Advances in applied microbiology最新文献_第2页

Subcellular biochemistry and biology of filamentous entomopathogenic fungi. 丝状昆虫病原真菌的亚细胞生物化学和生物学。

2区生物学

Advances in applied microbiology Pub Date : 2024-01-01 Epub Date: 2024-04-22 DOI: 10.1016/bs.aambs.2024.04.002

Sheng-Hua Ying

引用次数: 0

Morphological responses of filamentous fungi to stressful environmental conditions. 丝状真菌对胁迫环境条件的形态反应。

2区生物学

Advances in applied microbiology Pub Date : 2024-01-01 Epub Date: 2024-07-26 DOI: 10.1016/bs.aambs.2024.07.001

Marina Fomina, Olena Gromozova, Geoffrey Michael Gadd

{"title":"Morphological responses of filamentous fungi to stressful environmental conditions.","authors":"Marina Fomina, Olena Gromozova, Geoffrey Michael Gadd","doi":"10.1016/bs.aambs.2024.07.001","DOIUrl":"https://doi.org/10.1016/bs.aambs.2024.07.001","url":null,"abstract":"The filamentous growth mode of fungi, with its modular design, facilitates fungal adaptation to stresses they encounter in diverse terrestrial and anthropogenic environments. Surface growth conditions elicit diverse morphological responses in filamentous fungi, particularly demonstrating the remarkable adaptability of mycelial systems to metal- and mineral-rich environments. These responses are coupled with fungal biogeochemical activity and can ameliorate hostile conditions. A tessellated agar tile system, mimicking natural environmental heterogeneity, revealed negative chemotropism to toxic metals, distinct extreme growth strategies, such as phalanx and guerrilla movements and transitions between them, and the formation of aggregated re-allocation structures (strands, cords, synnemata). Other systems showed intrahyphal growth, intense biomineralization, and extracellular hair-like structures. Studies on submerged mycelial growth, using the thermophilic fungus Thielavia terrestris as an example, provided mechanistic insights into the morphogenesis of two extreme forms of fungal submerged culture-pelleted and dispersed growth. It was found that the development of fungal pellets was related to fungal adaptation to unfavorable stressful conditions. The two key elements affecting morphogenesis leading to the formation of either pelleted or dispersed growth were found to be (1) a lag phase (or conidia swelling stage) as a specific period of fungal morphogenesis when a certain growth form is programmed in response to morphogenic stressors, and (2) cAMP as a secondary messenger of cell signaling, defining the implementation of the particular growth strategy. These findings can contribute to knowledge of fungal-based biotechnologies, providing a means for controllable industrial processes at both morphological and physiological levels.","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":"129 ","pages":"115-169"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142399099","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Basidiomycetes to the rescue: Mycoremediation of metal-organics co-contaminated soils. 基枝真菌的拯救：金属-有机物共污染土壤的菌体修复。

2区生物学

Advances in applied microbiology Pub Date : 2024-01-01 Epub Date: 2024-07-08 DOI: 10.1016/bs.aambs.2024.06.001

Lea Traxler, Katrin Krause, Erika Kothe

{"title":"Basidiomycetes to the rescue: Mycoremediation of metal-organics co-contaminated soils.","authors":"Lea Traxler, Katrin Krause, Erika Kothe","doi":"10.1016/bs.aambs.2024.06.001","DOIUrl":"10.1016/bs.aambs.2024.06.001","url":null,"abstract":"The increasing need for metals leads to contaminated post-mining landscapes. At the same time, the contamination with organic, recalcitrant contamination increases. This poses a problem of reuse of large areas, often co-contaminated with both, metals, and organic pollutants. For the remediation of areas contaminated with multiple contaminants and combining many stress factors, technical solutions including groundwater treatment, where necessary, have been devised. However, this is applied to highly contaminated, small sites. The reuse of larger, co-contaminated landscapes remains a major challenge. Mycoremediation with fungi offers a good option for such areas. Fungi cope particularly well with heterogeneous conditions due to their adaptability and their large hyphal network. This chapter summarizes the advantages of basidiomycetes with a focus on wood rot fungi in terms of their ability to tolerate metals, radionuclides, and organic contaminants such as polycyclic aromatic hydrocarbons. It also shows how these fungi can reduce toxicity of contaminants to other organisms including plants to allow for restored land-use. The processes based on diverse molecular mechanisms are introduced and their use for mycoremediation is discussed.","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":"129 ","pages":"83-113"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142399096","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Development and applications of genome-scale metabolic network models. 基因组尺度代谢网络模型的开发与应用。

2区生物学

Advances in applied microbiology Pub Date : 2024-01-01 Epub Date: 2024-03-01 DOI: 10.1016/bs.aambs.2024.02.002

Jinyi Qian, Chao Ye

引用次数: 0

The infant gut microbiota as the cornerstone for future gastrointestinal health. 婴儿肠道微生物群是未来胃肠道健康的基石。

2区生物学

Advances in applied microbiology Pub Date : 2024-01-01 Epub Date: 2024-02-19 DOI: 10.1016/bs.aambs.2024.02.001

Chiara Tarracchini, Christian Milani, Gabriele Andrea Lugli, Leonardo Mancabelli, Francesca Turroni, Douwe van Sinderen, Marco Ventura

{"title":"The infant gut microbiota as the cornerstone for future gastrointestinal health.","authors":"Chiara Tarracchini, Christian Milani, Gabriele Andrea Lugli, Leonardo Mancabelli, Francesca Turroni, Douwe van Sinderen, Marco Ventura","doi":"10.1016/bs.aambs.2024.02.001","DOIUrl":"10.1016/bs.aambs.2024.02.001","url":null,"abstract":"The early postnatal period represents a critical window of time for the establishment and maturation of the human gut microbiota. The gut microbiota undergoes dramatic developmental changes during the first year of life, being influenced by a variety of external factors, with diet being a major player. Indeed, the introduction of complementary feeding provides novel nutritive substrates and triggers a shift from milk-adapted gut microbiota toward an adult-like bacterial composition, which is characterized by an enhancement in diversity and proportions of fiber-degrading bacterial genera like Ruminococcus, Prevotella, Eubacterium, and Bacteroides genera. Inadequate gut microbiota development in early life is frequently associated with concomitant and future adverse health conditions. Thus, understanding the processes that govern initial colonization and establishment of microbes in the gastrointestinal tract is of great importance. This review summarizes the actual understanding of the assembly and development of the microbial community associated with the infant gut, emphasizing the importance of mother-to-infant vertical transmission events as a fundamental arrival route for the first colonizers.","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":"126 ","pages":"93-119"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140855226","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Remediation of toxic metal and metalloid pollution with plant symbiotic fungi. 利用植物共生真菌修复有毒金属和类金属污染。

2区生物学

Advances in applied microbiology Pub Date : 2024-01-01 Epub Date: 2024-04-23 DOI: 10.1016/bs.aambs.2024.04.001

Qing Zhen, Xinru Wang, Xianxian Cheng, Weiguo Fang

{"title":"Remediation of toxic metal and metalloid pollution with plant symbiotic fungi.","authors":"Qing Zhen, Xinru Wang, Xianxian Cheng, Weiguo Fang","doi":"10.1016/bs.aambs.2024.04.001","DOIUrl":"https://doi.org/10.1016/bs.aambs.2024.04.001","url":null,"abstract":"Anthropogenic activities have dramatically accelerated the release of toxic metal(loid)s into soil and water, which can be subsequently accumulated in plants and animals, threatening biodiversity, human health, and food security. Compared to physical and chemical remediation, bioremediation of metal(loid)-polluted soil using plants and/or plant symbiotic fungi is usually low-cost and environmentally friendly. Mycorrhizal fungi and endophytic fungi are two major plant fungal symbionts. Mycorrhizal fungi can immobilize metal(loid)s via constitutive mechanisms, including intracellular sequestration with vacuoles and vesicles and extracellular immobilization by cell wall components and extracellular polymeric substances such as glomalin. Mycorrhizal fungi can improve the efficacy of phytoremediation by promoting plant symplast and apoplast pathways. Endophytic fungi also use constitutive cellular components to immobilize metal(loid)s and to reduce the accumulation of metal(loid)s in plants by modifying plant physiological status. However, a specific mechanism for the removal of methylmercury pollution was recently discovered in the endophytic fungi Metarhizium, which could be acquired from bacteria via horizontal gene transfer. In contrast to mycorrhizal fungi that are obligate biotrophs, some endophytic fungi, such as Metarhizium and Trichoderma, can be massively and cost-effectively produced, so they seem to be well-placed for remediation of metal(loid)-polluted soil on a large scale.","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":"129 ","pages":"171-187"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142399071","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Stress response and adaptation mechanisms in Kluyveromyces marxianus. Kluyveromyces marxianus 的应激反应和适应机制。

2区生物学

Advances in applied microbiology Pub Date : 2024-01-01 Epub Date: 2024-03-12 DOI: 10.1016/bs.aambs.2024.02.003

G Flores-Cosío, J A García-Béjar, D Sandoval-Nuñez, L Amaya-Delgado

{"title":"Stress response and adaptation mechanisms in Kluyveromyces marxianus.","authors":"G Flores-Cosío, J A García-Béjar, D Sandoval-Nuñez, L Amaya-Delgado","doi":"10.1016/bs.aambs.2024.02.003","DOIUrl":"10.1016/bs.aambs.2024.02.003","url":null,"abstract":"Kluyveromyces marxianus is a non-Saccharomyces yeast that has gained importance due to its great potential to be used in the food and biotechnology industries. In general, K. marxianus is a known yeast for its ability to assimilate hexoses and pentoses; even this yeast can grow in disaccharides such as sucrose and lactose and polysaccharides such as agave fructans. Otherwise, K. marxianus is an excellent microorganism to produce metabolites of biotechnological interest, such as enzymes, ethanol, aroma compounds, organic acids, and single-cell proteins. However, several studies highlighted the metabolic trait variations among the K. marxianus strains, suggesting genetic diversity within the species that determines its metabolic functions; this diversity can be attributed to its high adaptation capacity against stressful environments. The outstanding metabolic characteristics of K. marxianus have motivated this yeast to be a study model to evaluate its easy adaptability to several environments. This chapter will discuss overview characteristics and applications of K. marxianus and recent insights into the stress response and adaptation mechanisms used by this non-Saccharomyces yeast.","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":"126 ","pages":"27-62"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140846709","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Effects of gut bacteria and their metabolites on gut health of animals. 肠道细菌及其代谢物对动物肠道健康的影响。

2区生物学

Advances in applied microbiology Pub Date : 2024-01-01 Epub Date: 2024-03-13 DOI: 10.1016/bs.aambs.2024.02.007

Zhuang Hao, Xuedong Ding, Jing Wang

引用次数: 0

Molecular aspects of copper homeostasis in fungi. 真菌中铜平衡的分子方面。

2区生物学

Advances in applied microbiology Pub Date : 2024-01-01 Epub Date: 2024-09-04 DOI: 10.1016/bs.aambs.2024.08.001

Dayane Moraes, Mirelle Garcia Silva-Bailão, Alexandre Melo Bailão

{"title":"Molecular aspects of copper homeostasis in fungi.","authors":"Dayane Moraes, Mirelle Garcia Silva-Bailão, Alexandre Melo Bailão","doi":"10.1016/bs.aambs.2024.08.001","DOIUrl":"https://doi.org/10.1016/bs.aambs.2024.08.001","url":null,"abstract":"Copper homeostasis in fungi is a tightly regulated process crucial for cellular functions. Fungi acquire copper from their environment, with transporters facilitating its uptake into the cell. Once inside, copper is utilized in various metabolic pathways, including respiration and antioxidant defense. However, excessive copper can be toxic by promoting cell damage mainly due to oxidative stress and metal displacements. Fungi employ intricate regulatory mechanisms to maintain optimal copper levels. These involve transcription factors that control the expression of genes involved in copper transport, storage, and detoxification. Additionally, chaperone proteins assist in copper trafficking within the cell, ensuring its delivery to specific targets. Furthermore, efflux pumps help remove excess copper from the cell. Altogether, these mechanisms enable fungi to balance copper levels, ensuring proper cellular function while preventing toxicity. Understanding copper homeostasis in fungi is not only essential for fungal biology but also holds implications for various applications, including biotechnology and antifungal drug development.","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":"129 ","pages":"189-229"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142399098","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Treatment of agricultural wastewater using microalgae: A review. 利用微藻处理农业废水：综述。

2区生物学

Advances in applied microbiology Pub Date : 2024-01-01 Epub Date: 2024-06-15 DOI: 10.1016/bs.aambs.2024.05.004

Jiayi Li, Tong Li, Dongzhe Sun, Yueqiang Guan, Zhao Zhang

{"title":"Treatment of agricultural wastewater using microalgae: A review.","authors":"Jiayi Li, Tong Li, Dongzhe Sun, Yueqiang Guan, Zhao Zhang","doi":"10.1016/bs.aambs.2024.05.004","DOIUrl":"10.1016/bs.aambs.2024.05.004","url":null,"abstract":"The rapid development of agriculture has led to a large amount of wastewater, which poses a great threat to environmental safety. Microalgae, with diverse species, nutritional modes and cellular status, can adapt well in agricultural wastewater and absorb nutrients and remove pollutants effectively. Besides, after treatment of agricultural wastewater, the accumulated biomass of microalgae has broad applications, such as fertilizer and animal feed. This paper reviewed the current progresses and further perspectives of microalgae-based agricultural wastewater treatment. The characteristics of agricultural wastewater have been firstly introduced; Then the microalgal strains, cultivation modes, cellular status, contaminant metabolism, cultivation systems and biomass applications of microalgae for wastewater treatment have been summarized; At last, the bottlenecks in the development of the microalgae treatment methods, as well as recommendations for optimizing the adaptability of microalgae to wastewater in terms of wastewater pretreatment, microalgae breeding, and microalgae-bacterial symbiosis systems were discussed. This review would provide references for the future developments of microalgae-based agricultural wastewater treatment.","PeriodicalId":7298,"journal":{"name":"Advances in applied microbiology","volume":"128 ","pages":"41-82"},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141764789","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0