Crop Journal最新文献_第8页

Genome-wide analysis of nuclear factor Y genes and functional investigation of watermelon ClNF-YB9 during seed development 西瓜核因子Y基因的全基因组分析及ClNF-YB9在种子发育过程中的功能研究

IF 6.6 1区农林科学

Crop Journal Pub Date : 2023-10-01 Epub Date: 2023-04-05 DOI: 10.1016/j.cj.2023.03.005

Qin Feng , Ling Xiao , Jiafa Wang , Jie Wang , Chenyang Chen , Jianyang Sun , Xixi Wu , Man Liu , Xian Zhang , Shujuan Tian , Li Yuan

{"title":"Genome-wide analysis of nuclear factor Y genes and functional investigation of watermelon ClNF-YB9 during seed development","authors":"Qin Feng , Ling Xiao , Jiafa Wang , Jie Wang , Chenyang Chen , Jianyang Sun , Xixi Wu , Man Liu , Xian Zhang , Shujuan Tian , Li Yuan","doi":"10.1016/j.cj.2023.03.005","DOIUrl":"https://doi.org/10.1016/j.cj.2023.03.005","url":null,"abstract":"<div>The nuclear factor Y (NF-Y) gene family is a class of transcription factors that are widely distributed in eukaryotes and are involved in various biological processes. However, the NF-Y gene family members in watermelon, a valued and nutritious fruit, remain largely unknown and their functions have not been characterized. In the present study, 22 ClNF-Y genes in watermelon, 29 CsNF-Y genes in cucumber, and 24 CmNF-Y genes in melon were identified based on the whole-genome investigation and their protein properties, gene location, gene structure, motif composition, conserved domain, and evolutionary relationship were investigated. ClNF-YB9 from watermelon and its homologs in cucumber and melon were expressed specifically in seeds. Its expression remained low in the early stages of watermelon seed development, increased at 20 days after pollination (DAP), and peaked at 45–50 DAP. Moreover, the knockout mutant Clnf-yb9 exhibited abnormal leafy cotyledon phenotype, implying its critical role during seed formation. Finally, protein interaction assays showed that ClNF-YB9 interacts with all ClNF-YCs and the ClNF-YB9-YC4 heterodimer was able to recruit a ClNF-YA7 subunit to assemble a complete NF-Y complex, which may function in seed development. This study revealed the structure and evolutionary relationships of the NF-Y gene family in Cucurbitaceae and the novel function of ClNF-YB9 in regulating seed development in watermelon.</div>","PeriodicalId":10790,"journal":{"name":"Crop Journal","volume":"11 5","pages":"Pages 1469-1479"},"PeriodicalIF":6.6,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49803785","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Introgression of sharp eyespot resistance from Dasypyrum villosum chromosome 2VL into bread wheat 绒毛草2VL染色体对小麦尖斑病抗性的导入

IF 6.6 1区农林科学

Crop Journal Pub Date : 2023-10-01 Epub Date: 2023-06-22 DOI: 10.1016/j.cj.2023.04.013

Caiyun Liu , Wei Guo , Yang Wang , Bisheng Fu , Jaroslav Doležel , Ying Liu , Wenling Zhai , Mahmoud Said , István Molnár , Kateřina Holušová , Ruiqi Zhang , Jizhong Wu

{"title":"Introgression of sharp eyespot resistance from Dasypyrum villosum chromosome 2VL into bread wheat","authors":"Caiyun Liu , Wei Guo , Yang Wang , Bisheng Fu , Jaroslav Doležel , Ying Liu , Wenling Zhai , Mahmoud Said , István Molnár , Kateřina Holušová , Ruiqi Zhang , Jizhong Wu","doi":"10.1016/j.cj.2023.04.013","DOIUrl":"https://doi.org/10.1016/j.cj.2023.04.013","url":null,"abstract":"<div>Wheat sharp eyespot, a stem disease caused by the soilborne fungus Rhizoctonia cerealis van der Hoeven, has become a threat to wheat production worldwide. Exploiting resistance resources from wild relatives of wheat is a promising strategy for controlling this disease. In this study, a new wheat–Dasypyrum villosum T2DS·2V#4L translocation line in the background of Chinese Spring (CS) showed stable resistance to R. cerealis. Introgression of the T2DS·2V#4L chromosome into wheat cultivar Aikang 58 by backcrossing produced a marked increase in sharp eyespot resistance in NIL-T2DS·2V#4L in comparison with NIL-T2DS·2DL, and no detrimental effects of 2V#4L on agronomic traits were observed in the BC2F2, BC2F2:3, and BC2F2:4 generations. Flow-sorted sequencing of 2V#4L yielded 384.3 Mb of assembled sequence, and 8836 genes were predicted of which 6154 had orthologs in at least one of the 2AL, 2BL, and 2DL arms of CS, whereas 1549 genes were unique to 2V#4L. About 100,000 SNPs were detected in genes of 2V#4L and 2DL in 10 sequenced bread wheat cultivars. A Kompetitive Allele Specific Polymerase chain reaction and 30 conserved ortholog sequence markers were developed to trace the 2V#4L chromatin in wheat backgrounds. T2DS·2V#4L compensating translocation lines represent novel germplasm with sharp eyespot resistance and the markers will allow rapid detection in breeding programs.</div>","PeriodicalId":10790,"journal":{"name":"Crop Journal","volume":"11 5","pages":"Pages 1512-1520"},"PeriodicalIF":6.6,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49803759","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 2

Genomic location of Gb1, a unique gene conferring wheat resistance to greenbug biotype F 小麦对F型绿蝽抗性的独特基因Gb1的基因组定位

IF 6.6 1区农林科学

Crop Journal Pub Date : 2023-10-01 Epub Date: 2023-02-23 DOI: 10.1016/j.cj.2023.02.002

Xiangyang Xu , Genqiao Li , Guihua Bai , Brett F. Carver , Ruolin Bian , Amy Bernardo , J. Scott Armstrong

{"title":"Genomic location of Gb1, a unique gene conferring wheat resistance to greenbug biotype F","authors":"Xiangyang Xu , Genqiao Li , Guihua Bai , Brett F. Carver , Ruolin Bian , Amy Bernardo , J. Scott Armstrong","doi":"10.1016/j.cj.2023.02.002","DOIUrl":"https://doi.org/10.1016/j.cj.2023.02.002","url":null,"abstract":"<div>Greenbug (Schizaphis graminum, Rondani) is a serious insect pest in many wheat growing regions and has been infesting cereal crops in the USA for over a century. Continuous occurrence of new greenbug biotypes makes it essential to explore all greenbug resistant sources available to manage this pest. Gb1, a recessive greenbug resistance gene in DS28A, confers resistance to several economically important greenbug biotypes and is the only gene found to be resistant to greenbug biotype F. A set of 174 F2:3 lines from the cross DS28A × Custer was evaluated for resistance to greenbug biotype F in 2020 and 2022. Selective genotyping of the corresponding F2 population using single nucleotide polymorphism (SNP) markers generated by genotyping-by-sequencing (GBS) led to the identification of a candidate genomic region for Gb1. Thus, SSR markers previously mapped in this region were used to genotype the entire F2 population, and kompetitive allele specific PCR (KASP) markers were also developed from SNPs in the target region. Gb1 was placed in the terminal region of the short arm of chromosome 1A, and its location was confirmed in a second population derived from the cross DS28A × PI 697274. The combined data analysis from the two mapping populations delimited Gb1 to a < 1 Mb interval between 13,328,200 and 14,241,426 bp on 1AS.</div>","PeriodicalId":10790,"journal":{"name":"Crop Journal","volume":"11 5","pages":"Pages 1595-1599"},"PeriodicalIF":6.6,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49845239","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 1

Flowering-time regulation by the circadian clock: from Arabidopsis to crops 生物钟对开花时间的调节:从拟南芥到农作物

1区农林科学

Crop Journal Pub Date : 2023-09-01 DOI: 10.1016/j.cj.2023.09.002

Mingkang Yang, Wenjie Lin, Yarou Xu, Biyu Xie, Baiyin Yu, Liang Chen, Wei Huang

引用次数: 0

Overexpression of ZxABCG11 from Zygophyllum xanthoxylum enhances tolerance to drought and heat in alfalfa by increasing cuticular wax deposition ZxABCG11在苜蓿中的过表达通过增加表皮蜡的沉积增强苜蓿对干旱和高温的耐受性

IF 6.6 1区农林科学

Crop Journal Pub Date : 2023-08-01 Epub Date: 2022-12-16 DOI: 10.1016/j.cj.2022.11.007

Linbo Liu , Aike Bao , Hujun Li , Wanpeng Bai , Haishuang Liu , Ye Tian , Yiying Zhao , Fangchen Xia , Suomin Wang

{"title":"Overexpression of ZxABCG11 from Zygophyllum xanthoxylum enhances tolerance to drought and heat in alfalfa by increasing cuticular wax deposition","authors":"Linbo Liu , Aike Bao , Hujun Li , Wanpeng Bai , Haishuang Liu , Ye Tian , Yiying Zhao , Fangchen Xia , Suomin Wang","doi":"10.1016/j.cj.2022.11.007","DOIUrl":"https://doi.org/10.1016/j.cj.2022.11.007","url":null,"abstract":"<div>Drought and heat stresses cause yield losses in alfalfa, a forage crop cultivated worldwide. Improving its drought and heat tolerance is desirable for maintaining alfalfa productivity in hot, arid regions. Cuticular wax forms a protective barrier on aerial surfaces of land plants against environmental stresses. ABCG11 encodes an ATP binding cassette (ABC) transporter that functions in the cuticular wax transport pathway. In this study, ZxABCG11 from the xerophyte Zygophyllum xanthoxylum was introduced into alfalfa by Agrobacterium tumefaciens-mediated transformation. Compared to the wild type (WT), transgenic alfalfa displayed faster growth, higher wax crystal density, and thicker cuticle on leaves under normal condition. Under either drought or heat treatment in greenhouse conditions, the plant height and shoot biomass of transgenic lines were significantly higher than those of the WT. Transgenic alfalfa showed excellent growth and 50% greater hay yield than WT under field conditions in a hot, arid region. Overexpression of ZxABCG11 up-regulated wax-related genes and resulted in more cuticular wax deposition, which contributed to reduction of cuticle permeability and thus increased water retention and photosynthesis capacity of transgenic alfalfa. Thus, overexpression of ZxABCG11 can simultaneously improve biomass yield, drought and heat tolerance in alfalfa by increasing cuticular wax deposition. Our study provides a promising avenue for developing novel forage cultivars suitable for planting in hot, arid, marginal lands.</div>","PeriodicalId":10790,"journal":{"name":"Crop Journal","volume":"11 4","pages":"Pages 1140-1151"},"PeriodicalIF":6.6,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49804976","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 5

Evolution of wheat architecture, physiology, and metabolism during domestication and further cultivation: Lessons for crop improvement 驯化和进一步栽培过程中小麦结构、生理和代谢的演变：作物改良的经验教训

IF 6.6 1区农林科学

Crop Journal Pub Date : 2023-08-01 Epub Date: 2023-07-18 DOI: 10.1016/j.cj.2023.06.006

Artūrs Katamadze , Omar Vergara-Díaz , Estefanía Uberegui , Ander Yoldi-Achalandabaso , José Luis Araus , Rubén Vicente

{"title":"Evolution of wheat architecture, physiology, and metabolism during domestication and further cultivation: Lessons for crop improvement","authors":"Artūrs Katamadze , Omar Vergara-Díaz , Estefanía Uberegui , Ander Yoldi-Achalandabaso , José Luis Araus , Rubén Vicente","doi":"10.1016/j.cj.2023.06.006","DOIUrl":"https://doi.org/10.1016/j.cj.2023.06.006","url":null,"abstract":"<div>In recent decades, genetic advances in yield improvement in the major cereal crops, including wheat, has stagnated or proceeded at a slower rate than is required to meet future global food demand, particularly in the face of climate change. To reverse this situation, and in view of the future climate scenario, there is a need to increase the genetic diversity of wheat to increase its productivity, quality, stability, and adaptation to local agro-environments. The abundant genetic resources and literature are a basis for wheat improvement. However, many species, such as wild relatives, landraces, and old cultivars have not been studied beyond their agronomic characteristics, highlighting the lack of understanding of the physiological and metabolic processes (and their integration) associated with higher productivity and resilience in limiting environments. Retrospective studies using wheat ancestors and modern cultivars may identify novel traits that have not previously been considered, or have been underestimated, during domestication and breeding, but that may contribute to future food security. This review describes existing wheat genetic diversity and changes that occurred during domestication and breeding, and considers whether mining natural variation among wheat ancestors offers an opportunity to enhance wheat agronomic performance, spike architecture, canopy- and organ-level photosynthetic capacity, and responses to abiotic stress, as well as to develop new wheat hybrids.</div>","PeriodicalId":10790,"journal":{"name":"Crop Journal","volume":"11 4","pages":"Pages 1080-1096"},"PeriodicalIF":6.6,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49847090","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 2

Genome-wide analysis of soybean DnaJA-family genes and functional characterization of GmDnaJA6 responses to saline and alkaline stress 大豆DnaJA家族基因的全基因组分析及GmDnaJA6对盐碱胁迫反应的功能表征

IF 6.6 1区农林科学

Crop Journal Pub Date : 2023-08-01 Epub Date: 2023-07-11 DOI: 10.1016/j.cj.2023.06.005

Binshuo Zhang , Zhen Liu , Runnan Zhou , Peng Cheng, Haibo Li, Zhiyang Wang, Ying Liu, Mingyang Li, Zhenqing Zhao, Zhenbang Hu, Qingshan Chen, Xiaoxia Wu, Ying Zhao

引用次数: 1

Genetic variation in ZmSO contributes to ABA response and drought tolerance in maize seedlings ZmSO的遗传变异对玉米幼苗ABA反应和抗旱性的影响

IF 6.6 1区农林科学

Crop Journal Pub Date : 2023-08-01 Epub Date: 2023-02-27 DOI: 10.1016/j.cj.2023.02.004

Zongliang Xia , Fangfang Liu , Meiping Wang , Jiafa Chen , Zijian Zhou , Jianyu Wu

引用次数: 1

Phosphorylation regulation of nitrogen, phosphorus, and potassium uptake systems in plants 植物氮、磷和钾吸收系统的磷酸化调节

IF 6.6 1区农林科学

Crop Journal Pub Date : 2023-08-01 Epub Date: 2023-07-05 DOI: 10.1016/j.cj.2023.06.003

Dongli Hao , Xiaohui Li , Weiyi Kong , Rongrong Chen , Jianxiu Liu , Hailin Guo , Jinyan Zhou

{"title":"Phosphorylation regulation of nitrogen, phosphorus, and potassium uptake systems in plants","authors":"Dongli Hao , Xiaohui Li , Weiyi Kong , Rongrong Chen , Jianxiu Liu , Hailin Guo , Jinyan Zhou","doi":"10.1016/j.cj.2023.06.003","DOIUrl":"https://doi.org/10.1016/j.cj.2023.06.003","url":null,"abstract":"<div>The uptake of ammonium, nitrate, phosphorus, and potassium ions by roots is mediated by specific ion transporter or channel proteins, and protein phosphorylation regulation events occurring on these proteins and their regulators determine their ultimate activity. Elucidating the mechanism by which protein phosphorylation modification regulates nutrient uptake will advance plant breeding for high nutrient-use efficiency. In this review, it is concluded that the root nutrient absorption system is composed of several, but not all, members of a specific ion transporter or channel family. Under nutrient-starvation conditions, protein phosphorylation-based regulation of these proteins and associated transcription factors increases ion transporter- or channel-mediated nutrient uptake capacity via direct function activity enhancement, allowing more protein trafficking to the plasma membrane, by strengthening the interaction of transporters and channels with partner proteins, by increasing their protein stability, and by transcriptional activation. Under excessive nutrient conditions, protein phosphorylation-based regulation suppresses nutrient uptake by reversing these processes. Strengthening phosphorylation regulation items that increase nutrient absorption and weakening phosphorylation modification items that are not conducive to nutrient absorption show potential as strategies for increasing nutrient use efficiency.</div>","PeriodicalId":10790,"journal":{"name":"Crop Journal","volume":"11 4","pages":"Pages 1034-1047"},"PeriodicalIF":6.6,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49805025","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 3

Identification of Green-Revertible Yellow 3 (GRY3), encoding a 4-hydroxy-3-methylbut-2-enyl diphosphate reductase involved in chlorophyll synthesis under high temperature and high light in rice 绿色可还原黄3（GRY3）的鉴定，编码一种参与水稻高温高光下叶绿素合成的4-羟基-3-甲基丁-2-烯基二磷酸还原酶

IF 6.6 1区农林科学

Crop Journal Pub Date : 2023-08-01 Epub Date: 2023-02-26 DOI: 10.1016/j.cj.2023.02.001

Hongzhen Jiang , Anpeng Zhang , Banpu Ruan , Haitao Hu , Rui Guo , Jingguang Chen , Qian Qian , Zhenyu Gao

{"title":"Identification of Green-Revertible Yellow 3 (GRY3), encoding a 4-hydroxy-3-methylbut-2-enyl diphosphate reductase involved in chlorophyll synthesis under high temperature and high light in rice","authors":"Hongzhen Jiang , Anpeng Zhang , Banpu Ruan , Haitao Hu , Rui Guo , Jingguang Chen , Qian Qian , Zhenyu Gao","doi":"10.1016/j.cj.2023.02.001","DOIUrl":"https://doi.org/10.1016/j.cj.2023.02.001","url":null,"abstract":"<div>Chlorophyll, a green pigment in photosynthetic organisms, is generated by two distinct biochemical pathways, the tetrapyrrole biosynthetic pathway (TBP) and the methylerythritol 4-phosphate (MEP) pathway. MEP is one of the pathways for isoprenoid synthesis in plants, with 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (HDR) catalyzing its last step. In this study, we isolated a green-revertible yellow leaf mutant gry3 in rice and cloned the GRY3 gene, which encodes a HDR participating in geranylgeranyl diphosphate (GGPP) biosynthesis in chloroplast. A complementation experiment confirmed that a missense mutation (C to T) in the fourth exon of LOC_Os03g52170 causes the gry3 phenotype. Under high temperature and high light, transcript and protein abundances of GRY3 were reduced in the gry3 mutant. Transcriptional expression of chlorophyll biosynthesis, chloroplast development, and genes involved in photosynthesis were also affected. Excessive reactive oxygen species accumulation, cell death, and photosynthetic proteins degradation were occurred in the mutant. The content of GGPP was reduced in gry3 compared with Nipponbare, resulting in a stoichiometric imbalance of tetrapyrrolic chlorophyll precursors. These results shed light on the response of chloroplast biogenesis and maintenance in plants to high-temperature and high-light stress.</div>","PeriodicalId":10790,"journal":{"name":"Crop Journal","volume":"11 4","pages":"Pages 1171-1180"},"PeriodicalIF":6.6,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49805035","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 2