Frontiers in Computational Neuroscience最新文献

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Noise-induced synchrony of two-neuron motifs with asymmetric noise and uneven coupling 具有不对称噪声和不均匀耦合的双神经元图案的噪声诱导同步性
IF 3.2 4区 医学
Frontiers in Computational Neuroscience Pub Date : 2024-02-23 DOI: 10.3389/fncom.2024.1347748
Gurpreet Jagdev, Na Yu
{"title":"Noise-induced synchrony of two-neuron motifs with asymmetric noise and uneven coupling","authors":"Gurpreet Jagdev, Na Yu","doi":"10.3389/fncom.2024.1347748","DOIUrl":"https://doi.org/10.3389/fncom.2024.1347748","url":null,"abstract":"Synchronous dynamics play a pivotal role in various cognitive processes. Previous studies extensively investigate noise-induced synchrony in coupled neural oscillators, with a focus on scenarios featuring uniform noise and equal coupling strengths between neurons. However, real-world or experimental settings frequently exhibit heterogeneity, including deviations from uniformity in coupling and noise patterns. This study investigates noise-induced synchrony in a pair of coupled excitable neurons operating in a heterogeneous environment, where both noise intensity and coupling strength can vary independently. Each neuron is an excitable oscillator, represented by the normal form of Hopf bifurcation (HB). In the absence of stimulus, these neurons remain quiescent but can be triggered by perturbations, such as noise. Typically, noise and coupling exert opposing influences on neural dynamics, with noise diminishing coherence and coupling promoting synchrony. Our results illustrate the ability of asymmetric noise to induce synchronization in such coupled neural oscillators, with synchronization becoming increasingly pronounced as the system approaches the excitation threshold (i.e., HB). Additionally, we find that uneven coupling strengths and noise asymmetries are factors that can promote in-phase synchrony. Notably, we identify an optimal synchronization state when the absolute difference in coupling strengths is maximized, regardless of the specific coupling strengths chosen. Furthermore, we establish a robust relationship between coupling asymmetry and the noise intensity required to maximize synchronization. Specifically, when one oscillator (receiver neuron) receives a strong input from the other oscillator (source neuron) and the source neuron receives significantly weaker or no input from the receiver neuron, synchrony is maximized when the noise applied to the receiver neuron is much weaker than that applied to the source neuron. These findings reveal the significant connection between uneven coupling and asymmetric noise in coupled neuronal oscillators, shedding light on the enhanced propensity for in-phase synchronization in two-neuron motifs with one-way connections compared to those with two-way connections. This research contributes to a deeper understanding of the functional roles of network motifs that may serve within neuronal dynamics.","PeriodicalId":12363,"journal":{"name":"Frontiers in Computational Neuroscience","volume":"41 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-02-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139948817","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Editorial: Bioinformatics for modern neuroscience. 社论:现代神经科学的生物信息学。
IF 3.2 4区 医学
Frontiers in Computational Neuroscience Pub Date : 2024-02-22 eCollection Date: 2024-01-01 DOI: 10.3389/fncom.2024.1385658
Georgios N Dimitrakopoulos, Mathieu Di Miceli
{"title":"Editorial: Bioinformatics for modern neuroscience.","authors":"Georgios N Dimitrakopoulos, Mathieu Di Miceli","doi":"10.3389/fncom.2024.1385658","DOIUrl":"https://doi.org/10.3389/fncom.2024.1385658","url":null,"abstract":"","PeriodicalId":12363,"journal":{"name":"Frontiers in Computational Neuroscience","volume":"18 ","pages":"1385658"},"PeriodicalIF":3.2,"publicationDate":"2024-02-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10917933/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140061744","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Artificial intelligence approaches for early detection of neurocognitive disorders among older adults 早期发现老年人神经认知障碍的人工智能方法
IF 3.2 4区 医学
Frontiers in Computational Neuroscience Pub Date : 2024-02-16 DOI: 10.3389/fncom.2024.1307305
Khalid AlHarkan, Nahid Sultana, Noura Al Mulhim, Assim AlAbdulqader, Noor Alsafwani, Marwah Barnawi, Khulud Alasqah, Anhar Bazuhair, Zainab Alhalwah, Dina Bokhamseen, Sumayh S Aljameel, Sultan Alamri, Yousef Alqurashi, Kholoud Alghamdi
{"title":"Artificial intelligence approaches for early detection of neurocognitive disorders among older adults","authors":"Khalid AlHarkan, Nahid Sultana, Noura Al Mulhim, Assim AlAbdulqader, Noor Alsafwani, Marwah Barnawi, Khulud Alasqah, Anhar Bazuhair, Zainab Alhalwah, Dina Bokhamseen, Sumayh S Aljameel, Sultan Alamri, Yousef Alqurashi, Kholoud Alghamdi","doi":"10.3389/fncom.2024.1307305","DOIUrl":"https://doi.org/10.3389/fncom.2024.1307305","url":null,"abstract":"IntroductionDementia is one of the major global health issues among the aging population, characterized clinically by a progressive decline in higher cognitive functions. This paper aims to apply various artificial intelligence (AI) approaches to detect patients with mild cognitive impairment (MCI) or dementia accurately.MethodsQuantitative research was conducted to address the objective of this study using randomly selected 343 Saudi patients. The Chi-square test was conducted to determine the association of the patient’s cognitive function with various features, including demographical and medical history. Two widely used AI algorithms, logistic regression and support vector machine (SVM), were used for detecting cognitive decline. This study also assessed patients’ cognitive function based on gender and developed the predicting models for males and females separately.ResultsFifty four percent of patients have normal cognitive function, 34% have MCI, and 12% have dementia. The prediction accuracies for all the developed models are greater than 71%, indicating good prediction capability. However, the developed SVM models performed the best, with an accuracy of 93.3% for all patients, 94.4% for males only, and 95.5% for females only. The top 10 significant predictors based on the developed SVM model are education, bedtime, taking pills for chronic pain, diabetes, stroke, gender, chronic pains, coronary artery diseases, and wake-up time.ConclusionThe results of this study emphasize the higher accuracy and reliability of the proposed methods in cognitive decline prediction that health practitioners can use for the early detection of dementia. This research can also stipulate substantial direction and supportive intuitions for scholars to enhance their understanding of crucial research, emerging trends, and new developments in future cognitive decline studies.","PeriodicalId":12363,"journal":{"name":"Frontiers in Computational Neuroscience","volume":"209 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-02-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139762938","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The connectivity degree controls the difficulty in reservoir design of random boolean networks 连通度控制着随机布尔网络水库设计的难度
IF 3.2 4区 医学
Frontiers in Computational Neuroscience Pub Date : 2024-02-16 DOI: 10.3389/fncom.2024.1348138
Emmanuel Calvet, Bertrand Reulet, Jean Rouat
{"title":"The connectivity degree controls the difficulty in reservoir design of random boolean networks","authors":"Emmanuel Calvet, Bertrand Reulet, Jean Rouat","doi":"10.3389/fncom.2024.1348138","DOIUrl":"https://doi.org/10.3389/fncom.2024.1348138","url":null,"abstract":"<p>Reservoir Computing (RC) is a paradigm in artificial intelligence where a recurrent neural network (RNN) is used to process temporal data, leveraging the inherent dynamical properties of the reservoir to perform complex computations. In the realm of RC, the excitatory-inhibitory balance <italic>b</italic> has been shown to be pivotal for driving the dynamics and performance of Echo State Networks (ESN) and, more recently, Random Boolean Network (RBN). However, the relationship between <italic>b</italic> and other parameters of the network is still poorly understood. This article explores how the interplay of the balance <italic>b</italic>, the connectivity degree <italic>K</italic> (i.e., the number of synapses per neuron) and the size of the network (i.e., the number of neurons <italic>N</italic>) influences the dynamics and performance (memory and prediction) of an RBN reservoir. Our findings reveal that <italic>K</italic> and <italic>b</italic> are strongly tied in optimal reservoirs. Reservoirs with high <italic>K</italic> have two optimal balances, one for globally inhibitory networks (<italic>b</italic> &lt; 0), and the other one for excitatory networks (<italic>b</italic> &gt; 0). Both show asymmetric performances about a zero balance. In contrast, for moderate <italic>K</italic>, the optimal value being <italic>K</italic> = 4, best reservoirs are obtained when excitation and inhibition almost, but not exactly, balance each other. For almost all <italic>K</italic>, the influence of the size is such that increasing <italic>N</italic> leads to better performance, even with very large values of <italic>N</italic>. Our investigation provides clear directions to generate optimal reservoirs or reservoirs with constraints on size or connectivity.</p>","PeriodicalId":12363,"journal":{"name":"Frontiers in Computational Neuroscience","volume":"20 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-02-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140125130","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Neurocomputational mechanisms underlying perception and sentience in the neocortex 新皮层感知和知觉的神经计算机制
IF 3.2 4区 医学
Frontiers in Computational Neuroscience Pub Date : 2024-02-14 DOI: 10.3389/fncom.2024.1335739
Andrew S. Johnson, William Winlow
{"title":"Neurocomputational mechanisms underlying perception and sentience in the neocortex","authors":"Andrew S. Johnson, William Winlow","doi":"10.3389/fncom.2024.1335739","DOIUrl":"https://doi.org/10.3389/fncom.2024.1335739","url":null,"abstract":"<p>The basis for computation in the brain is the quantum threshold of “soliton,” which accompanies the ion changes of the action potential, and the refractory membrane at convergences. Here, we provide a logical explanation from the action potential to a neuronal model of the coding and computation of the retina. We also explain how the visual cortex operates through quantum-phase processing. In the small-world network, parallel frequencies collide into definable patterns of distinct objects. Elsewhere, we have shown how many sensory cells are meanly sampled from a single neuron and that convergences of neurons are common. We also demonstrate, using the threshold and refractory period of a quantum-phase pulse, that action potentials diffract across a neural network due to the annulment of parallel collisions in the phase ternary computation (PTC). Thus, PTC applied to neuron convergences results in a collective mean sampled frequency and is the only mathematical solution within the constraints of the brain neural networks (BNN). In the retina and other sensory areas, we discuss how this information is initially coded and then understood in terms of network abstracts within the lateral geniculate nucleus (LGN) and visual cortex. First, by defining neural patterning within a neural network, and then in terms of contextual networks, we demonstrate that the output of frequencies from the visual cortex contains information amounting to abstract representations of objects in increasing detail. We show that nerve tracts from the LGN provide time synchronization to the neocortex (defined as the location of the combination of connections of the visual cortex, motor cortex, auditory cortex, etc.). The full image is therefore combined in the neocortex with other sensory modalities so that it receives information about the object from the eye and all the abstracts that make up the object. Spatial patterns in the visual cortex are formed from individual patterns illuminating the retina, and memory is encoded by reverberatory loops of computational action potentials (CAPs). We demonstrate that a similar process of PTC may take place in the cochlea and associated ganglia, as well as ascending information from the spinal cord, and that this function should be considered universal where convergences of neurons occur.</p>","PeriodicalId":12363,"journal":{"name":"Frontiers in Computational Neuroscience","volume":"105 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-02-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140034450","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Colorectal image analysis for polyp diagnosis 用于息肉诊断的大肠图像分析
IF 3.2 4区 医学
Frontiers in Computational Neuroscience Pub Date : 2024-02-09 DOI: 10.3389/fncom.2024.1356447
Peng-Cheng Zhu, Jing-Jing Wan, Wei Shao, Xian-Chun Meng, Bo-Lun Chen
{"title":"Colorectal image analysis for polyp diagnosis","authors":"Peng-Cheng Zhu, Jing-Jing Wan, Wei Shao, Xian-Chun Meng, Bo-Lun Chen","doi":"10.3389/fncom.2024.1356447","DOIUrl":"https://doi.org/10.3389/fncom.2024.1356447","url":null,"abstract":"Colorectal polyp is an important early manifestation of colorectal cancer, which is significant for the prevention of colorectal cancer. Despite timely detection and manual intervention of colorectal polyps can reduce their chances of becoming cancerous, most existing methods ignore the uncertainties and location problems of polyps, causing a degradation in detection performance. To address these problems, in this paper, we propose a novel colorectal image analysis method for polyp diagnosis via PAM-Net. Specifically, a parallel attention module is designed to enhance the analysis of colorectal polyp images for improving the certainties of polyps. In addition, our method introduces the GWD loss to enhance the accuracy of polyp diagnosis from the perspective of polyp location. Extensive experimental results demonstrate the effectiveness of the proposed method compared with the SOTA baselines. This study enhances the performance of polyp detection accuracy and contributes to polyp detection in clinical medicine.","PeriodicalId":12363,"journal":{"name":"Frontiers in Computational Neuroscience","volume":"12 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139762641","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dynamics of antiphase bursting modulated by the inhibitory synaptic and hyperpolarization-activated cation currents 抑制性突触和超极化激活阳离子电流调制的反相猝发动力学
IF 3.2 4区 医学
Frontiers in Computational Neuroscience Pub Date : 2024-02-09 DOI: 10.3389/fncom.2024.1303925
Linan Guan, Huaguang Gu, Xinjing Zhang
{"title":"Dynamics of antiphase bursting modulated by the inhibitory synaptic and hyperpolarization-activated cation currents","authors":"Linan Guan, Huaguang Gu, Xinjing Zhang","doi":"10.3389/fncom.2024.1303925","DOIUrl":"https://doi.org/10.3389/fncom.2024.1303925","url":null,"abstract":"Antiphase bursting related to the rhythmic motor behavior exhibits complex dynamics modulated by the inhibitory synaptic current (<jats:italic>I</jats:italic><jats:sub>syn</jats:sub>), especially in the presence of the hyperpolarization-activated cation current (<jats:italic>I</jats:italic><jats:sub>h</jats:sub>). In the present paper, the dynamics of antiphase bursting modulated by the <jats:italic>I</jats:italic><jats:sub>h</jats:sub> and <jats:italic>I</jats:italic><jats:sub>syn</jats:sub> is studied in three aspects with a theoretical model. Firstly, the <jats:italic>I</jats:italic><jats:sub>syn</jats:sub> and the slow <jats:italic>I</jats:italic><jats:sub>h</jats:sub> with strong strength are the identified to be the necessary conditions for the antiphase bursting. The dependence of the antiphase bursting on the two currents is different for low (escape mode) and high (release mode) threshold voltages (<jats:italic>V</jats:italic><jats:sub>th</jats:sub>) of the inhibitory synapse. Secondly, more detailed co-regulations of the two currents to induce opposite changes of the bursting period are obtained. For the escape mode, increase of the <jats:italic>I</jats:italic><jats:sub>h</jats:sub> induces elevated membrane potential of the silence inhibited by a strong <jats:italic>I</jats:italic><jats:sub>syn</jats:sub> and shortened silence duration to go beyond <jats:italic>V</jats:italic><jats:sub>th</jats:sub>, resulting in reduced bursting period. For the release mode, increase of the <jats:italic>I</jats:italic><jats:sub>h</jats:sub> induces elevated tough value of the former part of the burst modulated by a nearly zero <jats:italic>I</jats:italic><jats:sub>syn</jats:sub> and lengthen burst duration to fall below <jats:italic>V</jats:italic><jats:sub>th</jats:sub>, resulting in prolonged bursting period. Finally, the fast-slow dynamics of the antiphase bursting are acquired. Using one-and two-parameter bifurcations of the fast subsystem of a single neuron, the burst of the antiphase bursting is related to the stable limit cycle, and the silence modulated by a strong <jats:italic>I</jats:italic><jats:sub>syn</jats:sub> to the stable equilibrium to a certain extent. The <jats:italic>I</jats:italic><jats:sub>h</jats:sub> mainly modulates the dynamics within the burst and quiescent state. Furthermore, with the fast subsystem of the coupled neurons, the silence is associated with the unstable equilibrium point. The results present theoretical explanations to the changes in the bursting period and fast-slow dynamics of the antiphase bursting modulated by the <jats:italic>I</jats:italic><jats:sub>syn</jats:sub> and <jats:italic>I</jats:italic><jats:sub>h</jats:sub>, which is helpful for understanding the antiphase bursting and modulating rhythmic motor patterns.","PeriodicalId":12363,"journal":{"name":"Frontiers in Computational Neuroscience","volume":"38 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139762639","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
An exploratory computational analysis in mice brain networks of widespread epileptic seizure onset locations along with potential strategies for effective intervention and propagation control 对小鼠大脑网络中广泛的癫痫发作位置进行探索性计算分析,以及有效干预和传播控制的潜在策略
IF 3.2 4区 医学
Frontiers in Computational Neuroscience Pub Date : 2024-02-08 DOI: 10.3389/fncom.2024.1360009
Juliette Courson, Mathias Quoy, Yulia Timofeeva, Thanos Manos
{"title":"An exploratory computational analysis in mice brain networks of widespread epileptic seizure onset locations along with potential strategies for effective intervention and propagation control","authors":"Juliette Courson, Mathias Quoy, Yulia Timofeeva, Thanos Manos","doi":"10.3389/fncom.2024.1360009","DOIUrl":"https://doi.org/10.3389/fncom.2024.1360009","url":null,"abstract":"<p>Mean-field models have been developed to replicate key features of epileptic seizure dynamics. However, the precise mechanisms and the role of the brain area responsible for seizure onset and propagation remain incompletely understood. In this study, we employ computational methods within The Virtual Brain framework and the Epileptor model to explore how the location and connectivity of an Epileptogenic Zone (EZ) in a mouse brain are related to focal seizures (seizures that start in one brain area and may or may not remain localized), with a specific focus on the hippocampal region known for its association with epileptic seizures. We then devise computational strategies to confine seizures (prevent widespread propagation), simulating medical-like treatments such as tissue resection and the application of an anti-seizure drugs or neurostimulation to suppress hyperexcitability. Through selectively removing (blocking) specific connections informed by the structural connectome and graph network measurements or by locally reducing outgoing connection weights of EZ areas, we demonstrate that seizures can be kept constrained around the EZ region. We successfully identified the minimal connections necessary to prevent widespread seizures, with a particular focus on minimizing surgical or medical intervention while simultaneously preserving the original structural connectivity and maximizing brain functionality.</p>","PeriodicalId":12363,"journal":{"name":"Frontiers in Computational Neuroscience","volume":"41 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-02-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139968931","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Developing a hippocampal neural prosthetic to facilitate human memory encoding and recall of stimulus features and categories 开发海马神经假体,促进人类对刺激特征和类别的记忆编码和回忆
IF 3.2 4区 医学
Frontiers in Computational Neuroscience Pub Date : 2024-02-08 DOI: 10.3389/fncom.2024.1263311
Brent M. Roeder, Xiwei She, Alexander S. Dakos, Bryan Moore, Robert T. Wicks, Mark R. Witcher, Daniel E. Couture, Adrian W. Laxton, Heidi Munger Clary, Gautam Popli, Charles Liu, Brian Lee, Christianne Heck, George Nune, Hui Gong, Susan Shaw, Vasilis Z. Marmarelis, Theodore W. Berger, Sam A. Deadwyler, Dong Song, Robert E. Hampson
{"title":"Developing a hippocampal neural prosthetic to facilitate human memory encoding and recall of stimulus features and categories","authors":"Brent M. Roeder, Xiwei She, Alexander S. Dakos, Bryan Moore, Robert T. Wicks, Mark R. Witcher, Daniel E. Couture, Adrian W. Laxton, Heidi Munger Clary, Gautam Popli, Charles Liu, Brian Lee, Christianne Heck, George Nune, Hui Gong, Susan Shaw, Vasilis Z. Marmarelis, Theodore W. Berger, Sam A. Deadwyler, Dong Song, Robert E. Hampson","doi":"10.3389/fncom.2024.1263311","DOIUrl":"https://doi.org/10.3389/fncom.2024.1263311","url":null,"abstract":"ObjectiveHere, we demonstrate the first successful use of static neural stimulation patterns for specific information content. These static patterns were derived by a model that was applied to a subject’s own hippocampal spatiotemporal neural codes for memory.ApproachWe constructed a new model of processes by which the hippocampus encodes specific memory items via spatiotemporal firing of neural ensembles that underlie the successful encoding of targeted content into short-term memory. A memory decoding model (MDM) of hippocampal CA3 and CA1 neural firing was computed which derives a stimulation pattern for CA1 and CA3 neurons to be applied during the encoding (sample) phase of a delayed match-to-sample (DMS) human short-term memory task.Main resultsMDM electrical stimulation delivered to the CA1 and CA3 locations in the hippocampus during the sample phase of DMS trials facilitated memory of images from the DMS task during a delayed recognition (DR) task that also included control images that were not from the DMS task. Across all subjects, the stimulated trials exhibited significant changes in performance in 22.4% of patient and category combinations. Changes in performance were a combination of both increased memory performance and decreased memory performance, with increases in performance occurring at almost 2 to 1 relative to decreases in performance. Across patients with impaired memory that received bilateral stimulation, significant changes in over 37.9% of patient and category combinations was seen with the changes in memory performance show a ratio of increased to decreased performance of over 4 to 1. Modification of memory performance was dependent on whether memory function was intact or impaired, and if stimulation was applied bilaterally or unilaterally, with nearly all increase in performance seen in subjects with impaired memory receiving bilateral stimulation.SignificanceThese results demonstrate that memory encoding in patients with impaired memory function can be facilitated for specific memory content, which offers a stimulation method for a future implantable neural prosthetic to improve human memory.","PeriodicalId":12363,"journal":{"name":"Frontiers in Computational Neuroscience","volume":"20 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-02-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139762637","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Random forest analysis of midbrain hypometabolism using [18F]-FDG PET identifies Parkinson's disease at the subject-level 利用[18F]-FDG PET对中脑代谢低下进行随机森林分析,在受试者层面识别帕金森病
IF 3.2 4区 医学
Frontiers in Computational Neuroscience Pub Date : 2024-02-07 DOI: 10.3389/fncom.2024.1328699
Marina C. Ruppert-Junck, Gunter Kräling, Andrea Greuel, Marc Tittgemeyer, Lars Timmermann, Alexander Drzezga, Carsten Eggers, David Pedrosa
{"title":"Random forest analysis of midbrain hypometabolism using [18F]-FDG PET identifies Parkinson's disease at the subject-level","authors":"Marina C. Ruppert-Junck, Gunter Kräling, Andrea Greuel, Marc Tittgemeyer, Lars Timmermann, Alexander Drzezga, Carsten Eggers, David Pedrosa","doi":"10.3389/fncom.2024.1328699","DOIUrl":"https://doi.org/10.3389/fncom.2024.1328699","url":null,"abstract":"Parkinson's disease (PD) is currently diagnosed largely on the basis of expert judgement with neuroimaging serving only as a supportive tool. In a recent study, we identified a hypometabolic midbrain cluster, which includes parts of the substantia nigra, as the best differentiating metabolic feature for PD-patients based on group comparison of [<jats:sup>18</jats:sup>F]-fluorodeoxyglucose ([<jats:sup>18</jats:sup>F]-FDG) PET scans. Longitudinal analyses confirmed progressive metabolic changes in this region and, an independent study showed great potential of nigral metabolism for diagnostic workup of parkinsonian syndromes. In this study, we applied a machine learning approach to evaluate midbrain metabolism measured by [<jats:sup>18</jats:sup>F]-FDG PET as a diagnostic marker for PD. In total, 51 mid-stage PD-patients and 16 healthy control subjects underwent high-resolution [<jats:sup>18</jats:sup>F]-FDG PET. Normalized tracer update values of the midbrain cluster identified by between-group comparison were extracted voxel-wise from individuals' scans. Extracted uptake values were subjected to a random forest feature classification algorithm. An adapted leave-one-out cross validation approach was applied for testing robustness of the model for differentiating between patients and controls. Performance of the model across all runs was evaluated by calculating sensitivity, specificity and model accuracy for the validation data set and the percentage of correctly categorized subjects for test data sets. The random forest feature classification of voxel-based uptake values from the midbrain cluster identified patients in the validation data set with an average sensitivity of 0.91 (Min: 0.82, Max: 0.94). For all 67 runs, in which each of the individuals was treated once as test data set, the test data set was correctly categorized by our model. The applied feature importance extraction consistently identified a subset of voxels within the midbrain cluster with highest importance across all runs which spatially converged with the left substantia nigra. Our data suggest midbrain metabolism measured by [<jats:sup>18</jats:sup>F]-FDG PET as a promising diagnostic imaging tool for PD. Given its close relationship to PD pathophysiology and very high discriminatory accuracy, this approach could help to objectify PD diagnosis and enable more accurate classification in relation to clinical trials, which could also be applicable to patients with prodromal disease.","PeriodicalId":12363,"journal":{"name":"Frontiers in Computational Neuroscience","volume":"100 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139762640","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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