Contributions to microbiology最新文献

筛选
英文 中文
Bacterial sensing of antimicrobial peptides. 抗菌肽的细菌感应。
Contributions to microbiology Pub Date : 2009-01-01 Epub Date: 2009-06-02 DOI: 10.1159/000219377
Michael Otto
{"title":"Bacterial sensing of antimicrobial peptides.","authors":"Michael Otto","doi":"10.1159/000219377","DOIUrl":"https://doi.org/10.1159/000219377","url":null,"abstract":"<p><p>Antimicrobial peptides (AMPs) form a crucial part of human innate host defense, especially in neutrophil phagosomes and on epithelial surfaces. Bacteria have a variety of efficient resistance mechanisms to human AMPs, such as efflux pumps, secreted proteases, and alterations of the bacterial cell surface that are aimed to minimize attraction of the typically cationic AMPs. In addition, bacteria have specific sensors that activate AMP resistance mechanisms when AMPs are present. The prototypical Gram-negative PhoP/PhoQ and the Gram-positive Aps AMP-sensing systems were first described and investigated in Salmonella typhimurium and Staphylococcus epidermidis, respectively. Both include a classical bacterial two-component sensor/regulator system, but show many structural, mechanistic, and functional differences. The PhoP/PhoQ regulon controls a variety of genes not necessarily limited to AMP resistance mechanisms, but apparently aimed to combat innate host defense on a broad scale. In contrast, the staphylococcal Aps system predominantly upregulates AMP resistance mechanisms, namely the D-alanylation of teichoic acids, inclusion of lysyl-phosphati-dylglycerol in the cytoplasmic membrane, and expression of the putative VraFG AMP efflux pump. Notably, both systems are crucial for virulence and represent possible targets for antimicrobial therapy.</p>","PeriodicalId":79855,"journal":{"name":"Contributions to microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000219377","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28218864","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 99
Bacterial PEP-dependent carbohydrate: phosphotransferase systems couple sensing and global control mechanisms. 细菌pep依赖碳水化合物:磷酸转移酶系统偶联传感和全局控制机制。
Contributions to microbiology Pub Date : 2009-01-01 Epub Date: 2009-06-02 DOI: 10.1159/000219373
Joseph W Lengeler, Knut Jahreis
{"title":"Bacterial PEP-dependent carbohydrate: phosphotransferase systems couple sensing and global control mechanisms.","authors":"Joseph W Lengeler,&nbsp;Knut Jahreis","doi":"10.1159/000219373","DOIUrl":"https://doi.org/10.1159/000219373","url":null,"abstract":"<p><p>The PEP-dependent carbohydrate:phosphotransferase systems (PTSs) of enteric bacteria constitute a complex sensory system which involves as its central element a PEP-dependent His-protein kinase (Enzyme I). As a unit, the PTS comprises up to 20 different transporters per cell which correspond to its chemoreceptors for PTS carbohydrates, and several targeting subunits, which include in the low [G+C] Gram-positive bacteria an ancillary Ser/Thr-protein kinase. The PTS senses the presence of carbohydrates, in particular glucose, in the medium and the energy state of the cell, in the form of either the intracellular PEP-to-pyruvate ratio or the D-fructose-bisphosphate levels. This information is subsequently communicated to cellular targets, in particular those involved in the chemotactic response of the cell towards PTS carbohydrates, and in sensing glucose in the medium, using cAMP and several targeting subunits as intermediates. Peptide targeting subunits ensure the fast, transient, and yet accurate communication of the PTS with its more than hundred different targets, avoiding at the same time unwanted cross-talk. Many elements of this sensory system are simultaneously elements of specific and global regulatory networks. Thus, the PTS controls, besides the immediate (in the ms to s range) chemotactic responses, the activity of the various carbohydrate transporters and enzymes involved in carbon and energy metabolism through inducer exclusion, and in a delayed response (in the min to h range) the synthesis of these transporters and catabolic enzymes through catabolite repression. Indirect consequences of this program are phenomena related to cell surface rearrangements, which include flagella synthesis, as well as memory, adaptation, and learning effects. The analogy between the PTS and other prokaryotic systems, and more complex sensory systems from eukaryotic organisms which share elements with regulatory systems is obvious.</p>","PeriodicalId":79855,"journal":{"name":"Contributions to microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000219373","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28219621","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 93
Prevailing concepts of c-di-GMP signaling. c-di-GMP信号传导的流行概念。
Contributions to microbiology Pub Date : 2009-01-01 Epub Date: 2009-06-02 DOI: 10.1159/000219379
Ute Römling, Roger Simm
{"title":"Prevailing concepts of c-di-GMP signaling.","authors":"Ute Römling,&nbsp;Roger Simm","doi":"10.1159/000219379","DOIUrl":"https://doi.org/10.1159/000219379","url":null,"abstract":"<p><p>Recently, the list of ubiquitous bacterial secondary messengers which include cAMP and ppGpp has been extended by 3',5'-cyclic diguanylic acid (c-di-GMP). C-di-GMP metabolism is tuned by the tightly controlled activity of diguanylate cyclases and c-di-GMP-specific phosphodiesterases. As c-di-GMP-metabolizing enzymes are not only found frequently in bacterial genomes, but also are often numerous in individual genomes, the c-di-GMP metabolic network is highly complex whereby signaling specificity is adjusted on the level of expression, enzymatic activity, protein localization and, most likely, receptor affinity. The targets of c-di-GMP, which include protein and RNA receptors, are subsequently being unraveled. Besides the transition between sessility and motility, probably the most ancient regulatory control of bacterial behavior by c-di-GMP, many more phenotypes such as virulence are affected by c-di-GMP. However, the exact molecular mechanisms of c-di-GMP action remain to be discovered.</p>","PeriodicalId":79855,"journal":{"name":"Contributions to microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000219379","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28219626","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 68
Magnetosomes and magneto-aerotaxis. 磁小体和磁需氧性。
Contributions to microbiology Pub Date : 2009-01-01 Epub Date: 2009-06-02 DOI: 10.1159/000219380
Richard B Frankel, Dennis A Bazylinski
{"title":"Magnetosomes and magneto-aerotaxis.","authors":"Richard B Frankel,&nbsp;Dennis A Bazylinski","doi":"10.1159/000219380","DOIUrl":"https://doi.org/10.1159/000219380","url":null,"abstract":"<p><p>Magnetotactic bacteria orient and migrate along geomagnetic field lines. Magneto-aerotaxis increases the efficiency of respiring microaerophilic cells to efficiently find and maintain a position at a preferred microaerobic oxygen concentration. Magneto-aerotaxis could also facilitate access to regions of higher nutrient and electron acceptor concentration via periodic excursions above and below the preferred oxygen concentration level.</p>","PeriodicalId":79855,"journal":{"name":"Contributions to microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000219380","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28218863","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 28
Engineering bacterial signals and sensors. 工程细菌信号和传感器。
Contributions to microbiology Pub Date : 2009-01-01 Epub Date: 2009-06-02 DOI: 10.1159/000219381
Howard Salis, Alvin Tamsir, Christopher Voigt
{"title":"Engineering bacterial signals and sensors.","authors":"Howard Salis,&nbsp;Alvin Tamsir,&nbsp;Christopher Voigt","doi":"10.1159/000219381","DOIUrl":"https://doi.org/10.1159/000219381","url":null,"abstract":"<p><p>In the emerging field of synthetic biology, a central goal is to reliably engineer bacteria to respond to environmental signals according to a pre-determined genetic program. The sensor systems and genetic circuitry inside bacteria are the 'eyes' and 'brain' of a new class of biotechnological applications in which bacteria are used as living, self-replicating computers that can beneficially interact with the physical world. These engineered gene networks are constructed by extracting natural sensor systems and other genetic parts from multiple organisms and recombining them into novel configurations. This chapter is a how-to guide. It describes several strategies for engineering new bacterial sensor systems and synthetic gene networks that are capable of sensing a desired stimulus and generating interesting dynamical or pattern-forming responses. We also provide specification sheets describing many two-component and quorum-sensing systems, focusing on the information that one needs to know in order to use them for engineering applications.</p>","PeriodicalId":79855,"journal":{"name":"Contributions to microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000219381","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28218865","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 52
Correlations between carbon metabolism and virulence in bacteria. 细菌中碳代谢与毒力的关系。
Contributions to microbiology Pub Date : 2009-01-01 Epub Date: 2009-06-02 DOI: 10.1159/000219374
Sandrine Poncet, Eliane Milohanic, Alain Mazé, Jamila Nait Abdallah, Francine Aké, Mireille Larribe, Ala-Eddine Deghmane, Muhamed-Kheir Taha, Marie Dozot, Xavier De Bolle, Jean Jacques Letesson, Josef Deutscher
{"title":"Correlations between carbon metabolism and virulence in bacteria.","authors":"Sandrine Poncet,&nbsp;Eliane Milohanic,&nbsp;Alain Mazé,&nbsp;Jamila Nait Abdallah,&nbsp;Francine Aké,&nbsp;Mireille Larribe,&nbsp;Ala-Eddine Deghmane,&nbsp;Muhamed-Kheir Taha,&nbsp;Marie Dozot,&nbsp;Xavier De Bolle,&nbsp;Jean Jacques Letesson,&nbsp;Josef Deutscher","doi":"10.1159/000219374","DOIUrl":"https://doi.org/10.1159/000219374","url":null,"abstract":"<p><p>Bacteria have developed several mechanisms which allow the preferred utilization of the most efficiently metabolizable carbohydrates when these organisms are exposed to a mixture of carbon sources. Interestingly, the same or similar mechanisms are used by some pathogens to control various steps of their infection process. The efficient metabolism of a carbon source might serve as signal for proper fitness. Alternatively, the presence of a specific carbon source might indicate to bacterial cells that they thrive in infection-related organs, tissues or cells and that specific virulence genes should be turned on or switched off. Frequently, virulence gene regulators are affected by changes in carbon source availability. For example, expression of the gene encoding the Streptococcus pyogenes virulence regulator Mga is controlled by the classical carbon catabolite repression (CCR) mechanism operative in Firmicutes. The activity of PrfA, the major virulence regulator in Listeria monocytogenes, seems to be controlled by the phosphorylation state of phosphotransferase system(PTS) components. In Vibrio cholerae synthesis of HapR, which regulates the expression of genes required for motility, is controlled via the Crp/cAMP CCR mechanism, whereas synthesis of Salmonella enterica HilE, which represses genes in a pathogenicity island, is regulated by the carbohydrate-responsive, PTS-controlled Mlc.</p>","PeriodicalId":79855,"journal":{"name":"Contributions to microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000219374","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28219622","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 129
Contributions to microbiology. Bacterial sensing and signaling. Foreword. 对微生物学的贡献细菌感应和信号。前言。
Contributions to microbiology Pub Date : 2009-01-01 DOI: 10.1159/isbn.978-3-8055-9133-1
Mattias Collin, Raymond Schuch
{"title":"Contributions to microbiology. Bacterial sensing and signaling. Foreword.","authors":"Mattias Collin,&nbsp;Raymond Schuch","doi":"10.1159/isbn.978-3-8055-9133-1","DOIUrl":"https://doi.org/10.1159/isbn.978-3-8055-9133-1","url":null,"abstract":"","PeriodicalId":79855,"journal":{"name":"Contributions to microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28297974","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 14
Autoinducer-2-based chemical communication in bacteria: complexities of interspecies signaling. 细菌中基于自诱导剂2的化学通讯:种间信号的复杂性。
Contributions to microbiology Pub Date : 2009-01-01 Epub Date: 2009-06-02 DOI: 10.1159/000219371
Michael J Federle
{"title":"Autoinducer-2-based chemical communication in bacteria: complexities of interspecies signaling.","authors":"Michael J Federle","doi":"10.1159/000219371","DOIUrl":"https://doi.org/10.1159/000219371","url":null,"abstract":"<p><p>Cell-cell communication in bacteria, called quorum sensing, relies on production, release, and detection of signaling molecules, termed autoinducers. Communication enables populations of cells to synchronize gene expression and therefore behave as a group in a manner akin to cells in multicellular organisms. Most quorum-sensing systems allow communication within an individual species of bacteria. However, one autoinducer, called AI-2, is produced and recognized by many different bacterial species, indicating that some bacteria communicate across species boundaries. Current studies are aimed at discovering the role that AI-2 plays in gene regulation. Differential gene expression in response to AI-2 may cause bacterial behavioral changes, such as biofilm formation or transition to a pathogenic state. Interestingly, multiple mechanisms to detect AI-2 exist. These differences likely reflect variations in the role that AI-2 plays for different bacteria. Additionally, structural analyses of the AI-2 receptor in V. harveyi have provided insight into bacterial trans-membrane signal transduction. A further understanding of bacterial quorum-sensing processes may facilitate development of new technologies aimed at interfering with bacterial communication and virulence.</p>","PeriodicalId":79855,"journal":{"name":"Contributions to microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000219371","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28219619","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 116
Stand-alone response regulators controlling global virulence networks in streptococcus pyogenes. 控制化脓性链球菌全球毒力网络的独立反应调节器。
Contributions to microbiology Pub Date : 2009-01-01 Epub Date: 2009-06-02 DOI: 10.1159/000219375
Kevin S McIver
{"title":"Stand-alone response regulators controlling global virulence networks in streptococcus pyogenes.","authors":"Kevin S McIver","doi":"10.1159/000219375","DOIUrl":"https://doi.org/10.1159/000219375","url":null,"abstract":"<p><p>Global regulation of virulence gene expression via transcriptional regulators plays a central role in the ability of the bacterial pathogen Streptococcus pyogenes (the group A Streptococcus, GAS) to rapidly adapt during infection. The 'stand-alone' regulators Mga, RofA-like proteins (RALPs), and RopB/Rgg control important and diverse virulence regulons in response to growth-related signals and other environmental conditions in GAS. Stand-alone regulated genes encode factors important for colonization of tissues, immune evasion, persistence, dissemination, metabolism, and the response to stressors. Although conserved 'core' regulons have been established for each, recent studies have revealed significant inter-serotype and even intra-serotype variation in the regulatory patterns presented by the stand-alone regulators. This chapter will look at each stand-alone regulatory pathway in depth and discuss how these important global networks influence virulence as well as interact with each other to produce an integrated response during GAS infection.</p>","PeriodicalId":79855,"journal":{"name":"Contributions to microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000219375","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28219623","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 59
RNA thermosensors in bacterial pathogens. 细菌病原体中的RNA热传感器。
Contributions to microbiology Pub Date : 2009-01-01 Epub Date: 2009-06-02 DOI: 10.1159/000219378
Jörgen Johansson
{"title":"RNA thermosensors in bacterial pathogens.","authors":"Jörgen Johansson","doi":"10.1159/000219378","DOIUrl":"https://doi.org/10.1159/000219378","url":null,"abstract":"<p><p>During the course of an infection, a pathogenic bacterium has to sense the environment and adjust its gene expression appropriately. One such environmental cue is the difference in temperature inside and outside the host. RNA thermosensors are structures that can respond to differences in temperature by altering their conformation and thereby allowing/preventing binding of the ribosome to the translational start site. This chapter discusses different types of RNA thermosensors in general and RNA thermosensors known to control virulence gene expression in particular.</p>","PeriodicalId":79855,"journal":{"name":"Contributions to microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1159/000219378","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28219625","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 20
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
相关产品
×
本文献相关产品
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信