Journal of animal science最新文献

{"title":"363 Effects of supplementation of vitamin B complex on the performance of beef calves during a 42-d preconditioning program","authors":"Erica Ferri, Aline Rezende, Ana Laura Ramalho, Carlos Eduardo Dos Santos, Matheus Ferreira, Jeff S Heldt, Chance G Farmer, Juliana Ranches","doi":"10.1093/jas/skae234.086","DOIUrl":"https://doi.org/10.1093/jas/skae234.086","url":null,"abstract":"The objective of this study was to evaluate the effects of supplementation of vitamin B complex on post-weaning performance of beef calves. The study was conducted during fall of 2023 at Eastern Oregon Agriculture Research Center (EOARC; Burns, OR). At weaning (d 0), 63 calves [Angus × Hereford; body weight (BW) = 252 ± 3.6 kg] were randomly assigned to 1 of 3 treatments: 1) Control, 2) VitB1, or 3) VitB2. Calves assigned to Control treatment served as a negative control and were not supplemented with vitamin B complex. Calves assigned to treatment VitB1 were supplemented at 1g/calf daily, while calves assigned to VitB2 treatment were supplemented at 2g/calf daily of vitamin B complex during the 42 d of preconditioning. Upon weaning processing, calves were allocated to 21 pens (3 calves/pen) and treatments were allocated to each pen (7 pens/treatment). Vitamin B complex [Vivalto, pantothenic acid (B5; 40,000 mg/kg), pyridoxine (B6; 20,000 mg/kg), folic acid (B9; 3,200 mg/kg), biotin (B7; 3,200,000 mcg/kg), cobalamin (B12; 320,000 mcg/kg); Selko USA, Indianapolis, IN] supplementation was offered at pen level beginning on d 1 and until the end of the preconditioning phase (d 42). Vitamin B complex was offered to calves assigned to vitamin B complex treatment mixed with 1.3 kg of dried distiller’s grains. Additionally, calves had free access to chopped alfalfa-grass hay mix and whole corn. Pen intake was recorded daily. On d 0, BW and blood samples were collected from all calves. Additional blood and BW were collected on d 1, 3, 7, 14, 21, 42 post-weaning. Body weights were used to calculate calf average daily gain (ADG) and blood samples were assayed for acute phase proteins (ceruloplasmin and haptoglobin). Additional blood samples will be analyzed for cortisol and vitamin B concentrations. Variables were analyzed considering pen as the experimental unit and pen(treatment) as a random effect. Blood variables were evaluated as repeated measures and effects of treatment, day, and treatment the interactions were analyzed with the MIXED procedure of SAS (SAS Inst. Inc., Cary, NC). Significance was set at P ≤ 0.05. No treatment effects (P = 0.98) were observed for final BW (283, 283, and 284 kg respectively for Control, Vit1, and Vit2) or for ADG (P = 0.53; 0.735, 0.795, and 0.747 kg/d respectively for Control, Vit1, and Vit2). Similarly, no treatment effects were observed for the acute phase proteins analyzed, ceruloplasmin (P = 0.66; 27, 30, and 33 µg/dL respectively for Control, Vit1, and Vit2) and haptoglobin (P = 0.41; 0.55, 0.62, and 0.59 mg/mL, respectively for Control, Vit1, and Vit2). Supplementation of vitamin B complex to beef calves post-weaning does not seem to affect calf performance, regardless of the level of supplementation.","PeriodicalId":14895,"journal":{"name":"Journal of animal science","volume":"14 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142233256","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"PSVI-24 Gene expression profiles of granulosa and peripheral white blood cells from fertile and sub-fertile beef heifers","authors":"Priyanka Banerjee, Wellison Jarles Silva Da Diniz, Paul W W Dyce","doi":"10.1093/jas/skae234.635","DOIUrl":"https://doi.org/10.1093/jas/skae234.635","url":null,"abstract":"Beef heifer fertility issues contribute to a major economic loss in the cow-calf production industry. Therefore, identifying beef heifers with superior genetic potential for improved fertility would increase profitability. This study aimed to identify differences in the transcriptome profiles from granulosa and peripheral white blood cells (pWBCs) of beef heifers with varying reproductive potential. For this, Angus-Simmental crossbred heifers were subjected to an estrus synchronization and fixed-time artificial insemination (AI) protocol (7-D CO-Synch + CIDR) followed by exposure for 60-d to a fertile bull. Depending on the presence or absence of conceptus 120 d post-AI, heifers were classified as fertile (pregnant by AI) or sub-fertile (non-pregnant by AI or bull-breeding). Pregnancies were terminated, and all animals in both groups (fertile, n = 8; and sub-fertile, n = 5) were cycling when the blood and ovaries were collected from each heifer. Total RNA was extracted from the pWBCs and granulosa cells and subjected to library preparation and sequencing on the Nova-Seq platform. The read counts were obtained after data quality control using FastQC v0.11.9 and MultiQC v1.12 and alignment to the Ensemble’s ARS UCD1.2 Bos taurus genome reference using STAR aligner v2.7.5. The filtered data were subjected to differential expression analysis using DESeq2. We identified 1,061 and 72 significantly differentially expressed genes (DEGs) with P-values ≤ 0.05 and absolute (log2 fold change) ≥ 0.5 from pWBC and granulosa, respectively. Notably, 12 targets including 9 protein coding genes (PLCL1, DNER, GNAS, CDH3, PER1, ITGA2B, CXCL12, ENSBTAG00000048613, ENSBTAG00000051519), bta-mir-2887-1, 5-8S-rRNA and U5 were found as DEGs in both the tissues. Based on a differential co-expression analysis using PCIT, we identified GNAS and DNER as hub genes in pWBC and the granulosa cells of the sub-fertile heifer group. The 12 shared genes were over-represented for pathways such as NF kappa B and chemokine signaling, regulation of actin cytoskeleton, and platelet activation. Some of the identified genes have been previously associated with fertility, while others are novel. A detailed understanding of the underlying biological mechanisms of the top genes and a follow-up study with a larger sample size at different time points could validate the candidates identified in this study for their role as potential therapeutic targets.","PeriodicalId":14895,"journal":{"name":"Journal of animal science","volume":"185 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142233398","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"338 Classroom mental wellness exercise improves wellness domains","authors":"Kari K Turner, John M Gonzalez","doi":"10.1093/jas/skae234.473","DOIUrl":"https://doi.org/10.1093/jas/skae234.473","url":null,"abstract":"Poor mental health is a rising problem in undergraduate students, with anxiety and depression leading mental health issues. Insufficient or low physical activity, social isolation, and loneliness are among risk factors that predict mental health issues. Increased demand for already limited mental health resources such as counseling, combined with the stigma surrounding mental health has led to many issues going untreated. Mental health can be comprised of several domains such as academic, physical, emotional, financial, occupational, and stage of life. Improving individual domains will improve overall mental wellness. The objective of this study was to improve mental wellness in individual domains by discussing mental health and encouraging undergraduate students to reduce predictive factors and specifically focus on self-selected wellness domains. Following a 60-min classroom discussion in an animal science course on the prevalence of mental health issues and the common wellness domains (Academic, Emotional, Financial, Interpersonal, Occupational, Physical, and Stage of Life) students (n = 24) rated their current feeling of wellness in each domain on a Likert-scale of 0 (totally lacking) to 6 (completely fulfilled) in an anonymous Qualtrics survey. Strategies on improving the different wellness domains were then discussed, and students were placed into groups based on common domains they would like to improve, and the groups helped individual members identify semester personal goals. A class-wide social media group was formed, and students were given bonus points for posting pictures and texts of progression towards their goals. To encourage participation and support from group members, groups were awarded additional bonus points for having the greatest member activity. After 12 wk, students were given a post-course survey to rate their wellness domain fulfillments, as well as report the amount of time dedicated to improving the specific domains. Pre-and post-course wellness fulfillment ratings were compared using the Mann-Whitney-U Test in SPSS, and Spearman’s rho was used to determine correlations between post-fulfillment ratings and time dedicated to each domain. Fulfillment of Emotional and Physical increased following the exercise (P ≤ 0.016), and Academic tended to increase (P = 0.079). Time spent fulfilling a specific domain was positively correlated with the respective domain for Academic (P = 0.003), Emotional (P < 0.001), Interpersonal (P = 0.006), Physical (P < 0.001), and Stage of Life (P < 0.001) and tended to be positively correlated (P = 0.084) for Occupational. There was no correlation between time spent fulfilling the Financial domain and Financial fulfillment score (P = 0.183). Employing open classroom discussions about mental health and encouraging students to become proactive in their strategies for improving specific mental wellness domains increases their feelings of fulfillment in those domains.","PeriodicalId":14895,"journal":{"name":"Journal of animal science","volume":"36 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142233402","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"109 Dam and calf influences on colostrum yield and quality in beef cattle","authors":"Allison M Meyer, Colby A Redifer, Abigail R Rathert-Williams","doi":"10.1093/jas/skae234.318","DOIUrl":"https://doi.org/10.1093/jas/skae234.318","url":null,"abstract":"To determine factors affecting colostrum yield and quality, data from 148 cow-calf pairs over 6 experiments were combined. In each experiment, single rear quarter colostrum yield was obtained post-calving but pre-suckling. Colostrum IgG was determined by ELISA, and colostrum lactose, triglycerides (as a measure of total fat), and protein were determined by colorimetric analyses. Total IgG and nutrients were calculated as the concentration multiplied by single-quarter yield. Calf birth weight and expelled placental dry weight were also collected post-calving. Mixed linear models (experiment as a random effect) were used to determine the effects of dam age (primiparous: 2 yr, young: 3 to 4 yr, mature: ≥ 5 yr), dam peripartum body condition score (BCS; thin: < 5, moderate: 5 to 5.99, fleshy: ≥ 6), and calf sex on colostrum yield (single-quarter colostrum weight) and quality. Pearson correlation coefficients were also determined for colostrum yield with dam pre-calving body weight (BW), calf birth weight, calf birth weight relative to dam BW, whole placental dry weight, and gestation length. Mature dams had the greatest (P ≤ 0.03) and primiparous dams had the least (P ≤ 0.001) colostrum yield and total lactose. Colostrum from primiparous dams had greater (P = 0.03) IgG concentration than mature and greater (P ≤ 0.001) protein concentration than young and mature. Mature dams had greater (P ≤ 0.02) total IgG, total protein, and total triglycerides compared with both primiparous and young. Colostrum yield was less (P ≤ 0.04) for thin than moderate and fleshy dams. Total IgG was unaffected (P = 0.11) by dam BCS; however, thin dams had greater (P ≤ 0.04) IgG concentration than moderate and fleshy. Lactose concentration and total lactose were less (P ≤ 0.02) in colostrum from thin compared with moderate dams. Protein concentration was greater (P = 0.001) in thin than moderate dams, but thin dams had less (P ≤ 0.02) total protein compared with moderate and fleshy. Dam BCS did not affect (P ≥ 0.59) colostrum triglyceride concentration or total triglycerides. Colostrum yield and quality were not affected (P ≥ 0.22) by calf sex. Pre-calving dam BW was positively correlated with colostrum yield (r = 0.46, P < 0.001). Colostrum yield was also positively correlated with calf birth weight (r = 0.31, P < 0.001) and whole placental dry weight (r = 0.26, P = 0.007), but tended to be negatively correlated with calf birth weight relative to dam BW (r = -0.14, P = 0.09). Gestation length had no relationship (P = 0.31) with colostrum yield. Overall, colostrum yield and quality are negatively affected in young and thin beef dams. In addition, both dam and calf weight have positive relationships with colostrum yield, likely mediated by endocrine action associated with placental size.","PeriodicalId":14895,"journal":{"name":"Journal of animal science","volume":"102 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142233403","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"252 Evaluating the impact of inclusion of field pea (Pisum sativum) on rumen fermentation profile, production parameters, and composition of rumen bacterial community of dairy cattle","authors":"Arezoo Alizadeh, Hooman Derakhshani, Jan Cornelis Plaizier","doi":"10.1093/jas/skae234.403","DOIUrl":"https://doi.org/10.1093/jas/skae234.403","url":null,"abstract":"Field peas (FP) are characterized by a crude protein (CP) content ranging from 24% to 28% of dry matter (DM). Approximately 78% of this protein is rumen degradable. Hence, FP can be a viable alternative protein source for livestock. We examined the effect of partially substituting corn-based concentrates with FP on production parameters, rumen fermentation profile, and the composition of the rumen bacterial community in lactating dairy cows. Lactating, non-pregnant Holstein cows (n = 12) were used in a repeated 3 × 3 Latin square with 21-d experimental periods, with the last 7 d used for sample and data collection. Cows were fed a basal TMR (control), or partially mixed diets to which 3.9% (LP), or 7.8% DM (HP) of FP were added. The control diet contained on a DM basis 17.4% CP, 4.5% crude fat, 28.0% starch, and an estimated 1.67 Mcal/kg of net energy for lactation (NEL). The FP contained 22.5% CP, 1.67% crude fat, 44.7% starch, and an estimated 1.81 Mcal NEL/kg. The rumen bacterial composition was analyzed by high-throughput sequencing of the V4 region of the 16S rRNA gene. Cows fed the HP diet had greater (P < 0.05) ruminal ammonia (NH3-N), milk urea nitrogen (MUN), and plasma urea concentrations than those fed control and LP diets. Digestibility of DM was greater (P < 0.05) for cows fed control and LP diets than for cows fed the HP diet. The CP total tract digestibility decreased (P < 0.05) with increasing levels of peas in the diet. Compared with the control, the HP diet tended (P = 0.09) to increase the total ruminal concentration of branched-chain volatile fatty acids. The addition of FP to the diets did not affect the alpha diversity, as indicated by Shannon’s index, and the beta diversity of the rumen bacterial community [p(PERMANOVA) = 0.97]. However, the relative abundances of several bacterial taxa, including amplicon sequence variants (ASVs) belonging to Bacteroidia, Clostridia, and Gammaproteobacteria decreased in response to the addition of FP to the diet. Taken together, our results suggest that up to an inclusion rate of 7.8% DM, FP can be included in corn grain-based diets of lactating dairy cows without adverse effects on milk yield, milk composition, rumen fermentation characteristics, and rumen microbial composition.","PeriodicalId":14895,"journal":{"name":"Journal of animal science","volume":"4 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142231475","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"158 Probiotics in silage production","authors":"Luiz Gustavo Nussio","doi":"10.1093/jas/skae234.440","DOIUrl":"https://doi.org/10.1093/jas/skae234.440","url":null,"abstract":"Probiotics may improve ruminal and/or intestinal conditions and according to FAO/WHO, 2002 which states “mono or mixed strains of living microorganisms which confer desirable health benefits on the host when used adequately”. It should be nonpathogenic, able to give a viable cell count, has a positive effect on the health of the host, and enhance the functions of the intestinal tract. The most commonly used probiotics are from Lentilactobacillus genus formerly quoted as Lactobacillus acidophilus, Lactobacillus lactis, Lactobacillus plantarum, Lactobacillus bulgaricus, Lactobacillus casei, Lactobacillus helveticus, Lactobacillus salivarius, Bifido bacterium spp., Enterococcus faecium, Enterococcus faecalis, Streptococcus thermophilus, Escherichia coli bacteria, and other probiotic fungi such as Saccharomyces cerevisiae and Saccharomyces boulardii. Probiotics may benefit farm animals by improving feed efficiency, body weight gain, milk yield and immune response. In silages, the major claim is regarding the microbiome, coming either from the wild original microbial population endophytic and epiphytic or mainly from silage microbial additives. After silage fermentation, microbiome is largely changed towards less diversity of viable species of bacteria, yeasts and fungi and many different compounds resulted from the substrate undergone through the metabolic pathways. The survival of the original/added microbiome throughout the silage fermentation still remains as a key question and results are largely influenced across trials. Only recently, the use of next-generation sequencing and PacBio single-molecule real-time sequencing technology offered high-throughput and enabled the discovery of a vast majority of microbiota and relative abundances of various microbes in the community to the genus and species precision. The addition of microbial additives during ensiling not only has shown positive effects on silage quality by altering the bacterial community but also changed microbiome and metabolites in the digestive tract of ruminants. Moreover, undisputably metabolites in the rumen were correlated with the bacterial communities. The lactic acid bacteria inoculants in silage production might be beneficial for animal performance and health by influencing the bacterial community and metabolites in the digestive tract of ruminants. Lactic acid bacteria (LAB) may increase intake and digestibility. The positive effects on digestibility are related to degrading feruloyl ester linkages and modifying the matrix structure of forage lignocellulose based on the feruloyl esterase-producing Lactobacillus (Lactiplantibacillus) plantarum. LAB can also act as antimicrobial agents by producing bacteriocins or organic compounds harmful to microbial membranes such as 3-phenyllactic acid. The enhancement of the antioxidant capacity to mitigate oxidative stress in ruminants fed silages was also linked to the free ferulic acid. Some biofunctional metabolites, such as bacterios","PeriodicalId":14895,"journal":{"name":"Journal of animal science","volume":"63 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142231304","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"PSV-14 The effects of calcium cyanamide on greenhouse gases, ammonia emissions, and the microbiome of dairy cattle lagoon water","authors":"Alice Rocha, Briana Morales, Hamed El Mashad, Yuee Pan, Yongjing Zhao, Frank M Mitloehner","doi":"10.1093/jas/skae234.585","DOIUrl":"https://doi.org/10.1093/jas/skae234.585","url":null,"abstract":"Dairy manure management is responsible for a significant amount of greenhouse gas emissions (GHG) in California. Aside from redesigning infrastructure to adopt alternative manure management systems, there are few options available to farmers to mitigate emissions without substantial financial investment. Calcium cyanamide, a new manure additive, showed significant reductions in GHG emissions when applied to fresh dairy cow slurry, but has not been tested on dairy lagoon water. The aim of the present study was to investigate the effects of calcium cyanamide on GHG and NH3 emissions and the microbiome of dairy lagoon water. Lagoon water was collected from a commercial dairy, and distributed into 12 stainless steel barrels. Three treatments (n = 4/treatment) of different doses of calcium cyanamide were tested: high (LW-HD; 1 kg/m3 lagoon water), low (LW-LD; 0.5 kg/m3 lagoon water), and control with no calcium cyanamide (LW-CONT; n = 4). Each barrel was sampled over two, 14-d periods, staggered to four barrels at a time, using OdoFlux chambers to monitor emissions for carbon dioxide (CO2,), methane (CH4), nitrous oxide (N2O), and ammonia (NH3). Treatments LW-LD and LW-HD contained significantly more total solids, total nitrogen and total carbon compared with LW-CONT. There was also a significantly greater concentration of acetic acid in LW-LD and LW-HD treatments compared with LW-CONT. CO2 emissions in LW-LD and LW-HD were 2.96% and 12.03% less than LW-CONT. CH4 emissions in LW-LD and LW-HD were 80.9% and 85.13% less compared with LW-CONT. N2O emissions in LW-LD and LW-HD were 81.1% and 82.66% less than LW-CONT. However, NH3 fluxes were greater in LW-LD and LW-HD compared with LW-CONT by 65.26% and 65.73%, respectively. The microbiome of the lagoon water was also affected, with reductions in relative abundance of the Proteobacteria phylum responsible for nitrification in LW-LD and LW-HD and increases in the Firmicutes phylum containing acetogenic bacteria. Calcium cyanamide could inhibit methanogenesis by increasing acetogenic bacteria that compete with methanogens for fermentation substrates. Further research is needed to investigate the efficacy of calcium cyanamide in a commercial lagoon setting.","PeriodicalId":14895,"journal":{"name":"Journal of animal science","volume":"8 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142231352","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"PSIX-22 Maternal methane, carbon dioxide, and oxygen flux compared with progeny gas flux","authors":"Stacey A Gunter, Corey A Moffet, Emalee J Friend","doi":"10.1093/jas/skae234.828","DOIUrl":"https://doi.org/10.1093/jas/skae234.828","url":null,"abstract":"Red Angus heifers [n = 19; body weight (BW) = 370 ± 8.1 kg) and their paired offspring (BW = 283 ± 4.2 kg; 18 heifers, 1 steer) were used to compare the respiration gas parameters between dams and their progeny over 2 calving cycles (8 pairs in the 1st cycle, 11 in the 2nd). The methane (CH4), carbon dioxide (CO2) emissions and oxygen (O2) consumption of the dams were measured at 14 mo of age over a 70-d period using an automated head-chamber system (AHCS) that measured the flux of these 3 gases. Dams grazed native mixed-grass prairie and were offered a daily supplement of alfalfa (Medicago sativa L.) pellets (1.0 kg) via the AHCS. Dams were artificially inseminated using sexed semen (female) from a single Black Angus sire. The gas fluxes of the progeny were measured, beginning at 11 mo of age, over a 70-d period. Like the dams, during their measurement period, the progeny grazed native mixed-grass prairie and were offered a daily supplement (1.0 kg) of alfalfa pellets via the AHCS. Pearson correlations were developed between the 70-d means of daily CH4 and CO2 emissions, O2 consumption, CH4:CO2 ratio, respiratory quotient (RQ), and heat of production estimates for the dams and their progeny by regressing maternal parameters on the parameters of the progeny, using beginning dam and progeny BW as covariates, and year as an indicator variable. A dam’s CH4 emission was very strongly correlated with that of their offspring (ρ = 0.86). The CO2 emission and O2 consumption of the dams were both also very strongly (ρ = 0.92 and ρ = 0.97, respectively) correlated, with that of their progeny. The heat production and CH4:CO2 ratio of the dams were very strongly (ρ = 0.96) and fairly (ρ = 0.50) correlated, respectively, with that of their progeny. Lastly, the RQ of the dam was also very strongly correlated (ρ = 0.87) with the RQ of the progeny. These results indicate that CH4 and CO2 emissions, O2 consumption, CH4:CO2 ratio, and heat of production of the dam are fairly to very strongly correlated to the gas flux parameters of their progeny. Hence, even with this small dataset, there is evidence that beef cattle traits related to greenhouse gas emissions are somewhat heritable and could potentially be selected in breeding animals to decrease greenhouse gas emission intensity.","PeriodicalId":14895,"journal":{"name":"Journal of animal science","volume":"2 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142233253","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"117 Population structure and genetic diversity of U.S. Polypay Sheep in the National Sheep Improvement Program","authors":"Carrie S Wilson, Jessica L Petersen, Luiz F Brito, Brad A Freking, Sara M Nilson, Ronald M Lewis","doi":"10.1093/jas/skae234.036","DOIUrl":"https://doi.org/10.1093/jas/skae234.036","url":null,"abstract":"The development of the Polypay breed focused on improving the lifetime productivity of the Western range ewe with the objective of ewes lambing twice a year starting at 1 yr of age. The Polypay was developed at the U.S. Sheep Experiment Station (USSES) in 1968 as a four-breed composite with 25% each of Dorset, Rambouillet, Targhee, and Finnsheep. The breed is versatile and rugged enough to be used extensively in Western sheep production and throughout the Central and Eastern U.S. in intensive accelerated lambing systems. Our objective was to define the current population structure and genetic diversity in this breed using pedigree- and genomic-based methods as the industry adopts genomic selection. Pedigree records from Polypay breeders participating in the National Sheep Improvement Program representing 193 flocks were combined with pedigree records from USSES (n = 162,997) tracing back to the origins of the breed. A subset of these pedigreed sheep from 32 flocks born from 2011 to 2023 were genotyped with the GGP Ovine 50K BeadChip (n = 1,856). Quality control measures were applied for marker and animal call rates and to remove markers in high linkage disequilibrium. Pedigree completeness and quality was 9.6, 2.3, and 4.6 for mean maximum, mean complete, and mean equivalent generations, respectively. Pedigree-based inbreeding for the full data was 2.19%; for the subset of pedigreed animals also genotyped, it was 2.94%. The rate of inbreeding was consistently 0.07%/yr across years (P = 0.88). Measures of genomic inbreeding for genotyped sheep were 1.26% for Wright’s inbreeding coefficient, measured as heterozygote deficiency, and 2.90% for inbreeding based on runs of homozygosity. Ten rams from 8 flocks contributed up to 20.3% of the current gene pool. Pedigree-based measures of effective population size ranged from 70 to 249 while the genomic estimate was 118. Fixed and rare (≤ 0.01) alleles accounted for 3.2% and 1.4% of the markers, respectively. The majority of runs of homozygosity (72.1%) were less than 6 Mb, indicative of founder effects and ancient inbreeding rather than recent inbreeding. Based on principal component (PC) analysis, PC 1 suggested a separation of USSES sheep from the rest. Model-based population structure showed differentiation among flocks as did Wright’s Fixation Index (FST) values with a mean of 0.07. High levels of genetic diversity exist in the Polypay as demonstrated by low inbreeding, high heterozygosity, and large effective population sizes. Population substructure exists in the population as shown by PC analysis, model-based population structure, and FST values. These parameters indicate that sufficient genetic diversity is present to move forward with genomic selection. Genetic diversity measures should be revisited periodically once genomic selection is implemented in the breed. USDA is an equal opportunity provider and employer.","PeriodicalId":14895,"journal":{"name":"Journal of animal science","volume":"62 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142233289","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"457 Prediction of methane emissions using rumination time and milk mid-infrared spectral data via artificial neural networks","authors":"Lucas S F Lopes, Saeed Shadpour, Filippo Miglior, Dan Tulpan, Flávio S Schenkel, Christine F Baes","doi":"10.1093/jas/skae234.364","DOIUrl":"https://doi.org/10.1093/jas/skae234.364","url":null,"abstract":"Cattle methane emissions (ME) account for approximately 6% of global anthropogenic greenhouse gas emissions. Given the challenges in measuring ME directly from individual animals, there is a need for the development of novel indirect methods. Rumination time (RT) and milk mid-infrared spectral data (MIR) show promise for the indirect assessment of ME in dairy cows. Both traits have been used as indicators of reproduction, production, and gas emission traits. Methodologies combining the use of MIR and machine learning algorithms such as artificial neural networks (ANN) for the prediction of ME have been successful; however, the inclusion of RT has not been assessed. This study aimed to evaluate the impact of RT on milk MIR-based models using ANN for the prediction of ME. One-week averages for RT, ME, and MIR from first-lactation Canadian Holstein cows (n = 412) were calculated. Six data sets were evaluated using a multilayer perceptron ANN. All sets included age at calving, season of calving and days in milk as model factors, but varied in using milk MIR data points (1,060 or 235) and including or not including RT. The ANN architecture consisted of one input layer, one hidden layer with one or more neurons, and one output layer. Results showed that sets using both RT and milk MIR data achieved correlations from 0.5 to 0.6 between predicted and observed ME. Notably, the inclusion of RT did not improve the performance of the models. Predictions may be improved through the use of larger data sets, the use of daily records, and inclusion of data across herds and lactations. Optimizing parameters of the ANN could also improve predictions. Further research is needed to fully assess the potential of RT as a predictor of ME in dairy cows.","PeriodicalId":14895,"journal":{"name":"Journal of animal science","volume":"60 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142233290","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}