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Competition between biodetoxification fungus and lactic acid bacterium in the biorefinery processing chain for production of cellulosic L-lactic acid. 生物氧化真菌和乳酸菌在生产纤维素 L-乳酸的生物精炼加工链中的竞争。
IF 4.6 3区 生物学
Bioresources and Bioprocessing Pub Date : 2024-05-23 DOI: 10.1186/s40643-024-00772-6
Zhibin Li, Lingxiao Zhang, Niling He, Bin Zhang, Jie Bao
{"title":"Competition between biodetoxification fungus and lactic acid bacterium in the biorefinery processing chain for production of cellulosic L-lactic acid.","authors":"Zhibin Li, Lingxiao Zhang, Niling He, Bin Zhang, Jie Bao","doi":"10.1186/s40643-024-00772-6","DOIUrl":"10.1186/s40643-024-00772-6","url":null,"abstract":"<p><p>Biodetoxification fungus selectively degrades toxic inhibitors generated from pretreatment of lignocellulose without consuming fermentable sugars. However, one barrier for practical application is the sustained cell viability in the consequent fermentation step to compete the fermentable sugars with fermenting strains, resulting in sugar loss and reduced target product yield. This study investigated the competitive growth property between the biodetoxification fungus Paecilomyces variotii FN89 and the L-lactic acid bacterium Pediococcus acidilactici ZY271 under varying temperature and lactic acid osmatic stress. The results show that the L-lactic acid bacterium Ped. acidilactici ZY271 showed less thermotolerance to Pae. variotii FN89 at high temperature of 45 °C to 50 °C in both synthetic medium and wheat straw hydrolysate. In the higher temperature environment, the growth of the biodetoxification strian failed to compete with the lactic acid fermentation strain and was quickly eliminated from the fermentation system. The high temperature fermentation facilitated a fast transition from the detoxification stage to the fermentation stage for higher production of L-lactic acid.</p>","PeriodicalId":9067,"journal":{"name":"Bioresources and Bioprocessing","volume":"11 1","pages":"54"},"PeriodicalIF":4.6,"publicationDate":"2024-05-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11116323/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141080522","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-cell one-pot biosynthesis of dodecanedioic acid from renewable linoleic acid. 从可再生亚油酸全细胞一步法生物合成十二烷二酸。
IF 4.6 3区 生物学
Bioresources and Bioprocessing Pub Date : 2024-05-23 DOI: 10.1186/s40643-024-00770-8
Yi-Ke Qi, Jiang Pan, Zhi-Jun Zhang, Jian-He Xu
{"title":"Whole-cell one-pot biosynthesis of dodecanedioic acid from renewable linoleic acid.","authors":"Yi-Ke Qi, Jiang Pan, Zhi-Jun Zhang, Jian-He Xu","doi":"10.1186/s40643-024-00770-8","DOIUrl":"10.1186/s40643-024-00770-8","url":null,"abstract":"<p><strong>Background: </strong>Dodecanedioic acid (DDA), a typical medium-chain dicarboxylic fatty acid with widespread applications, has a great synthetic value and a huge industrial market demand. Currently, a sustainable, eco-friendly and efficient process is desired for dodecanedioic acid production.</p><p><strong>Results: </strong>Herein, a multi-enzymatic cascade was designed and constructed for the production of DDA from linoleic acid based on the lipoxygenase pathway in plants. The cascade is composed of lipoxygenase, hydroperoxide lyase, aldehyde dehydrogenase, and unidentified double-bond reductase in E. coli for the main cascade reactions, as well as NADH oxidase for cofactor recycling. The four component enzymes involved in the cascade were co-expressed in E. coli, together with the endogenous double-bond reductase of E. coli. After optimizing the reaction conditions of the rate-limiting step, 43.8 g L<sup>- 1</sup> d<sup>- 1</sup> of DDA was obtained by a whole-cell one-pot process starting from renewable linoleic acid.</p><p><strong>Conclusions: </strong>Through engineering of the reaction system and co-expressing the component enzymes, a sustainable and eco-friendly DDA biosynthesis route was set up in E. coli, which afforded the highest space time yield for DDA production among the current artificial multi-enzymatic routes derived from the LOX-pathway, and the productivity achieved here ranks the second highest among the current research progress in DDA biosynthesis.</p>","PeriodicalId":9067,"journal":{"name":"Bioresources and Bioprocessing","volume":"11 1","pages":"55"},"PeriodicalIF":4.6,"publicationDate":"2024-05-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11116355/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141080569","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Network pharmacology and molecular docking: combined computational approaches to explore the antihypertensive potential of Fabaceae species. 网络药理学和分子对接:探索豆科植物抗高血压潜力的组合计算方法。
IF 4.6 3区 生物学
Bioresources and Bioprocessing Pub Date : 2024-05-20 DOI: 10.1186/s40643-024-00764-6
Zainab Shahzadi, Zubaida Yousaf, Irfan Anjum, Muhammad Bilal, Hamna Yasin, Arusa Aftab, Anthony Booker, Riaz Ullah, Ahmed Bari
{"title":"Network pharmacology and molecular docking: combined computational approaches to explore the antihypertensive potential of Fabaceae species.","authors":"Zainab Shahzadi, Zubaida Yousaf, Irfan Anjum, Muhammad Bilal, Hamna Yasin, Arusa Aftab, Anthony Booker, Riaz Ullah, Ahmed Bari","doi":"10.1186/s40643-024-00764-6","DOIUrl":"10.1186/s40643-024-00764-6","url":null,"abstract":"<p><p>Hypertension is a major global public health issue, affecting quarter of adults worldwide. Numerous synthetic drugs are available for treating hypertension; however, they often come with a higher risk of side effects and long-term therapy. Modern formulations with active phytoconstituents are gaining popularity, addressing some of these issues. This study aims to discover novel antihypertensive compounds in Cassia fistula, Senna alexandrina, and Cassia occidentalis from family Fabaceae and understand their interaction mechanism with hypertension targeted genes, using network pharmacology and molecular docking. Total 414 compounds were identified; initial screening was conducted based on their pharmacokinetic and ADMET properties, with a particular emphasis on adherence to Lipinski's rules. 6 compounds, namely Germichrysone, Benzeneacetic acid, Flavan-3-ol, 5,7,3',4'-Tetrahydroxy-6, 8-dimethoxyflavon, Dihydrokaempferol, and Epiafzelechin, were identified as effective agents. Most of the compounds found non-toxic against various indicators with greater bioactivity score. 161 common targets were obtained against these compounds and hypertension followed by compound-target network construction and protein-protein interaction, which showed their role in diverse biological system. Top hub genes identified were TLR4, MMP9, MAPK14, AKT1, VEGFA and HSP90AA1 with their respective associates. Higher binding affinities was found with three compounds Dihydrokaempferol, Flavan-3-ol and Germichrysone, -7.1, -9.0 and -8.0 kcal/mol, respectively. The MD simulation results validate the structural flexibility of two complexes Flavan-MMP9 and Germich-TLR4 based on no. of hydrogen bonds, root mean square deviations and interaction energies. This study concluded that C. fistula (Dihydrokaempferol, Flavan-3-ol) and C. occidentalis (Germichrysone) have potential therapeutic active constituents to treat hypertension and in future novel drug formulation.</p>","PeriodicalId":9067,"journal":{"name":"Bioresources and Bioprocessing","volume":"11 1","pages":"53"},"PeriodicalIF":4.6,"publicationDate":"2024-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11106056/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141064733","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Acid-catalyzed transformation of orange waste into furfural: the effect of pectin degree of esterification. 酸催化橙废料转化为糠醛:果胶酯化程度的影响。
IF 4.3 3区 生物学
Bioresources and Bioprocessing Pub Date : 2024-05-20 DOI: 10.1186/s40643-024-00768-2
Eva E Rivera-Cedillo, Marco M González-Chávez, Brent E Handy, María F Quintana-Olivera, Janneth López-Mercado, María-Guadalupe Cárdenas-Galindo
{"title":"Acid-catalyzed transformation of orange waste into furfural: the effect of pectin degree of esterification.","authors":"Eva E Rivera-Cedillo, Marco M González-Chávez, Brent E Handy, María F Quintana-Olivera, Janneth López-Mercado, María-Guadalupe Cárdenas-Galindo","doi":"10.1186/s40643-024-00768-2","DOIUrl":"10.1186/s40643-024-00768-2","url":null,"abstract":"<p><p>The transformation of biomasses from agro-industrial waste can significantly impact the production of green chemicals from sustainable resources. Pectin is a biopolymer present in lignocellulosic biomass as Orange Peel Waste (OPW) and has possibilities for making platform compounds such as furfural for sustainable chemistry. In this work, we studied the transformation to furfural of OPW, pectins, and D-galacturonic acid (D-GalA), which is the main component (65 wt%) of pectin. We analyzed pectins with different degrees of esterification (45, 60 and 95 DE) in a one-pot hydrolysis reaction system and studied the differences in depolymerization and dehydration of the carbohydrates. The results show that the production of furfural decreases as the DE value increases. Specifically, low DE values favor the formation of furfural since the decarboxylation reaction is favored over deesterification. Interestingly, the furfural concentration is dependent upon the polysaccharide composition of pentoses and uronic acid. The obtained concentrations of furfural (13 and 14 mmol/L), D-xylose (6.2 and 10 mmol/L), and L-arabinose (2.5 and 2.7 mmol/L) remained the same when the galacturonic acid was fed either as a polymer or a monomer under the same reaction conditions (0.01 M SA, 90 min and 433 K). OPW is proposed as a feedstock in a biorefinery, in which on a per kg OPW dry basis, 90 g of pectin and 15 g of furfural were produced in the most favorable case. We conclude that the co-production of pectin and furfural from OPW is economically feasible.</p>","PeriodicalId":9067,"journal":{"name":"Bioresources and Bioprocessing","volume":"11 1","pages":"52"},"PeriodicalIF":4.3,"publicationDate":"2024-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11106045/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141064678","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effect of Akkermansia muciniphila on pancreatic islet β-cell function in rats with prediabetes mellitus induced by a high-fat diet. Akkermansia muciniphila 对高脂饮食诱发的糖尿病前期大鼠胰岛β细胞功能的影响
IF 4.6 3区 生物学
Bioresources and Bioprocessing Pub Date : 2024-05-19 DOI: 10.1186/s40643-024-00766-4
Shuai Yan, Lin Chen, Na Li, Xiaohui Wei, Jingjing Wang, Weiping Dong, Yufan Wang, Jianxia Shi, Xiaoying Ding, Yongde Peng
{"title":"Effect of Akkermansia muciniphila on pancreatic islet β-cell function in rats with prediabetes mellitus induced by a high-fat diet.","authors":"Shuai Yan, Lin Chen, Na Li, Xiaohui Wei, Jingjing Wang, Weiping Dong, Yufan Wang, Jianxia Shi, Xiaoying Ding, Yongde Peng","doi":"10.1186/s40643-024-00766-4","DOIUrl":"10.1186/s40643-024-00766-4","url":null,"abstract":"<p><p>Prediabetes is an important stage in the development of diabetes. It is necessary to find a safe, effective and sustainable way to delay and reverse the progression of prediabetes. Akkermansia muciniphila (A. muciniphila) is one of the key bacteria associated with glucose metabolism. Recent studies mainly focus on the effect of A. muciniphila on obesity and insulin resistance, but there is no research on the effect of A. muciniphila on pancreatic β-cell function and its mechanism in prediabetes. In this study, we investigated the effects of A. muciniphila on β-cell function, apoptosis and differentiation, as well as its effects on the gut microbiome, intestinal barrier, metaflammation and the expression of Toll-like receptors (TLRs) in a high-fat diet (HFD)-induced prediabetic rat model. The effect of A. muciniphila was compared with dietary intervention. The results showed both A. muciniphila treatment and dietary intervention can reduce metaflammation by repairing the intestinal barrier in rats with prediabetes induced by an HFD and improve β-cell secretory function, apoptosis and differentiation through signaling pathways mediated by TLR2 and TLR4. Additionally, A. muciniphila can further elevate β-cell secretion, attenuate apoptosis and improve differentiation and the TLR signaling pathway on the basis of diet.</p>","PeriodicalId":9067,"journal":{"name":"Bioresources and Bioprocessing","volume":"11 1","pages":"51"},"PeriodicalIF":4.6,"publicationDate":"2024-05-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11102893/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141064730","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Enhancing the biosynthesis of taxadien-5α-yl-acetate in Escherichia coli by combinatorial metabolic engineering approaches. 通过组合代谢工程方法加强大肠杆菌中 5α-yl-acetate 紫杉二烯醇的生物合成。
IF 4.6 3区 生物学
Bioresources and Bioprocessing Pub Date : 2024-05-16 DOI: 10.1186/s40643-024-00762-8
Wen-Liang Xie, Mei-Fang Zhang, Zheng-Yu Huang, Man Xu, Chun-Xiu Li, Jian-He Xu
{"title":"Enhancing the biosynthesis of taxadien-5α-yl-acetate in Escherichia coli by combinatorial metabolic engineering approaches.","authors":"Wen-Liang Xie, Mei-Fang Zhang, Zheng-Yu Huang, Man Xu, Chun-Xiu Li, Jian-He Xu","doi":"10.1186/s40643-024-00762-8","DOIUrl":"10.1186/s40643-024-00762-8","url":null,"abstract":"<p><p>Biosynthesis of paclitaxel (Taxol™) is a hot topic with extensive and durable interests for decades. However, it is severely hindered due to the very low titers of intermediates. In this study, Escherichia coli was employed to de novo synthesize a key intermediate of paclitaxel, taxadien-5α-yl-acetate (T5OAc). Plasmid-based pathway reconstruction and optimization were conducted for T5OAc production. The endogenous methylerythritol phosphate pathway was enhanced to increase the precursor supply. Three taxadien-5α-ol O-acetyltransferases were tested to obtain the best enzyme for the acetylation step. Metabolic burden was relieved to restore cell growth and promote production through optimizing the plasmid production system. In order to achieve metabolic balance, the biosynthesis pathway was regulated precisely by multivariate-modular metabolic engineering. Finally, in a 5-L bioreactor, the T5OAc titer was enhanced to reach 10.9 mg/L. This represents an approximately 272-fold increase in production compared to the original strain, marking the highest yield of T5OAc ever documented in E. coli, which is believed to be helpful for promoting the progress of paclitaxel biosynthesis.</p>","PeriodicalId":9067,"journal":{"name":"Bioresources and Bioprocessing","volume":"11 1","pages":"50"},"PeriodicalIF":4.6,"publicationDate":"2024-05-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11098985/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140943803","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
An up-scaled biotechnological approach for phosphorus-depleted rye bran as animal feed. 将缺磷黑麦麸皮作为动物饲料的升级生物技术方法。
IF 4.6 3区 生物学
Bioresources and Bioprocessing Pub Date : 2024-05-13 DOI: 10.1186/s40643-024-00765-5
Niklas Widderich, Johanna Stotz, Florian Lohkamp, Christian Visscher, Ulrich Schwaneberg, Andreas Liese, Paul Bubenheim, Anna Joëlle Ruff
{"title":"An up-scaled biotechnological approach for phosphorus-depleted rye bran as animal feed.","authors":"Niklas Widderich, Johanna Stotz, Florian Lohkamp, Christian Visscher, Ulrich Schwaneberg, Andreas Liese, Paul Bubenheim, Anna Joëlle Ruff","doi":"10.1186/s40643-024-00765-5","DOIUrl":"10.1186/s40643-024-00765-5","url":null,"abstract":"<p><p>Side streams from the milling industry offer excellent nutritional properties for animal feed; yet their use is constrained by the elevated phosphorus (P) content, mainly in the form of phytate. Biotechnological P recovery fosters sustainable P management, transforming these streams into P-depleted animal feed through enzymatic hydrolysis. The enzymatic P mobilization not only enables P recovery from milling by-products but also supports the valorization of these streams into P-depleted animal feeds. Our study presents the scalability and applicability of the process and characterizes the resulting P-depleted rye bran as animal feed component. Batch mode investigations were conducted to mobilize P from 100 g to 37.1 kg of rye bran using bioreactors up to 400 L. P reductions of 89% to 92% (reducing from 12.7 g<sub>P</sub>/kg to 1.41-1.28 g<sub>P</sub>/kg) were achieved. In addition, High Performance Ion Chromatography (HPIC) analysis showed complete depletion of phytate. The successful recovery of the enzymatically mobilized P from the process wastewater by precipitation as struvite and calcium hydrogen phosphate is presented as well, achieving up to 99% removal efficiency. Our study demonstrates a versatile process that is easily adaptable, allowing for a seamless implementation on a larger scale.</p>","PeriodicalId":9067,"journal":{"name":"Bioresources and Bioprocessing","volume":"11 1","pages":"49"},"PeriodicalIF":4.6,"publicationDate":"2024-05-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11091026/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140913675","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Scanning the active center of formolase to identify key residues for enhanced C1 to C3 bioconversion. 扫描甲醇酶的活性中心,确定增强 C1 到 C3 生物转化的关键残基。
IF 4.3 3区 生物学
Bioresources and Bioprocessing Pub Date : 2024-05-12 DOI: 10.1186/s40643-024-00767-3
Guimin Cheng, Hongbing Sun, Qian Wang, Jinxing Yang, Jing Qiao, Cheng Zhong, Tao Cai, Yu Wang
{"title":"Scanning the active center of formolase to identify key residues for enhanced C1 to C3 bioconversion.","authors":"Guimin Cheng, Hongbing Sun, Qian Wang, Jinxing Yang, Jing Qiao, Cheng Zhong, Tao Cai, Yu Wang","doi":"10.1186/s40643-024-00767-3","DOIUrl":"10.1186/s40643-024-00767-3","url":null,"abstract":"<p><strong>Background: </strong>Formolase (FLS) is a computationally designed enzyme that catalyzes the carboligation of two or three C1 formaldehyde molecules into C2 glycolaldehyde or C3 dihydroxyacetone (DHA). FLS lays the foundation for several artificial carbon fixation and valorization pathways, such as the artificial starch anabolic pathway. However, the application of FLS is limited by its low catalytic activity and product promiscuity.</p><p><strong>Findings: </strong>FLS, designed and engineered based on benzoylformate decarboxylase from Pseudomonas putida, was selected as a candidate for modification. To evaluate its catalytic activity, 25 residues located within an 8 Å distance from the active center were screened using single-point saturation mutagenesis. A screening approach based on the color reaction of the DHA product was applied to identify the desired FLS variants. After screening approximately 5,000 variants (approximately 200 transformants per site), several amino acid sites that were not identified by directed evolution were found to improve DHA formation. The serine-to-phenylalanine substitution at position 236 improved the activity towards DHA formation by 7.6-fold. Molecular dynamics simulations suggested that the mutation increased local hydrophobicity at the active site, predisposing the cofactor-C2 intermediate to nucleophilic attack by the third formaldehyde molecule for subsequent DHA generation.</p><p><strong>Conclusions: </strong>This study provides improved FLS variants and valuable information into the influence of residues adjacent to the active center affecting catalytic efficiency, which can guide the rational engineering or directed evolution of FLS to optimize its performance in artificial carbon fixation and valorization.</p>","PeriodicalId":9067,"journal":{"name":"Bioresources and Bioprocessing","volume":"11 1","pages":"48"},"PeriodicalIF":4.3,"publicationDate":"2024-05-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11089019/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140911140","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Co-production of 1,3-propanediol and phage phiKpS2 from the glycerol fermentation by Klebsiella pneumoniae. 肺炎克雷伯氏菌在甘油发酵过程中同时产生 1,3-丙二醇和噬菌体 phiKpS2。
IF 4.6 3区 生物学
Bioresources and Bioprocessing Pub Date : 2024-05-09 DOI: 10.1186/s40643-024-00760-w
Suyang Duan, Zhirong Zhang, Xiaoli Wang, Yaqin Sun, Yuesheng Dong, Lina Ren, Lili Geng, Zhilong Xiu
{"title":"Co-production of 1,3-propanediol and phage phiKpS2 from the glycerol fermentation by Klebsiella pneumoniae.","authors":"Suyang Duan, Zhirong Zhang, Xiaoli Wang, Yaqin Sun, Yuesheng Dong, Lina Ren, Lili Geng, Zhilong Xiu","doi":"10.1186/s40643-024-00760-w","DOIUrl":"10.1186/s40643-024-00760-w","url":null,"abstract":"<p><p>As an alternative to antibiotics in response to antimicrobial-resistant infections, bacteriophages (phages) are garnering renewed interest in recent years. However, the massive preparation of phage is restricted using traditional pathogens as host cells, which incurs additional costs and contamination. In this study, an opportunistic pathogen, Klebsiella pneumoniae used to convert glycerol to 1,3-propanediol (1,3-PDO), was reused to prepare phage after fermentation. The phage infection showed that the fed-batch fermentation broth containing 71.6 g/L 1,3-PDO can be directly used for preparation of phage with a titer of 1 × 10<sup>8</sup> pfu/mL. Then, the two-step salting-out extraction was adopted to remove most impurities, e.g. acetic acid (93.5%), ethanol (91.5%) and cells (99.4%) at the first step, and obtain 1,3-PDO (56.6%) in the top phase as well as phage (97.4%) in the middle phase at the second step. This integrated process provides a cheap and environment-friendly manner for coproduction of 1,3-PDO and phage.</p>","PeriodicalId":9067,"journal":{"name":"Bioresources and Bioprocessing","volume":"11 1","pages":"44"},"PeriodicalIF":4.6,"publicationDate":"2024-05-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11082122/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140897048","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Anaerobic digestion of process water from hydrothermal treatment processes: a review of inhibitors and detoxification approaches. 热液处理工艺水的厌氧消化:抑制剂和解毒方法综述。
IF 4.6 3区 生物学
Bioresources and Bioprocessing Pub Date : 2024-05-07 DOI: 10.1186/s40643-024-00756-6
Mei Zhou, Kayode Taiwo, Han Wang, Jean-Nepomuscene Ntihuga, Largus T Angenent, Joseph G Usack
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