Cell Death and Differentiation最新文献

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Macrophage junctional adhesion molecule-like (JAML) protein promotes NLRP3 inflammasome activation in the development of atherosclerosis 巨噬细胞连接粘附分子样蛋白(JAML)在动脉粥样硬化的发展过程中促进NLRP3炎性体的激活
IF 12.4 1区 生物学
Cell Death and Differentiation Pub Date : 2025-03-28 DOI: 10.1038/s41418-025-01489-5
Huiliang Cui, Lin Xie, Hanlin Lu, Cheng Cheng, Fei Xue, Zhenguo Wu, Li Liu, Lei Qiao, Cheng Zhang, Wencheng Zhang, Jianmin Yang
{"title":"Macrophage junctional adhesion molecule-like (JAML) protein promotes NLRP3 inflammasome activation in the development of atherosclerosis","authors":"Huiliang Cui, Lin Xie, Hanlin Lu, Cheng Cheng, Fei Xue, Zhenguo Wu, Li Liu, Lei Qiao, Cheng Zhang, Wencheng Zhang, Jianmin Yang","doi":"10.1038/s41418-025-01489-5","DOIUrl":"https://doi.org/10.1038/s41418-025-01489-5","url":null,"abstract":"<p>Inflammation plays a crucial role in the progression of atherosclerosis. Junctional adhesion molecule-like protein (JAML), a type-I transmembrane glycoprotein, activates downstream signaling pathways. However, the precise role of macrophage-derived JAML in inflammation and atherosclerosis remains unclear. This study aimed to generate mice with macrophage-specific deletion or overexpression of JAML, with the focus of assessing its impact on macrophage function and elucidating its regulatory mechanism in atherosclerosis. High-throughput data screening was employed to investigate JAML expression in atherosclerosis, and macrophage-specific JAML-knockout and transgenic mice models were utilized to examine the effects of JAML on atherosclerosis. Furthermore, the role of JAML was assessed using Oil Red O staining, RNA-sequencing analysis, and co-immunoprecipitation techniques. Increased JAML expression was observed in macrophages from both mice and patients with atherosclerosis. Macrophage-specific JAML deletion attenuated atherosclerosis and inflammation, whereas macrophage-specific JAML overexpression exacerbated these conditions. Mechanistically, JAML deletion inhibited inflammation by decreasing nuclear translocation of pyruvate kinase M2 (PKM2) and PKM2/p65 complex formation, which consequently suppressed the nuclear factor kappa B (NF-κB) pathway and NLRP3 inflammasome activation. Taken together, these findings demonstrate that macrophage-expressed JAML facilitates the progression of atherosclerosis by activating the NF-κB pathway and NLRP3 inflammasome through nuclear migration and phosphorylation of PKM2. Notably, our study revealed a novel mechanism for the regulation of NLRP3 inflammasome activation in atherosclerosis. Therefore, targeting JAML may be an effective treatment strategy for atherosclerosis, a condition characterized by chronic inflammation.</p>","PeriodicalId":9731,"journal":{"name":"Cell Death and Differentiation","volume":"4 1","pages":""},"PeriodicalIF":12.4,"publicationDate":"2025-03-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143723214","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The USP43/RNF2 axis negatively regulates antiviral innate immunity by promoting TBK1 ubiquitination and degradation USP43/RNF2轴通过促进TBK1泛素化和降解负调控抗病毒先天免疫
IF 12.4 1区 生物学
Cell Death and Differentiation Pub Date : 2025-03-28 DOI: 10.1038/s41418-025-01491-x
Xibao Zhao, Qianqian Di, Jin Chen, Jing Ling, Jiazheng Quan, Zizhao Zhao, Hongrui Li, Shaoying Chen, Xunwei Li, Xiwei Guo, Han Wu, Yue Xiao, Weilin Chen
{"title":"The USP43/RNF2 axis negatively regulates antiviral innate immunity by promoting TBK1 ubiquitination and degradation","authors":"Xibao Zhao, Qianqian Di, Jin Chen, Jing Ling, Jiazheng Quan, Zizhao Zhao, Hongrui Li, Shaoying Chen, Xunwei Li, Xiwei Guo, Han Wu, Yue Xiao, Weilin Chen","doi":"10.1038/s41418-025-01491-x","DOIUrl":"https://doi.org/10.1038/s41418-025-01491-x","url":null,"abstract":"<p>The E3 ubiquitin ligase usually regulates the substrate proteins ubiquitination and degradation, but the study of itself post-translational modification and stability is still elusive. Here, we reveal that E3 ubiquitin ligase ring finger protein 2 (RNF2) is deubiquitinated and stabilized by ubiquitin specific peptidase 43 (USP43) through interactome and quantitative ubiquitinome mass spectrometry analysis. This study demonstrated that USP43, as a deubiquitinating enzyme, negatively regulates the expression of type I interferon (IFN) and the <i>Usp43</i> deficient enhances antiviral innate immune response against VSV infection both in vitro and in vivo. Mechanistically, USP43 negatively regulates antiviral immunity by promoting RNF2-mediated TBK1 ubiquitination and degradation. USP43 stabilizes RNF2 by removing K48-linked ubiquitination of RNF2 at Lys239 and Lys249, while RNF2 promotes TBK1 degradation by increasing K48-linked ubiquitination of TBK1 at Lys670. These findings uncover the E3 ubiquitin ligase RNF2 post-translational ubiquitination modification and stability regulation, and reveals a novel mechanism that the USP43/RNF2 axis in regulating antiviral innate immunity.</p>","PeriodicalId":9731,"journal":{"name":"Cell Death and Differentiation","volume":"17 1","pages":""},"PeriodicalIF":12.4,"publicationDate":"2025-03-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143723215","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The transcription factor LHX2 mediates and enhances oncogenic BMP signaling in medulloblastoma 转录因子LHX2介导并增强成神经管细胞瘤的BMP信号传导
IF 12.4 1区 生物学
Cell Death and Differentiation Pub Date : 2025-03-28 DOI: 10.1038/s41418-025-01488-6
Yae Ohata, Mohamad M. Ali, Yutaro Tsubakihara, Yuka Itoh, Gabriela Rosén, Tobias Bergström, Anita Morén, Irene Golán-Cancela, Ayana Nakada, Oleksandr Voytyuk, Maiko Tsuchiya, Rei Fukui, Kouhei Yamamoto, Paula Martín-Rubio, Patricia Sancho, Carina Strell, Patrick Micke, Robert J. Wechsler-Reya, Yoshinobu Hashizume, Kohei Miyazono, Laia Caja, Carl-Henrik Heldin, Fredrik J. Swartling, Aristidis Moustakas
{"title":"The transcription factor LHX2 mediates and enhances oncogenic BMP signaling in medulloblastoma","authors":"Yae Ohata, Mohamad M. Ali, Yutaro Tsubakihara, Yuka Itoh, Gabriela Rosén, Tobias Bergström, Anita Morén, Irene Golán-Cancela, Ayana Nakada, Oleksandr Voytyuk, Maiko Tsuchiya, Rei Fukui, Kouhei Yamamoto, Paula Martín-Rubio, Patricia Sancho, Carina Strell, Patrick Micke, Robert J. Wechsler-Reya, Yoshinobu Hashizume, Kohei Miyazono, Laia Caja, Carl-Henrik Heldin, Fredrik J. Swartling, Aristidis Moustakas","doi":"10.1038/s41418-025-01488-6","DOIUrl":"https://doi.org/10.1038/s41418-025-01488-6","url":null,"abstract":"<p>Oncogenic events perturb cerebellar development leading to medulloblastoma, a common childhood brain malignancy. Molecular analyses classify medulloblastoma into the WNT, SHH, Group 3 and Group 4 subgroups. Bone morphogenetic protein (BMP) pathways control cerebellar development and have been linked to the progression of medulloblastoma disease, with major remaining gaps in their mechanistic and clinically-relevant roles. We therefore aimed at exploring BMP mechanisms of action in medulloblastoma. Patient-derived tumors from different subgroups were analyzed in mouse xenografts, complemented by independent tumor immunohistochemical analysis. Cell-based assays analyzed signaling mechanisms. Medulloblastoma cell orthotopic xenografts analyzed tumor growth and metastasis in vivo. Active BMP signaling, detected as nuclear and phosphorylated SMAD1/5, characterized several medulloblastoma subgroups, with enrichment in Group 4, SHH and Group 3 tumors. Spatial transcriptomics in tumor areas, complemented by transcriptomic analysis of multiple cell models, identified BMP-dependent transcriptional induction of the <i>LIM-homeobox gene 2</i> (<i>LHX2</i>). BMP signaling via SMADs induced <i>LHX2</i> expression and LHX2 transcriptionally induced BMP type I receptor (ACVR1) expression by association with the proximal promoter region of the <i>ACVR1</i> gene. BMP signaling and LHX2 gain-of-function expression led to enriched stemness and associated chemoresistance in medulloblastoma cultures. In-mouse orthotopic transplantation of paired primary/recurrent Group 4 medulloblastoma cell populations, correspondingly expressing LHX2-low/BMP-low signaling and LHX2-high/BMP-high signaling, ascribed to the latter (high) group more efficient tumor propagation and spinal cord metastatic potential. Depletion of LHX2 in these recurrent tumor cells suppressed both BMP signaling and tumor propagation in vivo. Thus, LHX2 cooperates with, and enhances, oncogenic BMP signaling in medulloblastoma tumors. The molecular pathway that couples LHX2 function to BMP signaling in medulloblastoma deepens our understanding this malignancy.</p>","PeriodicalId":9731,"journal":{"name":"Cell Death and Differentiation","volume":"30 1","pages":""},"PeriodicalIF":12.4,"publicationDate":"2025-03-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143723209","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The histone modifier KAT2A presents a selective target in a subset of well-differentiated microsatellite-stable colorectal cancers 组蛋白修饰子KAT2A在分化良好的微卫星稳定型结直肠癌中具有选择性靶点
IF 12.4 1区 生物学
Cell Death and Differentiation Pub Date : 2025-03-27 DOI: 10.1038/s41418-025-01479-7
Vida Kufrin, Annika Seiler, Silke Brilloff, Helen Rothfuß, Sandra Küchler, Silvia Schäfer, Elahe Rahimian, Jonas Baumgarten, Li Ding, Frank Buchholz, Claudia R. Ball, Martin Bornhäuser, Hanno Glimm, Marius Bill, Alexander A. Wurm
{"title":"The histone modifier KAT2A presents a selective target in a subset of well-differentiated microsatellite-stable colorectal cancers","authors":"Vida Kufrin, Annika Seiler, Silke Brilloff, Helen Rothfuß, Sandra Küchler, Silvia Schäfer, Elahe Rahimian, Jonas Baumgarten, Li Ding, Frank Buchholz, Claudia R. Ball, Martin Bornhäuser, Hanno Glimm, Marius Bill, Alexander A. Wurm","doi":"10.1038/s41418-025-01479-7","DOIUrl":"https://doi.org/10.1038/s41418-025-01479-7","url":null,"abstract":"<p>Lysine acetyltransferase 2 A (KAT2A) plays a pivotal role in epigenetic gene regulation across various types of cancer. In colorectal cancer (CRC), increased <i>KAT2A</i> expression is associated with a more aggressive phenotype. Our study aims to elucidate the molecular underpinnings of <i>KAT2A</i> dependency in CRC and assess the consequences of <i>KAT2A</i> depletion. We conducted a comprehensive analysis by integrating CRISPR-Cas9 screening data with genomics, transcriptomics, and global acetylation patterns in CRC cell lines to pinpoint molecular markers indicative of <i>KAT2A</i> dependency. Additionally, we characterized the phenotypic effect of a CRISPR-interference-mediated <i>KAT2A</i> knockdown in CRC cell lines and patient-derived 3D spheroid cultures. Moreover, we assessed the effect of <i>KAT2A</i> depletion within a patient-derived xenograft mouse model in vivo. Our findings reveal that <i>KAT2A</i> dependency is closely associated with microsatellite stability, lower mutational burden, and increased molecular differentiation signatures in CRC, independent of the <i>KAT2A</i> expression levels. <i>KAT2A-</i>dependent CRC cells display higher gene expression levels and enriched H3K27ac marks at gene loci linked to enterocytic differentiation. Furthermore, loss of <i>KAT2A</i> leads to decreased cell growth and viability in vitro and in vivo, downregulation of proliferation- and stem cell-associated genes, and induction of differentiation markers. Altogether, our data show that a specific subset of CRCs with a more differentiated phenotype relies on KAT2A. For these CRC cases, KAT2A might represent a promising novel therapeutic target.</p>","PeriodicalId":9731,"journal":{"name":"Cell Death and Differentiation","volume":"57 1","pages":""},"PeriodicalIF":12.4,"publicationDate":"2025-03-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143712973","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
SIRT7 regulates T-cell antitumor immunity through modulation BCAA and fatty acid metabolism SIRT7通过调节BCAA和脂肪酸代谢调节t细胞抗肿瘤免疫
IF 12.4 1区 生物学
Cell Death and Differentiation Pub Date : 2025-03-26 DOI: 10.1038/s41418-025-01490-y
Zuojian Hu, Yingji Chen, Jielin Lei, Ke Wang, Ziyue Pan, Lei Zhang, Xiayun Xu, Wenhui Li, Lianjun Zhang, Xue Qin, Ronghua Liu, Yiwei Chu, Chenji Wang, Hongxiu Yu
{"title":"SIRT7 regulates T-cell antitumor immunity through modulation BCAA and fatty acid metabolism","authors":"Zuojian Hu, Yingji Chen, Jielin Lei, Ke Wang, Ziyue Pan, Lei Zhang, Xiayun Xu, Wenhui Li, Lianjun Zhang, Xue Qin, Ronghua Liu, Yiwei Chu, Chenji Wang, Hongxiu Yu","doi":"10.1038/s41418-025-01490-y","DOIUrl":"https://doi.org/10.1038/s41418-025-01490-y","url":null,"abstract":"<p>SIRT7, one of the least studied members of the Sirtuins family, is an NAD<sup>+</sup>-dependent lysine deacetylase and desuccinylase. While previous studies using affinity enrichment and quantitative proteomics identified numerous lysine-deacetylated substrates of SIRT7, its lysine-desuccinylated substrates remain underexplored, limiting our understanding of its role in cellular homeostasis. Here, we demonstrated that SIRT7 is predominantly expressed in immune tissues, especially in adaptive immune cells, including T cells. Through proteomics, lysine succinylome, and acetylome analysis of spleen from wild-type (WT) and <i>Sirt7</i><sup><i>−/−</i></sup> mice, we identified significant succinylation of proteins involved in the branched-chain amino acid (BCAA) catabolism pathway in <i>Sirt7</i><sup><i>−/−</i></sup> mice. We further found that SIRT7 partially localizes to mitochondria, interacting with key enzymes of the BCAA catabolism pathway and promoting their desuccinylation. <i>Sirt7</i> deficiency leads to enhanced BCAA catabolism, accumulation of acyl-CoA, and increased fatty acid (FA) synthesis. As T cells rely heavily on amino acid metabolism for activation, differentiation, and function, we investigated the impact of SIRT7 using a T cell-specific <i>Sirt7</i> knockout mouse model (<i>Sirt7</i><sup><i>fl/fl</i></sup><i>Cd4</i>-Cre). Our results show that SIRT7 is crucial for T cell proliferation, activation, and antitumor function. <i>Sirt7</i> deficiency in T cells results in the accumulation of BCAA metabolites and FAs, reduced cytotoxic cytokines secretion such as IFN-γ, and T cell exhaustion. Reducing BCAA levels with BT2, a BCKDK inhibitor, or BCAA-free treatment alleviated these effects, while FA treatment exacerbates them. Overall, our findings identify SIRT7 as a critical regulator linking BCAA and FA metabolism to T cell antitumor immunity, providing new insights into its potential as a therapeutic target.</p>","PeriodicalId":9731,"journal":{"name":"Cell Death and Differentiation","volume":"33 1","pages":""},"PeriodicalIF":12.4,"publicationDate":"2025-03-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143712974","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
ATOH8 confers the vulnerability of tumor cells to ferroptosis by repressing SCD expression ATOH8通过抑制SCD表达使肿瘤细胞易受铁下垂的影响
IF 12.4 1区 生物学
Cell Death and Differentiation Pub Date : 2025-03-25 DOI: 10.1038/s41418-025-01482-y
Huixiang Xiao, Xinxing Du, Huan Hou, Wenyun Guo, Zhenkeke Tao, Shijia Bao, Zhenzhen Wen, Nan Jing, Wei-Qiang Gao, Baijun Dong, Yu-Xiang Fang
{"title":"ATOH8 confers the vulnerability of tumor cells to ferroptosis by repressing SCD expression","authors":"Huixiang Xiao, Xinxing Du, Huan Hou, Wenyun Guo, Zhenkeke Tao, Shijia Bao, Zhenzhen Wen, Nan Jing, Wei-Qiang Gao, Baijun Dong, Yu-Xiang Fang","doi":"10.1038/s41418-025-01482-y","DOIUrl":"https://doi.org/10.1038/s41418-025-01482-y","url":null,"abstract":"<p>Emerging evidence indicates that transcriptional regulation plays pivotal roles in modulating cellular vulnerability to ferroptosis. However, the intricate mechanisms governing these processes remain poorly understood. In this study, we identify ATOH8, a basic helix-loop-helix (bHLH) transcription factor, as a key player in ferroptosis regulation. ATOH8 is significantly upregulated in tumor cells following treatment with a ferroptosis inducer. Overexpression of ATOH8 increases the susceptibility of tumor cells to ferroptosis, while deletion of ATOH8 promotes ferroptosis evasion. Mechanistically, ATOH8 confers the sensitivity of tumor cells to ferroptosis by suppressing the transcription of stearoyl-CoA desaturase (SCD). Additionally, another bHLH family member, TCF3, is found to functions as a co-factor with ATOH8 by forming a TCF3-ATOH8 transcriptional repressive complex that suppresses SCD transcription. Furthermore, searching for upstream element reveals that EZH2 epigenetically suppresses ATOH8 expression by promoting DNA methylation in the ATOH8 promoter region and increasing the level of H3K27 me3. Importantly, pharmacological inhibition of EZH2 in a combined with a ferroptosis inducer markedly impedes tumor growth both in vitro and in vivo. Collectively, our study elucidates a molecular link between ferroptosis and epigenetic and transcriptional regulation, highlighting the potential of EZH2 and ATOH8 as therapeutic targets for cancer treatment.</p>","PeriodicalId":9731,"journal":{"name":"Cell Death and Differentiation","volume":"21 1","pages":""},"PeriodicalIF":12.4,"publicationDate":"2025-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143703189","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
TRIM21-driven K63-linked ubiquitination of RBM38c, as a novel interactor of BECN1, contributes to DNA damage-induced autophagy trim21驱动的K63-linked RBM38c泛素化,作为BECN1的一种新型相互作用因子,有助于DNA损伤诱导的自噬
IF 12.4 1区 生物学
Cell Death and Differentiation Pub Date : 2025-03-25 DOI: 10.1038/s41418-025-01480-0
Lishenglan Xia, Yusheng Xing, Xinjia Ye, Yuanshun Wu, Ying Yang, Ziyi Yin, Anni Wang, Jian Chen, Min Zhang
{"title":"TRIM21-driven K63-linked ubiquitination of RBM38c, as a novel interactor of BECN1, contributes to DNA damage-induced autophagy","authors":"Lishenglan Xia, Yusheng Xing, Xinjia Ye, Yuanshun Wu, Ying Yang, Ziyi Yin, Anni Wang, Jian Chen, Min Zhang","doi":"10.1038/s41418-025-01480-0","DOIUrl":"https://doi.org/10.1038/s41418-025-01480-0","url":null,"abstract":"<p>Autophagy is essential in DNA damage response by limiting damage, but its responsive activation remains unclear. RBM38 (RBM38a), an RNA-binding protein, regulates mRNA metabolism and plays a key role in controlling cell cycle progression, senescence, and cancer. In this study, we uncovered a novel primate-specific isoform, RBM38c, with 32 extra amino acids from exon 2, which imparts a distinct capacity to promote autophagy upon DNA damage. TP53 increases RBM38c expression upon DNA damage, while TRIM21 facilitates its K63-linked ubiquitination at lysine (K) 35. Activated RBM38c enhances its interaction with BECN1, promoting the formation of the ATG14-containing PtdIns3K-C1 complex and thus autophagy initiation. A K35R mutation or TRIM21 deficiency impairs RBM38c ubiquitination, preventing autophagy activation upon DNA damage. Moreover, RBM38c-driven autophagy protects cells from DNA damage-induced apoptosis and promotes survival, with this beneficial effect susceptible to suppression by the autophagy inhibitor 3-methyladenine. Consequently, depleting RBM38c enhances the efficacy of DNA-damaging drugs by impairing autophagy and increasing DNA damage. Clinical lung cancer samples show a positive correlation between RBM38c expression and LC3 expression, and this correlation is linked to chemotherapy resistance. Together, our study reveals a novel mechanism for DNA damage-induced autophagy, involving K63-linked ubiquitination of RBM38c as a critical interactor with BECN1.</p>","PeriodicalId":9731,"journal":{"name":"Cell Death and Differentiation","volume":"41 1","pages":""},"PeriodicalIF":12.4,"publicationDate":"2025-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143703191","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
NAT10-mediated N4-acetylcytidine modification in KLF9 mRNA promotes adipogenesis NAT10 介导的 KLF9 mRNA 中的 N4-乙酰胞嘧啶修饰可促进脂肪生成
IF 12.4 1区 生物学
Cell Death and Differentiation Pub Date : 2025-03-23 DOI: 10.1038/s41418-025-01483-x
Xinxing Wan, Linghao Wang, Md Asaduzzaman Khan, Lin Peng, Xiaoying Sun, Xuan Yi, Zhouqi Wang, Ke Chen
{"title":"NAT10-mediated N4-acetylcytidine modification in KLF9 mRNA promotes adipogenesis","authors":"Xinxing Wan, Linghao Wang, Md Asaduzzaman Khan, Lin Peng, Xiaoying Sun, Xuan Yi, Zhouqi Wang, Ke Chen","doi":"10.1038/s41418-025-01483-x","DOIUrl":"https://doi.org/10.1038/s41418-025-01483-x","url":null,"abstract":"<p>Dysfunctional adipogenesis is a major contributor of obesity. N-acetyltransferase 10 (NAT10) plays a crucial role in regulating N4-acetylcysteine (ac4C) modification in tRNA, 18SrRNA, and mRNA. As the sole “writer” in the ac4C modification process, NAT10 enhances mRNA stability and translation efficiency. There are few reports on the relationship between NAT10 and adipogenesis, as well as obesity. Our study revealed a significant upregulation of NAT10 in adipose tissues of obese individuals and high-fat diet-fed mice. Furthermore, our findings revealed that the overexpression of NAT10 promotes adipogenesis, while its silencing inhibits adipogenesis in both human adipose tissue-derived stem cells (hADSCs) and 3T3-L1 cells. These results indicate the intimate relationship between NAT10 and obesity. After silencing mouse NAT10 (mNAT10), we identified 30 genes that exhibited both hypo-ac4C modification and downregulation in their expression, utilizing a combined approach of acRIP-sequencing (acRIP-seq) and RNA-sequencing (RNA-seq). Among these genes, we validated KLF9 as a target of NAT10 through acRIP-PCR. KLF9, a pivotal transcription factor that positively regulates adipogenesis. Our findings showed that NAT10 enhances the stability of KLF9 mRNA and further activates the CEBPA/B-PPARG pathway. Furthermore, a dual-luciferase reporter assay demonstrated that NAT10 can bind to three motifs of mouse KLF9 and one motif of human KLF9. In vivo studies revealed that adipose tissue-targeted mouse AAV-NAT10 (AAV-shRNA-mNAT10) inhibits adipose tissue expansion in mice. Additionally, Remodelin, a specific NAT10 inhibitor, significantly reduced body weight, adipocyte size, and adipose tissue expansion in high-fat diet-fed mice by inhibiting KLF9 mRNA ac4C modification. These findings provide novel insights and experimental evidence of the prevention and treatment of obesity, highlighting NAT10 and its downstream targets as potential therapeutic targets.</p>","PeriodicalId":9731,"journal":{"name":"Cell Death and Differentiation","volume":"27 1","pages":""},"PeriodicalIF":12.4,"publicationDate":"2025-03-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143675230","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cryo-EM structure of the brine shrimp mitochondrial ATP synthase suggests an inactivation mechanism for the ATP synthase leak channel 盐水虾线粒体ATP合酶的低温电镜结构揭示了ATP合酶泄漏通道的失活机制
IF 12.4 1区 生物学
Cell Death and Differentiation Pub Date : 2025-03-19 DOI: 10.1038/s41418-025-01476-w
Amrendra Kumar, Juliana da Fonseca Rezende e Mello, Yangyu Wu, Daniel Morris, Ikram Mezghani, Erin Smith, Stephane Rombauts, Peter Bossier, Juno Krahn, Fred J. Sigworth, Nelli Mnatsakanyan
{"title":"Cryo-EM structure of the brine shrimp mitochondrial ATP synthase suggests an inactivation mechanism for the ATP synthase leak channel","authors":"Amrendra Kumar, Juliana da Fonseca Rezende e Mello, Yangyu Wu, Daniel Morris, Ikram Mezghani, Erin Smith, Stephane Rombauts, Peter Bossier, Juno Krahn, Fred J. Sigworth, Nelli Mnatsakanyan","doi":"10.1038/s41418-025-01476-w","DOIUrl":"https://doi.org/10.1038/s41418-025-01476-w","url":null,"abstract":"<p>Mammalian mitochondria undergo Ca<sup>2+</sup>-induced and cyclosporinA (CsA)-regulated permeability transition (mPT) by activating the mitochondrial permeability transition pore (mPTP) situated in mitochondrial inner membranes. Ca<sup>2+</sup>-induced prolonged openings of mPTP under certain pathological conditions result in mitochondrial swelling and rupture of the outer membrane, leading to mitochondrial dysfunction and cell death. While the exact molecular composition and structure of mPTP remain unknown, mammalian ATP synthase was reported to form voltage and Ca<sup>2+</sup>-activated leak channels involved in mPT. Unlike in mammals, mitochondria of the crustacean <i>Artemia franciscana</i> have the ability to accumulate large amounts of Ca<sup>2+</sup> without undergoing the mPT. Here, we performed structural and functional analysis of <i>A. franciscana</i> ATP synthase to study the molecular mechanism of mPTP inhibition in this organism. We found that the channel formed by the <i>A. franciscana</i> ATP synthase dwells predominantly in its inactive state and is insensitive to Ca<sup>2+</sup>, in contrast to porcine heart ATP synthase. Single-particle cryo-electron microscopy (cryo-EM) analysis revealed distinct structural features in <i>A. franciscana</i> ATP synthase compared with mammals. The stronger density of the e-subunit C-terminal region and its enhanced interaction with the c-ring were found in <i>A. franciscana</i> ATP synthase. These data suggest an inactivation mechanism of the ATP synthase leak channel and its possible contribution to the lack of mPT in this organism.</p>","PeriodicalId":9731,"journal":{"name":"Cell Death and Differentiation","volume":"56 1","pages":""},"PeriodicalIF":12.4,"publicationDate":"2025-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143661412","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correction to: Hsp27 silencing coordinately inhibits proliferation and promotes Fas-induced apoptosis by regulating the PEA-15 molecular switch. 修正:Hsp27沉默通过调节PEA-15分子开关,协同抑制fas诱导的细胞增殖和促进细胞凋亡。
IF 13.7 1区 生物学
Cell Death and Differentiation Pub Date : 2025-03-17 DOI: 10.1038/s41418-025-01478-8
N Hayashi, J W Peacock, E Beraldi, A Zoubeidi, M E Gleave, C J Ong
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