Emilie Fréalle , Christophe Noël , Eric Viscogliosi , Daniel Camus , Eduardo Dei-Cas , Laurence Delhaes
{"title":"Manganese superoxide dismutase in pathogenic fungi: An issue with pathophysiological and phylogenetic involvements","authors":"Emilie Fréalle , Christophe Noël , Eric Viscogliosi , Daniel Camus , Eduardo Dei-Cas , Laurence Delhaes","doi":"10.1016/j.femsim.2005.06.003","DOIUrl":"10.1016/j.femsim.2005.06.003","url":null,"abstract":"<div><p><span>Manganese-containing superoxide dismutases (MnSODs) are ubiquitous metalloenzymes involved in cell defence against endogenous and exogenous reactive oxygen species. In fungi, using this essential enzyme for phylogenetic analysis of </span><span><em>Pneumocystis</em></span> and <span><em>Ganoderma</em></span><span> genera, and of species selected among Ascomycota<span>, Basidiomycota and Zygomycota, provided interesting results in taxonomy and evolution. The role of mitochondrial and cytosolic MnSODs was explored in some pathogenic Basidiomycota yeasts (</span></span><span><em>Cryptococcus neoformans</em></span> var. <em>grubii</em>, <em>Cryptococcus neoformans</em> var. <em>gattii</em>, <span><em>Malassezia sympodialis</em></span><span>), Ascomycota filamentous fungi (</span><span><em>Aspergillus fumigatus</em></span>), and Ascomycota yeasts (<span><em>Candida albicans</em></span>). MnSOD-based phylogenetic and pathogenic data are confronted in order to evaluate the roles of fungal MnSODs in pathophysiological mechanisms.</p></div>","PeriodicalId":12220,"journal":{"name":"FEMS immunology and medical microbiology","volume":"45 3","pages":"Pages 411-422"},"PeriodicalIF":0.0,"publicationDate":"2005-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.femsim.2005.06.003","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25220354","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Analysis and expression of STE13ca gene encoding a putative X-prolyl dipeptidyl aminopeptidase from Candida albicans","authors":"Consuelo Bautista-Muñoz, César Hernández-Rodrı́guez, Lourdes Villa-Tanaca","doi":"10.1016/j.femsim.2005.05.020","DOIUrl":"10.1016/j.femsim.2005.05.020","url":null,"abstract":"<div><p><span><em>Candida albicans</em><em> STE13ca</em></span> gene was identified by its homology to the <span><em>Saccharomyces cerevisiae</em><em> STE13</em></span><span> gene that encodes for the dipeptidyl aminopeptidase A (DAP A) involved in the maturation of α-factor mating pheromone. Our study revealed that </span><em>C. albicans</em> ATCC 10231 depicts dipeptidyl aminopeptidase activity. We also analyzed the expression of the <em>STE13ca</em> gene homologue from this pathogenic yeast. This gene of 2793<!--> <!-->pb is homozygotic and encodes for a predicted protein of 930 amino acids with a molecular weight of 107,035<!--> <!-->Da. The predicted protein displays significant sequence similarity to <em>S. cerevisiae</em> Ste13p. This <em>C. albicans</em> gene is located in chromosome R. <em>STE13ca</em> gene increases its levels of expression in conditions of nutritional stress (proline as nitrogen source) and during formation of the germinal tube, suggesting a basic biological function for the <em>STE13ca</em> in this yeast.</p></div>","PeriodicalId":12220,"journal":{"name":"FEMS immunology and medical microbiology","volume":"45 3","pages":"Pages 459-469"},"PeriodicalIF":0.0,"publicationDate":"2005-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.femsim.2005.05.020","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25222152","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Cryptococcus neoformans: A sugar-coated killer with designer genes","authors":"John R. Perfect","doi":"10.1016/j.femsim.2005.06.005","DOIUrl":"10.1016/j.femsim.2005.06.005","url":null,"abstract":"<div><p><span><em>Cryptococcus neoformans</em></span><span><span> has become a common central nervous system pathogen as the immunocompromised populations enlarge world-wide. This encapsulated yeast has significant advantages for the study of fungal pathogenesis and these include: (1) a clinically important </span>human pathogen<span><span>; (2) a tractable genetic system; (3) advanced molecular biology foundation; (4) understanding of several virulence phenotypes; (5) well-studied pathophysiology; and (6) robust animal models. With the use of a </span>sequenced genome and site-directed mutagenesis to produce specific null mutants, the virulence composite of </span></span><em>C. neoformans</em><span> has begun to be identified one gene at a time. Studies into capsule production, melanin synthesis<span><span>, high temperature growth, metabolic pathways and a variety of signaling pathways have led to understandings of what makes this yeast a pathogen at the molecular level. Multiple principles of </span>molecular pathogenesis have been demonstrated in virulence studies with </span></span><em>C. neoformans</em>. These include evolutionary differences between the varieties of <em>C. neoformans</em><span> in their genes for virulence, quantitative impact of genes on the virulence composite, species and site-specific importance of a virulence gene, gene expression correlation with its functional importance or phenotype and the impact of a pathogenesis gene on the host immune response. </span><em>C. neoformans</em> has now become a primary model to study molecular fungal pathogenesis with the goal of identifying drug targets or vaccine strategies.</p></div>","PeriodicalId":12220,"journal":{"name":"FEMS immunology and medical microbiology","volume":"45 3","pages":"Pages 395-404"},"PeriodicalIF":0.0,"publicationDate":"2005-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.femsim.2005.06.005","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25222151","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Subject Index Volume 45","authors":"","doi":"10.1016/S0928-8244(05)00183-5","DOIUrl":"https://doi.org/10.1016/S0928-8244(05)00183-5","url":null,"abstract":"","PeriodicalId":12220,"journal":{"name":"FEMS immunology and medical microbiology","volume":"45 3","pages":"Pages 483-490"},"PeriodicalIF":0.0,"publicationDate":"2005-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S0928-8244(05)00183-5","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138419850","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Maria Sueli S. Felipe , Fernando A.G. Torres , Andrea Q. Maranhão , Ildinete Silva-Pereira , Marcio J. Poças-Fonseca , Elida G. Campos , Lídia M.P. Moraes , Fabrício B.M. Arraes , Maria José A. Carvalho , Rosângela V. Andrade , André M. Nicola , Marcus M. Teixeira , Rosália S.A. Jesuíno , Maristela Pereira , Célia M.A. Soares , Marcelo M. Brígido
{"title":"Functional genome of the human pathogenic fungus Paracoccidioides brasiliensis","authors":"Maria Sueli S. Felipe , Fernando A.G. Torres , Andrea Q. Maranhão , Ildinete Silva-Pereira , Marcio J. Poças-Fonseca , Elida G. Campos , Lídia M.P. Moraes , Fabrício B.M. Arraes , Maria José A. Carvalho , Rosângela V. Andrade , André M. Nicola , Marcus M. Teixeira , Rosália S.A. Jesuíno , Maristela Pereira , Célia M.A. Soares , Marcelo M. Brígido","doi":"10.1016/j.femsim.2005.05.013","DOIUrl":"10.1016/j.femsim.2005.05.013","url":null,"abstract":"<div><p><span><em>Paracoccidioides brasiliensis</em></span><span><span> is a dimorphic and thermo-regulated fungus which is the causative agent of paracoccidioidomycosis<span><span>, an endemic disease widespread in Latin America. Pathogenicity is assumed to be a consequence of the cellular differentiation process that this fungus undergoes from </span>mycelium to </span></span>yeast cells<span><span> during human infection. In an effort to elucidate the molecular mechanisms involved in this process a network of Brazilian laboratories carried out a transcriptome<span> project for both cell types. This review focuses on the data analysis yielding a comprehensive view of the fungal metabolism and the molecular adaptations during </span></span>dimorphism in </span></span><em>P. brasiliensis</em> from analysis of 6022 groups, related to expressed genes, which were generated from both mycelium and yeast phases.</p></div>","PeriodicalId":12220,"journal":{"name":"FEMS immunology and medical microbiology","volume":"45 3","pages":"Pages 369-381"},"PeriodicalIF":0.0,"publicationDate":"2005-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.femsim.2005.05.013","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25225742","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Towards a molecular diagnosis of invasive aspergillosis and disseminated candidosis","authors":"Stéphane Bretagne , Jean-Marc Costa","doi":"10.1016/j.femsim.2005.05.012","DOIUrl":"10.1016/j.femsim.2005.05.012","url":null,"abstract":"<div><p><span><span>A lot of in-house polymerase chain reaction assays have been reported for diagnosis of </span>invasive aspergillosis<span> and disseminated candidosis. Encouraging results have been published to anticipate the diagnosis over the conventional microbiological methods. However, the absence of standardized methods has led to diverging results. As a consequence, these tests are not recognized as consensual diagnostic criteria, in contrast with some antigenemia detection kits. The major breakthrough for improving the results of these methods is the emergence of real-time technologies. This markedly improves the reliability of the PCR results by dramatically decreasing the risk of false positive results due to PCR products carryover. Moreover, using the quantitative results provided by this technique, this allows to rapidly compare the efficiency of primers, probes, and </span></span>DNA extraction methods. Therefore, the hope is to identify the more specific and sensitive parameters to implement comparative studies. Automated DNA extraction should also be useful to achieve this goal.</p><p>Whatever sophisticated technology is used, we still have to define the meaning of detecting nucleic acids<span> in a given clinical sample. This seems simple in normally sterile anatomical sites but less obvious for example in respiratory specimens for invasive aspergillosis or in blood for candidosis in heavily colonized patients. Additional studies of the kinetics of fungal DNA are needed. The development of real-time technology should improve our knowledge in order to give the clinicians informative clues for making a decision.</span></p></div>","PeriodicalId":12220,"journal":{"name":"FEMS immunology and medical microbiology","volume":"45 3","pages":"Pages 361-368"},"PeriodicalIF":0.0,"publicationDate":"2005-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.femsim.2005.05.012","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25220846","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Blanca L. Arroyo-Flores, Carlos Calvo-Méndez, Arturo Flores-Carreón, Everardo López-Romero
{"title":"Biosynthesis of glycoproteins in the pathogenic fungus Candida albicans: Activation of dolichol phosphate mannose synthase by cAMP-mediated protein phosphorylation","authors":"Blanca L. Arroyo-Flores, Carlos Calvo-Méndez, Arturo Flores-Carreón, Everardo López-Romero","doi":"10.1016/j.femsim.2005.05.016","DOIUrl":"10.1016/j.femsim.2005.05.016","url":null,"abstract":"<div><p><span><span>Following incubation with ATP and a cAMP-dependent protein kinase<span> under optimal conditions of lipid acceptor, phospholipid<span> and metal ion requirements, the transfer activity of partially purified </span></span></span>dolichol phosphate mannose synthase (DPMS) increased about 60% and this activation correlated with a 50% increase in </span><em>V</em><sub>max</sub> with no alteration in the apparent <em>K</em><sub>m</sub> for GDP-Manose. Phosphorylation with [γ-<sup>32</sup><span>P]ATP resulted in the labeling of several polypeptides, one of which exhibited the molecular weight of the enzyme (30</span> <span><span>kDa) and was also recognized using a specific anti-DPMS monoclonal antibody. This and the fact that the phosphate label could be removed by an </span>alkaline phosphatase indicate that </span><em>Candida</em> DPMS may be regulated by phosphorylation–dephosphorylation, a mechanism that has been proposed for the enzyme in other organisms.</p></div>","PeriodicalId":12220,"journal":{"name":"FEMS immunology and medical microbiology","volume":"45 3","pages":"Pages 429-434"},"PeriodicalIF":0.0,"publicationDate":"2005-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.femsim.2005.05.016","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25222150","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Homology, disruption and phenotypic analysis of CaGS Candida albicans gene induced during macrophage infection","authors":"Marina Luongo , Amalia Porta , Bruno Maresca","doi":"10.1016/j.femsim.2005.06.007","DOIUrl":"10.1016/j.femsim.2005.06.007","url":null,"abstract":"<div><p>During macrophage infection <span><em>Candida albicans</em></span> expresses differentially several genes whose functions are associated with its survival strategy. Among others, we have isolated <em>CaGS</em> gene, which is homologous to <em>SNF3</em>, a glucose sensor of <span><em>Saccharomyces cerevisiae</em></span>. To elucidate its potential role during infection, <em>CaGS</em> has been disrupted and the resulting phenotype analyzed on different solid media. The null mutant lost the ability to form hyphae on a medium with low glucose concentration and serum. Furthermore, this mutant does not disrupt macrophage in in vitro infections. We believe that this putative glucose sensor is involved in hyphal development during macrophage infection.</p></div>","PeriodicalId":12220,"journal":{"name":"FEMS immunology and medical microbiology","volume":"45 3","pages":"Pages 471-478"},"PeriodicalIF":0.0,"publicationDate":"2005-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.femsim.2005.06.007","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25233597","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Maria Lucia Taylor , Catalina B. Chávez-Tapia , Alberto Rojas-Martínez , Maria del Rocio Reyes-Montes , Mirian Bobadilla del Valle , Gerardo Zúñiga
{"title":"Geographical distribution of genetic polymorphism of the pathogen Histoplasma capsulatum isolated from infected bats, captured in a central zone of Mexico","authors":"Maria Lucia Taylor , Catalina B. Chávez-Tapia , Alberto Rojas-Martínez , Maria del Rocio Reyes-Montes , Mirian Bobadilla del Valle , Gerardo Zúñiga","doi":"10.1016/j.femsim.2005.05.019","DOIUrl":"10.1016/j.femsim.2005.05.019","url":null,"abstract":"<div><p>Fourteen <span><em>Histoplasma capsulatum</em></span> isolates recovered from infected bats captured in Mexican caves and two human <em>H. capsulatum</em><span> reference strains were analyzed using random amplification of polymorphic DNA PCR-based and partial DNA sequences of four genes. Cluster analysis of random amplification of polymorphic DNA-patterns revealed differences for two </span><em>H. capsulatum</em> isolates of one migratory bat <em>Tadarida brasiliensis</em>. Three groups were identified by distance and maximum-parsimony analyses of <em>arf</em>, <em>H-anti</em>, <em>ole</em>, and <em>tub1 H. capsulatum</em> genes. Group I included most isolates from infected bats and one clinical strain from central Mexico; group II included the two isolates from <em>T. brasiliensis</em>; the human G-217B reference strain from USA formed an independent group III. Isolates from group II showed diversity in relation to groups I and III, suggesting a different <em>H. capsulatum</em> population.</p></div>","PeriodicalId":12220,"journal":{"name":"FEMS immunology and medical microbiology","volume":"45 3","pages":"Pages 451-458"},"PeriodicalIF":0.0,"publicationDate":"2005-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.femsim.2005.05.019","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25225738","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Author Index Volume 45","authors":"","doi":"10.1016/S0928-8244(05)00182-3","DOIUrl":"https://doi.org/10.1016/S0928-8244(05)00182-3","url":null,"abstract":"","PeriodicalId":12220,"journal":{"name":"FEMS immunology and medical microbiology","volume":"45 3","pages":"Pages 479-482"},"PeriodicalIF":0.0,"publicationDate":"2005-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S0928-8244(05)00182-3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138419849","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}