{"title":"Polybenzenoid Hydrocarbons in the S1 State: Simple Structural Motifs Predict Electronic Properties and (Anti)aromaticity","authors":"Fatimah Khaleel, Sabyasachi Chakraborty, Renana Gershoni-Poranne","doi":"10.1002/poc.70012","DOIUrl":"https://doi.org/10.1002/poc.70012","url":null,"abstract":"<p>Polybenzenoid hydrocarbons (PBHs) are widely studied for their semiconductive properties and potential applications in organic electronics and photochemistry. Understanding their behavior in excited states is crucial for optimizing their performance in these applications. Here, we computationally investigate a dataset of 43 unbranched <i>cata</i>-condensed PBHs in their first singlet excited state (S₁), revealing clear correlations between molecular structure and electronic properties. By analyzing these molecules through their annulation patterns—specifically the arrangement of linear (L) and angular (A) tricyclic subunits and tetracyclic zigzag (Z) and curve (C) motifs—we establish a predictive hierarchy (L > Z > C > A) for the location of unpaired electrons and Baird-antiaromaticity. This structural approach enables semiquantitative prediction of key properties, including excitation energies, magnetic response, and singlet fission capability. Notably, we find that singlet fission propensity is dependent on both the length of the Longest L sequence and the position of the L motifs within the sequence. These insights, derived from the analysis of small tri- and tetracyclic components and validated on larger systems, provide a practical framework for understanding and designing PBH-based materials.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"38 5","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-03-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/poc.70012","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143689966","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Mechanism and Diastereoselectivity of the Photo-/NHC Cocatalyzed Fluoroacylation of Benzofurans: A Theoretical View","authors":"Zehua Li, Jiying Liu, Jiabin Liu, Panpan Bao, Huixian Jing, Hui Chen, Wenjing Zhang","doi":"10.1002/poc.70007","DOIUrl":"https://doi.org/10.1002/poc.70007","url":null,"abstract":"<div>\u0000 \u0000 <p>The NHC/photoredox cocatalysis proposes an alternative to conventional methods for acylation of the unsaturated bonds. But it is still a great challenge to effectively control the stereoselectivities stemming from couplings of the ketyl radicals and the alkyl radicals. In this work, we have selected the photo-/NHC cocatalyzed fluoroaroylation of benzofurans as the computational model for density functional theory (DFT) studies, intending to unveil mechanisms of the fluorine-induced diastereoselectivities and thus to provide guidance to future rational design of promising catalytic reactions with high stereoselectivities. The computational results reveal that a fluorine-bearing zwitterion intermediate is yielded after nucleophilic addition of the NHC catalyst to the acyl fluorides, because fluorine anion is a poor leaving group. The cross-coupling of the ketyl radical and the tertiary carbon radical is the diastereoselectivity-determining step, and the configuration with the bulky NHC-stabilized ketyl radical bonded <i>trans</i> to the α-fluorine substitution is energetically favor over that giving the <i>cis</i> configuration. The distortion–interaction energy calculations combined with the geometry analysis indicate that the repulsion of the α-fluorine atom on the neighboring carbon results in significant distortions of the two coupling partners in the <i>cis</i>-configuration transition state and therefore leads to high diastereoselectivities. In addition, it is unveiled that the nucleophilicity of the carbene atom could be substantially influenced by electron delocalization. Moreover, the steric hindrance arose from the N(2)-phenyl group warrants attention as it may reduce remarkable geometry distortions with approach of the acyl fluoride compound.</p>\u0000 </div>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"38 4","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-03-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143612576","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Citrate-Based Ionic Liquids for CO2 Capture—A Computational Approach Toward Environmentally Benign Ionic Liquid Anions","authors":"Uttama Mukherjee","doi":"10.1002/poc.70009","DOIUrl":"https://doi.org/10.1002/poc.70009","url":null,"abstract":"<div>\u0000 \u0000 <p>This work aims to explore and characterize citrate as an anion of nontoxic and biocompatible origin, which is a crucial step to developing a sustainable CO<sub>2</sub> capture process through ionic liquids (ILs). Citrate ILs have recently been synthesized and utilized as solvents and catalysts for various synthetic purposes in the industry. These are found to be easily recycled, nonpolluting, less corrosive, and easy to synthesize. In this work, citrate–CO<sub>2</sub> and citrate–bmim (1-butyl-3-methylimidazolium) ion pair (IP)–CO<sub>2</sub> interactions have been theoretically explored via carboxylation reactions and various electronic structure calculations. The results indicate favorable citrate–CO<sub>2</sub> interactions in the gas as well as the aqueous phase resulting in monocarboxylates, dicarboxylates, and tricarboxylates of citrates owing to the availability of its three carboxylate O atoms. Even as citrate is paired with bmim, it shows the possibility of multiple site CO<sub>2</sub> absorptions. This system should thus serve as a pathway for enhanced CO<sub>2</sub> capture and better desorption by reducing the formation of carbene–CO<sub>2</sub> complex (reduced basicity of the anion and enhanced steric hindrance of the cation). The study reveals that in the IP, at least one of the citrate O atoms can form a covalent carboxylate (chemisorption) with CO<sub>2</sub> while other available O sites may weakly bind CO<sub>2</sub> (physisorption).</p>\u0000 </div>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"38 4","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143554656","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
A. V. Dolganov, A. D. Yudina, L. A. Klimaeva, O. Yu. Ganz, Yu. V. Ulyakina, A. A. Burmistrova, T. O. Karpunina, A. A. Kuzmicheva, S. G. Kostryukov
{"title":"Unexpected the Mechanistic Pathway of the Hydrogen Evolution Reaction in the Presence of N-Substituted Hydro-Derivatives of Ortho-Bipyridines","authors":"A. V. Dolganov, A. D. Yudina, L. A. Klimaeva, O. Yu. Ganz, Yu. V. Ulyakina, A. A. Burmistrova, T. O. Karpunina, A. A. Kuzmicheva, S. G. Kostryukov","doi":"10.1002/poc.70010","DOIUrl":"https://doi.org/10.1002/poc.70010","url":null,"abstract":"<div>\u0000 \u0000 <p>Using cyclic voltammetry, the electrochemical properties and electrocatalytic activity in the reaction of molecular hydrogen formation in the presence of 2,2′-bipyridinium-1,1′-diium and 2,2′-bipyridinium-1-ium perchlorates were studied. The electrochemical reduction product of 2,2′-bipyridinium-1,1′-diium perchlorate decomposes to form molecular hydrogen, but in the case of 2,2′-bipyridinium-1-ium perchlorate, a two-electron reduction product is formed −(E)-1H,1′H-2,2′-bipyridinylidene. It has been shown that the hydrogen evolution reaction (HER) in the presence of 2,2′-bipyridinium-1,1′-diium and 2,2′-bipyridinium-1-ium perchlorates occurs at the same potentials but through different mechanisms. In both cases, the potential is −0.85 V according to the CECE mechanism, but at a potential of −1.25 V according to the ECEC mechanism. In both cases, the key intermediate, through which both mechanisms are realized, is (E)-1H,1′H-2,2′-bipyridinylidene.</p>\u0000 </div>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"38 4","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-02-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143521828","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The Importance of Strain on the Relative Energies of Bridgehead Radicals","authors":"Gary W. Breton","doi":"10.1002/poc.70004","DOIUrl":"https://doi.org/10.1002/poc.70004","url":null,"abstract":"<div>\u0000 \u0000 <p>Bridgehead radicals are increasingly commonly-encountered intermediates in organic chemistry. These carbon-centered radicals, however, may experience unique strain energies due to pyramidalization at the bridgehead carbon as enforced by the bicyclic frameworks. In this study, a series of related bicyclic bridgehead radicals were analyzed using the G3MP2B3 computational protocol. The adamantyl and cubyl radicals were also included in the study. The energies of the radicals were analyzed with reference to the similarly-substituted <i>tert</i>-butyl radical via a hyperhomodesmotic equation. While the relative energies were found to weakly correlate with the change in pyramidalization at the bridgehead carbons upon radical formation, a much stronger correlation was observed with the difference in strain energies between the saturated bicyclic compounds and the corresponding bridgehead radicals.</p>\u0000 </div>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"38 4","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143455918","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The Position of ‘Proton Transfer’ Phenomena in Case of Fluoride Detection: A Minireview","authors":"Atanu Mahata, Arabinda Mallick","doi":"10.1002/poc.70008","DOIUrl":"https://doi.org/10.1002/poc.70008","url":null,"abstract":"<div>\u0000 \u0000 <p>Fluoride ion possessing substantial biological importance demands widespread applications on the basis of physiological and detrimental effects on human body and environmental aspects. Therefore, attractive attention has been paid by the researchers to reach the utmost stage of development of versatile colorimetric and fluorometric fluoride ion sensors. For this purpose, proton transfer phenomenon is an excellent pathway to trigger the recognition of fluoride ion using various kinds of sensor molecules. A strong mode of binding interaction between the chemosensor and F<sup>−</sup> ion was streamlined in terms of colorimetry, fluorometry and NMR- and DFT-based theoretical studies. This minireview article summarizes the recent development of various fluoride sensors based upon the proton transfer–mediated signalling mechanisms, namely, hydrogen bonding–promoted proton transfer, excited state intermolecular proton transfer (ESPT) and excited state intramolecular proton transfer (ESIPT).</p>\u0000 </div>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"38 4","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-02-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143431245","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Morad M. El-Hendawy, Samar T. Hassan, Emad E. El-Katori, Mahmoud M. A. Mohamed
{"title":"A Computational Prediction: Enhancing Visible Light Harvesting Through Minor Modification of Donor Moiety in Triphenylamine-Based Dyes for DSSCs","authors":"Morad M. El-Hendawy, Samar T. Hassan, Emad E. El-Katori, Mahmoud M. A. Mohamed","doi":"10.1002/poc.70005","DOIUrl":"https://doi.org/10.1002/poc.70005","url":null,"abstract":"<div>\u0000 \u0000 <p>Five triphenylamine-based dyes were theoretically investigated using density functional theory (DFT) and time-dependent density functional theory (TDDFT) due to their structural configuration of (D–π–A) which has potential applications as sensitizers for dye-sensitized solar cells (DSSCs). One dye was sourced from the literature, (E)-2-cyano-3-(5-(6-(diphenylamino)-3,3-dimethyl-3H-indol-2-yl)thiophen-2-yl)acrylic acid, denoted as (I), and the remaining dyes (from II to V) are inspired by the former with minor structural change in the indole moiety of donor part. These molecular structures are composed of different diphenyl indole amine species (donor part), thiophene (π-bridge), and cyanoacrylic acid (acceptor part). This study focused on the effect of small structural change in the five-membered ring of the indole moiety on the geometric, electronic, and optical properties of the studied dyes as well as their potential applications as sensitizers for DSSCs. Due to this structural change, a twist in the molecular skeleton of the designed dyes was observed, resulting in a new band at a longer wavelength that spans the visible region. This band is attributed to the phenomenon of twisting intramolecular charge transfer (TICT). The findings reveal that the minor structural change in the indole moiety enhanced the harvesting character of designed dyes that makes them promising candidates for application in DSSCs.</p>\u0000 </div>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"38 4","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-02-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143431244","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Unexpected Inhibition of the Knoevenagel Condensation in Methanol by Iodonium Salt Served as Electrophilic Activator","authors":"Alexandra A. Sysoeva","doi":"10.1002/poc.70006","DOIUrl":"https://doi.org/10.1002/poc.70006","url":null,"abstract":"<div>\u0000 \u0000 <p>Halogen bond donors are recognized as electrophilic catalysts in reactions involving carbonyl compounds. This study describes an unexpected inhibition of the Knoevenagel condensation by the catalyst. To elucidate the intricacies of the inhibition mechanism, the overall reaction order and rate constants were determined using <sup>1</sup>H NMR spectroscopy, and further experiments with different nucleophiles were conducted. The findings revealed that the inhibition of the primary reaction is attributed to a substantial acceleration of the side reaction involving aldehyde methanolysis, which hinders the formation of the final alkene product.</p>\u0000 </div>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"38 3","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-02-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143423967","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"False Identification of (Anti)aromaticity in Polycyclic Molecules in Ground and Excited States Through Incorrect Use of NICS","authors":"Péter J. Mayer, Henrik Ottosson","doi":"10.1002/poc.70000","DOIUrl":"https://doi.org/10.1002/poc.70000","url":null,"abstract":"<p>Aromaticity is a key concept in physical organic chemistry. However, as it cannot be measured directly, it is assessed indirectly via other properties (energetic, electronic, geometric and magnetic). Although these properties describe aromaticity, they are not solely related to aromaticity as the observed values also can stem from, for example, magnetically induced local currents at certain atoms or groups, or strain in the σ-skeleton. This can lead to misinterpretations. Here, we highlight a pitfall in the (anti)aromaticity assessment of polycyclic molecules when it is mainly based on nucleus independent chemical shifts (NICSs). The NICS index can be misinterpreted to indicate ‘aromaticity’ or ‘antiaromaticity’ in nonaromatic rings as a result of paratropic or diatropic ring currents in adjacent rings. We explore if such false indications by NICS are (i) stronger in Baird-aromatic or -antiaromatic excited states (mainly triplet and quintet, but also singlet) than in closed-shell singlet ground states, and (ii) if a paratropic ring current in an adjacent ring causes stronger or weaker false ‘aromaticity’ than a diatropic one causes false ‘antiaromaticity’. Based on our computations we conclude that larger aromatic rings in all types of states (e.g., a triplet state Baird-aromatic cyclooctatetraene ring) have greater influence than smaller ones, yet, we see no indication that the effect is stronger in excited states. Instead, annulene rings are more influential in their paratropic (antiaromatic) states, regardless if ground or excited states, than in their diatropic (aromatic) ones.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"38 3","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/poc.70000","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143380823","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Godfred Boakye Adusei, Albert Aniagyei, Elliot Menkah, Caroline R. Kwawu, Gabriel Amankwah, Richmond Arhin, Hawa Osman, Evans Adei
{"title":"Periselectivity, Chemoselectivity, and Regioselectivity of the Cycloaddition Reaction of Aza-Oxyallyl Cations With Cinnamaldehyde: A Density Functional Theory Study","authors":"Godfred Boakye Adusei, Albert Aniagyei, Elliot Menkah, Caroline R. Kwawu, Gabriel Amankwah, Richmond Arhin, Hawa Osman, Evans Adei","doi":"10.1002/poc.70003","DOIUrl":"https://doi.org/10.1002/poc.70003","url":null,"abstract":"<div>\u0000 \u0000 <p>This study theoretically investigates the factors controlling the periselectivity, chemoselectivity, and regioselectivity of the [3 + 2] cycloaddition reaction of aza-oxyallyl cation with cinnamaldehyde to form oxazolidinone. The research utilizes hybrid density functional theory (DFT) method at the B3LYP-D3, B3LYP, M06, and M062X coupled with the 6-311G (d, p) level of theories to explain that the [3 + 2] chemoselective addition of aza-oxyallyl cation across the carbonyl bond of cinnamaldehyde through its C and N reactive sites is more favorable than any other plausible mechanism. Generally, electron-donating groups (EDGs) on aza-oxyallyl cation decrease the activation barriers, whereas electron-withdrawing groups (EWGs) increase the activation barrier. The GEDT values predict a very low polar reaction for the [3 + 2] cycloaddition reaction.</p>\u0000 </div>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"38 3","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143380822","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}