Genetic Resources and Crop Evolution最新文献

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Variations in horticultural characteristics in Garcinia gummi-gutta (L.) N. Robson: a cash crop of the humid tropics of India 印度湿热带经济作物 Garcinia gummi-gutta (L.) N. Robson 园艺特征的变化
IF 2 3区 农林科学
Genetic Resources and Crop Evolution Pub Date : 2024-09-13 DOI: 10.1007/s10722-024-02133-w
Pooja Bohra, Ajit Arun Waman, R. Karthika Devi
{"title":"Variations in horticultural characteristics in Garcinia gummi-gutta (L.) N. Robson: a cash crop of the humid tropics of India","authors":"Pooja Bohra, Ajit Arun Waman, R. Karthika Devi","doi":"10.1007/s10722-024-02133-w","DOIUrl":"https://doi.org/10.1007/s10722-024-02133-w","url":null,"abstract":"<p>Malabar tamarind (<i>Garcinia gummi-gutta</i> (L.) N. Robson) is an important horticultural genetic resource having multifaceted uses and is being used as a flavouring agent besides being source of gamboge, seed fat and medicine in the humid tropics. Considering the increasing demand, reducing dependance on wild/ semi-wild population and promotion of cultivation is the need of the hour. Seedling progenies are known to have considerable variability of commercial significance. To identify the superior germplasm with desirable traits, systematic efforts are required. Though such screening from natural population could help in identifying superior genotypes, the data on various yield related traits could be misleading due to differences in the growing conditions of the natural stands. In the present study, the conserved germplasm was evaluated to understand the variations for leaf, fruit and seed morphological parameters apart from their harvesting patterns, yield traits, drying recovery etc. Results revealed that collections showed significant variations for these parameters and unique types viz. GG-05 with early harvesting season (late April onwards), thin peel (5.55 mm), longer pedicel (6.05 mm), and GG-04 with higher yield traits were identified. Further, collections UUF-01 and UUF-03 exhibited irregularity in bearing.</p>","PeriodicalId":12467,"journal":{"name":"Genetic Resources and Crop Evolution","volume":"17 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142178623","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unveiling reproductive biology, phenology, and pollen viability in Lathyrus species to enhance crop improvement 揭示 Lathyrus 物种的生殖生物学、物候学和花粉活力,促进作物改良
IF 2 3区 农林科学
Genetic Resources and Crop Evolution Pub Date : 2024-09-13 DOI: 10.1007/s10722-024-02180-3
Muthusamy Shankar, Ravi Gowthami, Kuldeep Tripathi, Doddamalur Appaji Deepak, Kerur Vishwanath Raghavendra, Anuradha Agrawal
{"title":"Unveiling reproductive biology, phenology, and pollen viability in Lathyrus species to enhance crop improvement","authors":"Muthusamy Shankar, Ravi Gowthami, Kuldeep Tripathi, Doddamalur Appaji Deepak, Kerur Vishwanath Raghavendra, Anuradha Agrawal","doi":"10.1007/s10722-024-02180-3","DOIUrl":"https://doi.org/10.1007/s10722-024-02180-3","url":null,"abstract":"<p>The advancement of <i>Lathyrus</i> through genetic enhancement and cultivar development faces challenges due to limited knowledge about their reproductive biology. Thus, the present study systematically investigates the reproductive biology, phenology, receptivity of stigma, germination and viability of pollen in <i>Lathyrus sativus</i> L. and <i>L. cicera</i> L. Experiments were carried out using 20 accessions of <i>L. sativus</i> and three accessions of <i>L. cicera</i>. Anther dehiscence and stigma receptivity were determined through microscopic observation and hydrogen peroxide test, respectively. Pollen viability was assessed through in vitro pollen germination and fluorescein diacetate (FDA) test. Flowers were found to be bisexual and protogynous, with self-pollination favored by the cleistogamous nature of flowers. Five flower-development and three pod-development stages were classified in both species. The timing of all stages differed significantly among the accessions studied. Stigma receptivity was observed to occur 2–4 days before anther dehiscence and persisted until flower wilting. The study reveals that <i>L. sativus</i> and <i>L. cicera</i> are primarily self-pollinated, underscoring the critical timing of emasculation for successful manual crossing in breeding, ultimately enhancing pod and seed set, and facilitating plant breeders in optimizing hybridization programs.</p>","PeriodicalId":12467,"journal":{"name":"Genetic Resources and Crop Evolution","volume":"3 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142178609","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Descriptors for characterization and evaluation of Indian gooseberry (Emblica officinalis Gaertn) germplasm for utilization in crop improvement 用于表征和评估印度醋栗(Emblica officinalis Gaertn)种质的描述符,以用于作物改良
IF 2 3区 农林科学
Genetic Resources and Crop Evolution Pub Date : 2024-09-12 DOI: 10.1007/s10722-024-02135-8
A. K. Singh, Devendra Pandey, K. Gangadhara, L. P. Yadav, Jagdish Rane, Hare Krishna, G. Devanand, Anil Pawar, Anand Sahil, Prakashbhai Ravat
{"title":"Descriptors for characterization and evaluation of Indian gooseberry (Emblica officinalis Gaertn) germplasm for utilization in crop improvement","authors":"A. K. Singh, Devendra Pandey, K. Gangadhara, L. P. Yadav, Jagdish Rane, Hare Krishna, G. Devanand, Anil Pawar, Anand Sahil, Prakashbhai Ravat","doi":"10.1007/s10722-024-02135-8","DOIUrl":"https://doi.org/10.1007/s10722-024-02135-8","url":null,"abstract":"<p>The Indian gooseberry (<i>Emblica officinalis</i> Gaertn), commonly referred to as <i>Aonla</i>, is a significant medicinal fruit tree native to India. Its homeland harbors a wide spectrum of genetic diversity, relevant to various desirable horticultural traits. Assessing genetic variability for varietal enhancement necessitates a comprehensive capture of both quantifiable and non-quantifiable morphological characteristics. In this study, 49 accessions were meticulously evaluated and characterized for 38 diverse qualitative and quantitative morphological traits. Commercial <i>Aonla</i> cultivars, primarily selected, typically exhibit a semi-spreading or spreading nature. The <i>Aonla</i> germplasm showcases notable discrepancies in morphological traits, spanning growth, flower, bark, and fruit characteristics, reflecting the diversity across its tree. Fruit aspect ratio, defining the relationship between diameter and length, serves as a crucial identifying feature. Variations in total soluble solids, ascorbic acids, pulp: stone ratio, pulp content, fruit dimensions, weight, circumference, and yield per plant were observed across genotypes and varied from 7.5–12.1°brix, 340.72–550.38 mg/100 g, 13.25–19.71, 13.50–42.35 g, 1.79–4.17 cm, 2.28–4.27 cm, 15.97–45.19 g, 7.04–13.44 cm, and 45.70–105.14 kg/tree, respectively. Genetic variability analyses suggest ample opportunities for selection, with correlation research elucidating important selection criteria. Path coefficient analysis identified traits with direct and indirect effects on yield per plant, while principal component analysis offered a comprehensive overview of variability among genotypes. Cluster analysis categorized genotypes into distinct groups, revealing valuable traits for achieving high fruit yield. Overall, the research underscored the importance of morphological traits in assessing <i>Aonla</i> diversity and their role in breeding programs aimed at enhancing quality and yield. The findings provided valuable insights for cultivar selection and future breeding efforts, contributing to the sustainable cultivation and utilization of <i>Aonla</i> germplasm.</p>","PeriodicalId":12467,"journal":{"name":"Genetic Resources and Crop Evolution","volume":"11 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142178624","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Analysis of the extremely diverse local Moroccan almond cultivars provides essential resources for conservation and breeding 对极为多样化的摩洛哥当地杏仁栽培品种进行分析,为保护和育种提供了重要资源
IF 2 3区 农林科学
Genetic Resources and Crop Evolution Pub Date : 2024-09-12 DOI: 10.1007/s10722-024-02166-1
Souhayla Kodad, Christina M. Müller, Mohammad Jawarneh, Annette Becker, Moritz Sanne, Alexander Pfriem, Ahmed Elamrani, Aatika Mihamou, Malika Abid
{"title":"Analysis of the extremely diverse local Moroccan almond cultivars provides essential resources for conservation and breeding","authors":"Souhayla Kodad, Christina M. Müller, Mohammad Jawarneh, Annette Becker, Moritz Sanne, Alexander Pfriem, Ahmed Elamrani, Aatika Mihamou, Malika Abid","doi":"10.1007/s10722-024-02166-1","DOIUrl":"https://doi.org/10.1007/s10722-024-02166-1","url":null,"abstract":"<p>Almond (<i>Prunus amygdalus</i> L.) is a major tree nut species and consumed worldwide. Morocco maintains a long-standing presence of domesticated almonds, hosting a secondary genetic diversity hotspot that demands safeguarding as an important resource for future almond breeding programs. Here, we assessed the pomological diversity of local Beldi almond ecotypes to detect elite trees based on nuts and kernels characteristics. A significant correlation was found among some studied variables. Principal Component Analysis (PCA) for quantitative traits showed that two components explained 78.91% of the total variation and revealed that traits related to fruits contribute to a large proportion of the observed variability. Then, a comprehensive genetic study of 98 almond accession including 93 of the Beldi ecotype and five non-Moroccan cultivars by analyzing 12 Simple Sequence Repeats markers showed high Polymorphism Information Content. We used population structure and PCA to analyze the molecular variance and described the genetic diversity of the identified subpopulations. We identified five subpopulations with little genetic differentiation, but two subpopulations have high genetic diversity. These subpopulations represent promising genetic pools developing novel almond cultivars that can provide high yield in adverse conditions, thereby fostering profitable Moroccan breeding programs for sustainable almond agriculture.</p>","PeriodicalId":12467,"journal":{"name":"Genetic Resources and Crop Evolution","volume":"81 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142178625","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic variability for protein, zinc, and iron content in a chickpea collection under no-tillage system conditions 免耕系统条件下鹰嘴豆系列蛋白质、锌和铁含量的遗传变异性
IF 2 3区 农林科学
Genetic Resources and Crop Evolution Pub Date : 2024-09-12 DOI: 10.1007/s10722-024-02177-y
Aziz Baidani, Abdelmonim Zeroual, Bacar Abdallah Abderemane, Mohammed Mitache, Rachid Aboutayeb, Chafika Houasli, Omar Idrissi
{"title":"Genetic variability for protein, zinc, and iron content in a chickpea collection under no-tillage system conditions","authors":"Aziz Baidani, Abdelmonim Zeroual, Bacar Abdallah Abderemane, Mohammed Mitache, Rachid Aboutayeb, Chafika Houasli, Omar Idrissi","doi":"10.1007/s10722-024-02177-y","DOIUrl":"https://doi.org/10.1007/s10722-024-02177-y","url":null,"abstract":"<p>The development of nutrient-dense chickpea cultivars is a promising way to cope with nutrient deficiency. No-tillage is a sustainable agricultural practice that can help mitigate the adverse effects of climate change on crop productivity. Developing biofortified chickpea cultivars under no-tillage system could optimize the benefits of this agricultural practice, enhancing both productivity and the grain nutritional quality. In this study, the genetic variability for protein, zinc, and iron content was assessed in a chickpea collection grown under no-tillage system in Morocco in order to select accessions with superior quality traits. Substantial genetic variation was recorded for protein (8.08–29.58%), zinc (11.04–35.02 mg/kg), and iron (17.04–86.58 mg/kg) contents. High heritability value was obtained for zinc content (65.83%) compared to protein (15.38%) and iron (10.7%) content, suggesting high potential selection gain for this trait. Conventional tillage yielded higher protein and iron contents, while no-tillage showed the higher zinc content. MGIDI allowed the selection of 22 chickpea accessions that could be used as donors for protein, zinc, and iron biofortification under no-tillage conditions.</p>","PeriodicalId":12467,"journal":{"name":"Genetic Resources and Crop Evolution","volume":"386 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142178627","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparative cytogenetics of kenaf (Hibiscus cannabinus L.) breeding lines reveal chromosomal variability and instability 木槿(Hibiscus cannabinus L.)育种品系的细胞遗传学比较揭示了染色体的变异性和不稳定性
IF 2 3区 农林科学
Genetic Resources and Crop Evolution Pub Date : 2024-09-12 DOI: 10.1007/s10722-024-02176-z
Nii-Ayi Ankrah, Abdullah El-nagish, Sarah Breitenbach, Antonia Y. Tetteh, Tony Heitkam
{"title":"Comparative cytogenetics of kenaf (Hibiscus cannabinus L.) breeding lines reveal chromosomal variability and instability","authors":"Nii-Ayi Ankrah, Abdullah El-nagish, Sarah Breitenbach, Antonia Y. Tetteh, Tony Heitkam","doi":"10.1007/s10722-024-02176-z","DOIUrl":"https://doi.org/10.1007/s10722-024-02176-z","url":null,"abstract":"<p>Kenaf (<i>Hibiscus cannabinus</i>), a native warm-seasonal crop in Africa, is being considered for genetic improvement for local bast fiber production. To expedite its genetic improvement through breeding, kenaf genotypes from Ghana were assessed for genomic diversity regarding their chromosomal composition and ploidy levels. To gain insight into the repetitive DNA fractions in kenaf, the organization of 5S and 35S rRNA genes, as well as telomeric signal patterns were studied by a molecular cytogenetic approach. Using multi-color fluorescent in situ hybridization, distinct rDNA loci and <i>Arabidopsis</i>-like telomere signal patterns were revealed. The 5S rRNA genes were conserved in kenaf and localized in interstitial regions of two chromosomes across all accessions. The 35S rRNA genes were variable across the kenaf accessions and localized at sub-terminal ends and rarely interstitially in eight or six chromosome arms. Telomeric signals were observed at terminal ends of all chromosomes and the chromosome configuration of Ghana kenaf accessions were each confirmed to be 2n = 2x = 36. Observed genomic instability in kenaf is discussed. This report provides cytogenetic insights into the genome organization of kenaf and variability of its breeding lines. Additionally, this study sets the basis for further research to analyze the repetitive DNA sequences and develop reference karyotypes to reveal genetic and evolutionary relationships between cultivated and wild <i>Hibiscus</i> species.</p>","PeriodicalId":12467,"journal":{"name":"Genetic Resources and Crop Evolution","volume":"10 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142178631","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterization of the floral traits, pollen micromorphology and DNA barcoding of the edible flowers from three basil taxa (Lamiaceae) 三个罗勒类群(唇形科)可食用花朵的花朵特征、花粉微形态学和 DNA 条形码的鉴定
IF 2 3区 农林科学
Genetic Resources and Crop Evolution Pub Date : 2024-09-12 DOI: 10.1007/s10722-024-02170-5
Miriam Bazzicalupo, Federica Betuzzi, Jessica Frigerio, Werther Guidi Nissim, Fabio Rapallo, Barbara Ruffoni, Laura Cornara, Andrea Copetta
{"title":"Characterization of the floral traits, pollen micromorphology and DNA barcoding of the edible flowers from three basil taxa (Lamiaceae)","authors":"Miriam Bazzicalupo, Federica Betuzzi, Jessica Frigerio, Werther Guidi Nissim, Fabio Rapallo, Barbara Ruffoni, Laura Cornara, Andrea Copetta","doi":"10.1007/s10722-024-02170-5","DOIUrl":"https://doi.org/10.1007/s10722-024-02170-5","url":null,"abstract":"<p>The edible flowers sector is expanding due to the popularity and uses in culinary recipes of different species. In particular, flowers of <i>Ocimum basilicum</i> L. and related taxa are increasingly used for their aromas and nutritional value. However, there is limited information regarding their morphological characteristics and molecular profiles, which are both important to perform a quality control of food, and to avoid contaminations. Hence, our aim was the study of three basil taxa (<i>O. basilicum</i> ‘Cinnamon’, <i>O. basilicum</i> ‘Blue Spice’, and the hybrid <i>O.</i> × <i>africanum</i> Lour.) to obtain data useful for taxa identification and to understand which traits could be linked to their chemodiversity. The plants were grown in a greenhouse starting from seeds. Flowers were collected at anthesis; the morphology of calyxes, corolla and pollen grains was characterized; DNA barcoding analyses were performed. All taxa were identified only as <i>O. basilicum</i> by molecular analyses, but two haplotypes were distinguishable. All taxa were identifiable due to the presence/absence of specific glandular trichomes, and by pollen size and number of colpi. ‘Cinnamon’ and <i>O.</i> × <i>africanum</i> showed more morphological affinities to each other, but histochemical analyses suggested the separation of the three taxa. Pollen grains from ‘Cinnamon’ had the smallest diameter in polar view and were hexacolpate, while ‘Blue Spice’ pollen showed the highest diameter with grains being hexacolpate/octacolpate, similarly to <i>O.</i> × <i>africanum</i>. Our interdisciplinary study provides the first information for authenticating these basil cultivars in packaged products for human consumption.</p>","PeriodicalId":12467,"journal":{"name":"Genetic Resources and Crop Evolution","volume":"14 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142178626","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exploration and morphological characterization of local yams from the Tanimbar Islands, Maluku, Indonesia 印度尼西亚马鲁古塔宁巴尔群岛当地山药的勘探和形态特征描述
IF 2 3区 农林科学
Genetic Resources and Crop Evolution Pub Date : 2024-09-12 DOI: 10.1007/s10722-024-02150-9
Marietje Pesireron, Rein Estefanus Senewe, Asri Subkhan Mahulette, Jajuk Aneka Beti, Felly Philipus Senewe, Helper Sahat P. Manalu, Alberth Soplanit, Fanny Henry Tondo, Sheny. S. Kaihatu, Edwen D. Waas, Christoffol Leiwakabessy
{"title":"Exploration and morphological characterization of local yams from the Tanimbar Islands, Maluku, Indonesia","authors":"Marietje Pesireron, Rein Estefanus Senewe, Asri Subkhan Mahulette, Jajuk Aneka Beti, Felly Philipus Senewe, Helper Sahat P. Manalu, Alberth Soplanit, Fanny Henry Tondo, Sheny. S. Kaihatu, Edwen D. Waas, Christoffol Leiwakabessy","doi":"10.1007/s10722-024-02150-9","DOIUrl":"https://doi.org/10.1007/s10722-024-02150-9","url":null,"abstract":"<p>The Tanimbar Islands in Maluku Province, Indonesia, are a significant distribution center for <i>Dioscorea alata L</i>. However, exploration and morphological characterization of this species remain limited. This study aimed to (1) identify and analyze the morphological characteristics of local <i>D. alata</i> from the Tanimbar Islands and (2) determine the distinguishing characteristics for each <i>D. alata</i> accession observed. The exploration of <i>D. alata</i> was followed by ex-situ cultivation. Morphological characterization was conducted on 15 accessions using 16 morphological traits based on the International Board for Plant Genetic Resources (1997) descriptors. Hierarchical Cluster Analysis (HCA) revealed two primary groups with a dissimilarity coefficient of 33%. Group one consisted of the DA-01 and DA-02 accessions, while all other accessions formed group two. Notably, accession DA-11 within group two displayed a 26% difference in morphological traits compared to other group members. Principal Component Analysis (PCA) identified 21 significant characteristics that contributed to 42.9% of the total diversity. Accession DA-01 exhibited unique characteristics such as tuber cracking, while DA-02 stood out for stem diameter and leaf width. Additionally, DA-13 displayed unique root positions on the tuber surface, DA-14 exhibited distinctive leaf apex coloration, and DA-15 showed a unique inner tuber skin color. This study underscores the morphological diversity of <i>D. alata</i> in the Tanimbar Islands, providing valuable insights into its genetic resources.</p>","PeriodicalId":12467,"journal":{"name":"Genetic Resources and Crop Evolution","volume":"130 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142178629","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Analysis of the population genetics and the ecological characteristics of the endangered narrow endemic Soda grandis (Freitag, Vural & N. Adıgüzel) Akhani from Türkiye 分析图尔基耶濒危狭长地带特有物种 Soda grandis (Freitag, Vural & N. Adıgüzel) Akhani 的种群遗传学和生态特征
IF 2 3区 农林科学
Genetic Resources and Crop Evolution Pub Date : 2024-09-12 DOI: 10.1007/s10722-024-02172-3
Merve Yıldırım, Gül Nilhan Tuğ, Ahmet Emre Yaprak
{"title":"Analysis of the population genetics and the ecological characteristics of the endangered narrow endemic Soda grandis (Freitag, Vural & N. Adıgüzel) Akhani from Türkiye","authors":"Merve Yıldırım, Gül Nilhan Tuğ, Ahmet Emre Yaprak","doi":"10.1007/s10722-024-02172-3","DOIUrl":"https://doi.org/10.1007/s10722-024-02172-3","url":null,"abstract":"<p><i>Soda grandis</i> (Freitag, Vural &amp; N. Adıgüzel) Akhani, from the Amaranthaceae family, is a halophyte plant with significant promise and genetic potential in agriculture, especially as a source of genes. It is narrowly distributed only in gypsum and marly soils and a critically endangered annual species endemic to Türkiye. The level and pattern of genetic diversity in 92 individuals from four natural populations of the species were investigated using inter-simple sequence repeat (ISSR) markers. Physical and chemical analyses of soil samples and bioclimatic data of the study areas were conducted. At the species level, the percentage of polymorphic bands was 22.5%. Nei’s gene diversity was 0.085, and Shannon’s information index was 0.126. At populations level, the percentage of polymorphic bands = 2.12%, Nei’s gene diversity = 0.007, and Shannon’s information index = 0.011. The genetic differentiation coefficient indicated that the majority of the total genetic variability occurred among populations (91.9%). Analysis of molecular variance (AMOVA) revealed that 93% of the genetic variance was attributable to differences among populations, while the remaining 7% occurred within populations. The gene flow was very low (Nm = 0.044). The Mantel test revealed a significant, positive, and weak correlation between genetic and geographic distance (r = 0.296, p &lt; 0.001). The dendrograms were created using the Unweighted Pair Group Method with Arithmetic Mean (UPGMA), and the results were supported through Principal Coordinate Analyses (PCoA). STRUCTURE analysis indicated three distinct genetic groups (ΔK = 3). Given the high genetic differentiation among populations, it is crucial to evaluate sub-speciation and implement in situ conservation efforts.</p>","PeriodicalId":12467,"journal":{"name":"Genetic Resources and Crop Evolution","volume":"11 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142178628","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
First report of ultra-sculpturing and taxonomic implications of seed morphology of selected genus Euphorbia L 首次报告大戟科大戟属植物种子超微雕刻及其分类学意义
IF 2 3区 农林科学
Genetic Resources and Crop Evolution Pub Date : 2024-09-12 DOI: 10.1007/s10722-024-02167-0
Hussain Shah, Mushtaq Ahmad, Muhammad Zafar, Ateef Ullah, Shabir Ahmad, Mona S. Alwahibi, Okezie Emmanuel, Mohamed S. Elshikh
{"title":"First report of ultra-sculpturing and taxonomic implications of seed morphology of selected genus Euphorbia L","authors":"Hussain Shah, Mushtaq Ahmad, Muhammad Zafar, Ateef Ullah, Shabir Ahmad, Mona S. Alwahibi, Okezie Emmanuel, Mohamed S. Elshikh","doi":"10.1007/s10722-024-02167-0","DOIUrl":"https://doi.org/10.1007/s10722-024-02167-0","url":null,"abstract":"<p>The genus <i>Euphorbia</i> L. characterizes a diverse and ubiquitous range of flowering plants across numerous habitats worldwide. The study aimed to resolve the taxonomic significance of seed morphology across 31 species within <i>Euphorbia</i> L. Qualitative and quantitative micro and macromorphological characteristics of seeds and caruncles were studied using both stereomicroscopy and scanning electron microscopy. The results of the study showed variation in seed characteristics such as size, shape, color, surfaces, and caruncle characteristics. These characteristics are often constant and useful in identification and classification in <i>Euphorbia</i> species. Seed surfaces represented variation from reticulate, gemmate, clavate, psilate, foveolate, verrucate, chinate, reticulate, baculate, scabrate, and striate among studied taxa. Additionally, rugose, reticulate, verrucose, acute, and scabrate surfaces were investigated in caruncle of studied taxa. Moreover, some taxa are caruncle free. The morphometric variation of the seeds among the studied taxa was analyzed using the unweighted pair group method with arithmetic mean (UPGMA) and principal component (PCA) analyses. The dendrogram and plot results from the cluster and PCA analyses showed that <i>Euphorbia</i> taxa were grouped into two major clusters. Stereo and Scanning electron micrographs are provided for all known studied taxa.</p>","PeriodicalId":12467,"journal":{"name":"Genetic Resources and Crop Evolution","volume":"20 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142178630","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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