{"title":"Rot1, an essential yeast protein, is degraded through the ER-associated protein degradation system (ERAD)","authors":"M. Juanes, C. Martínez-Garay, M. Bañó","doi":"10.14304/SURYA.JPR.V5N11.2","DOIUrl":"https://doi.org/10.14304/SURYA.JPR.V5N11.2","url":null,"abstract":"S. cerevisiae ROT1 is an essential gene which has been related to cell wall biosynthesis, the actin cytoskeleton and protein folding. Rot1 protein is primarily located at the endoplasmic reticulumnuclear membrane facing the lumen where it is translocated through two internal topogenic elements by an SRP-independent posttranslational mechanism which depends on Sec62 to then be N-glycosylated at the lumen of the ER. Despite Rot1 protein levels are critical for yeast survival, proper cell cycle progression and morphogenesis, Rot1 protein levels has not been investigated so far. Here we carry out an in vivo study to analyse the Rot1 protein levels and show that Rot1 is a short-lived protein and its turnover is mediated by the ubiquitin proteasome system (UPS), dependent on the main degradation pathway located at the ER, the ER-associated degradation system (ERAD). This finding correlates with genetic interactions we previously found and that suggested a link between Rot1 and the ubiquitin-proteasome system. In addition, by using mutant cells components of the ERAD pathway, we demonstrated that Rot1 is degraded through the ubiquitin conjugating enzymes (E2) components of ERAD, Ubc6 and Ubc7, and it seems to require only one of the E3 ubiquitin ligases involved in ERAD, Hrd1 but not Doa1.","PeriodicalId":90946,"journal":{"name":"Postdoc journal : a journal of postdoctoral research and postdoctoral affairs","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41774987","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Targeting DNA repair as cancer therapy: TLS comes into focus","authors":"Jia Zhou","doi":"10.14304/SURYA.JPR.V5N9.1","DOIUrl":"https://doi.org/10.14304/SURYA.JPR.V5N9.1","url":null,"abstract":"","PeriodicalId":90946,"journal":{"name":"Postdoc journal : a journal of postdoctoral research and postdoctoral affairs","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41360583","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
W. Mandala, Amelia Challender, M. Maimbolwa, E. Gomo, M. Nyirenda, F. Cowan, Susan C. Connors
{"title":"Understanding the Potential Barriers and Facilitators for Enrolling Postdoctoral Fellows: A Case Study of Medical Colleges in Malawi, Zambia, and Zimbabwe","authors":"W. Mandala, Amelia Challender, M. Maimbolwa, E. Gomo, M. Nyirenda, F. Cowan, Susan C. Connors","doi":"10.14304/SURYA.JPR.V5N9.3","DOIUrl":"https://doi.org/10.14304/SURYA.JPR.V5N9.3","url":null,"abstract":"In many countries, aspiring researchers compete for post-doctoral fellowships after PhD studies. The Southern Africa Consortium of Research Excellence (SACORE) had aimed to enrol eight post-doctoral fellows in the first phase but only appointed one. This study was conducted to explore barriers and potential facilitators for enrolment of post-doctoral fellows at three African schools of medicine. Individual interviews were conducted with 32 stakeholders from College of Medicine, Malawi; University of Zambia, School of Medicine; and University of Zimbabwe, College of Health Sciences. Interviewees included: university leaders and faculty (n = 15), Ministry leaders (n = 5), eligible fellowship candidates (n = 11), and a post-doctoral fellow (n = 1). Interview guides were developed for each stakeholder group; interviews were recorded, transcribed verbatim and coded for key themes. Post-doctoral fellowships were identified as potentially beneficial financially and for academic career development. Institutions felt they could benefit by developing relevant research, increasing the pool of mentors, and future research leaders. Lack of suitably qualified applicants and economic constraints of academia were the main challenges to recruitment. Post-doctoral fellowships benefits for individuals, institutions and countries, and the need to improve the recruitment process as well as to define research career pathways, were isolated.","PeriodicalId":90946,"journal":{"name":"Postdoc journal : a journal of postdoctoral research and postdoctoral affairs","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46027988","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Cyanobacterial biofactories: combining evolved and synthetic genetic regulatory mechanisms to yield carbon-neutral bioproducts","authors":"L. A. Brand, G. Owttrim","doi":"10.14304/SURYA.JPR.V5N7.4","DOIUrl":"https://doi.org/10.14304/SURYA.JPR.V5N7.4","url":null,"abstract":"While cyanobacteria hold the promise of producing useful bioproducts from little more than sunlight and carbon dioxide, their economic feasibility hinges on developing better mechanisms to manipulate gene expression in order to divert photosynthate towards product formation. A recent report demonstrates how combining simple feedback loops can improve the dynamic range of target gene expression while utilizing progressively lower concentrations of chemical inducers. As an extension of this work, we propose that utilizing regulatory elements that respond to changing temperatures could circumvent the need for exogenous chemical inducers, maintaining low background expression under non-induced conditions, and enhancing dynamic range via temperature induction of cyanobacterial cultures on an industrial scale.","PeriodicalId":90946,"journal":{"name":"Postdoc journal : a journal of postdoctoral research and postdoctoral affairs","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41579900","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Natural Killer Cells in Cancer: An Overview","authors":"A. Rao, N. Amankulor","doi":"10.14304/SURYA.JPR.V5N9.4","DOIUrl":"https://doi.org/10.14304/SURYA.JPR.V5N9.4","url":null,"abstract":"","PeriodicalId":90946,"journal":{"name":"Postdoc journal : a journal of postdoctoral research and postdoctoral affairs","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43945804","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"EDITORIAL: Metal Hydrides as Catalytic Intermediates","authors":"Sarah R Soltau","doi":"10.14304/SURYA.JPR.V5N7.1","DOIUrl":"https://doi.org/10.14304/SURYA.JPR.V5N7.1","url":null,"abstract":"","PeriodicalId":90946,"journal":{"name":"Postdoc journal : a journal of postdoctoral research and postdoctoral affairs","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41673589","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Metal Hydrides as Catalytic Intermediates: The Curious Case of Iron Carbonyl Clusters","authors":"Atefeh Taheri, Louise A. Berben","doi":"10.14304/SURYA.JPR.V5N7.2","DOIUrl":"https://doi.org/10.14304/SURYA.JPR.V5N7.2","url":null,"abstract":"Here, we discuss recent efforts during the last 5 years for the development of molecular electrocatalysts involving metal hydride intermediates with particular attention to iron carbonyl clusters. This review begins with a brief description of thermodynamic properties (hydricity) of metal hydride intermediates and methods of hydricity measurements, specifically for iron carbonyl clusters. We then discuss two important reactions by iron carbonyl clusters relevant to solar fuel catalysis: electrocatalytic reduction of CO2 to formate and proton reduction to hydrogen. These examples are included because they provide valuable mechanistic insights into the design of catalysts that produce hydrogenated products selectively from CO2.","PeriodicalId":90946,"journal":{"name":"Postdoc journal : a journal of postdoctoral research and postdoctoral affairs","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44610654","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Translesion Synthesis: An emerging new target during chemotherapy","authors":"C. Harris, Nimrat Chatterjee","doi":"10.14304/SURYA.JPR.V5N9.2","DOIUrl":"https://doi.org/10.14304/SURYA.JPR.V5N9.2","url":null,"abstract":"Translesion synthesis (TLS) is an important mechanism where a group of polymerases come together to orchestrate the bypass of aberrant DNA lesions. This process enables survival of those cells, which would have otherwise been committed to die because of these difficult to repair DNA lesions. Interestingly, siRNA knockdown of TLS polymerases in cancer cells was shown to sensitize cells to increased killing and reduced mutagenesis following treatment with chemotherapeutic drugs, which suggests an important role of TLS polymerases in chemoresistance and cancer relapse. Recent investigations showed that small molecule inhibitors (SMi) that specifically bind REV1 TLS polymerases and suppressed its protein-protein interactions with other TLS polymerases, also successfully sensitized cancer cells to enhanced killing and reduced mutagenesis. As such, the possibility of a SMi that specifically binds REV1 and inhibits TLS, will serve as a chemotherapy adjuvant and prevent chemoresistance and cancer relapse is now a promising possibility. In this mini-review, we will provide a brief discourse of the overarching importance of TLS polymerases in normal and cancer cells and describe characteristics of current and future TLS inhibitors that will potentially serve as clinical chemotherapeutic adjuvants.","PeriodicalId":90946,"journal":{"name":"Postdoc journal : a journal of postdoctoral research and postdoctoral affairs","volume":"20 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"67014799","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Role of the Spindle and kinetochore associated (Ska) protein complex in mitotic progression","authors":"Sushama Sivakumar","doi":"10.14304/SURYA.JPR.V5N9.6","DOIUrl":"https://doi.org/10.14304/SURYA.JPR.V5N9.6","url":null,"abstract":"The Spindle and Kinetochore Associated (Ska) protein complex is a heterotrimeric complex involved in mitotic progression. Depletion of Ska1, Ska2 or Ska3 by RNAi causes delays in chromosome alignment followed by a long metaphase arrest that results in Cohesion fatigue. Ska1 and Ska3 have been shown to bind microtubules both in vitro and in vivo. Ska1 directly recruits the protein phosphatase PP1 to kinetochores during mitosis. The Ska complex has also been implicated is regulating the localization of Anaphase promoting complex/cyclosome (APC/C) to chromosomes. Aurora B kinase has been shown to phosphorylate and regulate kinetochore recruitment of Ska proteins. The Ska complex, in addition to being substrate of Aurora B, also directly activates Aurora B and regulates kinetochore microtubule stability to ensure proper chromosome bi-orientation. The master mitotic kinase Cdk1 phosphorylates Ska3 and regulates Ska complex localization to kinetochores. Cdk1 kinase does not affect spindle localization of the Ska complex suggesting that distinct pathways exist to recruit Ska complex to defined mitotic substructures. Herein we discuss these findings and postulate their implications on Ska complex function during mitosis.","PeriodicalId":90946,"journal":{"name":"Postdoc journal : a journal of postdoctoral research and postdoctoral affairs","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47900242","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Research Highlight: Revealing molecular mechanism behind the effect of Zika Virus infection on neurodevelopment","authors":"Parikshit Bagchi","doi":"10.14304/SURYA.JPR.V5N7.5","DOIUrl":"https://doi.org/10.14304/SURYA.JPR.V5N7.5","url":null,"abstract":"","PeriodicalId":90946,"journal":{"name":"Postdoc journal : a journal of postdoctoral research and postdoctoral affairs","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44718906","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}