Frontiers in bioscience (Elite edition)最新文献

{"title":"Newly Isolated <i>Priestia megaterium</i> LAMA1607 for Enhanced Biological Phosphorus Removal: A Genomic and Functional Characterization.","authors":"Maria Eduarda Castro do Nascimento, Letícia Coelho Montagna, Laíza Manfroi, Yan de Oliveira Laaf, Luigi Ferrazza Maiochi, Marcus Adonai Castro da Silva, André Oliveira de Souza Lima","doi":"10.31083/j.fbe1604037","DOIUrl":"https://doi.org/10.31083/j.fbe1604037","url":null,"abstract":"&lt;p&gt;&lt;strong&gt;Background: &lt;/strong&gt;Enhanced biological phosphorus removal (EBPR) systems utilize phosphorus-accumulating organisms (PAOs) to remove phosphorus from wastewater since excessive phosphorus in water bodies can lead to eutrophication. This study aimed to characterize a newly isolated PAO strain for its potential application in EBPR systems and to screen for additional biotechnological potential. Here, sequencing allowed for genomic analysis, identifying the genes and molecules involved, and exploring other potentials. Additionally, assessing the phosphorus removal performance of the PAO strain in common effluents is essential for its potential application in large-scale systems.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Methods: &lt;/strong&gt;A strain designated LAMA1607 was isolated from activated sludge and selected based on its ability to remove total phosphate from the culture medium. Genomic DNA was extracted and sequenced using the Illumina NovaSeq 6000 platform. Assembly and annotation were performed using CLC Genomics Workbench v.24.0 (QIAGEN®) and Rapid Annotation using Subsystem Technology (RAST)/Pathosystems Resource Integration Center (PATRIC) server tools. Functional prediction of uncharacterized proteins was completed using PHYRE2, and secondary metabolite identification was performed using antiSMASH. Further, additional enzymes with biotechnological applications were manually curated through the Association of Manufacturers and Formulators of Enzyme Products (AMFEP) list. The phosphorus removal capability was assessed in domestic and fishery effluents under enriched and unenriched conditions, where pH, microbial growth, and total phosphorus were monitored over 48 hours.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Results: &lt;/strong&gt;The genome sequence comprised 5,234,874 bp divided into 20 contigs, 5540 coding sequences, and a GC content of 38.0%; subsequently, LAMA1607 was identified through Basic Local Alignment Search Tool (BLAST) analysis as &lt;i&gt;Priestia megaterium&lt;/i&gt;. Genome annotation revealed 27 genes potentially involved in phosphorus removal, including eight encoding transport proteins, three regulatory proteins, twelve enzymes, and others related to phosphorus incorporation and polyphosphate (polyP) granule formation. Moreover, other enzymes of interest were identified, such as hydrolases, lipases, proteases, and amylases, alongside secondary metabolite gene clusters, such as Non-ribosomal peptide synthetase-independent siderophore. &lt;i&gt;P. megaterium&lt;/i&gt; LAMA1607 effectively removed up to 70% of the total phosphorus from the fishery effluent.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Conclusions: &lt;/strong&gt;Genomic analysis suggests that &lt;i&gt;P. megaterium&lt;/i&gt; LAMA1607 possesses the mechanistic functions for phosphorus uptake, transport, and storage while also identifying additional biotechnologically relevant enzymes and capabilities. Meanwhile, tests on the effluent demonstrated significant phosphorus removal. These findings support the biotechnological potential and application of &lt;i&gt;P. megaterium&lt;/i&gt; LAMA","PeriodicalId":73068,"journal":{"name":"Frontiers in bioscience (Elite edition)","volume":"16 4","pages":"37"},"PeriodicalIF":0.0,"publicationDate":"2024-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142903903","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Bacterial Communities and Their Role in Bacterial Infections.","authors":"Olga I Guliy, Stella S Evstigneeva","doi":"10.31083/j.fbe1604036","DOIUrl":"10.31083/j.fbe1604036","url":null,"abstract":"<p><p>Since infections associated with microbial communities threaten human health, research is increasingly focusing on the development of biofilms and strategies to combat them. Bacterial communities may include bacteria of one or several species. Therefore, examining all the microbes and identifying individual community bacteria responsible for the infectious process is important. Rapid and accurate detection of bacterial pathogens is paramount in healthcare, food safety, and environmental monitoring. Here, we analyze biofilm composition and describe the main groups of pathogens whose presence in a microbial community leads to infection (<i>Staphylococcus aureus</i>, <i>Enterococcus spp</i>., <i>Cutibacterium spp</i>., bacteria of the HACEK, etc.). Particular attention is paid to bacterial communities that can lead to the development of device-associated infections, damage, and disruption of the normal functioning of medical devices, such as cardiovascular implants, biliary stents, neurological, orthopedic, urological and penile implants, etc. Special consideration is given to tissue-located bacterial biofilms in the oral cavity, lungs and lower respiratory tract, upper respiratory tract, middle ear, cardiovascular system, skeletal system, wound surface, and urogenital system. We also describe methods used to analyze the bacterial composition in biofilms, such as microbiologically testing, staining, microcolony formation, cellular and extracellular biofilm components, and other methods. Finally, we present ways to reduce the incidence of biofilm-caused infections.</p>","PeriodicalId":73068,"journal":{"name":"Frontiers in bioscience (Elite edition)","volume":"16 4","pages":"36"},"PeriodicalIF":0.0,"publicationDate":"2024-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142903404","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Extracting Quercetin from Different Plant Sources, Purifying It Using Different Extraction Methods (Chemical, Physical, and Enzymatic), and Measuring Its Antioxidant Activity.","authors":"Safa Hussein Baqer, Zena Kadhim Al-Younis, Sarmad Ghazi Al-Shawi","doi":"10.31083/j.fbe1604035","DOIUrl":"https://doi.org/10.31083/j.fbe1604035","url":null,"abstract":"<p><strong>Background: </strong>Flavonoids are among the most important compounds found in plants, since laboratory studies have shown them to be a daily requirement in human diets due to their various health benefits. Therefore, this study focused on extracting, purifying, and measuring the antioxidant activity of the flavonoid quercetin, which is widely found in plants and possesses a variety of biological activities, from different plant sources.</p><p><strong>Methods: </strong>The extraction of quercetin was performed using several methods (chemical, physical, and enzymatic) and several extraction solutions (water, ethanol, and chloroform) from several plants (spinach, dill, Onion Skin, <i>Pistacia eurycarpa</i>, sumac, digalkhasab chemri, and leelwi chemri). The alcoholic extract extracted by chemical method was purified and the content of total flavonoids based on quercetin in all plant extracts was determined using adsorption chromatography on a silica gel column (100-200 mesh), followed by thin layer chromatography (TLC). TLC and high performance liquid chromatography (HPLC) were used to assess the purity of quercetin. The ability of quercetin to capture free radicals using 2,2-diphenyl-1-picrylhydrazyl (DPPH) was compared to that of butylated hydroxytoluene (BHT). Statistical analyses were performed using completely randomized designs (CRD) for factorial experiments, and the least significant difference (LSD) test was used to calculate the significant differences between the averages of the coefficients at the 0.05 probability level.</p><p><strong>Results: </strong>The alcoholic <i>Pistacia</i> extract extracted by chemical method yielded the highest concentration of quercetin (84.037 mg/g). Furthermore, it was found that quercetin purified from <i>Pistacia</i> possessed strong antioxidant activity, and its antioxidant activity increased with increased concentration.</p><p><strong>Conclusions: </strong><i>Pistacia eurycarpa</i> showed the highest quercetin content among the assessed plants. Moreover, solvents played a major role in extracting plant components due to the high polarity of flavonoids. Quercetin purified using a silica gel column demonstrated antioxidant activity.</p>","PeriodicalId":73068,"journal":{"name":"Frontiers in bioscience (Elite edition)","volume":"16 4","pages":"35"},"PeriodicalIF":0.0,"publicationDate":"2024-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142903889","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Amalgamation of Metal Tolerant PGPR <i>Buttiauxella</i> sp. EA20 with Birch Wood Biochar Enhanced Growth and Biofortification of Rapeseed under Copper Action.","authors":"Galina Borisova, Maria Maleva, Tripti, Olga Voropaeva, Nadezhda Chukina, Anastasia Tugbaeva, Adarsh Kumar","doi":"10.31083/j.fbe1604034","DOIUrl":"https://doi.org/10.31083/j.fbe1604034","url":null,"abstract":"<p><strong>Background: </strong>Amalgamation of metal-tolerant plant growth promoting rhizobacteria (PGPR) with biochar is a promising direction for the development of chemical-free biofertilizers that can mitigate environmental risks, enhance crop productivity and their biological value. The main objective of the work includes the evaluation of the influence of prepared bacterial biofertilizer (BF) on biometric growth parameters as well as physiological and biochemical characteristics of rapeseed (<i>Brassica napus</i> L.) at copper action.</p><p><strong>Methods: </strong>The prepared BF was based on novel metal tolerant strain of PGPR <i>Buttiauxella</i> sp. EA20 isolated from the rhizosphere of orchid <i>Epipactis atrorubens</i> and birch wood biochar (BC). The pot-scale experiments included six treatments: peat-containing control substrate (CS); CS + 200Cu (200 mg Cu/kg of soil); CS + 5% BC (<i>v/v</i>); CS + 5% BC + 200Cu; CS + 5% BF (<i>v/v</i>); CS + 5% BF + 200Cu.</p><p><strong>Results: </strong>Single Cu treatment caused the decrease in rapeseed leaf area, shoot and root length, fresh and dry biomass, as well as an increase in water saturation deficit, possibly due to damage of cell membranes by lipid peroxidation. Addition of BF or BC alone mitigated these harmful effects of copper. Application of BF, regardless of Cu addition, increased the rapeseed leaf area (1.6 times on average), plant fresh and dry biomass (2.5 times on average), and photosynthetic pigment content (1.8 times on average). In addition, BF treatment along with Cu enhanced the antioxidant activity of <i>B. napus</i> due to the accumulation of non-enzymatic antioxidants such as carotenoids, free proline and soluble phenolic compounds, including flavonoids. Moreover, plant enrichment with copper and essential macronutrients such as nitrogen, phosphorus and potassium was observed.</p><p><strong>Conclusions: </strong>The study concludes that application of complex biofertilizer based on metal tolerant PGPR strain <i>Buttiauxella</i> sp. EA20 and birch wood biochar mitigated the harmful effects of copper, enhanced the rapeseed growth and increased its biological value. Future perspective includes evaluation of the potential for using the resulting biofertilizer to improve the growth and biofortification of other crop species.</p>","PeriodicalId":73068,"journal":{"name":"Frontiers in bioscience (Elite edition)","volume":"16 4","pages":"34"},"PeriodicalIF":0.0,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142904297","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Biosurfactant Production using <i>Candida tropicalis</i> URM 1150 and its Application in the Bioremediation of Coast Environments Impacted by Oil Spills.","authors":"Maria Catarina de F Caldas, Renata R Silva, Hugo M Meira, Goretti Sonia Silva, Leonie A Sarubbo, Juliana M Luna","doi":"10.31083/j.fbe1604033","DOIUrl":"https://doi.org/10.31083/j.fbe1604033","url":null,"abstract":"<p><strong>Background: </strong>This study aimed to produce, characterize, and apply a biosurfactant as a bioremediation tool for oil-contaminated coastal environments.</p><p><strong>Methods: </strong>The biosurfactant was produced in a medium containing 5.0% corn steep liquor and 1.5% residual frying oil by <i>Candida tropicalis</i> (URM 1150) for 144 hours with 200 rpm agitation. The growth curve and production of the biosurfactant were evaluated. The emulsifying properties and stability of the biosurfactant were tested against pH, temperature, and NaCl variations. Toxicity assays were carried out on seeds, the microcrustacean <i>Artemia salina,</i> and the bivalve <i>Anomalocardia brasiliana</i>. Static and kinetic assays were performed, alongside stone washing to assess the removal capacity.</p><p><strong>Results: </strong>The produced biosurfactant had a surface tension reduction capacity of 70 to 25 mN/m, yielding 7.1 g/L, and a critical micellar concentration (CMC) of 0.4%. During the initial 4-hour cultivation period, the growth curve showed an exponential phase, marked by a constant increase in production. In the final growth stage, biosurfactant production reached its maximum value of 7.1 g/L. After 120 h of cultivation, the maximum biomass output of 9.93 g/L was reached. The biosurfactant was applied in static and kinetic tests with seawater and sand contaminated with oil. The biosurfactant remained stable in the face of the tested variations. The biosurfactant is anionic in nature and showed no toxicity to the microcrustacean <i>Artemia salina</i>, vegetable seeds, or the bivalve <i>Anomalocardia brasiliana</i>, which exhibited 100% survival rates. The biomolecule removed 97% of the contaminated oil on the stone. The biosurfactant proved efficient and biocompatible for the bioremediation of oil derivatives, showing significant removal rates of hydrophobic compounds.</p><p><strong>Conclusion: </strong>These results indicate that the biosurfactant has great potential for application as a remediation agent to clean up oil spills in coastal environments.</p>","PeriodicalId":73068,"journal":{"name":"Frontiers in bioscience (Elite edition)","volume":"16 4","pages":"33"},"PeriodicalIF":0.0,"publicationDate":"2024-11-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142903884","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Development of a Thermoresponsive Core-Shell Hydrogel for Sequential Delivery of Antibiotics and Growth Factors in Regenerative Endodontics.","authors":"Sayna Shamszadeh, Saeed Asgary, Mohammad Akrami, Fatemeh Mashhadiabbas, Alireza Akbarzadeh Baghban, Forough Shams","doi":"10.31083/j.fbe1604032","DOIUrl":"https://doi.org/10.31083/j.fbe1604032","url":null,"abstract":"<p><strong>Background: </strong>Regenerative endodontics requires an innovative delivery system to release antibiotics/growth factors in a sequential trend. This study focuses on developing/characterizing a thermoresponsive core-shell hydrogel designed for targeted drug delivery in endodontics.</p><p><strong>Methods: </strong>The core-shell chitosan-alginate microparticles were prepared by electrospraying to deliver bone morphogenic protein-2 for 14 days and transforming growth factor-beta 1 (TGF-β1) for 7-14 days. Methylcellulose (MC) and gelatin were utilized to create the core-shell hydrogel to load a modified triple antibiotic combination (penicillin G/metronidazole/ciprofloxacin (PMC)) and growth factor-loaded microparticles in the shell and the core compartments, respectively. Morphological assessment, core-shell structural analysis, FTIR analysis, rheological analysis, swelling, and degradation rate studies were conducted for characterization. The viability of dental pulp stem cells (DPSCs) upon antibiotic exposure, antibacterial activity, and release studies of PMC and growth factors were investigated. Cellular studies (cell viability, alkaline phosphatase (ALP) activity, osteo/odontoblast gene expression (using Reverse transcription-polymerase chain reaction (RT-PCR)) and <i>in vivo</i> studies (inflammatory response and differentiation potential of the developed hydrogel by subcutaneous implantation in rats via histological examination) were assessed.</p><p><strong>Results: </strong>The hydrogel showed a porous microstructure with interconnected pores. Core-shell structure analysis confirmed the successful extrusion of the MC hydrogel to the surface. FTIR analysis revealed interactions between MC and gelatin. Rheological analysis indicated time-dependent gel formation, supporting thermosensitivity at 37 °C. Swelling occurred rapidly, and degradation reached 62.42% on day 45. Further, antibiotics exhibited no cytotoxicity on DPSCs. Sequential release of antibiotics and growth factors was observed for up to 5 and 14 d, respectively. The hydrogel showed antibacterial activity. DPSCs exhibited increased proliferation, ALP activity, and odontoblast gene expression. <i>In vivo</i> studies showed that the biocompatible drug-loaded hydrogel exhibited more mineralization than the control.</p><p><strong>Conclusions: </strong>The developed core-shell hydrogel containing PMC and growth factor-loaded core-shell microparticles provided a versatile and biocompatible platform for sequential drug delivery in regenerative endodontics. The system demonstrates promising characteristics for dentin regeneration, making it a potential candidate for clinical applications.</p>","PeriodicalId":73068,"journal":{"name":"Frontiers in bioscience (Elite edition)","volume":"16 4","pages":"32"},"PeriodicalIF":0.0,"publicationDate":"2024-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142903888","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Isolation of a Novel Bacterium Isolate Capable of Utilizing Crude Oil and Diesel Oil Spills as a Biological Bioremediation Agent.","authors":"Ghydaa H Aljeboury, AbdulSalam Tawfeeq Dawood, Rawaa A Khalaf, Rebah N Algafari, Rehab S Ramadhan, Sura S Talib","doi":"10.31083/j.fbe1604031","DOIUrl":"https://doi.org/10.31083/j.fbe1604031","url":null,"abstract":"<p><strong>Background: </strong>Contamination with crude oil and hydrocarbons has become a global threat. Such threats have urged us to invent solutions to deal with this dilemma. However, chemical treatment comes with limited benefits. The use of bioremediation proved to be the optimal approach to face this problem since it is cost-effective, time-conserving and may improve the quality of soil and increase its fertility.</p><p><strong>Methods: </strong>Soil samples were collected from three sites with the highest degree of pollution in Iraq: Al-Latifia, Al-Begei, and Basra. These were the source of novel <i>Streptomyces</i> isolates that could degrade contaminants and be used as a source of nutrients. The isolation principle was the degradation of petroleum in these soils as a carbon source.</p><p><strong>Results: </strong>The most efficient isolate was obtained from Basra soil, characterized by the highest degree of contamination. The bacterium grows on minimal medium with crude oil, diesel fuel, aromatic, and non-aromatic hydrocarbons as the only source of carbon and showed the ability to reduce a hydrocarbon mixture containing 23 analytes with C8-C40 and C13-C30 representing total crude hydrocarbons effectively and with a high mineralization capability reaching 84%. This isolate was found to produce biosurfactants and reduce surface tension significantly.</p><p><strong>Conclusions: </strong>Using chemical treatment of crude oil contaminants, burying the contaminated areas, or sometimes flooding them with water to eliminate these contaminants may not be an effective solution. Thus, using nonpathogenic microorganisms, especially those indigenous to the soil, maybe the most effective solution to achieve this goal.</p>","PeriodicalId":73068,"journal":{"name":"Frontiers in bioscience (Elite edition)","volume":"16 4","pages":"31"},"PeriodicalIF":0.0,"publicationDate":"2024-10-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142903890","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Quercetin, the Potential Powerful Flavonoid for Human and Food: A Review.","authors":"Safa Hussein Baqer, Sarmad Ghazi Al-Shawi, Zena Kadhim Al-Younis","doi":"10.31083/j.fbe1603030","DOIUrl":"https://doi.org/10.31083/j.fbe1603030","url":null,"abstract":"<p><p>Flavonoids occur naturally in different types of fruits and vegetables, including tea, cabbage, cauliflower, elderberries, cranberries, red apples, lettuce, pears, spinach, green hot peppers, white and red onions, kale, blueberries, and nuts. Among these flavonoids is quercetin, a potent natural antioxidant and cytotoxic substance with a number of therapeutic functions. Nowadays, quercetin is a common ingredient in many nutraceutical and cosmeceutical products due to its antioxidant properties. Its antibacterial effects and possible action mechanisms have been explored in many studies. From these, it has been established that quercetin stops the activity of numerous Gram-negative and -positive bacteria, fungi, and viruses. This review clarifies the plant sources and extraction methods of quercetin, as well as its medicinal applications as an antibacterial, antifungal, antiviral, and antioxidant agent, with a particular emphasis on the underlying mechanisms of its biological activity. The mechanism of its antimicrobial effect involves damaging the cell membrane-e.g., by changing its permeability, preventing biofilm formation, reducing the mitochondrial expression of virulence factors, and inhibiting protein and nucleic-acid synthesis. Moreover, quercetin has been shown to impede the activity of a variety of drug-resistant bacterial strains, pointing to the possibility of using it as a strong antimicrobial substance against such strains. In addition, it has occasionally been demonstrated that specific structural alterations to quercetin can increase its antibacterial action in comparison to the parent molecule. Overall, this review synthesizes our understanding of the mode of action of quercetin and its prospects for use as a therapeutic material.</p>","PeriodicalId":73068,"journal":{"name":"Frontiers in bioscience (Elite edition)","volume":"16 3","pages":"30"},"PeriodicalIF":0.0,"publicationDate":"2024-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142333674","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"<i>Streptomyces</i> as a Novel Biotool for Azo Pigments Remediation in Contaminated Scenarios.","authors":"Fernando Bautista-Pinzón, Juan Fonseca-Ordoñez, Mayerlen Falla-Obando, Jairo Gonzales-Tuta, Luis Diaz-Barrera","doi":"10.31083/j.fbe1603029","DOIUrl":"10.31083/j.fbe1603029","url":null,"abstract":"<p><strong>Background: </strong>Azo pigments are widely used in the textile and leather industry, and they generate diverse contaminants (mainly in wastewater effluents) that affect biological systems, the rhizosphere community, and the natural activities of certain species.</p><p><strong>Methods: </strong>This review was performed according to the Systematic Reviews and Meta Analyses (PRISMA) methodology.</p><p><strong>Results: </strong>In the last decade, the use of <i>Streptomyces</i> species as biological azo-degraders has increased, and these bacteria are mainly isolated from mangroves, dye-contaminated soil, and marine sediments. Azo pigments such as acid orange, indigo carmine, Congo red, and Evans blue are the most studied compounds for degradation, and <i>Streptomyces</i> produces extracellular enzymes such as peroxidase, laccase, and azo reductase. These enzymes cleave the molecule through asymmetric cleavage, followed by oxidative cleavage, desulfonation, deamination, and demethylation. Typically, some lignin-derived and phenolic compounds are used as mediators to improve enzyme activity. The degradation process generates diverse compounds, the majority of which are toxic to human cells and, in some cases, can improve the germination process in some horticulture plants.</p><p><strong>Conclusions: </strong>Future research should include analytical methods to detect all of the molecules that are generated in degradation processes to determine the involved reactions. Moreover, future studies should delve into consortium studies to improve degradation efficiency and observe the relationship between microorganisms to generate scale-up biotechnological applications in the wastewater treatment industry.</p>","PeriodicalId":73068,"journal":{"name":"Frontiers in bioscience (Elite edition)","volume":"16 3","pages":"29"},"PeriodicalIF":0.0,"publicationDate":"2024-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142333669","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Biotechnological Advances Utilizing Aptamers and Peptides Refining PD-L1 Targeting.","authors":"Hari Prasad Timilsina, Satya Prakash Arya, Xiaohong Tan","doi":"10.31083/j.fbe1603028","DOIUrl":"https://doi.org/10.31083/j.fbe1603028","url":null,"abstract":"<p><p>While monoclonal antibodies have shown success in cancer immunotherapy, their limitations prompt exploration of alternative approaches such as aptamers and peptides targeting programmed death ligand 1 (PD-L1). Despite the significance of these biotechnological tools, a comprehensive review encompassing both aptamers and peptides for PD-L1 targeting is lacking. Addressing this gap is crucial for consolidating recent advancements and insights in this field. Biotechnological advances leveraging aptamers and peptides represent a cutting-edge approach in refining the targeting proteins. Our review aims to provide valuable guidance for researchers and clinicians, highlighting the biotechnological advances utilizing aptamers and peptides refining PD-L1 targeting.</p>","PeriodicalId":73068,"journal":{"name":"Frontiers in bioscience (Elite edition)","volume":"16 3","pages":"28"},"PeriodicalIF":0.0,"publicationDate":"2024-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142333670","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}