Annals of botany最新文献

{"title":"Correction to: Centromere drive may propel the evolution of chromosome and genome size in plants.","authors":"","doi":"10.1093/aob/mcae200","DOIUrl":"https://doi.org/10.1093/aob/mcae200","url":null,"abstract":"","PeriodicalId":8023,"journal":{"name":"Annals of botany","volume":" ","pages":""},"PeriodicalIF":3.6,"publicationDate":"2024-11-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142643267","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Orchid phylogenetics and evolution: history, current status and prospects.","authors":"John V Freudenstein","doi":"10.1093/aob/mcae202","DOIUrl":"https://doi.org/10.1093/aob/mcae202","url":null,"abstract":"<p><strong>Background: </strong>Orchidaceae are one of the two largest families of angiosperms; they exhibit a host of changes -- morphological, ecological and molecular -- that make them excellent candidates for evolutionary study. Such studies are most effectively performed in a phylogenetic context, which provides direction to character change. Understanding of orchid relationships began in the pre-evolutionary classification systems of the 1800's that were based solely on morphology, and now is largely based on genomic analysis. The resulting patterns have been used to update family classification and to test many evolutionary hypotheses in the family.</p><p><strong>Scope: </strong>Recent analyses with dense sampling and large numbers of nuclear loci have yielded well-supported trees that have confirmed many longstanding hypotheses and overturned others. They are being used to understand evolutionary change and diversification in the family. These include dating the origination of the family, analysis of change in ecological habit (from terrestrial to epiphytic and back again in some cases), revealing significant plastid genome change in leafless holomycotrophs, studying biogeographic patterns in various parts of the world, and interpreting patterns of fungal associations with orchids.</p><p><strong>Conclusion: </strong>Understanding of orchid relationships has progressed significantly in recent decades, especially since DNA sequence data have been available. These data have contributed to an increasingly refined classification of orchids and the pattern has facilitated many studies on character evolution and diversification in the family. Whole genome studies of the family are just beginning and promise to reveal fine-level details underlying structure and function in these plants, and, when set in a phylogenetic context, provide a much richer understanding of how the family has been so successful in diversification.</p>","PeriodicalId":8023,"journal":{"name":"Annals of botany","volume":" ","pages":""},"PeriodicalIF":3.6,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142638043","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Rearranging development makes a slippery slope: a commentary on 'Carnivorous Nepenthes pitcher plants combine common developmental processes to make a complex epidermal trapping surface'.","authors":"C D Whitewoods","doi":"10.1093/aob/mcae182","DOIUrl":"https://doi.org/10.1093/aob/mcae182","url":null,"abstract":"","PeriodicalId":8023,"journal":{"name":"Annals of botany","volume":" ","pages":""},"PeriodicalIF":3.6,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142613530","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Root System Architecture Reorganization Under Decreasing Soil Phosphorus Lowers Root System Conductance of Zea mays.","authors":"Felix Maximilian Bauer, Dirk Norbert Baker, Mona Giraud, Juan Carlos Baca Cabrera, Jan Vanderborght, Guillaume Lobet, Andrea Schnepf","doi":"10.1093/aob/mcae198","DOIUrl":"https://doi.org/10.1093/aob/mcae198","url":null,"abstract":"<p><strong>Background and aims: </strong>The global supply of phosphorus is decreasing. At the same time, climate change reduces the availability of water in most regions of the world. Insights on how decreasing phosphorus availability influences plant architecture are crucial to understanding its influence on plant functional properties, such as the root system's water uptake capacity.</p><p><strong>Methods: </strong>In this study, we investigated the structural and functional responses of Zea mays to varying phosphorus fertilization levels focusing especially on the root system's conductance. A rhizotron experiment with soils ranging from severe phosphorus deficiency to sufficiency was conducted. We measured the architectural parameters of the whole plant and combined them with root hydraulic properties to simulate time-dependent root system conductance of growing plants under different phosphorus levels.</p><p><strong>Key results: </strong>We observed changes in the root system architecture, characterised by decreasing crown root elongation and reduced axial root radii with declining phosphorus availability. Modeling revealed that only plants with optimal phosphorus availability sustained a high root system conductance, while all other phosphorus levels led to a significantly lower root system conductance, both under light and severe phosphorus deficiency.</p><p><strong>Conclusion: </strong>We postulate that phosphorus deficiency decreases root system conductance, which could mitigate drought conditions through a more conservative water use strategy, but ultimately reduces biomass and impairs root development and overall water uptake capacity. Our results also highlight that the organisation of the root system, rather than its overall size, is critical for estimating important root functions.</p>","PeriodicalId":8023,"journal":{"name":"Annals of botany","volume":" ","pages":""},"PeriodicalIF":3.6,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142613445","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Masting ontogeny: the largest masting benefits accrue to the largest trees.","authors":"Jakub Szymkowiak, Andrew Hacket-Pain, Dave Kelly, Jessie Foest, Katarzyna Kondrat, Peter A Thomas, Jonathan Lageard, Georg Gratzer, Mario B Pesendorfer, Michał Bogdziewicz","doi":"10.1093/aob/mcae197","DOIUrl":"https://doi.org/10.1093/aob/mcae197","url":null,"abstract":"<p><strong>Background and aims: </strong>Both plants and animals display considerable variation in their phe- notypic traits as they grow. This variation helps organisms to adapt to specific challenges at different stages of development. Masting, the variable and synchronized seed production across years by a population of plants, is a common reproductive strategy in perennial plants that can enhance reproductive efficiency through increasing pollination efficiency and decreasing seed predation. Masting represents a population-level phenomenon generated from individual plant behaviors. While the developmental trajectory of individual plants influences their masting be- havior, the translation of such changes into benefits derived from masting remains unexplored.</p><p><strong>Methods and key results: </strong>We used 43 years of seed production monitoring in European beech (Fagus sylvatica) to address that gap. The largest improvements in reproductive efficiency from masting happen in the largest trees. Masting leads to a 48-fold reduction in seed predation in large, compared to 28-fold in small trees. Masting yields an 6-fold increase in pollination efficiency in large, compared to 2.5-fold in small trees. Paradoxically, although the largest trees show the biggest reproductive efficiency benefits from masting, large trees mast less strongly than small trees.</p><p><strong>Conclusions: </strong>That apparently suboptimal allocation of effort across years by large plants may be a consequence of anatomical constraints or bet-hedging. Ontogenetic shifts in individual mast- ing behavior and associated variable benefits have implications for the reproductive potential of plant populations as their age distribution changes, with applications in plant conservation and management.</p>","PeriodicalId":8023,"journal":{"name":"Annals of botany","volume":" ","pages":""},"PeriodicalIF":3.6,"publicationDate":"2024-11-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142613529","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Vegetative and reproductive morphology of Othniophyton elongatum (MacGinitie) gen. et comb. nov., an extinct angiosperm of possible caryophyllalean affinity from the Eocene of Colorado and Utah, USA.","authors":"Steven R Manchester, Walter S Judd, Julian E Correa-Narvaez","doi":"10.1093/aob/mcae196","DOIUrl":"https://doi.org/10.1093/aob/mcae196","url":null,"abstract":"<p><strong>Background and aims: </strong>Eocene foliage formerly attributed to the extant araliaceous genus Oreopanax was found attached to twigs bearing inflorescences and infructescences unlike those of Araliaceae. Using newly observable characters of phyllotaxy, vegetative and floral buds, infructescences and seeds, we sought to reassess the affinities of this strange angiosperm.</p><p><strong>Methods: </strong>Fossils were studied from the Parachute Creek Member of the Green River Formation from near Bonanza, Utah and Douglas Pass, Colorado (ca. 47 Ma). Macrofossil impression remains were investigated by low angle reflected light and subtle details of the vegetative and floral buds, stamens, mature fruits, and seeds were revealed by optical shadow effect microscopy documenting previously obscure topographic surface features.</p><p><strong>Key results: </strong>Othniophyton elongatum (MacGinitie) Manchester, Judd, Correa-Narvaez gen. et comb. nov. has simple, short-petiolate, elongate, entire-margined leaves with thick midveins, pinnate, brochidodromous secondaries, common intersecondary veins and finely reticulate higher order venation. Inflorescences are small axillary cymes; flower buds are subglobose and pedicellate, in bract axils. The flowers are actinomorphic, bisexual, with ca. five imbricate perianth parts, ca. 24 stamens with elongate anthers and short filaments, arising from a hypanthium. The whorl of stamens persists to fruiting stage. The ovary is superior, with probable basal placentation and five stigmatic arms. Fruits are pedicellate berries with a cup-shaped hypanthium and contain ca. 15 lensoidal reniform seeds, each with a curved embryo and ornamented with concentric ridges. The combined characters refute the prior placement in Araliaceae, and rule out affinities with most extant clades of angiosperms.</p><p><strong>Conclusions: </strong>The distinctive combination of observed features does not coincide with any extant family. Among extant orders of Eudicots, the fossil seems to conform most closely to the order Caryophyllales, but key differences remain. This example indicates that the vegetation of ca. 47 million years ago included some taxa that cannot readily be placed in modern families and genera.</p>","PeriodicalId":8023,"journal":{"name":"Annals of botany","volume":" ","pages":""},"PeriodicalIF":3.6,"publicationDate":"2024-11-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142613446","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Correction to: Bark production of generalist and specialist species across savannas and forests in the Cerrado.","authors":"","doi":"10.1093/aob/mcad043","DOIUrl":"10.1093/aob/mcad043","url":null,"abstract":"","PeriodicalId":8023,"journal":{"name":"Annals of botany","volume":" ","pages":"193"},"PeriodicalIF":3.6,"publicationDate":"2024-06-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11161558/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9360451","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Quantitative evaluation of the drivers of species richness in a Mediterranean ecosystem (Cape, South Africa).","authors":"Michael D Cramer, G Anthony Verboom","doi":"10.1093/aob/mcad134","DOIUrl":"10.1093/aob/mcad134","url":null,"abstract":"<p><strong>Background and aims: </strong>Mediterranean ecosystems have a high vascular plant species richness (SR) relative to their surface area. This SR, representing the balance between speciation and extinction, has been attributed to multiple mechanisms that result in both high rates of speciation and/or low rates of extinction. An abiding question is, however, what is special about Mediterranean ecosystems that enables this high SR? Apart from the long-term climatic stability of the region, SR has also been related to resource availability, the many individuals hypothesis, resource spatial heterogeneity, temporal heterogeneity and biotic feedbacks.</p><p><strong>Methods: </strong>Spatial patterns of species richness were related to climatic, edaphic and biotic variables and to spatial variability within the Greater Cape Floristic Region (GCFR) of South Africa. Boosted regression tree models were used to explore the strength of relationships between SR and environmental predictors related to each hypothesized mechanism.</p><p><strong>Key results: </strong>Water availability (i.e. precipitation) was a stronger predictor of SR than potential evapotranspiration or temperature. Scarcity of nutrients was also related to SR. There was no indication that SR was related to the density of individuals and only temporal heterogeneity induced by fire was related to SR. Spatial heterogeneities of climatic, edaphic and biotic variables were strongly associated with SR. Biotic interactions remain difficult to assess, although we have some evidence for a putative role in regulating SR.</p><p><strong>Conclusions: </strong>While the lack of ecosystem-resetting disturbances (e.g. glaciation) is undoubtedly a key requirement for high species accumulation, predictably, no one explanation holds the key to understanding SR. In the GCFR high SR is the product of a combination of adequate water, nutrient scarcity, spatial and temporal heterogeneity, and possibly biotic feedbacks.</p>","PeriodicalId":8023,"journal":{"name":"Annals of botany","volume":" ","pages":"801-818"},"PeriodicalIF":4.2,"publicationDate":"2024-05-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11082525/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10610006","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Earlier onset and slower heartwood investment in faster-growing trees of African tropical species.","authors":"Chadrack Kafuti, Romain Lehnebach, Nils Bourland, Hans Beeckman, Joris Van Acker, Nestor K Luambua, Jan Van den Bulcke","doi":"10.1093/aob/mcad079","DOIUrl":"10.1093/aob/mcad079","url":null,"abstract":"<p><strong>Background and aims: </strong>Heartwood plays an important role in maintaining the structural integrity of trees. Although its formation has long been thought to be driven solely by internal ageing processes, more recent hypotheses suggest that heartwood formation acts as a regulator of the tree water balance by modulating the quantity of sapwood. Testing both hypotheses would shed light on the potential ecophysiological nature of heartwood formation, a very common process in trees.</p><p><strong>Methods: </strong>We measured quantities of heartwood and sapwood, xylem conduits and the width and number of growth rings on 406 stems of Pericopsis elata with ages ranging from 2 to 237 years. A subset of 17 trees with similar ages but varying growth rate were sampled in a shaded (slower-growth) site and a sun-exposed (faster-growth) site. We used regression analysis and structural equation modelling to investigate the dynamics and drivers of heartwood formation.</p><p><strong>Key results: </strong>We found a positive effect of growth rate on the probability of heartwood occurrence, suggesting an earlier heartwood onset in faster-growing stems. After this onset age, heartwood area increased with stem diameter and age. Despite the similar heartwood production per unit stem diameter increment, shaded trees produced heartwood faster than sun-exposed trees. Tree age and hydraulics showed similar direct effects on heartwood and sapwood area of sun-exposed trees, suggesting their mutual role in driving the heartwood dynamics of sun-exposed trees. However, for shaded trees, only tree hydraulics showed a direct effect, suggesting its prominent role over age in driving the heartwood dynamics in limited growing conditions. The positive relationship between growth rate and maximum stomatal conductance supported this conclusion.</p><p><strong>Conclusions: </strong>Heartwood area increases as the tree ages, but at a slower rate in trees where water demand is balanced by a sufficient water supply. Our findings suggest that heartwood formation is not only a structural process but also functional.</p>","PeriodicalId":8023,"journal":{"name":"Annals of botany","volume":" ","pages":"905-916"},"PeriodicalIF":4.2,"publicationDate":"2024-05-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11082515/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10114904","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Sequential diversification with Miocene extinction and Pliocene speciation linked to mountain uplift explains the diversity of the African rain forest clade Monodoreae (Annonaceae).","authors":"Léo-Paul M J Dagallier, Fabien L Condamine, Thomas L P Couvreur","doi":"10.1093/aob/mcad130","DOIUrl":"10.1093/aob/mcad130","url":null,"abstract":"<p><strong>Background and aims: </strong>Throughout the Cenozoic, Africa underwent several climatic and geological changes impacting the evolution of tropical rain forests (TRFs). African TRFs are thought to have extended from east to west in a 'pan-African' TRF, followed by several events of fragmentation during drier climate periods. During the Miocene, climate cooling and mountain uplift led to the aridification of tropical Africa and open habitats expanded at the expense of TRFs, which probably experienced local extinctions. However, in plants, these drivers were previously inferred using limited taxonomic and molecular data. Here, we tested the impact of climate and geological changes on diversification within the diverse clade Monodoreae (Annonaceae) composed of 90 tree species restricted to African TRFs.</p><p><strong>Methods: </strong>We reconstructed a near-complete phylogenetic tree, based on 32 nuclear genes, and dated using relaxed clocks and fossil calibrations in a Bayesian framework. We inferred the biogeographical history and the diversification dynamics of the clade using multiple birth-death models.</p><p><strong>Key results: </strong>Monodoreae originated in East African TRFs ~25 million years ago (Ma) and expanded toward Central Africa during the Miocene. We inferred range contractions during the middle Miocene and document important connections between East and West African TRFs after 15-13 Ma. Our results indicated a sudden extinction event during the late Miocene, followed by an increase in speciation rates. Birth-death models suggested that African elevation change (orogeny) is positively linked to speciation in this clade.</p><p><strong>Conclusion: </strong>East Africa is inferred as an important source of Monodoreae species, and possibly for African plant diversity in general. Our results support a 'sequential scenario of diversification' in which increased aridification triggered extinction of TRF species in Monodoreae. This was quickly followed by fragmentation of rain forests, subsequently enhancing lagged speciation resulting from vicariance and improved climate conditions. In contrast to previous ideas, the uplift of East Africa is shown to have played a positive role in Monodoreae diversification.</p>","PeriodicalId":8023,"journal":{"name":"Annals of botany","volume":" ","pages":"677-696"},"PeriodicalIF":3.6,"publicationDate":"2024-05-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11082524/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10143017","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}