Annual review of plant biology最新文献

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Nucleotide Sugar Transporters: Orchestrating Luminal Glycosylation in Plants. 核苷酸糖转运蛋白:协调植物腔内糖基化。
IF 21.3 1区 生物学
Annual review of plant biology Pub Date : 2025-05-01 Epub Date: 2025-03-04 DOI: 10.1146/annurev-arplant-083123-075017
Berit Ebert, Ariel Orellana
{"title":"Nucleotide Sugar Transporters: Orchestrating Luminal Glycosylation in Plants.","authors":"Berit Ebert, Ariel Orellana","doi":"10.1146/annurev-arplant-083123-075017","DOIUrl":"10.1146/annurev-arplant-083123-075017","url":null,"abstract":"<p><p>Eukaryotic glycobiology revolves around nucleotide sugar transporters (NSTs), which are critical for glycan biosynthesis in the Golgi apparatus and endoplasmic reticulum. In plants, NSTs share similarities with triose phosphate translocators (TPTs) and together form the NST/TPT superfamily. Major research efforts over the last decades have led to the biochemical characterization of several of these transporters and addressed their role in cell wall polysaccharide and glycoconjugate biosynthesis, revealing precise substrate specificity and function. While recent insights gained from NST and TPT crystal structures promise to unravel the molecular mechanisms governing these membrane proteins, their regulation and dynamic behavior remain enigmatic. Likewise, many uncharacterized and orphan NSTs pose exciting questions about the biology of the endomembrane system. We discuss the progress in this active research area and stimulate consideration for the intriguing outstanding questions with a view to establish a foundation for applications in plant engineering and biopolymer production.</p>","PeriodicalId":8335,"journal":{"name":"Annual review of plant biology","volume":" ","pages":"53-83"},"PeriodicalIF":21.3,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143555728","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Plant Peptide Ligands as Temporal and Spatial Regulators. 植物多肽配体的时空调节作用。
IF 21.3 1区 生物学
Annual review of plant biology Pub Date : 2025-05-01 Epub Date: 2025-03-10 DOI: 10.1146/annurev-arplant-070324-041348
Vilde O Lalun, Melinka A Butenko
{"title":"Plant Peptide Ligands as Temporal and Spatial Regulators.","authors":"Vilde O Lalun, Melinka A Butenko","doi":"10.1146/annurev-arplant-070324-041348","DOIUrl":"10.1146/annurev-arplant-070324-041348","url":null,"abstract":"<p><p>Throughout the life cycle of a plant, numerous responses need to be carefully regulated to ensure proper development and appropriate responses to external stimuli, and plant hormones play a crucial role in this regulation. Since the early 1990s, there has been expansive research elucidating the central role that peptide ligands play as intrinsic short- and long-distance communicators during development and as regulators of phenotypic plasticity. In this review, we focus on recently discovered mechanisms that ensure correct spatial and temporal cellular responses triggered by peptide ligands and provide examples of how peptide processing proteins and apoplastic conditions can regulate peptide activity in a timely manner.</p>","PeriodicalId":8335,"journal":{"name":"Annual review of plant biology","volume":" ","pages":"229-253"},"PeriodicalIF":21.3,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143596190","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A Way to Interact with the World: Complex and Diverse Spatiotemporal Cell Wall Thickenings in Plant Roots. 一种与世界互动的方式:植物根系中复杂多样的时空细胞壁增厚。
IF 21.3 1区 生物学
Annual review of plant biology Pub Date : 2025-05-01 Epub Date: 2025-01-02 DOI: 10.1146/annurev-arplant-102820-112451
Alex Cantó-Pastor, Concepcion Manzano, Siobhán M Brady
{"title":"A Way to Interact with the World: Complex and Diverse Spatiotemporal Cell Wall Thickenings in Plant Roots.","authors":"Alex Cantó-Pastor, Concepcion Manzano, Siobhán M Brady","doi":"10.1146/annurev-arplant-102820-112451","DOIUrl":"10.1146/annurev-arplant-102820-112451","url":null,"abstract":"<p><p>Plant cells are defined by their walls, which, in addition to providing structural support and shape, are an integral component of the nonliving extracellular space called the apoplast. Cell wall thickenings are present in many different root cell types. They come in a variety of simple and more complex structures with varying composition of lignin and suberin and can change in response to environmental stressors. The majority of these root cell wall thickenings and cell types that contain them are absent in the model plant <i>Arabidopsis thaliana</i> despite being present in most plant species. As a result, we know very little regarding their developmental control and function. Increasing evidence suggests that these structures are critical for responding to and facilitating adaptation to a wide array of stresses that a plant root experiences. These structures function in blocking apoplastic transport, oxygen, and water loss and enhancing root penetrative strength. In this review, we describe the most common types of cell wall thickenings in the outer cell types of plant roots-the velamen, exodermal thickenings, the sclerenchyma, and phi thickenings. Their cell type dependency, morphology, composition, environmental responsiveness, and genetic control in vascular plants are discussed, as well as their potential to generate more stress-resilient roots in the face of a changing climate.</p>","PeriodicalId":8335,"journal":{"name":"Annual review of plant biology","volume":" ","pages":"433-466"},"PeriodicalIF":21.3,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142920350","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rational Redomestication for Future Agriculture. 未来农业的理性归化。
IF 21.3 1区 生物学
Annual review of plant biology Pub Date : 2025-05-01 Epub Date: 2025-02-03 DOI: 10.1146/annurev-arplant-083123-064726
Nan Wang, Hongbo Li, Sanwen Huang
{"title":"Rational Redomestication for Future Agriculture.","authors":"Nan Wang, Hongbo Li, Sanwen Huang","doi":"10.1146/annurev-arplant-083123-064726","DOIUrl":"10.1146/annurev-arplant-083123-064726","url":null,"abstract":"<p><p>Modern agricultural practices rely on high-input, intensive cultivation of a few crop varieties with limited diversity, increasing the vulnerability of our agricultural systems to biotic and abiotic stresses and the effects of climate changes. This necessitates a paradigm shift toward a more sustainable agricultural model to ensure a stable and dependable food supply for the burgeoning global population. Leveraging knowledge from crop biology, genetics, and genomics, alongside state-of-the-art biotechnologies, rational redomestication has emerged as a targeted and knowledge-driven approach to crop innovation. This strategy aims to broaden the range of species available for agriculture, restore lost genetic diversity, and further improve existing domesticated crops. We summarize how diverse plants can be exploited in rational redomestication endeavors, including wild species, underutilized plants, and domesticated crops. Equipped with rational redomestication approaches, we propose different strategies to empower the fast and slow breeding systems distinguished by plant reproduction systems.</p>","PeriodicalId":8335,"journal":{"name":"Annual review of plant biology","volume":" ","pages":"637-662"},"PeriodicalIF":21.3,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143122047","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Functions and Mechanisms of Histone Modifications in Plants. 植物组蛋白修饰的功能和机制。
IF 21.3 1区 生物学
Annual review of plant biology Pub Date : 2025-05-01 Epub Date: 2025-02-14 DOI: 10.1146/annurev-arplant-083123-070919
Huy Le, Carl H Simmons, Xuehua Zhong
{"title":"Functions and Mechanisms of Histone Modifications in Plants.","authors":"Huy Le, Carl H Simmons, Xuehua Zhong","doi":"10.1146/annurev-arplant-083123-070919","DOIUrl":"10.1146/annurev-arplant-083123-070919","url":null,"abstract":"<p><p>Histones are far more than just the basic units of chromatin. Posttranslational modifications of histone tails have emerged as important regulatory mechanisms for diverse biological processes, including genome organization, gene expression, transposable element suppression, development, and environmental responses. This field is expanding rapidly with the development of new technologies and growing interest from both the basic and translational research communities. The past two decades have witnessed tremendous progress in our understanding of the complex, multilayered regulation and actions of histone modifications in plants. This review summarizes the characteristics, localization, and molecular functions of histone modifications with an emphasis on the well-studied marks in <i>Arabidopsis</i>. We further discuss their functions in developmental transitions and environmental responses as well as their contributions to epigenomic diversity and plasticity. By highlighting the functions and fundamental mechanisms of epigenetic modifications in model plants, this review underscores the potential to harness epigenetic regulation for agricultural improvement.</p>","PeriodicalId":8335,"journal":{"name":"Annual review of plant biology","volume":" ","pages":"551-578"},"PeriodicalIF":21.3,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143424577","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
B Vitamins: An Update on Their Importance for Plant Homeostasis. B 维生素:关于 B 族维生素对植物体内平衡重要性的最新研究。
IF 21.3 1区 生物学
Annual review of plant biology Pub Date : 2024-07-01 Epub Date: 2024-07-02 DOI: 10.1146/annurev-arplant-060223-025336
Teresa B Fitzpatrick
{"title":"B Vitamins: An Update on Their Importance for Plant Homeostasis.","authors":"Teresa B Fitzpatrick","doi":"10.1146/annurev-arplant-060223-025336","DOIUrl":"10.1146/annurev-arplant-060223-025336","url":null,"abstract":"<p><p>B vitamins are a source of coenzymes for a vast array of enzyme reactions, particularly those of metabolism. As metabolism is the basis of decisions that drive maintenance, growth, and development, B vitamin-derived coenzymes are key components that facilitate these processes. For over a century, we have known about these essential compounds and have elucidated their pathways of biosynthesis, repair, salvage, and degradation in numerous organisms. Only now are we beginning to understand their importance for regulatory processes, which are becoming an important topic in plants. Here, I highlight and discuss emerging evidence on how B vitamins are integrated into vital processes, from energy generation and nutrition to gene expression, and thereby contribute to the coordination of growth and developmental programs, particularly those that concern maintenance of a stable state, which is the foundational tenet of plant homeostasis.</p>","PeriodicalId":8335,"journal":{"name":"Annual review of plant biology","volume":" ","pages":"67-93"},"PeriodicalIF":21.3,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139995429","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Structure and Function of Auxin Transporters. 叶黄素转运体的结构和功能。
IF 21.3 1区 生物学
Annual review of plant biology Pub Date : 2024-07-01 Epub Date: 2024-07-02 DOI: 10.1146/annurev-arplant-070523-034109
Ulrich Z Hammes, Bjørn Panyella Pedersen
{"title":"Structure and Function of Auxin Transporters.","authors":"Ulrich Z Hammes, Bjørn Panyella Pedersen","doi":"10.1146/annurev-arplant-070523-034109","DOIUrl":"10.1146/annurev-arplant-070523-034109","url":null,"abstract":"<p><p>Auxins, a group of central hormones in plant growth and development, are transported by a diverse range of transporters with distinct biochemical and structural properties. This review summarizes the current knowledge on all known auxin transporters with respect to their biochemical and biophysical properties and the methods used to characterize them. In particular, we focus on the recent advances that were made concerning the PIN-FORMED family of auxin exporters. Insights derived from solving their structures have improved our understanding of the auxin export process, and we discuss the current state of the art on PIN-mediated auxin transport, including the use of biophysical methods to examine their properties. Understanding the mechanisms of auxin transport is crucial for understanding plant growth and development, as well as for the development of more effective strategies for crop production and plant biotechnology.</p>","PeriodicalId":8335,"journal":{"name":"Annual review of plant biology","volume":" ","pages":"185-209"},"PeriodicalIF":21.3,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139429047","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
New Insight Into Phytochromes: Connecting Structure to Function. 植物色素的新发现:连接结构与功能
IF 21.3 1区 生物学
Annual review of plant biology Pub Date : 2024-07-01 DOI: 10.1146/annurev-arplant-070623-110636
Jon Hughes, Andreas Winkler
{"title":"New Insight Into Phytochromes: Connecting Structure to Function.","authors":"Jon Hughes, Andreas Winkler","doi":"10.1146/annurev-arplant-070623-110636","DOIUrl":"https://doi.org/10.1146/annurev-arplant-070623-110636","url":null,"abstract":"<p><p>Red and far-red light-sensing phytochromes are widespread in nature, occurring in plants, algae, fungi, and prokaryotes. Despite at least a billion years of evolution, their photosensory modules remain structurally and functionally similar. Conversely, nature has found remarkably different ways of transmitting light signals from the photosensor to diverse physiological responses. We summarize key features of phytochrome structure and function and discuss how these are correlated, from how the bilin environment affects the chromophore to how light induces cellular signals. Recent advances in the structural characterization of bacterial and plant phytochromes have resulted in paradigm changes in phytochrome research that we discuss in the context of present-day knowledge. Finally, we highlight questions that remain to be answered and suggest some of the benefits of understanding phytochrome structure and function.</p>","PeriodicalId":8335,"journal":{"name":"Annual review of plant biology","volume":"75 1","pages":"153-183"},"PeriodicalIF":21.3,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141747338","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
FERONIA: A Receptor Kinase at the Core of a Global Signaling Network. FERONIA:全球信号网络核心的受体激酶。
IF 21.3 1区 生物学
Annual review of plant biology Pub Date : 2024-07-01 Epub Date: 2024-07-02 DOI: 10.1146/annurev-arplant-102820-103424
Alice Y Cheung
{"title":"FERONIA: A Receptor Kinase at the Core of a Global Signaling Network.","authors":"Alice Y Cheung","doi":"10.1146/annurev-arplant-102820-103424","DOIUrl":"10.1146/annurev-arplant-102820-103424","url":null,"abstract":"<p><p>Initially identified as a key regulator of female fertility in <i>Arabidopsis</i>, the FERONIA (FER) receptor kinase is now recognized as crucial for almost all aspects of plant growth and survival. FER partners with a glycosylphosphatidylinositol-anchored protein of the LLG family to act as coreceptors on the cell surface. The FER-LLG coreceptor interacts with different RAPID ALKALINIZATION FACTOR (RALF) peptide ligands to function in various growth and developmental processes and to respond to challenges from the environment. The RALF-FER-LLG signaling modules interact with molecules in the cell wall, cell membrane, cytoplasm, and nucleus and mediate an interwoven signaling network. Multiple FER-LLG modules, each anchored by FER or a FER-related receptor kinase, have been studied, illustrating the functional diversity and the mechanistic complexity of the FER family signaling modules. The challenges going forward are to distill from this complexity the unifying schemes where possible and attain precision and refinement in the knowledge of critical details upon which future investigations can be built. By focusing on the extensively characterized FER, this review provides foundational information to guide the next phase of research on FER in model as well as crop species and potential applications for improving plant growth and resilience.</p>","PeriodicalId":8335,"journal":{"name":"Annual review of plant biology","volume":" ","pages":"345-375"},"PeriodicalIF":21.3,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12034098/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139995332","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Structural Diversity in Eukaryotic Photosynthetic Light Harvesting. 真核生物光合采光的结构多样性。
IF 21.3 1区 生物学
Annual review of plant biology Pub Date : 2024-07-01 Epub Date: 2024-07-02 DOI: 10.1146/annurev-arplant-070623-015519
Masakazu Iwai, Dhruv Patel-Tupper, Krishna K Niyogi
{"title":"Structural Diversity in Eukaryotic Photosynthetic Light Harvesting.","authors":"Masakazu Iwai, Dhruv Patel-Tupper, Krishna K Niyogi","doi":"10.1146/annurev-arplant-070623-015519","DOIUrl":"10.1146/annurev-arplant-070623-015519","url":null,"abstract":"<p><p>Photosynthesis has been using energy from sunlight to assimilate atmospheric CO<sub>2</sub> for at least 3.5 billion years. Through evolution and natural selection, photosynthetic organisms have flourished in almost all aquatic and terrestrial environments. This is partly due to the diversity of light-harvesting complex (LHC) proteins, which facilitate photosystem assembly, efficient excitation energy transfer, and photoprotection. Structural advances have provided angstrom-level structures of many of these proteins and have expanded our understanding of the pigments, lipids, and residues that drive LHC function. In this review, we compare and contrast recently observed cryo-electron microscopy structures across photosynthetic eukaryotes to identify structural motifs that underlie various light-harvesting strategies. We discuss subtle monomer changes that result in macroscale reorganization of LHC oligomers. Additionally, we find recurring patterns across diverse LHCs that may serve as evolutionary stepping stones for functional diversification. Advancing our understanding of LHC protein-environment interactions will improve our capacity to engineer more productive crops.</p>","PeriodicalId":8335,"journal":{"name":"Annual review of plant biology","volume":" ","pages":"119-152"},"PeriodicalIF":21.3,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139740242","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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