Current topics in microbiology and immunology最新文献_第8页

Plant Virus Adaptation to New Hosts: A Multi-scale Approach. 植物病毒对新寄主的适应:多尺度研究

3区医学

Current topics in microbiology and immunology Pub Date : 2023-01-01 DOI: 10.1007/978-3-031-15640-3_5

Santiago F Elena, Fernando García-Arenal

{"title":"Plant Virus Adaptation to New Hosts: A Multi-scale Approach.","authors":"Santiago F Elena, Fernando García-Arenal","doi":"10.1007/978-3-031-15640-3_5","DOIUrl":"https://doi.org/10.1007/978-3-031-15640-3_5","url":null,"abstract":"Viruses are studied at each level of biological complexity: from within-cells to ecosystems. The same basic evolutionary forces and principles operate at each level: mutation and recombination, selection, genetic drift, migration, and adaptive trade-offs. Great efforts have been put into understanding each level in great detail, hoping to predict the dynamics of viral population, prevent virus emergence, and manage their spread and virulence. Unfortunately, we are still far from this. To achieve these ambitious goals, we advocate for an integrative perspective of virus evolution. Focusing in plant viruses, we illustrate the pervasiveness of the above-mentioned principles. Beginning at the within-cell level, we describe replication modes, infection bottlenecks, and cellular contagion rates. Next, we move up to the colonization of distal tissues, discussing the fundamental role of random events. Then, we jump beyond the individual host and discuss the link between transmission mode and virulence. Finally, at the community level, we discuss properties of virus-plant infection networks. To close this review we propose the multilayer network theory, in which elements at different layers are connected and submit to their own dynamics that feed across layers, resulting in new emerging properties, as a way to integrate information from the different levels.","PeriodicalId":11102,"journal":{"name":"Current topics in microbiology and immunology","volume":"439 ","pages":"167-196"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10474578","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 3

Mitochondrial Function in Health and Disease: Responses to Helicobacter pylori Metabolism and Impact in Gastric Cancer Development. 健康与疾病中的线粒体功能：幽门螺杆菌代谢的反应及其对胃癌发展的影响

3区医学

Current topics in microbiology and immunology Pub Date : 2023-01-01 DOI: 10.1007/978-3-031-47331-9_3

Javier Torres, Eliette Touati

{"title":"Mitochondrial Function in Health and Disease: Responses to Helicobacter pylori Metabolism and Impact in Gastric Cancer Development.","authors":"Javier Torres, Eliette Touati","doi":"10.1007/978-3-031-47331-9_3","DOIUrl":"10.1007/978-3-031-47331-9_3","url":null,"abstract":"Mitochondria are major cellular organelles that play an essential role in metabolism, stress response, immunity, and cell fate. Mitochondria are organized in a network with other cellular compartments, functioning as a signaling hub to maintain cells' health. Mitochondrial dysfunctions and genome alterations are associated with diseases including cancer. Mitochondria are a preferential target for pathogens, which have developed various mechanisms to hijack cellular functions for their benefit. Helicobacter pylori is recognized as the major risk factor for gastric cancer development. H. pylori induces oxidative stress and chronic gastric inflammation associated with mitochondrial dysfunction. Its pro-apoptotic cytotoxin VacA interacts with the mitochondrial inner membrane, leading to increased permeability and decreased ATP production. Furthermore, H. pylori induces mitochondrial DNA damage and mutation, concomitant with the development of gastric intraepithelial neoplasia as observed in infected mice. In this chapter, we present diverse aspects of the role of mitochondria as energy supplier and signaling hubs and their adaptation to stress conditions. The metabolic activity of mitochondria is directly linked to biosynthetic pathways. While H. pylori virulence factors and derived metabolites are essential for gastric colonization and niche adaptation, they may also impact mitochondrial function and metabolism, and may have consequences in gastric pathogenesis. Importantly, during its long way to reach the gastric epithelium, H. pylori faces various cellular types along the gastric mucosa. We discuss how the mitochondrial response of these different cells is affected by H. pylori and impacts the colonization and bacterium niche adaptation and point to areas that remain to be investigated.","PeriodicalId":11102,"journal":{"name":"Current topics in microbiology and immunology","volume":"444 ","pages":"53-81"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139477826","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Simian Varicella Virus: Molecular Virology and Mechanisms of Pathogenesis. 猿猴水痘病毒:分子病毒学和发病机制。

3区医学

Current topics in microbiology and immunology Pub Date : 2023-01-01 DOI: 10.1007/82_2021_241

Allen Jankeel, Izabela Coimbra-Ibraim, Ilhem Messaoudi

引用次数: 0

Lassa Fever Natural History and Clinical Management. 拉沙热自然史及临床管理。

3区医学

Current topics in microbiology and immunology Pub Date : 2023-01-01 DOI: 10.1007/82_2023_263

Donald S Grant, Robert J Samuels, Robert F Garry, John S Schieffelin

{"title":"Lassa Fever Natural History and Clinical Management.","authors":"Donald S Grant, Robert J Samuels, Robert F Garry, John S Schieffelin","doi":"10.1007/82_2023_263","DOIUrl":"https://doi.org/10.1007/82_2023_263","url":null,"abstract":"Lassa fever is caused by Lassa virus (LASV), an Old World Mammarenavirus that is carried by Mastomys natalensis and other rodents. It is endemic in Sierra Leone, Nigeria, and other countries in West Africa. The clinical presentation of LASV infection is heterogenous varying from an inapparent or mild illness to a fatal hemorrhagic fever. Exposure to LASV is usually through contact with rodent excreta. After an incubation period of 1-3 weeks, initial symptoms such as fever, headache, and fatigue develop that may progress to sore throat, retrosternal chest pain, conjunctival injection, vomiting, diarrhea, and abdominal pain. Severe illness, including hypotension, shock, and multiorgan failure, develops in a minority of patients. Patient demographics and case fatality rates are distinctly different in Sierra Leone and Nigeria. Laboratory diagnosis relies on the detection of LASV antigens or genomic RNA. LASV-specific immunoglobulin G and M assays can also contribute to clinical management. The mainstay of treatment for Lassa fever is supportive care. The nucleoside analog ribavirin is commonly used to treat acute Lassa fever but is considered useful only if treatment is begun early in the disease course. Drugs in development, including a monoclonal antibody cocktail, have the potential to impact the management of Lassa fever.","PeriodicalId":11102,"journal":{"name":"Current topics in microbiology and immunology","volume":"440 ","pages":"165-192"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9827282","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Lassa Virus Structural Biology and Replication. 拉沙病毒结构生物学和复制。

3区医学

Current topics in microbiology and immunology Pub Date : 2023-01-01 DOI: 10.1007/82_2023_262

Robert F Garry

引用次数: 0

The Role of Extensive Recombination in the Evolution of Geminiviruses. 广泛重组在双病毒进化中的作用。

3区医学

Current topics in microbiology and immunology Pub Date : 2023-01-01 DOI: 10.1007/978-3-031-15640-3_4

Elvira Fiallo-Olivé, Jesús Navas-Castillo

{"title":"The Role of Extensive Recombination in the Evolution of Geminiviruses.","authors":"Elvira Fiallo-Olivé, Jesús Navas-Castillo","doi":"10.1007/978-3-031-15640-3_4","DOIUrl":"https://doi.org/10.1007/978-3-031-15640-3_4","url":null,"abstract":"Mutation, recombination and pseudo-recombination are the major forces driving the evolution of viruses by the generation of variants upon which natural selection, genetic drift and gene flow can act to shape the genetic structure of viral populations. Recombination between related virus genomes co-infecting the same cell usually occurs via template swapping during the replication process and produces a chimeric genome. The family Geminiviridae shows the highest evolutionary success among plant virus families, and the common presence of recombination signatures in their genomes reveals a key role in their evolution. This review describes the general characteristics of members of the family Geminiviridae and associated DNA satellites, as well as the extensive occurrence of recombination at all taxonomic levels, from strain to family. The review also presents an overview of the recombination patterns observed in nature that provide some clues regarding the mechanisms involved in the generation and emergence of recombinant genomes. Moreover, the results of experimental evolution studies that support some of the conclusions obtained in descriptive or in silico works are summarized. Finally, the review uses a number of case studies to illustrate those recombination events with evolutionary and pathological implications as well as recombination events in which DNA satellites are involved.","PeriodicalId":11102,"journal":{"name":"Current topics in microbiology and immunology","volume":"439 ","pages":"139-166"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10474577","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 1

Virus Evolution Faced to Multiple Host Targets: The Potyvirus-Pepper Case Study. 面对多宿主目标的病毒进化:Potyvirus-Pepper案例研究。

3区医学

Current topics in microbiology and immunology Pub Date : 2023-01-01 DOI: 10.1007/978-3-031-15640-3_3

Lucie Tamisier, Séverine Lacombe, Carole Caranta, Jean-Luc Gallois, Benoît Moury

{"title":"Virus Evolution Faced to Multiple Host Targets: The Potyvirus-Pepper Case Study.","authors":"Lucie Tamisier, Séverine Lacombe, Carole Caranta, Jean-Luc Gallois, Benoît Moury","doi":"10.1007/978-3-031-15640-3_3","DOIUrl":"https://doi.org/10.1007/978-3-031-15640-3_3","url":null,"abstract":"The wealth of variability amongst genes controlling immunity against potyviruses in pepper (Capsicum spp.) has been instrumental in understanding plant-virus co-evolution and major determinants of plant resistance durability. Characterization of the eukaryotic initiation factor 4E1 (eIF4E1), involved in mRNA translation, as the basis of potyvirus resistance in pepper initiated a large body of work that showed that recessive resistance to potyviruses and other single-stranded positive-sense RNA viruses resulted from mutations in eukaryotic initiation factors in many plant crop species. Combining mutations in different eIF4Es in the same pepper genotype had complex effects on the breadth of the resistance spectrum and on resistance durability, revealing a trade-off between these two traits. In addition, combining eIF4E1 mutations with a quantitatively resistant genetic background had a strong positive effect on resistance durability. Analysing the evolutionary forces imposed by pepper genotypes onto virus populations allowed identifying three key factors improving plant resistance durability: the complexity of mutational pathways involved in virus adaptation to the plant resistance, the decrease of competitivity induced by these mutations on the virus and the intensity of genetic drift imposed by plant genotypes on the virus during its infection cycle.","PeriodicalId":11102,"journal":{"name":"Current topics in microbiology and immunology","volume":"439 ","pages":"121-138"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10474580","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Sex Difference in Amebiasis. Amebias的性别差异。

3区医学

Current topics in microbiology and immunology Pub Date : 2023-01-01 DOI: 10.1007/978-3-031-35139-6_8

Marco Er-Lukowiak, Charlotte Hansen, Hanna Lotter

引用次数: 0

Effects of Biological Sex and Pregnancy on SARS-CoV-2 Pathogenesis and Vaccine Outcomes. 生物学性别和妊娠对严重急性呼吸系统综合征冠状病毒2型发病机制和疫苗效果的影响。

3区医学

Current topics in microbiology and immunology Pub Date : 2023-01-01 DOI: 10.1007/978-3-031-35139-6_4

Janna R Shapiro, Craig W Roberts, Kasandra Arcovio, Lisa Reade, Sabra L Klein, Santosh Dhakal

{"title":"Effects of Biological Sex and Pregnancy on SARS-CoV-2 Pathogenesis and Vaccine Outcomes.","authors":"Janna R Shapiro, Craig W Roberts, Kasandra Arcovio, Lisa Reade, Sabra L Klein, Santosh Dhakal","doi":"10.1007/978-3-031-35139-6_4","DOIUrl":"10.1007/978-3-031-35139-6_4","url":null,"abstract":"SARS-CoV-2 is the causative agent of COVID-19 in humans and has resulted in the death of millions of people worldwide. Similar numbers of infections have been documented in males and females; males, however, are more likely than females to be hospitalized, require intensive care unit, or die from COVID-19. The mechanisms that account for this are multi-factorial and are likely to include differential expression of ACE2 and TMPRSS2 molecules that are required for viral entry into hosts cells and sex differences in the immune response, which are due to modulation of cellular functions by sex hormones and differences in chromosomal gene expression. Furthermore, as comorbidities are also associated with poorer outcomes to SARS-CoV-2 infection and several comorbidities are overrepresented in males, these are also likely to contribute to the observed sex differences. Despite their relative better prognosis following infection with SARS-CoV-2, females do have poorer outcomes during pregnancy. This is likely to be due to pregnancy-induced changes in the immune system that adversely affect viral immunity and disruption of the renin-angiotensin system. Importantly, vaccination reduces the severity of disease in males and females, including pregnant females, and there is no evidence that vaccination has any adverse effects on the outcomes of pregnancy.","PeriodicalId":11102,"journal":{"name":"Current topics in microbiology and immunology","volume":"441 ","pages":"75-110"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10211564","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 1

Subversion of Programed Cell Death by Poxviruses. 痘病毒对程序性细胞死亡的颠覆

3区医学

Current topics in microbiology and immunology Pub Date : 2023-01-01 DOI: 10.1007/82_2020_229

Heather S Koehler, Bertram L Jacobs

{"title":"Subversion of Programed Cell Death by Poxviruses.","authors":"Heather S Koehler, Bertram L Jacobs","doi":"10.1007/82_2020_229","DOIUrl":"10.1007/82_2020_229","url":null,"abstract":"Poxviruses have been long regarded as potent inhibitors of apoptotic cell death. More recently, they have been shown to inhibit necroptotic cell death through two distinct strategies. These strategies involve either blocking virus sensing by the host pattern recognition receptor, ZBP1 (also called DAI) or by influencing receptor interacting protein kinase (RIPK)3 signal transduction by inhibition of activation of the executioner of necroptosis, mixed lineage kinase-like protein (MLKL). Vaccinia virus E3 specifically blocks ZBP1 → RIPK3 → MLKL necroptosis, leaving virus-infected cells susceptible to the TNF death-receptor signaling (e.g., TNFR1 → FADD → RIPK1 → RIPK3 → MLKL), and, potentially, TLR3 → TRIF → RIPK3 → MLKL necroptosis. While E3 restriction of necroptosis appears to be common to many poxviruses that infect vertebrate hosts, another modulatory strategy not observed in vaccinia or variola virus manifests through subversion of MLKL activation. Recently described viral mimics of MLKL in other chordopoxviruses inhibit all three modes of necroptotic cell death. As with inhibition of apoptosis, the evolution of potentially redundant viral mechanisms to inhibit programmed necroptotic cell death emphasizes the importance of this pathway in the arms race between pathogens and their hosts.","PeriodicalId":11102,"journal":{"name":"Current topics in microbiology and immunology","volume":" ","pages":"105-131"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8319220/pdf/nihms-1714537.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38870128","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0