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Multi-omics analyses reveal key immunological and metabolic correlates of mortality in HIV-associated Pneumocystis pneumonia. 多组学分析揭示了hiv相关肺囊虫肺炎死亡率的关键免疫学和代谢相关因素。
IF 6.8 1区 医学
JCI insight Pub Date : 2026-10-06 DOI: 10.1172/jci.insight.206942
Peter Rossi-Smith, Ayanda Trevor Mnguni, Dora Pungan, Robert J Samuels, Vaishnavi R Kumaran, Leena Syed, Trevor Ferris, Kamil Skirlo, Joseph N Jarvis, Nelesh P Govender, Graeme Meintjes, Sean Wasserman, Jay K Kolls, Rachel Pj Lai
{"title":"Multi-omics analyses reveal key immunological and metabolic correlates of mortality in HIV-associated Pneumocystis pneumonia.","authors":"Peter Rossi-Smith, Ayanda Trevor Mnguni, Dora Pungan, Robert J Samuels, Vaishnavi R Kumaran, Leena Syed, Trevor Ferris, Kamil Skirlo, Joseph N Jarvis, Nelesh P Govender, Graeme Meintjes, Sean Wasserman, Jay K Kolls, Rachel Pj Lai","doi":"10.1172/jci.insight.206942","DOIUrl":"https://doi.org/10.1172/jci.insight.206942","url":null,"abstract":"<p><p>Pneumocystis jirovecii pneumonia (PCP) remains a major cause of life-threatening respiratory failure in people with advanced HIV, yet the biological factors associated with mortality are incompletely understood. We performed integrated transcriptomic, proteomic, and metabolomic profiling of bronchoalveolar lavage fluid from 42 adults with HIV-associated PCP, relating molecular signatures to mortality. We found that fungal burden, measured by sputum immunofluorescence, Pneumocystis qPCR, and 1,3-β-D-glucan, did not differ between survivors and non-survivors or correlate with baseline gas exchange. Instead, non-survivors exhibited a bronchoalveolar immunometabolic failure signature characterised by marked depletion of immunoglobulins and complement, reduced pattern recognition receptors and fibroblast growth factor family proteins, and broad disruption of extracellular matrix organisation. Metabolomic profiling revealed enrichment of arginine-urea cycle and tricarboxylic acid pathways, with coordinated accumulation of arginine, citrulline, and TCA cycle intermediates consistent with nitrosative and mitochondrial stress. An integrated proteo-metabolomic score summarising this state was significantly higher in non-survivors and did not correlate with fungal burden or cytomegalovirus co-infection. In an immunodeficient precision-cut lung slice model, antigen-screened intravenous immunoglobulin restored macrophage-mediated Pneumocystis clearance, providing proof-of-concept for opsonic augmentation. Our findings indicate that mortality in HIV-PCP is defined by profound immunometabolic failure, highlighting humoral depletion and impaired alveolar repair as potential targets for host-directed adjunctive therapy.</p>","PeriodicalId":14722,"journal":{"name":"JCI insight","volume":" ","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149109912","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Impaired regulation of nuclear calcium signals is a driver of chronic liver disease. 核钙信号的调节受损是慢性肝病的驱动因素。
IF 6.8 1区 医学
JCI insight Pub Date : 2026-10-06 DOI: 10.1172/jci.insight.204059
Jittima Weerachayaphorn, Mateus T Guerra, Naotaka Kugiyama, Emma Kruglov, Dejian Zhao, Piyachat Chansela, Vitoon Saengsirisuwan, Marie E Robert, Teruo Utsumi, Yasuko Iwakiri, Michael H Nathanson
{"title":"Impaired regulation of nuclear calcium signals is a driver of chronic liver disease.","authors":"Jittima Weerachayaphorn, Mateus T Guerra, Naotaka Kugiyama, Emma Kruglov, Dejian Zhao, Piyachat Chansela, Vitoon Saengsirisuwan, Marie E Robert, Teruo Utsumi, Yasuko Iwakiri, Michael H Nathanson","doi":"10.1172/jci.insight.204059","DOIUrl":"https://doi.org/10.1172/jci.insight.204059","url":null,"abstract":"<p><p>Chronic liver disease affects over a billion people worldwide. Despite diverse etiologies, a unifying feature of chronic liver disease is the liver's impaired ability to regenerate during progression to cirrhosis, but no common molecular mechanism has been identified. Hepatocyte proliferation and liver regeneration depend on nucleoplasmic calcium (Ca2+) signals, and Ca2+ signals in hepatocytes depend on the type 2 inositol trisphosphate receptor (ITPR2) calcium release channel. Here, we found that ITPR2 was localized in part to the hepatocyte nucleus, and this localization depended on the presence of nucleoporin 62 (NUP62). Loss of either ITPR2 or NUP62 disrupted nuclear Ca2+ signaling, and impaired Ca2+ signals in the nucleus blunted nuclear entry of β-catenin. Remarkably, both ITPR2 and NUP62 are progressively lost from hepatocytes in patients with the four most common types of chronic liver disease. These findings identify a microdomain regulating Ca2+ signaling in the hepatocyte nucleus that becomes progressively disrupted as liver disease progresses. Preservation of this nuclear microdomain may be a novel approach to maintain liver regeneration and slow the progression to cirrhosis in chronic liver disease.</p>","PeriodicalId":14722,"journal":{"name":"JCI insight","volume":" ","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149109906","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Anti-CRF antibody-mediated HPA axis modulation induces selective fat mass loss with lean mass preservation. 抗crf抗体介导的HPA轴调节诱导选择性脂肪质量减少和瘦质量保存。
IF 6.8 1区 医学
JCI insight Pub Date : 2026-10-06 DOI: 10.1172/jci.insight.210525
Zachary A Krumm, Tariful Islam, Caroline M Watson, Yong Ran, Yona Levites, Hunter S Futch, Luming Yin, Edgardo Rodriguez-Lebron, Xuefei Liu, Kazi Farhana Afroz, Ariella Goloborodsky, Thomas B Ladd, Kristy D Dillon, Danny Ryu, Jennifer L Bizon, Jada Lewis, Karen A Scott, Annette de Kloet, Nicholas T Seyfried, Eric G Krause, Karen N McFarland, Todd E Golde
{"title":"Anti-CRF antibody-mediated HPA axis modulation induces selective fat mass loss with lean mass preservation.","authors":"Zachary A Krumm, Tariful Islam, Caroline M Watson, Yong Ran, Yona Levites, Hunter S Futch, Luming Yin, Edgardo Rodriguez-Lebron, Xuefei Liu, Kazi Farhana Afroz, Ariella Goloborodsky, Thomas B Ladd, Kristy D Dillon, Danny Ryu, Jennifer L Bizon, Jada Lewis, Karen A Scott, Annette de Kloet, Nicholas T Seyfried, Eric G Krause, Karen N McFarland, Todd E Golde","doi":"10.1172/jci.insight.210525","DOIUrl":"https://doi.org/10.1172/jci.insight.210525","url":null,"abstract":"<p><p>The hypothalamic-pituitary-adrenal (HPA) axis integrates central neural processing and responses to stress with endocrine and metabolic responses. We utilized a monoclonal antibody binding corticotrophin-releasing factor (anti-CRF) to achieve durable HPA axis modulation. In mice, anti-CRF treatment decreased plasma corticosterone, food-intake, body weight and fat mass, but preserved lean mass and improved metabolic parameters including insulin sensitization. These body composition effects were observed in middle aged mice on normal chow or high fat diet, aged mice, and Mc4r-/- and ob/ob mice. Single-dose studies demonstrated impacts on weight gain and body composition lasting beyond the period of pharmacological target engagement. Multi-organ transcriptomic and proteomic analyses revealed organ-specific effects of anti-CRF and are consistent with altered glucocorticoid receptor (GR) signaling as a mediator of the observed phenotypes. These studies support anti-CRF-mediated HPA-axis modulation as a metabolic and anti-obesity therapeutic approach distinct from incretins.</p>","PeriodicalId":14722,"journal":{"name":"JCI insight","volume":" ","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149109743","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dystonia in a Timothy syndrome mouse model uncovers an interaction between Ca2+ and metabolism. 蒂莫西综合征小鼠模型中的肌张力障碍揭示了Ca2+与代谢之间的相互作用。
IF 6.8 1区 医学
JCI insight Pub Date : 2026-10-06 DOI: 10.1172/jci.insight.207748
Patrick Towers, Hong-Gang Wang, Maiko Matsui, Geoffrey S Pitt
{"title":"Dystonia in a Timothy syndrome mouse model uncovers an interaction between Ca2+ and metabolism.","authors":"Patrick Towers, Hong-Gang Wang, Maiko Matsui, Geoffrey S Pitt","doi":"10.1172/jci.insight.207748","DOIUrl":"https://doi.org/10.1172/jci.insight.207748","url":null,"abstract":"<p><p>The hypothesized cellular and molecular mechanisms underlying dystonia are broad and include mutations that perturb Ca2+ signaling, including those affecting voltage gated calcium channels (VGCC). In mice, pharmacological activation of neuronal L-type VGCCs induces dystonia in a dose dependent manner. Here we demonstrate that mice expressing a gain-of-function mutation in the L-type VGCC CaV1.2, associated with Timothy syndrome (TS), exhibit motor dysfunction consistent with dystonia. Although CaV1.2 is broadly expressed throughout peripheral tissues and across the brain, we establish that the dystonia-like behavior is driven by neuronal expression of the mutant calcium channel and observe an associated potential excitatory/inhibitory (E/I) imbalance. Because patients with TS have profound metabolic dysregulation, which is associated with some dystonias, we measured changes in circulating metabolites. The dystonia-like events are sensitive to perturbations in pyruvate metabolism, reminiscent of a subset of dystonias associated with pyruvate dysregulation. Our study provides insight into the potential convergence of previously established causes of dystonia, calcium signaling and metabolic homeostasis.</p>","PeriodicalId":14722,"journal":{"name":"JCI insight","volume":" ","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149109874","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development of insulin resistance in women over the menopause transition. 绝经期妇女胰岛素抵抗的发展。
IF 6.8 1区 医学
JCI insight Pub Date : 2026-10-06 DOI: 10.1172/jci.insight.206342
Arun S Karlamangla, Wei Juan Han, Preethi Srikanthan, Albert Shieh, Duncan Thomas, Barbara Sternfeld, Monique M Hedderson, Gail A Greendale
{"title":"Development of insulin resistance in women over the menopause transition.","authors":"Arun S Karlamangla, Wei Juan Han, Preethi Srikanthan, Albert Shieh, Duncan Thomas, Barbara Sternfeld, Monique M Hedderson, Gail A Greendale","doi":"10.1172/jci.insight.206342","DOIUrl":"https://doi.org/10.1172/jci.insight.206342","url":null,"abstract":"<p><strong>Background: </strong>Body weight and insulin resistance in women increase in midlife. It is not known whether this is driven by the menopause transition or solely by chronological aging. We aimed to determine the role of the menopause transition and menopause-related BMI changes in the development of insulin resistance in midlife women.</p><p><strong>Methods: </strong>Mixed effects, linear spline modeling of longitudinal data in 1315 women, 42- to 52-years-old, pre- or early perimenopausal in 1995 to 1996 with up to 16 follow up visits by 2018. Homeostatic-model-assessed-insulin-resistance (HOMA-IR) was measured up to 12 times. Date of final menstrual period (FMP) was prospectively determined.</p><p><strong>Results: </strong>HOMA-IR increased faster over a 4-year interval extending from 1.5 years prior to 2.5 years after the FMP, than in the years before or after it; p value for both slope changes < 0.0001. In the referent woman (White, age 52 years at FMP, non-smoker, body mass index [BMI] 25.6 kg/m2 at baseline, and not on sex hormone therapy or statins), the average annualized rate of HOMA-IR increase, adjusted for covariates including changes in BMI, was 1.2%, 4.3%, and 0.9% respectively, before, during, and after the 4-year transition.</p><p><strong>Conclusion: </strong>Consistent with an independent effect of the menopause transition, insulin resistance increased significantly faster during the transition (from 1.5 years before the to 2.5 years after the FMP) than in the years preceding or following the transition. Future studies need to investigate mechanisms underpinning this observed association and determine the impact of lifestyle on dampening menopause-associated increases in insulin resistance.</p><p><strong>Funding: </strong>National Institutes of Health.</p>","PeriodicalId":14722,"journal":{"name":"JCI insight","volume":" ","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149109787","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Keratinocyte VISTA attenuates UV light-induced skin injury by suppressing cutaneous type I interferon (IFN-I) response. 角质细胞VISTA通过抑制皮肤I型干扰素(IFN-I)反应来减弱紫外线诱导的皮肤损伤。
IF 6.8 1区 医学
JCI insight Pub Date : 2026-10-06 DOI: 10.1172/jci.insight.200540
Zachary T Peters, Lindsay K Mendyka, J'Voughnn A Blake, Himanshu B Goswami, Angelique N Cortez, Grace E Crossland, Sicong Shan, Elizabeth C Nowak, Myana Keusch, Mrinal K Sarkar, Johann E Gudjonsson, Christopher M Burns, Dorothea T Barton, Bruce R Blazar, Tyler J Curiel, Rodwell Mabaera, Victoria P Werth, Andrea Kalus, Keith B Elkon, Randolph J Noelle, Sladjana Skopelja-Gardner
{"title":"Keratinocyte VISTA attenuates UV light-induced skin injury by suppressing cutaneous type I interferon (IFN-I) response.","authors":"Zachary T Peters, Lindsay K Mendyka, J'Voughnn A Blake, Himanshu B Goswami, Angelique N Cortez, Grace E Crossland, Sicong Shan, Elizabeth C Nowak, Myana Keusch, Mrinal K Sarkar, Johann E Gudjonsson, Christopher M Burns, Dorothea T Barton, Bruce R Blazar, Tyler J Curiel, Rodwell Mabaera, Victoria P Werth, Andrea Kalus, Keith B Elkon, Randolph J Noelle, Sladjana Skopelja-Gardner","doi":"10.1172/jci.insight.200540","DOIUrl":"10.1172/jci.insight.200540","url":null,"abstract":"<p><p>Persistent production of type I interferons (IFN-Is) is a hallmark of cutaneous lupus erythematosus (CLE). Ultraviolet (UV) light stimulates IFN-I response in the skin and exacerbates CLE. Here, we identify V-type immunoglobulin domain-containing suppressor of T cell activation (VISTA) as a negative regulator of both basal and UV-induced IFN-I response in the skin and show that VISTA limits skin photosensitivity in an IFN-I-dependent manner, in part through Stimulator of Interferon Genes (STING). Furthermore, we demonstrate a novel role for VISTA in keratinocytes both at steady state and in response to UV light. Conditional deletion of VISTA in epidermal keratinocytes results in a ~10-fold increase in basal skin IFN-I scores and a heightened UV-induced skin injury score, both of which are dependent on IFN-I signaling. VISTA-targeting monoclonal antibodies suppress the UV-induced IFN-I response in human keratinocytes and in mice expressing human VISTA in vivo, thereby reducing UV-induced skin injury scores. Together, these findings identify VISTA as a keratinocyte-intrinsic checkpoint that restrains STING-associated IFN-I response in the skin and suggest VISTA agonism as a therapeutic strategy to limit photosensitivity in CLE.</p>","PeriodicalId":14722,"journal":{"name":"JCI insight","volume":" ","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149109837","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Targeting HSPA1A with geranylgeranylacetone alleviates ADTKD-UMOD via suppression of endoplasmic reticulum stress and ferroptosis. 香叶酮靶向HSPA1A可通过抑制内质网应激和铁下垂来缓解ADTKD-UMOD。
IF 6.8 1区 医学
JCI insight Pub Date : 2026-10-06 DOI: 10.1172/jci.insight.207210
Wen Shi, Yan Yang, Xianli Wen, Qianqian Wu, Jinxuan Wei, Xin-Lu Wang, Junyuan Shen, Siqi Peng, Xiaoliang Zhang, Bi-Cheng Liu, Bin Wang
{"title":"Targeting HSPA1A with geranylgeranylacetone alleviates ADTKD-UMOD via suppression of endoplasmic reticulum stress and ferroptosis.","authors":"Wen Shi, Yan Yang, Xianli Wen, Qianqian Wu, Jinxuan Wei, Xin-Lu Wang, Junyuan Shen, Siqi Peng, Xiaoliang Zhang, Bi-Cheng Liu, Bin Wang","doi":"10.1172/jci.insight.207210","DOIUrl":"https://doi.org/10.1172/jci.insight.207210","url":null,"abstract":"<p><p>Missense mutations in the UMOD gene are a well-established genetic cause of autosomal dominant tubulointerstitial kidney disease (ADTKD). Here, we report two ADTKD pedigrees carrying de novo UMOD mutations, p.His36Tyr (H36Y) and p.Trp31Cys (W31C). To elucidate the underlying pathogenic mechanisms and explore targeted therapeutic strategies, we generated a UMODH36Y/+ knock-in mouse model using CRISPR/Cas9 technology, which recapitulated the major clinical manifestations observed in patients. Through single-cell RNA sequencing and experimental validation, we demonstrated that uromodulin mutations triggered endoplasmic reticulum (ER) stress and the unfolded protein response, with ferroptosis identified as the predominant mode of cell death in this disease. These findings were further confirmed in plasmid-transfected cell models expressing UMODH36Y and UMODW31C. Moreover, the molecular chaperone HSPA1A was identified as a potential therapeutic target. Geranylgeranylacetone, targeting HSPA1A as a chaperone drug, effectively mitigated endoplasmic reticulum stress, alleviated ferroptosis, and delayed the progression of renal dysfunction. Based on novel uromodulin mutations, our study reveals a pathogenic ER-ferroptosis axis in ADTKD-UMOD, deepens the insight into the pathogenesis of ADTKD-UMOD, and provides a promising strategy for developing chaperone therapy with drug repurposing in genetic kidney diseases.</p>","PeriodicalId":14722,"journal":{"name":"JCI insight","volume":" ","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149109919","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Anti-Notch plus endocrine therapy in ER+ breast cancer inhibits cancer stem cells by increasing DAXX. 雌激素受体阳性乳腺癌抗notch联合内分泌治疗通过增加DAXX抑制肿瘤干细胞。
IF 6.8 1区 医学
JCI insight Pub Date : 2026-09-29 DOI: 10.1172/jci.insight.172506
Kathy S Albain, Debra Wyatt, Andrei Zlobin, Susan G Hilsenbeck, Cheryl M Czerlanis, Daniel S Peiffer, Kyle R Convington, Constantine Godellas, Shelly S Lo, Patricia A Robinson, Kathy Czaplicki, Barbara Busby, Davide Bova, Ping Tang, Patrick J Stiff, Suzanne Aw Fuqua, Lucio Miele, Clodia Osipo
{"title":"Anti-Notch plus endocrine therapy in ER+ breast cancer inhibits cancer stem cells by increasing DAXX.","authors":"Kathy S Albain, Debra Wyatt, Andrei Zlobin, Susan G Hilsenbeck, Cheryl M Czerlanis, Daniel S Peiffer, Kyle R Convington, Constantine Godellas, Shelly S Lo, Patricia A Robinson, Kathy Czaplicki, Barbara Busby, Davide Bova, Ping Tang, Patrick J Stiff, Suzanne Aw Fuqua, Lucio Miele, Clodia Osipo","doi":"10.1172/jci.insight.172506","DOIUrl":"https://doi.org/10.1172/jci.insight.172506","url":null,"abstract":"<p><p>Resistance to endocrine therapy (ET) in ER+ breast cancer is mediated by Notch signaling, but the clinical application of anti-Notch therapy has been limited by the lack of predictive biomarkers. To identify Notch-regulated biomarkers, we conducted a pre-surgical window study evaluating ET combined with the γ-secretase inhibitor (GSI) MK-0752. RNA expressions in tumors were measured using an Affymetrix array and by real-time PCR. ET plus GSI showed more genes were decreased than ET alone. Specifically, DAXX, NOXA, and LFNG RNAs were increased, while fifteen additional transcripts were decreased. Mechanistically, GSI reduced Notch1 occupancy at CSL-binding elements within HES1, HEY2, HEYL, CCND1, MKI67, and DAXX genes, and inhibited cancer stem cells (CSCs) by 90% to 100%. This anti-CSC effect required DAXX, while GSI treatment or Notch1/4 knockdown increased DAXX expression, suggesting transcriptional repression by Notch. Using mouse tumor xenograft studies, ET plus MK-0752 resulted in complete regression of MCF-7 tumors, with DAXX-high tumors showing greater treatment sensitivity. Clinically, high DAXX expression was associated with improved recurrence-free and overall survival. This study found that anti-Notch plus ET in ER+ breast cancer inhibits cancer stem cells by increasing DAXX, a promising predictive biomarker. These findings support clinical evaluation of therapies that increase DAXX expression.</p>","PeriodicalId":14722,"journal":{"name":"JCI insight","volume":" ","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-09-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149080875","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-genome methylation sequencing uncovers PASC signature elicited by T4 lymphocytes, shared with pulmonary fibrosis risk. 全基因组甲基化测序揭示了与肺纤维化风险共享的T4淋巴细胞引发的PASC特征。
IF 6.8 1区 医学
JCI insight Pub Date : 2026-09-29 DOI: 10.1172/jci.insight.210824
Andy Madrid, Joseph Balnis, Lisa A Drake, Anupama Tiwari, Vraj J Patel, Paul J Feustel, Jihua Liu, Sündüz Keleş, Fangxiu Xu, Chris L Wright, Alvaro G Hernandez, Recai Yucel, Marc A Judson, Harold A Singer, Reid S Alisch, Ariel Jaitovich
{"title":"Whole-genome methylation sequencing uncovers PASC signature elicited by T4 lymphocytes, shared with pulmonary fibrosis risk.","authors":"Andy Madrid, Joseph Balnis, Lisa A Drake, Anupama Tiwari, Vraj J Patel, Paul J Feustel, Jihua Liu, Sündüz Keleş, Fangxiu Xu, Chris L Wright, Alvaro G Hernandez, Recai Yucel, Marc A Judson, Harold A Singer, Reid S Alisch, Ariel Jaitovich","doi":"10.1172/jci.insight.210824","DOIUrl":"10.1172/jci.insight.210824","url":null,"abstract":"<p><strong>Background: </strong>Long-COVID, or post-acute sequelae of COVID-19 (PASC), leads to debilitating physical and cognitive deficits. No PASC molecular signature present in patients with diverse symptoms has been described. While PASC engages pathways regulating pro-fibrotic programs, no comparison of PASC with fibrosis-associated epigenetic landscapes has been reported at the bulk or single-cell level. We hypothesize that a subset of DNA methylation changes are present in PASC patients from multiple cohorts, predominate in specific immune or inflammatory cell-types, and overlap with the epigenetic profile of patients at risk of pulmonary fibrosis.</p><p><strong>Methods: </strong>Two distinct prospective cohorts, in 2021 and in 2022-24, involving 203 patients with PASC underwent bulk whole genome methylation sequencing (WGMS). Single-cell WGMS data was generated from an independent PASC cohort. Sixty-eight pre-pandemic patients with conditions elevating risk of pulmonary fibrosis development were compared with PASC.</p><p><strong>Results: </strong>Sixteen differentially methylated regions distinguished PASC versus multiple independent, healthy controls. Single-cell analysis of these regions indicated trending relative hypermethylation at multiple cell types, with T4 lymphocytes eliciting hypermethylation at most of the sequences identified to be PASC-specific DMRs in the bulk analysis. Patients at risk of pulmonary fibrosis development elicited DNA methylation changes overlapping PASC.</p><p><strong>Conclusion: </strong>In two independent prospective cohorts, blood WGMS identifies differentially methylated regions associated with PASC. Hypermethylation of these regions is predominantly, although not exclusively, associated with T4 lymphocytes and overlap with changes present in pre-pandemic pulmonary fibrosis at-risk patients.</p><p><strong>Funding: </strong>National Institutes of Health award HL160661 (AJ); and AI173035 (AJ and RSA).</p>","PeriodicalId":14722,"journal":{"name":"JCI insight","volume":" ","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-09-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149080898","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Autoantibody landscapes in Long COVID with neurological symptoms show heterogeneity without a shared disease signature. 具有神经系统症状的长冠状病毒自身抗体图谱显示异质性,没有共同的疾病特征。
IF 6.8 1区 医学
JCI insight Pub Date : 2026-09-29 DOI: 10.1172/jci.insight.207122
Debanjana Chakravarty, Ravi Dandekar, Vishal D Lashkari, Iris Tilton, Lindsay McAlpine, Jennifer Chiarella, Allison Nelson, Thomas Ngo, PeiXi Chen, Chung-Yu Wang, Aditi Saxena, Bryan Castillo-Rojas, Kelsey Zorn, David R Tribble, Timothy H Burgess, Leah H Rubin, Stephanie A Richard, Brian K Agan, Simon D Pollett, Shelli Farhadian, Serena Spudich, Samuel J Pleasure, Michael R Wilson
{"title":"Autoantibody landscapes in Long COVID with neurological symptoms show heterogeneity without a shared disease signature.","authors":"Debanjana Chakravarty, Ravi Dandekar, Vishal D Lashkari, Iris Tilton, Lindsay McAlpine, Jennifer Chiarella, Allison Nelson, Thomas Ngo, PeiXi Chen, Chung-Yu Wang, Aditi Saxena, Bryan Castillo-Rojas, Kelsey Zorn, David R Tribble, Timothy H Burgess, Leah H Rubin, Stephanie A Richard, Brian K Agan, Simon D Pollett, Shelli Farhadian, Serena Spudich, Samuel J Pleasure, Michael R Wilson","doi":"10.1172/jci.insight.207122","DOIUrl":"10.1172/jci.insight.207122","url":null,"abstract":"<p><strong>Background: </strong>Neurological Long COVID (n-LC) includes persistent cognitive and autonomic symptoms after SARS-CoV-2 infection. Prior studies of post-COVID conditions have described diverse humoral autoreactivity. It remains unclear whether n-LC is associated with a consistent CNS-directed humoral signature.</p><p><strong>Methods: </strong>We performed a cross-cohort case-control analysis to detect autoantibodies in cerebrospinal fluid (CSF) and serum from n-LC participants. In the Yale COVID Mind Study cohort, CSF from n-LC participants and pre-pandemic and recovered controls was assessed using mouse brain immunofluorescence and proteome-wide phage immunoprecipitation sequencing (PhIP-Seq), followed by supervised modeling and orthogonal validation assays. In the Epidemiology, Immunology, and Clinical Characteristics of Emerging Infectious Diseases with Pandemic Potential (IDCRP EPICC) cohort, post-COVID sera collected prior to iPhone- or iPad-based cognitive screening were profiled by PhIP-Seq and compared between participants with and without cognitive impairment.</p><p><strong>Results: </strong>CSF immunoreactivity on mouse brain tissue was observed in both n-LC and controls, with similar overall frequencies. PhIP-Seq identified sparse, patient-specific peptide reactivities to nuclear and neuronal proteins in CSF and serum. Supervised models provided limited discrimination between cases and controls. Candidate autoantigens had limited disease specificity on orthogonal testing. EPICC serum autoantibody profiling similarly failed to distinguish individuals with and without cognitive impairment.</p><p><strong>Conclusions: </strong>Across cohorts and compartments, n-LC was not associated with a shared CNS-directed autoantibody signature using the approaches employed. Observed heterogeneity may reflect biological diversity, although limited statistical power to detect a shared response cannot be excluded.</p><p><strong>Funding: </strong>Grants HU00012020067, HU00012120103, HU00011920111, R01NS125693, R01MH125737, and R01AI157488 from the Defense Health Program and NIH.</p>","PeriodicalId":14722,"journal":{"name":"JCI insight","volume":" ","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-09-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"149080927","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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