford, Theophilus A Sackey
{"title":"Advancing sustainable magnetic resonance imaging access in Africa: review of clinical performance of MRI scanners using ACR MagPhan in Ghana.","authors":"Shirazu Issahaku, Francis Hasford, Theophilus A Sackey","doi":"10.1007/s10334-025-01240-8","DOIUrl":"https://doi.org/10.1007/s10334-025-01240-8","url":null,"abstract":"","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":" ","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143542470","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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