Asian-Australasian Journal of Animal Sciences最新文献

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Co-cultured methanogen improved the metabolism in the hydrogenosome of anaerobic fungus as revealed by gas chromatography-mass spectrometry analysis. 气相色谱-质谱分析结果表明,共培养的甲烷菌可改善厌氧真菌氢酶体的代谢。
IF 2.2 2区 农林科学
Asian-Australasian Journal of Animal Sciences Pub Date : 2020-12-01 Epub Date: 2020-01-13 DOI: 10.5713/ajas.19.0649
Yuqi Li, Meizhou Sun, Yuanfei Li, Yanfen Cheng, Weiyun Zhu
{"title":"Co-cultured methanogen improved the metabolism in the hydrogenosome of anaerobic fungus as revealed by gas chromatography-mass spectrometry analysis.","authors":"Yuqi Li,&nbsp;Meizhou Sun,&nbsp;Yuanfei Li,&nbsp;Yanfen Cheng,&nbsp;Weiyun Zhu","doi":"10.5713/ajas.19.0649","DOIUrl":"https://doi.org/10.5713/ajas.19.0649","url":null,"abstract":"<p><strong>Objective: </strong>The purpose of this study was to reveal the metabolic shift in the fungus cocultured with the methanogen (Methanobrevibacter thaueri).</p><p><strong>Methods: </strong>Gas chromatography-mass spectrometry was used to investigate the metabolites in anaerobic fungal (Pecoramyces sp. F1) cells and the supernatant.</p><p><strong>Results: </strong>A total of 104 and 102 metabolites were detected in the fungal cells and the supernatant, respectively. The partial least squares-discriminant analysis showed that the metabolite profiles in both the fungal cell and the supernatant were distinctly shifted when co-cultured with methanogen. Statistically, 16 and 30 metabolites were significantly (p<0.05) affected in the fungal cell and the supernatant, respectively by the co-cultured methanogen. Metabolic pathway analysis showed that co-culturing with methanogen reduced the production of lactate from pyruvate in the cytosol and increased metabolism in the hydrogenosomes of the anaerobic fungus. Citrate was accumulated in the cytosol of the fungus co-cultured with the methanogen.</p><p><strong>Conclusion: </strong>The co-culture of the anaerobic fungus and the methanogen is a good model for studying the microbial interaction between H2-producing and H2-utilizing microorganisms. However, metabolism in hydrogenosome needs to be further studied to gain better insight in the hydrogen transfer among microorganisms.</p>","PeriodicalId":8558,"journal":{"name":"Asian-Australasian Journal of Animal Sciences","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7649409/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37640400","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Extrusion enhances apparent metabolizable energy, ileal protein and amino acid digestibility of palm kernel cake in broilers. 挤压提高了肉仔鸡棕榈仁饼的表观代谢能、回肠蛋白质和氨基酸消化率。
IF 2.2 2区 农林科学
Asian-Australasian Journal of Animal Sciences Pub Date : 2020-12-01 Epub Date: 2020-03-12 DOI: 10.5713/ajas.19.0964
Hanim Shakirin Faridah, Yong Meng Goh, Mohamed Mustapha Noordin, Juan Boo Liang
{"title":"Extrusion enhances apparent metabolizable energy, ileal protein and amino acid digestibility of palm kernel cake in broilers.","authors":"Hanim Shakirin Faridah,&nbsp;Yong Meng Goh,&nbsp;Mohamed Mustapha Noordin,&nbsp;Juan Boo Liang","doi":"10.5713/ajas.19.0964","DOIUrl":"https://doi.org/10.5713/ajas.19.0964","url":null,"abstract":"<p><strong>Objective: </strong>This study consisted of two stages; the first was to determine the effect of extrusion and sieving treatments on the chemical properties of palm kernel cake (PKC), and accordingly, a follow-up experiment (second stage) was conducted to determine and compare the apparent metabolizable energy (AME), and protein and amino acid digestibility of extruded and sieved PKC.</p><p><strong>Methods: </strong>Two physical treatments, namely extrusion (using temperature profiles of 90°C/100°C/100°C, 90°C/100°C/110°C, and 90°C/100°C/120°C) and sieving (to 8 particles sizes ranging from >8.00 to 0.15 mm) were carried out to determine their effects on chemical properties, primarily crude protein (CP) and fiber contents of PKC. Based on the results from the above study, PKC that extruded with temperature profile 90/100/110°C and of sieved size between 1.5 to 0.15 mm (which made up of near 60% of total samples) were used to determine treatments effect on AME and CP and amino acid digestibility. The second stage experiment was conducted using 64 male Cobb 500 chickens randomly assigned to 16 cages (4 cages [or replicates] per treatment) to the following four dietary groups: i) basal (control) diet, ii) basal diet containing 20% untreated PKC, iii) basal diet containing 20% extruded PKC (EPKC), and iv) basal diet containing 20% sieved PKC (SPKC).</p><p><strong>Results: </strong>Extrusion and sieving had no effect on CP and ash contents of PKC, however, both treatments reduced (p<0.05) crude fiber by 21% and 19%, respectively. Overall, extrusion and sieving reduced content of most of the amino acids except for aspartate, glutamate, alanine and lysine which increased, while serine, cysteine and tryptophan remained unchanged. Extrusion resulted in 6% increase (p<0.05) in AME and enhanced CP digestibility (p<0.05) by 32%, as compared to the untreated PKC while sieving had no effect on AME but improved CP digestibility by 39% which was not significantly different from that by extrusion.</p><p><strong>Conclusion: </strong>Extrusion is more effective than sieving and serves as a practical method to enhance AME and digestibility of CP and several amino acids in broiler chickens.</p>","PeriodicalId":8558,"journal":{"name":"Asian-Australasian Journal of Animal Sciences","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7649399/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37731718","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 11
WITHDRAWN:Estrogen receptor β (ERβ) induces bovine ovarian granulosa cell (BGC) autophagy via the AKT/mTOR pathway. 雌激素受体β(ERβ)通过AKT/mTOR途径诱导牛卵巢颗粒细胞(BGC)自噬。
IF 2.2 2区 农林科学
Asian-Australasian Journal of Animal Sciences Pub Date : 2020-12-01 DOI: 10.5713/ab.20.0602
Yuxin Zheng, Ning Liu, Xiaorong Tang, Zhongliang Jiang
{"title":"WITHDRAWN:Estrogen receptor β (ERβ) induces bovine ovarian granulosa cell (BGC) autophagy via the AKT/mTOR pathway.","authors":"Yuxin Zheng, Ning Liu, Xiaorong Tang, Zhongliang Jiang","doi":"10.5713/ab.20.0602","DOIUrl":"10.5713/ab.20.0602","url":null,"abstract":"<p><p>Ahead of Print article withdrawn by Editorial Board.</p>","PeriodicalId":8558,"journal":{"name":"Asian-Australasian Journal of Animal Sciences","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38384671","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Investigation of muscle-specific beef color stability at different ultimate pHs. 不同最终 pH 值下牛肉肌肉特定颜色稳定性的研究。
IF 2.2 2区 农林科学
Asian-Australasian Journal of Animal Sciences Pub Date : 2020-12-01 Epub Date: 2020-02-25 DOI: 10.5713/ajas.19.0943
Shuang Wu, Jina Han, Rongrong Liang, Pengcheng Dong, Lixian Zhu, David L Hopkins, Yimin Zhang, Xin Luo
{"title":"Investigation of muscle-specific beef color stability at different ultimate pHs.","authors":"Shuang Wu, Jina Han, Rongrong Liang, Pengcheng Dong, Lixian Zhu, David L Hopkins, Yimin Zhang, Xin Luo","doi":"10.5713/ajas.19.0943","DOIUrl":"10.5713/ajas.19.0943","url":null,"abstract":"<p><strong>Objective: </strong>This study was aimed to investigate the muscle-specific beef color stability at normal and high ultimate pHs.</p><p><strong>Methods: </strong>The impact of muscle (Longissimus lumborum [LL] vs psoas major [PM]) and pH (normal ultimate pH [Np] vs high pH dark cutting beef [Hp]) on color stability, indicated by basic color traits, metmyoglobin reducing activity (MRA) and oxygen consumption (OC), as well as the lipid oxidation, were determined over 7 days of display at 4°C.</p><p><strong>Results: </strong>Hp-LL had the highest pH (6.92), followed by Hp-PM (6.01), Np-PM (5.76), and Np-LL (5.52). Hp-LL had increased (p<0.05) a*, chroma and % oxymyoglobin during display. Hp-LL also had the highest metmyoglobin (MMb) reducing activity and OC among all the samples, thus, the greatest color stability, although very dark throughout storage, with lowest values for lightness (L*) and yellowness (b*). Np-LL also exhibited relatively high color stability, as a result of its lower % MMb and OC and higher MRA than psoas muscle samples. The 0.2 unit difference of the pH between Hp and Np psoas muscle, resulted in the difference of the color intensity, not the color stability. Interestingly, high pH psoas muscle (Hp-PM) did not have better color stability than Np-PM, and in fact had lower color stability than even Np-LL. The similar level of OC and lipid oxidation cannot explain the difference in color stability between Hp-PM and Np-LL.</p><p><strong>Conclusion: </strong>The Hp does not always show better color stability compared with Np beef, which depends on the muscle type. The balance of MRA and OC is important to keep the color in great intensity and stability in the meantime.</p>","PeriodicalId":8558,"journal":{"name":"Asian-Australasian Journal of Animal Sciences","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7649401/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37683953","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The effect of intermittent feeding and cold water on performance and carcass traits of broilers reared under daily heat stress. 间歇饲养和冷水对日热应激肉鸡生产性能和胴体性状的影响。
IF 2.2 2区 农林科学
Asian-Australasian Journal of Animal Sciences Pub Date : 2020-12-01 Epub Date: 2020-03-12 DOI: 10.5713/ajas.19.0980
Kadir Erensoy, Moise Noubandiguim, Musa Sarıca, Resul Aslan
{"title":"The effect of intermittent feeding and cold water on performance and carcass traits of broilers reared under daily heat stress.","authors":"Kadir Erensoy,&nbsp;Moise Noubandiguim,&nbsp;Musa Sarıca,&nbsp;Resul Aslan","doi":"10.5713/ajas.19.0980","DOIUrl":"https://doi.org/10.5713/ajas.19.0980","url":null,"abstract":"<p><strong>Objective: </strong>This study aimed to determine the effect of intermittent feeding and cold water on performance and carcass traits in broiler chickens between 4 to 6 wk of age exposed to daily high temperature.</p><p><strong>Methods: </strong>Broilers were assigned to four treatment groups according to a 2×2 factorial design between 22 to 42 d of age (80 broilers per treatment, 4 replications). Broilers were divided into two main groups as feeding type (ad-libitum [AL] and intermittent [IF] for 6 h daily) and sub-groups as water temperature (normal [NW], 24.9°C and cold [CW], 16.4°C). Heat treatment was applied between 11.00 to 17.00 h daily between 22 to 42 d of age.</p><p><strong>Results: </strong>Live weight at 6th wk was not affected by feeding type and water temperature, but the live weight was significantly higher in IF chickens at the 5th wk (p<0.05). Average weekly gain of IF broiler chickens were higher compared to AL group at 4, 5, and 6 wk of age (p<0.05). Although feeding type did not affect feed intake in 4 and 5th wk, feed intake was higher in IF chickens at 6th wk (p<0.01). In addition, feeding type and water temperature did not affect feed conversion ratio and interactions were not significant (p>0.05). Water temperature had no significant effect on heart, liver, gizzard, and abdominal fat percentages (p>0.05).</p><p><strong>Conclusion: </strong>It is concluded that IF increased the average weekly gain in chickens reared under daily heat stress for 6 h between 22 to 42 d of age. IF in hot environmental conditions slightly increased performance without adversely affecting health, welfare, and physiological traits, whereas CW implementation had no significant effect on performance. It can also be said that IF suppresses a sudden increase in body temperature depending on age and live weight.</p>","PeriodicalId":8558,"journal":{"name":"Asian-Australasian Journal of Animal Sciences","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7649412/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37731717","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Seasonal changes in the reproductive performance in local cows receiving artificial insemination in the Pursat province of Cambodia. 柬埔寨普尔萨省接受人工授精的当地奶牛繁殖性能的季节性变化。
IF 2.2 2区 农林科学
Asian-Australasian Journal of Animal Sciences Pub Date : 2020-12-01 Epub Date: 2020-04-12 DOI: 10.5713/ajas.19.0893
Bengthay Tep, Yasuhiro Morita, Shuichi Matsuyama, Satoshi Ohkura, Naoko Inoue, Hiroko Tsukamura, Yoshihisa Uenoyama, Vutha Pheng
{"title":"Seasonal changes in the reproductive performance in local cows receiving artificial insemination in the Pursat province of Cambodia.","authors":"Bengthay Tep,&nbsp;Yasuhiro Morita,&nbsp;Shuichi Matsuyama,&nbsp;Satoshi Ohkura,&nbsp;Naoko Inoue,&nbsp;Hiroko Tsukamura,&nbsp;Yoshihisa Uenoyama,&nbsp;Vutha Pheng","doi":"10.5713/ajas.19.0893","DOIUrl":"https://doi.org/10.5713/ajas.19.0893","url":null,"abstract":"<p><strong>Objective: </strong>The present study aimed to survey seasonal changes in reproductive performance of local cows receiving artificial insemination (AI) in the Pursat province of Cambodia, a tropical country, to investigate if ambient conditions affect the reproductive performance of cows as to better understand the major problems regarding cattle production.</p><p><strong>Methods: </strong>The number of cows receiving AI, resultant number of calving, and calving rate were analyzed for those receiving the first AI from 2016 to 2017. The year was divided into three seasons: cool/dry (from November to February), hot/dry (from March to June), and wet (from July to October), based on the maximal temperature and rainfall in Pursat, to analyze the relationship between ambient conditions and the reproductive performance of cows. Body condition scores (BCS) and feeding schemes were also analyzed in these seasons.</p><p><strong>Results: </strong>The number of cows receiving AI was significantly higher in the cool/dry season than the wet season. The number of calving and calving rate were significantly higher in cows receiving AI in the cool/dry season compared with the hot/dry and wet seasons. The cows showed higher BCSs in the cool/dry season compared to the hot/dry and wet seasons probably due to the seasonal changes in the feeding schemes: these cows grazed on wild grasses in the cool/dry season but fed with a limited amount of grasses and straw in the hot/dry and wet seasons.</p><p><strong>Conclusion: </strong>The present study suggests that the low number of cows receiving AI, low number of calving, and low calving rate could be mainly due to poor body condition as a result of the poor feeding schemes during the hot/dry and wet seasons. The improvement of body condition by the refinement of feeding schemes may contribute to an increase in the reproductive performance in cows during the hot/dry and wet seasons in Cambodia.</p>","PeriodicalId":8558,"journal":{"name":"Asian-Australasian Journal of Animal Sciences","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7649400/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37841055","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Predicting nutrient excretion from dairy cows on smallholder farms in Indonesia using readily available farm data. 利用现成的农场数据预测印度尼西亚小农农场奶牛的营养排泄。
IF 2.2 2区 农林科学
Asian-Australasian Journal of Animal Sciences Pub Date : 2020-12-01 Epub Date: 2020-05-12 DOI: 10.5713/ajas.20.0089
Windi Al Zahra, Corina E van Middelaar, Imke J M de Boer, Simon J Oosting
{"title":"Predicting nutrient excretion from dairy cows on smallholder farms in Indonesia using readily available farm data.","authors":"Windi Al Zahra,&nbsp;Corina E van Middelaar,&nbsp;Imke J M de Boer,&nbsp;Simon J Oosting","doi":"10.5713/ajas.20.0089","DOIUrl":"https://doi.org/10.5713/ajas.20.0089","url":null,"abstract":"<p><strong>Objective: </strong>This study was conducted to provide models to accurately predict nitrogen (N) and phosphorus (P) excretion of dairy cows on smallholder farms in Indonesia based on readily available farm data.</p><p><strong>Methods: </strong>The generic model in this study is based on the principles of the Lucas equation, describing the relation between dry matter intake (DMI) and faecal N excretion to predict the quantity of faecal N (QFN). Excretion of urinary N and faecal P were calculated based on National Research Council recommendations for dairy cows. A farm survey was conducted to collect input parameters for the models. The data set was used to calibrate the model to predict QFN for the specific case. The model was validated by comparing the predicted quantity of faecal N with the actual quantity of faecal N (QFNACT) based on measurements, and the calibrated model was compared to the Lucas equation. The models were used to predict N and P excretion of all 144 dairy cows in the data set.</p><p><strong>Results: </strong>Our estimate of true N digestibility equalled the standard value of 92% in the original Lucas equation, whereas our estimate of metabolic faecal N was -0.60 g/100 g DMI, with the standard value being -0.61 g/100 g DMI. Results of the model validation showed that the R2 was 0.63, the MAE was 15 g/animal/d (17% from QFNACT), and the RMSE was 20 g/animal/d (22% from QFNACT). We predicted that the total N excretion of dairy cows in Indonesia was on average 197 g/animal/d, whereas P excretion was on average 56 g/animal/d.</p><p><strong>Conclusion: </strong>The proposed models can be used with reasonable accuracy to predict N and P excretion of dairy cattle on smallholder farms in Indonesia, which can contribute to improving manure management and reduce environmental issues related to nutrient losses.</p>","PeriodicalId":8558,"journal":{"name":"Asian-Australasian Journal of Animal Sciences","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7649398/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38250298","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Assessment of genomic prediction accuracy using different selection and evaluation approaches in a simulated Korean beef cattle population. 在模拟的韩国肉牛群体中使用不同的选择和评估方法评估基因组预测的准确性。
IF 2.2 2区 农林科学
Asian-Australasian Journal of Animal Sciences Pub Date : 2020-12-01 Epub Date: 2020-06-24 DOI: 10.5713/ajas.20.0217
Chiemela Peter Nwogwugwu, Yeongkuk Kim, Hyunji Choi, Jun Heon Lee, Seung-Hwan Lee
{"title":"Assessment of genomic prediction accuracy using different selection and evaluation approaches in a simulated Korean beef cattle population.","authors":"Chiemela Peter Nwogwugwu, Yeongkuk Kim, Hyunji Choi, Jun Heon Lee, Seung-Hwan Lee","doi":"10.5713/ajas.20.0217","DOIUrl":"10.5713/ajas.20.0217","url":null,"abstract":"<p><strong>Objective: </strong>This study assessed genomic prediction accuracies based on different selection methods, evaluation procedures, training population (TP) sizes, heritability (h2) levels, marker densities and pedigree error (PE) rates in a simulated Korean beef cattle population.</p><p><strong>Methods: </strong>A simulation was performed using two different selection methods, phenotypic and estimated breeding value (EBV), with an h2 of 0.1, 0.3, or 0.5 and marker densities of 10, 50, or 777K. A total of 275 males and 2,475 females were randomly selected from the last generation to simulate ten recent generations. The simulation of the PE dataset was modified using only the EBV method of selection with a marker density of 50K and a heritability of 0.3. The proportions of errors substituted were 10%, 20%, 30%, and 40%, respectively. Genetic evaluations were performed using genomic best linear unbiased prediction (GBLUP) and single-step GBLUP (ssGBLUP) with different weighted values. The accuracies of the predictions were determined.</p><p><strong>Results: </strong>Compared with phenotypic selection, the results revealed that the prediction accuracies obtained using GBLUP and ssGBLUP increased across heritability levels and TP sizes during EBV selection. However, an increase in the marker density did not yield higher accuracy in either method except when the h2 was 0.3 under the EBV selection method. Based on EBV selection with a heritability of 0.1 and a marker density of 10K, GBLUP and ssGBLUP_0.95 prediction accuracy was higher than that obtained by phenotypic selection. The prediction accuracies from ssGBLUP_0.95 outperformed those from the GBLUP method across all scenarios. When errors were introduced into the pedigree dataset, the prediction accuracies were only minimally influenced across all scenarios.</p><p><strong>Conclusion: </strong>Our study suggests that the use of ssGBLUP_0.95, EBV selection, and low marker density could help improve genetic gains in beef cattle.</p>","PeriodicalId":8558,"journal":{"name":"Asian-Australasian Journal of Animal Sciences","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7649411/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38292796","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluating genetic diversity and identifying priority conservation for seven Tibetan pig populations in China based on the mtDNA D-loop. 基于mtDNA D-loop的中国7个藏猪群体遗传多样性评价及优先保护选择
IF 2.2 2区 农林科学
Asian-Australasian Journal of Animal Sciences Pub Date : 2020-12-01 Epub Date: 2020-01-13 DOI: 10.5713/ajas.19.0752
Qianyun Ge, Caixia Gao, Yuan Cai, Ting Jiao, Jinqiang Quan, Yongbo Guo, Wangshan Zheng, Shengguo Zhao
{"title":"Evaluating genetic diversity and identifying priority conservation for seven Tibetan pig populations in China based on the mtDNA D-loop.","authors":"Qianyun Ge,&nbsp;Caixia Gao,&nbsp;Yuan Cai,&nbsp;Ting Jiao,&nbsp;Jinqiang Quan,&nbsp;Yongbo Guo,&nbsp;Wangshan Zheng,&nbsp;Shengguo Zhao","doi":"10.5713/ajas.19.0752","DOIUrl":"https://doi.org/10.5713/ajas.19.0752","url":null,"abstract":"<p><strong>Objective: </strong>Tibetan pigs, an excellent species unique to China, face serious threats, which in turn affects the development and utilization of the outstanding advantages of plateau hypoxia adaptability and reduces their genetic diversity. Therefore, a discussion of measures to conserve this genetic resource is necessary. The method, based on genetic diversity, genetic divergence and total genetic contribution rate of population, reflects the priority conservation order and varies depending on the three different purposes of conservation.</p><p><strong>Methods: </strong>We analyzed mitochondrial DNA control region (D-loop) variation in 1,201 individuals from nine Tibetan pig populations across five provinces and downloaded 564 mtDNA D-loop sequences from three indigenous pig breeds in Qinghai, Sichuan, and Yunnan Provinces distributed near the Tibetan pigs.</p><p><strong>Results: </strong>We analyzed three different aspects: Changdu Tibetan pigs have the highest genetic diversity, and from the perspective of genetic diversity, the priority conservation is Changdu Tibetan pigs. Hezuo Tibetan pigs have the highest genetic contribution, so the priority conservation is Hezuo Tibetan pigs in the genetic contribution aspect. Rkaze Tibetan pigs were severely affected by indigenous pig breeds, so if considering from the perspective of introgression, the priority conservation is Rkaze Tibetan pigs.</p><p><strong>Conclusion: </strong>This study evaluated genetic diversity and comprehensively assessed conservation priority from three different aspects in nine Tibetan pig populations.</p>","PeriodicalId":8558,"journal":{"name":"Asian-Australasian Journal of Animal Sciences","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7649404/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37640901","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Comparison of cecal microbiota composition in a three-way cross model in two hybrid pigs 两只杂交猪盲肠菌群组成的三向杂交模型比较
IF 2.2 2区 农林科学
Asian-Australasian Journal of Animal Sciences Pub Date : 2020-12-01 DOI: 10.5713/ajas.20.0681
Yuting Yang, Liyan Shen, Huan Gao, Jinming Ran, Xian Li, Hengxin Jiang, Xueyan Li, Zhenhui Cao, Ying Huang, Sumei Zhao, Chunlian Song, H. Pan
{"title":"Comparison of cecal microbiota composition in a three-way cross model in two hybrid pigs","authors":"Yuting Yang, Liyan Shen, Huan Gao, Jinming Ran, Xian Li, Hengxin Jiang, Xueyan Li, Zhenhui Cao, Ying Huang, Sumei Zhao, Chunlian Song, H. Pan","doi":"10.5713/ajas.20.0681","DOIUrl":"https://doi.org/10.5713/ajas.20.0681","url":null,"abstract":"30 Objectives: The intestinal microbiota plays an important role in host physiology, metabolism, 31 immunity, and behavior. And host genetics could influence the gut microbiota of hybrid 32 animals. The three-way cross model is commonly utilized in commercial pig production; 33 however, the effects of this model on the gut microbial composition are rarely reported. 34 Methods: Two three-way hybrid pigs were selected, with Saba pigs as the starting maternal 35 pig: Duroc × (Berkshire × Saba) (DBS) pig, Berkshire × (Duroc × Saba) (BDS) pig. One 36 hundred pigs of each model were reared from 35 days (d) to 210 d. The body weight or feed 37 consumption of all pigs were recorded and their feed/gain (F/G) ratio was calculated. On day 38 210, 10 pigs were selected for slaughter, and cecal chyme samples were collected for 16S 39 rRNA gene sequencing. 40 Results: The final body weight (FBW) and average daily gain (ADG) of DBS pigs were 41 significantly higher than those of BDS pigs (p<0.05), while the F/G ratios of DBS pigs were 42 significantly lower than those of BDS pigs (p<0.05). The dominant phyla in DBS and BDS 43 pigs were Bacteroidetes (55.23% vs 59%, respectively) and Firmicutes (36.65% vs 34.86%, 44 respectively) (p>0.05). At the genus level, the abundance of Prevotella, Roseburia, and 45 Anaerovibrio in DBS pigs was significantly lower than in BDS pigs (p<0.01). The abundance 46 of Eubacterium, Clostridium XI, Bacteroides, Methanomassiliicoccus, and Parabacteroides in 47 DBS pigs was significantly higher than in BDS pigs (p<0.05). The FBWs and ADGs were 48 positively correlated with Bacteroides, ClostridiumXI, and Parabacteroides but negatively 49 correlated with the Prevotella, Prevotella/Bacteroides (P/B) ratio, Roseburia, and 50 Anaerovibrio. 51 Ac ce pt ed A rti cle","PeriodicalId":8558,"journal":{"name":"Asian-Australasian Journal of Animal Sciences","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44239304","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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