{"title":"Eliminating the barriers to cataract surgical access amongst resource-poor communities - a proposed randomised controlled trial","authors":"Osamudiamen Obasuyi","doi":"10.3897/rio.9.e96576","DOIUrl":"https://doi.org/10.3897/rio.9.e96576","url":null,"abstract":"The sustainable development goals (SDGs) of providing universal health coverage for all and ending poverty by 2030 aim to make healthcare accessible and available for all, irrespective of status, gender or race. Unfortunately, access to universal healthcare is still hampered by preventable inequalities, especially amongst the Low-Middle income countries (LMICs).\u0000 Cataracts are the leading cause of preventable blindness globally, affecting over 17 million people; 80% of these people reside in the LMICs and cost-effective cataract surgery is the only way to treat it. However, barriers exist that prevent access to cataract surgery amongst these people. Despite widespread reports of these barriers to cataract surgical access, the complex relationships between the barriers and cataract surgical access have yet to be fully explored by researchers or policy-makers.\u0000 A randomised control trial involving three groups is proposed and presented in this paper to test the relationship between well-known barriers to cataract surgical access in resource-poor communities and programmes designed to overcome them.","PeriodicalId":92718,"journal":{"name":"Research ideas and outcomes","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-04-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45144659","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Michael B Boehmler, Heidi L Murray, D. Demay, A. Rogers, L. Hribar
{"title":"Dataset for mosquitoes (Diptera, Culicidae) from State Route 905-Mile Marker 2, Key Largo, Monroe County, Florida, USA","authors":"Michael B Boehmler, Heidi L Murray, D. Demay, A. Rogers, L. Hribar","doi":"10.3897/rio.9.e101286","DOIUrl":"https://doi.org/10.3897/rio.9.e101286","url":null,"abstract":"The Florida Keys Mosquito Control District has used dry ice-baited light traps to monitor mosquito populations on Key Largo since 2003. This paper describes the methodology of trapping, the habitat and the dataset of adult mosquito populations from 18 years of weekly monitoring from a single site on Key Largo, Monroe County, FL, USA.\u0000 This data paper provides previously unpublished data from a single trapping location in Key Largo, Florida. Two new species have been added to previously-published data from this trapping site.","PeriodicalId":92718,"journal":{"name":"Research ideas and outcomes","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47483171","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tamara Heck, Isabel Steinhardt, R. Rahal, M. Schubotz, D. Scholl, Sarah Behrens
{"title":"Bootstrapping the Open Science culture: The fellowship approach","authors":"Tamara Heck, Isabel Steinhardt, R. Rahal, M. Schubotz, D. Scholl, Sarah Behrens","doi":"10.3897/rio.9.e103675","DOIUrl":"https://doi.org/10.3897/rio.9.e103675","url":null,"abstract":"<jats:p />","PeriodicalId":92718,"journal":{"name":"Research ideas and outcomes","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-03-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45517721","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Anton Andreev, G. Cattan, S. Chevallier, Quentin Barthélemy
{"title":"pyRiemann-qiskit: A Sandbox for Quantum Classification Experiments with Riemannian Geometry","authors":"Anton Andreev, G. Cattan, S. Chevallier, Quentin Barthélemy","doi":"10.3897/rio.9.e101006","DOIUrl":"https://doi.org/10.3897/rio.9.e101006","url":null,"abstract":"Quantum computing is a promising technology for machine learning, in terms of computational costs and outcomes. In this work, we intend to provide a framework that facilitates the use of quantum machine learning in the domain of brain-computer interfaces – where biomedical signals, such as brain waves, are processed.\u0000 To this end, we integrated Qiskit, a well-known quantum library, with pyRiemann, a framework for the analysis of biomedical signals using Riemannian Geometry. In this paper, we describe our approach, the main elements of our implementation and our research directions. A key result is the creation of a standardised pipeline (QuantumClassifierWithDefaultRiemannianPipeline) for the binary classification of brain waves. The git repository reported in this paper also contains a complete test suite and examples to guide practitioners. We believe that this software will enable further research on the joint field of brain-computer interfaces and quantum computing.","PeriodicalId":92718,"journal":{"name":"Research ideas and outcomes","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-03-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47479260","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Astrid de Mestier, Daniel Mulcahy, David J. Harris, N. Korotkova, Sarah Long, Eva Häffner, Alan Paton, Edmund Schiller, F. Leliaert, Jacqueline Mackenzie-Dodds, T. Fulcher, G. Ståhls, T. von Rintelen, M. Martín, R. Lücking, China Williams, C. Lyal, A. Güntsch, Heléne Aronsson, M. Castelin, Anna Pielach, P. Poczai, Yolanda Ruiz‐León, Isabel Sanmartin Bastida, M. Thines, Gabriele Droege
{"title":"Policies Handbook on Using Molecular Collections","authors":"Astrid de Mestier, Daniel Mulcahy, David J. Harris, N. Korotkova, Sarah Long, Eva Häffner, Alan Paton, Edmund Schiller, F. Leliaert, Jacqueline Mackenzie-Dodds, T. Fulcher, G. Ståhls, T. von Rintelen, M. Martín, R. Lücking, China Williams, C. Lyal, A. Güntsch, Heléne Aronsson, M. Castelin, Anna Pielach, P. Poczai, Yolanda Ruiz‐León, Isabel Sanmartin Bastida, M. Thines, Gabriele Droege","doi":"10.3897/rio.9.e102908","DOIUrl":"https://doi.org/10.3897/rio.9.e102908","url":null,"abstract":"The access to molecular collections worldwide greatly improves the quality of scientific research by making a growing number of data available for investigation. The efforts on digitisation also aim at facilitating the exchange of material between institutions and researchers that must follow regulations in place and respect best practice. The handbook presented here proposes a workflow to follow to safely exchange materials, in accordance with international laws and legislation. We make numerous recommendations here to help the institutions and researchers to navigate the legal and administrative procedures, in order to manage molecular collections in the best way possible.","PeriodicalId":92718,"journal":{"name":"Research ideas and outcomes","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-03-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46842796","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
A. Bucciero, E. Demetrescu, B. Fanini, Alessandra Chirivi, F. Taurino
{"title":"An approach to extend the metadata schema of Zenodo for Cultural Heritage datasets","authors":"A. Bucciero, E. Demetrescu, B. Fanini, Alessandra Chirivi, F. Taurino","doi":"10.3897/rio.9.e93859","DOIUrl":"https://doi.org/10.3897/rio.9.e93859","url":null,"abstract":"In this article, we present an approach designed to extend the metadata schema of the Zenodo data management platform to strengthen the FAIRness of the published dataset. We focus on a bottom-up approach starting from a series of datasets ranging from the 3D digitalisation of monuments and sites to the creation of reconstructive records (including the scientific documentation they are based on), to the implementation of digital storytelling and to the development of open source-based web-apps. We propose the simplest possible set of metadata to be included in the Zenodo platform with the possibility, for the community, to adopt and further develop/modify them. This article will describe in detail the formalisation and the digital formats adopted providing the related metadata templates developed within the projects.","PeriodicalId":92718,"journal":{"name":"Research ideas and outcomes","volume":"1 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-03-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41362002","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
D. Migliorini, M. Auger-Rozenberg, A. Battisti, E. Brockerhoff, R. Eschen, Jianting Fan, H. Jactel, C. Orazio, T. Paap, S. Prospero, L. Ren, M. Kenis, A. Roques, A. Santini
{"title":"Towards a global sentinel plants research strategy to prevent new introductions of non-native pests and pathogens in forests. The experience of HOMED","authors":"D. Migliorini, M. Auger-Rozenberg, A. Battisti, E. Brockerhoff, R. Eschen, Jianting Fan, H. Jactel, C. Orazio, T. Paap, S. Prospero, L. Ren, M. Kenis, A. Roques, A. Santini","doi":"10.3897/rio.9.e96744","DOIUrl":"https://doi.org/10.3897/rio.9.e96744","url":null,"abstract":"The use of sentinel woody plants in experimental plantings, Botanical Gardens and Arboreta has been experimentally validated as a tool for identifying possible unknown future threats prior to their introduction into new countries. Sentinel Plantings were recently established in Italy, France, Switzerland, China and South Africa, using a common experimental design. The plantings included various tree and shrub species of broadleaves and conifers. Two planting types were established, each with different objectives. In-patria plantings using native plants aim to estimate, in absence of any phytosanitary treatments, the associations and infestation rates of native insects susceptible to be exported to other countries with that particular commodity. Ex-patria plantings using non-native plants are relevant to identify native insect species capable of switching to the non-native plant that would otherwise be impossible to predict prior to its introduction. In the frame of the EU project HOMED, we have implemented this concept, widening the use of this tool simultaneously to many different countries and continents","PeriodicalId":92718,"journal":{"name":"Research ideas and outcomes","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-03-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42630810","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Hackathons and other participatory open science formats","authors":"Gabriele Fahrenkrog, Lambert Heller, Ina Blümel","doi":"10.3897/rio.9.e94851","DOIUrl":"https://doi.org/10.3897/rio.9.e94851","url":null,"abstract":"This paper aims to provide a structured overview of four open, participatory formats that are particularly applicable in inquiry-based teaching and learning contexts: hackathons, book sprints, barcamps, and learning circles. Using examples, mostly from the work and experience context of the Open Science Lab at TIB Hannover, we address concrete processes, working methods, possible outcomes and challenges.\u0000 The compilation offers an introduction to the topic and is intended to provide tools for testing in practice.","PeriodicalId":92718,"journal":{"name":"Research ideas and outcomes","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49407167","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
P. Gundersen, Т. M. Bezemer, S. Rojas, L. Tedersoo, L. Vesterdal, I. Schmidt
{"title":"Silva Nova – Restoring soil biology and soil functions to gain multiple benefits in new forests","authors":"P. Gundersen, Т. M. Bezemer, S. Rojas, L. Tedersoo, L. Vesterdal, I. Schmidt","doi":"10.3897/rio.9.e101455","DOIUrl":"https://doi.org/10.3897/rio.9.e101455","url":null,"abstract":"Afforestation is proposed as one of the most effective climate solutions for carbon sequestration. As a majority of threatened species are linked to forests, afforestation can also contribute to mitigate the biodiversity crisis. There is however a caveat: the agricultural legacy (high nutrient availability, altered soil biota structure and function) of new forests constrains the development of forest-adapted species, affects tree growth and stability, and delays environmental benefits from afforestation.\u0000 We hypothesize that inoculation of former arable land with soil (including microbiome, fauna and seeds/rhizomes of understory vegetation) from old forests along with targeted tree species mixtures will improve productivity and more rapidly restore forest-adapted communities. This will ultimately result in diverse, stable and resilient multifunctional forests.\u0000 We will test this hypothesis and develop applied inoculation methods by: i) exploring soil biota and benchmarking biodiversity in existing afforestation research Chronosequence platforms (chronosequences and sites with increasing distance to other forests); ii) conducting inoculation experiments in mesocosms to measure seedling performance and, above- and belowground linkages; iii) establishing field-scale inoculation experiments in new and existing afforestations to test short- and long-term inoculation success on forest productivity, biodiversity and soil functioning at the ecosystem scale; iv) incorporating the landscape context into guidelines and tools for spatially explicit prioritization of areas for assisted dispersal.\u0000 The aims are to resolve barriers for successful restoration and develop landscape-scale afforestation strategies that optimize productivity and biodiversity for the planning and implementation of green infrastructure; and produce basic knowledge on the tree, understory vegetation, soil fauna and microbiome nexus and its effect on forest productivity, biodiversity and soil functions (N-retention, C-sequestration, methane uptake).","PeriodicalId":92718,"journal":{"name":"Research ideas and outcomes","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44666080","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Étienne Serbe-Kamp, Jens Bemme, D. Pollak, Katja Mayer
{"title":"Open Citizen Science: fostering open knowledge with participation","authors":"Étienne Serbe-Kamp, Jens Bemme, D. Pollak, Katja Mayer","doi":"10.3897/rio.9.e96476","DOIUrl":"https://doi.org/10.3897/rio.9.e96476","url":null,"abstract":"Citizen Science or community science has been around for a long time. The scope of community involvement in Citizen Science initiatives ranges from short-term data collection to intensive engagement to delve into a research topic together with scientists and/or other volunteers. Although many volunteer researchers have academic training, it is not a prerequisite for participation in research projects. It is important to adhere to scientific standards, which include, above all, transparency with regard to the methodology of data collection and public discussion of the results, and open educational resources (OER). Hereby, Citizen Science is closely linked to Open Science. In our contribution, we will introduce two projects, both developed within the Wikimedia Fellowship Freies Wissen.\u0000 The top-down approach: ERGo! An Entomology Research Tool to raise awareness of biodiversity protection.\u0000 Inclusion in academia and pressing social problems such as climate change are fundamentally social justice issues. To facilitate early participation in the scientific process on the part of people holding underrepresented identities in science, we develop a Citizen Science initiative based on a low-cost open-source platform (ERGo!) to perform a technique for electrical recordings from insect eyes known as electroretinograms (ERGs) while presenting visual stimuli. Pasadena Unified School District High School students pilot ERG experiments to test the feasibility of this technique as a large-scale Citizen Science initiative. With ERGo!, future Citizen Scientists contribute data to cutting-edge research that monitors insect biodiversity, adaptation, and health in rapidly changing environments caused by monocultures, pesticides, and climate change.\u0000 The bottom-up approach: Open cultural data collection. A Citizen Science initiative for regional knowledge curation.\u0000 We catalogued the 18th century German magazine ‘Die Gartenlaube’ (in Wikisource) with bibliographic metadata in Wikidata in a project called ‘Die Datenlaube’. We develop collaborative approaches for linked open data methods to produce data sets about historical knowledge. The concept of ‘Open Citizen Science’ offers a methodological baseline for Open Science practises in fields of digital humanities. Scanned documents and structured open metadata revealed open access to historic collections. Through the Wikimedia platforms 'Die Datenlaube' creates possibilities to edit entries, to design own investigations, and to contribute to OER.\u0000 Based on the elaboration of the two rather different projects (natural and social sciences, involvement of pupils vs citizens, top-down vs bottom-up), we will discuss similarities and hence the challenges and lessons learned for using and developing Open Science elements in Citizen Science and mutual learning. Furthermore, we will conclude by focusing on the opportunities resulting from the integration of societal expectations in science and vice versa.","PeriodicalId":92718,"journal":{"name":"Research ideas and outcomes","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48410358","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}