{"title":"Application of digital-movie-based flow colorimetry to hue-based end point detection of acid-base titration by feedback-based flow ratiometry using universal indicator.","authors":"Selass Kebede Olbemo, Yosuke Sakai, Masaki Takeuchi, Hideji Tanaka","doi":"10.1007/s44211-024-00712-6","DOIUrl":"https://doi.org/10.1007/s44211-024-00712-6","url":null,"abstract":"<p><p>A digital-movie-based flow colorimetry for pH measurement using a universal indicator has been applied to the end point detection of acid-base titrations. A two-channel flow system of feedback-based flow ratiometry, primarily consisting of two peristaltic pumps, a digital microscope-based detector, and a laptop computer, was constructed; a Visual Basic.NET program written in-house was used for automating the analytical processes. While maintaining the total flow rate (F<sub>T</sub>) constant, a titrand solution was merged with a titrant solution, both containing the same concentration of Van Urk's universal indicator, under varying flow ratios. Downstream, the video image was captured with a digital microscope and its color was expressed as RGB values, hue, and luminance. The end point was determined from the rapid change of hue reflecting the color transition of the universal indicator around the equivalence point. A stepwise titration of multivalent acid (i.e., H<sub>3</sub>PO<sub>4</sub>) was also possible by setting hue values corresponding to the first (1st) and second (2nd) equivalence points as criteria to determine the respective end points. The hue-based approach was validated by the titrations of CH<sub>3</sub>COOH and H<sub>3</sub>PO<sub>4</sub> (1st and 2nd equivalence points) with 0.1 mol dm<sup>-3</sup> NaOH and to those of NaOH and NH<sub>3</sub> with 0.1 mol dm<sup>-3</sup> HCl. The method was applied to determine Japanese Pharmacopoeia (JP) borax and JP citric acid. The respective assay results were 100.0 ± 0.0% and 100.0 ± 0.0%, both meeting the JP specifications. The developed method is simple, high throughput (1 titration/min), versatile, and does not require indicator replace depending on the equivalence point pH.</p>","PeriodicalId":7802,"journal":{"name":"Analytical Sciences","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2025-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142998784","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Compositional analysis of traditional liquid gold with separation of compounds containing heavy atoms in ion mobility-mass spectrometry.","authors":"Yoshihide Maeno, Takei Onoue, Yoshinori Iiguni, Hajime Ohtani, Shinya Kitagawa","doi":"10.1007/s44211-024-00708-2","DOIUrl":"https://doi.org/10.1007/s44211-024-00708-2","url":null,"abstract":"<p><p>\"Liquid gold\" has been traditionally used for over a century to decorate ceramicware, but its chemical composition has not been thoroughly investigated. One of the keys to successfully characterizing liquid gold, which is a complex mixture, is to distinguish Au-containing products from other chemicals. In this paper, we propose a separation based on the difference in collision cross section, of which chemicals with heavy atoms are relatively smaller than those without in ion mobility-mass spectrometry (IM-MS). Chemicals containing a single Au atom (and Pt atom) were successfully separated from other species in the two-dimensional distribution map for IM-MS. By a detailed analysis of the spectra obtained by IM-MS/MS with collision-induced dissociation before and after IM separation, we found that liquid gold (gold resinate) was a mixture of a series of (1) Au reacted with α-pinene-related units and (2) Au reacted with abietic acid units. α-Pinene and abietic acid are the main components of turpentine and rosin, the raw materials of liquid gold as reported previously (Anal. Sci. 2024, 40, 133-139). All Au-containing species contain sulfur atoms. Species of Au reacted with α-pinene-related units with different degrees of unsaturation and oxidation have also been identified. Liquid gold, a complex mixture of chemicals containing Au, has been successfully analyzed compositionally.</p>","PeriodicalId":7802,"journal":{"name":"Analytical Sciences","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2025-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142942800","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Qin Wang, Yanli Li, Lige Yao, Huiqin Li, Liuyan Zhang, Yingjie Wang, Jiayin Li, Tian Chen, Kun Chai, Junli Gao, Junshun Gao, Li Su, Xueming Li
{"title":"High-affinity ssDNA aptamer and chemiluminescent aptasensor for TIMP-1 detection in human serum","authors":"Qin Wang, Yanli Li, Lige Yao, Huiqin Li, Liuyan Zhang, Yingjie Wang, Jiayin Li, Tian Chen, Kun Chai, Junli Gao, Junshun Gao, Li Su, Xueming Li","doi":"10.1007/s44211-024-00673-w","DOIUrl":"10.1007/s44211-024-00673-w","url":null,"abstract":"<div><p>TIMP-1 (Tissue Inhibitor of Metalloproteinases-1) is a protein involved in regulating extracellular matrix (ECM) degradation. It is recognized as a significant biomarker for cancer diagnosis. This study aimed to develop and characterize a single-stranded DNA (ssDNA) aptamer targeting human TIMP-1 protein with high affinity and specificity. A magnetic beads-based SELEX process combined with qPCR was used to select aptamers over seven rounds. The enriched ssDNA library was analyzed using high-throughput sequencing to identify candidate sequences, and these sequences were characterized using surface plasmon resonance (SPR) and binding assays to evaluate their affinity and specificity. The selected ssDNA aptamer demonstrated a dissociation equilibrium constant (<i>K</i><sub>D</sub>) of 0.41 nM and a very slow off-rate, enabling effective capture of TIMP-1 in serum samples. Furthermore, a chemiluminescent aptasensor was developed for TIMP-1 detection, which exhibited high specificity and a broad linear detection range from 1 to 500 ng/mL in human serum. The developed ssDNA aptamer targeting TIMP-1 shows high affinity and specificity, and the chemiluminescent aptasensor demonstrates promising potential for clinical diagnosis of TIMP-1 levels in human serum.</p><h3>Graphical abstract</h3>\u0000<div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":7802,"journal":{"name":"Analytical Sciences","volume":"41 2","pages":"119 - 126"},"PeriodicalIF":1.8,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s44211-024-00673-w.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142913746","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Squaraine dye as a fluorescent probe for highly sensitive detection of pyrophosphate and alkaline phosphatase.","authors":"Wenxuan Zhu, Shuhua Zhao, Bei Yu, Yucun Tao, Chaoyang Wang, Lei Shi, Xiufeng Zhang, Jing Meng, Chengqiu Wu, Chunguang Ding, Lijia Yu","doi":"10.1007/s44211-024-00697-2","DOIUrl":"https://doi.org/10.1007/s44211-024-00697-2","url":null,"abstract":"<p><p>We synthesized a squaraine dye (F-0) to develop a method for detecting pyrophosphate (PPi) and alkaline phosphatase (ALP) by modulating the fluorescence of F-0. The fluorescence intensity of the F-0 system was quenched upon the addition of Cu<sup>2+</sup> ions; however, it was restored when PPi was introduced due to the formation of a complex between PPi and Cu<sup>2+</sup>. Since ALP can hydrolyze PPi, the fluorescence of the system was quenched again upon the addition of ALP. Based on these principles, we established a fluorescent probe that exhibits an \"off-on-off\" fluorescence response. The detection limits of this method for PPi and ALP were 103 nmol dm<sup>-3</sup> and 0.18 U dm<sup>-3</sup>, respectively. Moreover, this method demonstrates good selectivity and specificity and can be applied to the detection of PPi in actual samples.</p>","PeriodicalId":7802,"journal":{"name":"Analytical Sciences","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142891677","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"An optical BOD biosensor based on intracellular ATP measurements in genetically modified Saccharomyces cerevisiae.","authors":"Yuto Kanno, Yuta Tateno, Takuo Akimoto","doi":"10.1007/s44211-024-00706-4","DOIUrl":"https://doi.org/10.1007/s44211-024-00706-4","url":null,"abstract":"<p><p>A biosensor for biochemical oxygen demand (BOD) was developed based on intracellular 5'-adenosine triphosphate (ATP) measurements in Saccharomyces cerevisiae. Intracellular ATP was measured using an engineered protein named ATeam, comprising a bacterial F<sub>0</sub>F<sub>1</sub>-ATP synthase ε subunit sandwiched between cyan fluorescent protein and mVenus, a modified yellow fluorescent protein. Because the binding of ATP to ATeam induces changes in the fluorescence spectra owing to Fӧrster resonance energy transfer, S. cerevisiae expressing ATeam is expected to show spectral changes owing to the intracellular ATP produced by the metabolism of the BOD sample. A glycogen phosphorylase knockout S. cerevisiae strain expressing ATeam was prepared, and the fluorescence spectra of the strain were analyzed. Changes in the fluorescence spectra of glucose in the medium were observed, which exhibited a linear relationship with the glucose concentration (0-100 mg/L, R<sup>2</sup> = 0.970). Responses to lactose, fructose, sucrose, Glu, Asp, His, and Gly were evaluated and compared with typical BOD measurements. The results of this comparison suggest that a BOD biosensor based on intracellular ATP can be used for BOD measurements. A BOD standard solution comprising glucose and glutamic acid (GGA) was calibrated across a concentration range of 0 to 100 mg/L. Finally, simulated real samples were prepared using real pond water and GGA was measured. The correlation between the BOD value evaluated using intracellular ATP and that evaluated using the 5-day BOD test showed a linear relationship with R<sup>2</sup> = 0.944.</p>","PeriodicalId":7802,"journal":{"name":"Analytical Sciences","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142875604","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Mingpeng Yang, Jinghan Cheng, Xingqiang Zhao, Jun Cai, Wangping Zhou
{"title":"Sensitivity-enhanced potentiometric measurement by incorporating graphitic carbon nitride into the ion-to-electron transducer of potassium ion-selective electrodes.","authors":"Mingpeng Yang, Jinghan Cheng, Xingqiang Zhao, Jun Cai, Wangping Zhou","doi":"10.1007/s44211-024-00705-5","DOIUrl":"https://doi.org/10.1007/s44211-024-00705-5","url":null,"abstract":"<p><p>In recent years, wearable sweat sensors have garnered significant attention for real-time monitoring of human physiological information because of their ability to continuously and non-invasively detect multiple sweat biomarkers. Among these, potentiometric sensors stand out for their low power consumption, low cost, compact design, and real-time monitoring capabilities, making them an ideal alternative for sweat analysis. However, enhancing the sensitivity of ion-selective electrodes (ISEs), a critical parameter of potentiometric sensors, remains a challenging research focus. In this work, the sensitivity of K<sup>+</sup> ISEs was significantly enhanced by doping two-dimensional nanoparticles graphitic carbon nitride (g-C₃N₄) into the ion-to-electron transducer of the electrode via electrodeposition. The calibration curve slope of the K<sup>+</sup> potentiometric sensors with doped g-C<sub>3</sub>N<sub>4</sub> reached 59.6 mV/dec, representing a 33% increase in sensitivity compared to the control sensor without g-C₃N₄. Furthermore, the developed sensors demonstrated excellent repeatability, and anti-interference capabilities. Finally, the feasibility of the prepared sensors was further validated in artificial sweat. The large specific surface area of g-C₃N₄ combined with the excellent conductivity of PEDOT: PSS, significantly improved the sensitivity of ISEs in this study. This innovative approach paves a new avenue for the application of two-dimensional materials in potentiometric sensors, potentially advancing the field of real-time sweat analysis.</p>","PeriodicalId":7802,"journal":{"name":"Analytical Sciences","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142863106","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Efficient single-channel current measurements of the human BK channel using a liposome-immobilized gold probe.","authors":"Minako Hirano, Mami Asakura, Toru Ide","doi":"10.1007/s44211-024-00707-3","DOIUrl":"https://doi.org/10.1007/s44211-024-00707-3","url":null,"abstract":"<p><p>The human BK channel (hBK) is an essential membrane protein that regulates various biological functions, and its dysfunction leads to serious diseases. Understanding the biophysical properties of hBK channels is crucial for drug development. Artificial lipid bilayer recording is used to measure biophysical properties at the single-channel level. However, this technique is time-consuming and complicated; thus, its measurement efficiency is very low. Previously, we developed a novel technique to improve the measurement efficiency by rapidly forming lipid bilayer membranes and incorporating ion channels into the membrane using a hydrophilically modified gold probe. To further improve our technique for application to the hBK channel, we combined it using the gold probe with a liposome fusion method. Using a probe on which liposomes containing hBK channels were immobilized, the channels were efficiently incorporated into the lipid bilayer membrane, and the measured channel currents showed the current characteristics of the hBK channel. This technique will be useful for the efficient measurements of the channel properties of hBK and other biologically important channels.</p>","PeriodicalId":7802,"journal":{"name":"Analytical Sciences","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142871145","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Metabolic labeling of RNA using ribonucleoside analogs enables the evaluation of RNA synthesis and degradation rates.","authors":"Hidenori Tani","doi":"10.1007/s44211-024-00704-6","DOIUrl":"https://doi.org/10.1007/s44211-024-00704-6","url":null,"abstract":"<p><p>Long noncoding RNAs (lncRNAs) are transcripts exceeding 200 nucleotides that do not encode proteins. Despite lacking protein-coding capabilities, lncRNAs play crucial roles in cellular processes, including gene-expression modulation and structural maintenance. The study of lncRNAs has evolved significantly since 2009, with advancements in analytical methodologies providing new insights into their functions and dynamics. Key developments include BRIC-Seq, SLAM-Seq, TUC-Seq, TimeLapse-seq, and Dyrec-Seq. These methodologies have enabled researchers to investigate lncRNA behavior under various conditions, including cellular stress responses and complex biologic systems. Future challenges include developing comprehensive techniques for identifying lncRNA-interacting proteins and advancing in vivo methodologies using model organisms. As the field progresses, integrating these technologies will enhance our understanding of lncRNA biology, potentially leading to novel therapeutic strategies and deeper insights into gene-regulation mechanisms.</p>","PeriodicalId":7802,"journal":{"name":"Analytical Sciences","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142852213","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Bromine isotope splitting in vibrational spectra of bromoform by time-resolved transient transmission spectroscopy.","authors":"W Gadomski, K Polok, K Skała, B Ratajska-Gadomska","doi":"10.1007/s44211-024-00702-8","DOIUrl":"https://doi.org/10.1007/s44211-024-00702-8","url":null,"abstract":"<p><p>The femtosecond pump-probe technique, i.e. the transient transmission spectroscopy, has been used for the first time, to detect the vibrational spectra of symmetric fundamentals ν<sub>2</sub> and ν<sub>3</sub> in bromoform and chloroform. The spectra were obtained by fast Fourier transforms of the time domain signals. For both, CHCl<sub>3</sub> and CHBr<sub>3</sub>, there are four isotopologues contributing to the spectra, due to the existence of two stable isotopes; chlorine, <sup>35</sup>Cl and <sup>37</sup>Cl, and bromine, <sup>79</sup>Br and <sup>81</sup>Br, respectively. While for chloroform the isotope splitting of the ν<sub>3</sub> spectral band can be observed even in the spontaneous Raman scattering, for bromoform it is not detectable. Herewith we show that using the time domain spectroscopy and the windowed Fourier transform method we can provide the high resolution spectrum of the ν<sub>3</sub> fundamental in bromoform, in which the contributions of all isotopologues are well distinguishable. The data have been collected for few volume concentrations of the studied liquids diluted in the neutral solvent CCl<sub>4</sub>. It is shown that the intensity pattern of the spectra evolves with decreasing concentration and for the ν<sub>3</sub> fundamental it reaches the natural abundance pattern at a very high dilution. The simple theoretical model, which treats the molecules in a liquid as interacting oscillators, allows us to explain the dependence of the shape of the spectrum on the strength of the intermolecular interactions.</p>","PeriodicalId":7802,"journal":{"name":"Analytical Sciences","volume":" ","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142827123","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}